RPSBLAST alignment for GI: 254780917 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
 Score = 82.8 bits (204), Expect = 3e-16
 Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 18/217 (8%)

Query: 365  GHPVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDGINIRDITFSS 424
            G P +  +N+ F   ++TA +G +G+GK+T +++L  +  P+SG++ + G +I +    +
Sbjct: 942  GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDI-ETNLDA 1000

Query: 425  LRERISYVGQDVFLFSN-TVRYNILI-----GRPMATEEEMIEIAKSANAHDFIMSLPQG 478
            +R+ +    Q   LF + TV  +IL      GR  + EE  +E+          M    G
Sbjct: 1001 VRQSLGMCPQHNILFHHLTVAEHILFYAQLKGR--SWEEAQLEMEA--------MLEDTG 1050

Query: 479  YDTYVGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQALSRLMQG 538
                  E   +LSGG ++++++A A + D  ++VLDE TS +D ++   +   L +   G
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSG 1110

Query: 539  RTTIVIAHRISTI-IEADHIIFIEDGKVSESGDQKYL 574
            RT I+  H +    +  D I  I  G++  SG   +L
Sbjct: 1111 RTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFL 1147