HHsearch alignment for GI: 254780918 and conserved domain: COG1209
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].
Probab=94.63 E-value=0.29 Score=26.04 Aligned_cols=171 Identities=16% Similarity=0.216 Sum_probs=74.4
Q ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCC-C
Q ss_conf 974758988899999999982889974899987757806799999998875798899980888856489999999659-9
Q gi|254780918|r 72 IMPVYKIKKEWLEMAIESVRSQIYSHWELCIAEDCSGDIETVSLLKKYANMDSRIKVVFRAKNGHISAASNSAAQLAT-S 150 (623)
Q Consensus 72 iip~yn~~~~~L~~~i~Si~~Qty~~~EliivdD~S~d~~~~~~l~~~~~~d~ri~~~~~~~n~g~~~a~N~~l~~a~-G 150 (623)
T Consensus 25 LlpV~~K--Pmi~y~l~~L~~aGI~--dI~II~~~~~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~~a~~fv~~~ 100 (286)
T COG1209 25 LLPVYDK--PMIYYPLETLMLAGIR--DILIVVGPEDKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVLIAEDFVGDD 100 (286)
T ss_pred CCEECCC--CHHHHHHHHHHHCCCC--EEEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 3211686--2158579999975985--69999668850566633367100386369996589876899999888645898
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHHHH-CCCCCCC-CC--C-----CEEECCCCCEEEECCCCCCCHHHHCCCCCCCHHHH
Q ss_conf 89999769875273207999999873-2475542-02--2-----20675898365422566789667414785431457
Q gi|254780918|r 151 EWLALLDHDDLLHPTALYYVADAINN-NPNAEII-YS--D-----EDKINENQIRSGPYFKYDFNPELFHVHNMITHLGV 221 (623)
Q Consensus 151 e~i~~lD~DD~l~p~~L~~~~~~l~~-~p~~~~i-Ys--D-----e~~i~~~g~~~~p~fkp~~~~~~l~s~nyi~~~~~ 221 (623)
T Consensus 101 ~f~l~L-GDNi~~~-~l~~~~~~~~~~~~ga~i~~~~V~dP~rfGV~e~d~~~~v~~l~EKP~~P----~SNlAvtGlY~ 174 (286)
T COG1209 101 DFVLYL-GDNIFQD-GLSELLEHFAEEGSGATILLYEVDDPSRYGVVEFDEDGKVIGLEEKPKEP----KSNLAVTGLYF 174 (286)
T ss_pred CEEEEE-CCCEECC-CHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCC----CCCEEEEEEEE
T ss_conf 659992-6844105-77999999852489948999984895304489986899687767889999----87626889997
Q ss_pred HHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHC
Q ss_conf 689999971887898773-0274136788642
Q gi|254780918|r 222 YRTETFKKIGGFREKFEG-AQDYDLVLRFLEN 252 (623)
Q Consensus 222 ~rr~~~~~iGgf~~~~~~-~~D~Dl~lR~~~~ 252 (623)
T Consensus 175 ~d~~Vf~~~~~ikPS~RGElEITd~i~~~i~~ 206 (286)
T COG1209 175 YDPSVFEAIKQIKPSARGELEITDAIDLYIEK 206 (286)
T ss_pred ECHHHHHHHHCCCCCCCCCEEEHHHHHHHHHC
T ss_conf 08589999871898877856752889999976