HHsearch alignment for GI: 254780918 and conserved domain: PRK10714
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional.
Probab=99.63 E-value=1.4e-14 Score=107.61 Aligned_cols=212 Identities=15% Similarity=0.140 Sum_probs=128.5
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHCCC--CCCEEEEEECCCCCCHHHHHHHHHHHHC-CCCCEEEEECCCCCCHHH
Q ss_conf 8888169999537745569999987642079--7515799714899816899999998630-888279975788873388
Q gi|254780918|r 321 NPPPLVSIIIPTYNHHHLLKICLESIYHKTT--YSSFEVIIIDNLSDDSKTFLYLQKIQKK-YPNLRVITDNTHPFNYSR 397 (623)
Q Consensus 321 ~~~P~VSIIIp~~n~~~~l~~cl~Sl~~~t~--y~~~EiivVdn~S~d~~t~~~l~~~~~~-~~~~~~i~~~~~~~n~s~ 397 (623)
T Consensus 3 ~pmkkiSIViP~yNEe~~i~~~~~~~~~~l~~~~~~~EiI~VDDgS~D~-T~~~l~~l~~~~~~~v~~i~-lsRNfG~~~ 80 (324)
T PRK10714 3 HPIKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDN-SAEMLVEASQAEDSHIISIL-LNRNYGQHS 80 (324)
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC-HHHHHHHHHHHCCCCEEEEE-CCCCCCHHH
T ss_conf 9998699998017778779999999999998679998999998999867-79999998630599689998-988988568
Q ss_pred HHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCC
Q ss_conf 98987861489747440588278281688998877428981699537664676756778704413254067865664322
Q gi|254780918|r 398 INNNATLHAKGQYFCFLNNDTEVINGQWLSEMMGIASQPQVGAVGARLWYRRKKLWKRSKRLQHGGVIMGINNIAGHKNK 477 (623)
Q Consensus 398 ~~N~g~~~a~geyilfLn~D~~v~~~~wL~~Ll~~~~~~~vG~Vg~~ll~~~~~~~~~d~~iqhaG~v~g~~~~~~~~~~ 477 (623)
T Consensus 81 Ai~aGl~~a~Gd~vi~mD~DLQ-dpPe~Ip~li~~~~-~G~DvV~~~r~~r------~~~~~r---------~~~s~l~- 142 (324)
T PRK10714 81 AIMAGFSHVTGDLIITLDADLQ-NPPEEIPRLVAKAD-EGYDVVGTVRQNR------QDSWFR---------KTASKMI- 142 (324)
T ss_pred HHHHHHHHCCCCEEEEECCCCC-CCHHHHHHHHHHHH-CCCCEEEEEECCC------CCCHHH---------HHHHHHH-
T ss_conf 9999987347998999868887-59889999999870-4886899988888------775788---------9999999-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEEEC
Q ss_conf 56555576442222334444411101102043888898717999768763231688999999749819984754999517
Q gi|254780918|r 478 HHKARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRILEAGYRNVWTPHADLYHDE 557 (623)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~~~~G~r~v~~P~a~v~H~e 557 (623)
T Consensus 143 ----------~~l~~~~~~~~~~d~~~~frl~~r~vv~~l~~~~e~~~f~---~g----l~~~~g~~~~~i~----~~~~ 201 (324)
T PRK10714 143 ----------NRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTFI---PI----LANIFARRAIEIP----VHHA 201 (324)
T ss_pred ----------HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH---HH----HHHHCCCCEEEEE----EECC
T ss_conf ----------9999985399878753124413799999999637865069---99----9997287429998----5047
Q ss_pred CCCCCCCCCCHHHHHH
Q ss_conf 7336776689999999
Q gi|254780918|r 558 SRTRKYDHEDPAKMIV 573 (623)
Q Consensus 558 s~srg~~~~~~~k~~~ 573 (623)
T Consensus 202 ~R~~G~Sky~~~kl~~ 217 (324)
T PRK10714 202 EREFGDSKYSFMRLIN 217 (324)
T ss_pred CCCCCCCCCCHHHHHH
T ss_conf 6279988897899999