>gnl|CDD|73010 cd03251, ABCC_MsbA, MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 234

Score = 316 bits (811), Expect = 1e-86 Identities = 138/235 (58%), Positives = 173/235 (73%), Gaps = 3/235 (1%) Query: 354 VFRDVFFSY-KQGHPVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEI 412 F++V F Y G PVL I+L +G+ ALVGPSGSGKST++NL+ R YD SG I I Sbjct: 2 EFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILI 61 Query: 413 DGINIRDITFSSLRERISYVGQDVFLFSNTVRYNILIGRPMATEEEMIEIAKSANAHDFI 472 DG ++RD T +SLR +I V QDVFLF++TV NI GRP AT EE+ E A++ANAH+FI Sbjct: 62 DGHDVRDYTLASLRRQIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFI 121 Query: 473 MSLPQGYDTYVGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQAL 532 M LP+GYDT +GE G LSGGQ+QRIAIARA+L+D IL+LDEATSALDT +E LV+ AL Sbjct: 122 MELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAAL 181 Query: 533 SRLMQGRTTIVIAHRISTIIEADHIIFIEDGKVSESGDQKYLLQQKDGSLYKKMY 587 RLM+ RTT VIAHR+STI AD I+ +EDGK+ E G + LL Q G +Y K++ Sbjct: 182 ERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ--GGVYAKLH 234

RPSBLAST alignment for GI: 254780917 and conserved domain: cd03251