RPSBLAST alignment for GI: 254780917 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 14/187 (7%)

Query: 367  PVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDGINIRDITFSSLR 426
            P +  + +  + G+   L+G +G+GK+T   +L      +SG   + G +I     S + 
Sbjct: 1953 PAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSIL-TNISDVH 2011

Query: 427  ERISYVGQ----DVFLFSNTVRYNILIGRPMATEEEMIEIAKSANAHDFIMSLPQGYDTY 482
            + + Y  Q    D  L      Y  L  R      E  EI K AN    I SL  G   Y
Sbjct: 2012 QNMGYCPQFDAIDDLLTGREHLY--LYARLRGVPAE--EIEKVANWS--IQSL--GLSLY 2063

Query: 483  VGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQAL-SRLMQGRTT 541
                    SGG K++++ A A++    +++LDE T+ +D     ++   + S + +GR  
Sbjct: 2064 ADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAV 2123

Query: 542  IVIAHRI 548
            ++ +H +
Sbjct: 2124 VLTSHSM 2130