HHsearch alignment for GI: 254780918 and conserved domain: KOG3916
>KOG3916 consensus.
Probab=98.87 E-value=2.2e-08 Score=69.65 Aligned_cols=184 Identities=24% Similarity=0.361 Sum_probs=104.6
Q ss_pred CCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHH---HHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCE
Q ss_conf 577530121367888881699995377455699999876---42079751579971489981689999999863088827
Q gi|254780918|r 308 FDGAQYRTHYMIPNPPPLVSIIIPTYNHHHLLKICLESI---YHKTTYSSFEVIIIDNLSDDSKTFLYLQKIQKKYPNLR 384 (623)
Q Consensus 308 ~~~~~~r~~~~~~~~~P~VSIIIp~~n~~~~l~~cl~Sl---~~~t~y~~~EiivVdn~S~d~~t~~~l~~~~~~~~~~~ 384 (623)
T Consensus 137 ~pGG~~~P~dC--~ar~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQ-rL~y~iyVieQ~--------------------- 192 (372)
T KOG3916 137 RPGGRYRPEDC--QARHKVAIIIPFRNREEHLRYLLHHLHPFLQRQ-RLDYRIYVIEQA--------------------- 192 (372)
T ss_pred CCCCCCCCCCC--CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH-HHCEEEEEEEEC---------------------
T ss_conf 88887599778--755326999313537889999999862888864-012169999813---------------------
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCE----EEEECCCCEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEE
Q ss_conf 99757888733889898786148974----74405882782816889988774289816995376646767567787044
Q gi|254780918|r 385 VITDNTHPFNYSRINNNATLHAKGQY----FCFLNNDTEVINGQWLSEMMGIASQPQVGAVGARLWYRRKKLWKRSKRLQ 460 (623)
Q Consensus 385 ~i~~~~~~~n~s~~~N~g~~~a~gey----ilfLn~D~~v~~~~wL~~Ll~~~~~~~vG~Vg~~ll~~~~~~~~~d~~iq 460 (623)
T Consensus 193 ----g~~~FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPen-D--rNlY~C~~~PR----------------------- 242 (372)
T KOG3916 193 ----GNKPFNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPEN-D--RNLYGCPEQPR----------------------- 242 (372)
T ss_pred ----CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-C--CCCCCCCCCCC-----------------------
T ss_conf ----89762087765268999987439877998236646567-8--88367999772-----------------------
Q ss_pred ECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH
Q ss_conf 13254067865664322565555764422223344444111011020438888987179997687632316889999997
Q gi|254780918|r 461 HGGVIMGINNIAGHKNKHHKARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRILE 540 (623)
Q Consensus 461 haG~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~~~ 540 (623)
T Consensus 243 H~sva~d----------k~gy~LPY~~~FG----------GVs----alt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ 298 (372)
T KOG3916 243 HMSVALD----------KFGYRLPYKEYFG----------GVS----ALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQL 298 (372)
T ss_pred CHHHHHH----------HCCCCCCCHHHHC----------CHH----HCCHHHHHHHCCCCCHHCCCCCCCHHHHHHHHH
T ss_conf 0654342----------0254035226407----------631----356999987659970002658750279999986
Q ss_pred CCCEEE-ECC----CEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf 498199-847----549995177336776689999999
Q gi|254780918|r 541 AGYRNV-WTP----HADLYHDESRTRKYDHEDPAKMIV 573 (623)
Q Consensus 541 ~G~r~v-~~P----~a~v~H~es~srg~~~~~~~k~~~ 573 (623)
T Consensus 299 ag~~IsRp~~~igrYkMikH~-~--k~-n~~n~~Ry~l 332 (372)
T KOG3916 299 AGMKISRPPPEIGRYKMIKHH-D--KG-NEPNPGRYKL 332 (372)
T ss_pred CCCEEECCCCCCCEEEEEECC-C--CC-CCCCHHHHHH
T ss_conf 486215588764305775310-0--35-7788689999