RPSBLAST alignment for GI: 254780917 and conserved domain: TIGR01189
>gnl|CDD|162243 TIGR01189, ccmA, heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c. Length = 198
Score = 63.5 bits (155), Expect = 1e-10
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 365 GHPVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDGINIRDITFSS 424
+ G++ +G+ + GP+G GK+T++ +L + P SG + +G + +
Sbjct: 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DE 70
Query: 425 LRERISYVG-QDVFLFSNTVRYNILIGRPM-ATEEEMIEIAKSANAHDFIMSLPQGYDTY 482
I Y+G + N+ + + IE A +A LP
Sbjct: 71 PHRNILYLGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFEDLPAAQ--- 127
Query: 483 VGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALD 521
LS GQ++R+A+AR L + +LDE T+ALD
Sbjct: 128 -------LSAGQQRRLALARLWLSRAPLWILDEPTTALD 159