RPSBLAST alignment for GI: 254780917 and conserved domain: cd03248

>gnl|CDD|73007 cd03248, ABCC_TAP, TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.. Length = 226
 Score =  228 bits (583), Expect = 3e-60
 Identities = 100/218 (45%), Positives = 140/218 (64%), Gaps = 2/218 (0%)

Query: 350 KGTTVFRDVFFSY--KQGHPVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSS 407
           KG   F++V F+Y  +    VL  ++     G++TALVGPSGSGKST++ LL   Y P  
Sbjct: 9   KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQG 68

Query: 408 GSIEIDGINIRDITFSSLRERISYVGQDVFLFSNTVRYNILIGRPMATEEEMIEIAKSAN 467
           G + +DG  I       L  ++S VGQ+  LF+ +++ NI  G    + E + E A+ A+
Sbjct: 69  GQVLLDGKPISQYEHKYLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAH 128

Query: 468 AHDFIMSLPQGYDTYVGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENL 527
           AH FI  L  GYDT VGE GS LSGGQKQR+AIARA++R+  +L+LDEATSALD  +E  
Sbjct: 129 AHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQ 188

Query: 528 VRQALSRLMQGRTTIVIAHRISTIIEADHIIFIEDGKV 565
           V+QAL    + RT +VIAHR+ST+  AD I+ ++ G++
Sbjct: 189 VQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226