HHsearch alignment for GI: 254780918 and conserved domain: PRK11498

Probab=99.82  E-value=2.1e-18  Score=131.06  Aligned_cols=197  Identities=18%  Similarity=0.308  Sum_probs=86.6

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHHHCCCCCC--EEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
Q ss_conf             816999953774-5569999987642079751--5799714899816899999998630888279975788873388989
Q gi|254780918|r  324 PLVSIIIPTYNH-HHLLKICLESIYHKTTYSS--FEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTHPFNYSRINN  400 (623)
Q Consensus       324 P~VSIIIp~~n~-~~~l~~cl~Sl~~~t~y~~--~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~~~n~s~~~N  400 (623)
T Consensus       273 PtVDIfIPTYNEp~~vvr~Ti~aa~~-iDYP~dKl~VyvLDDG~R~-e~----r~lAeel-Gv~YitR~~N~HAKAGNLN  345 (858)
T PRK11498        273 PTVDIFVPTYNEDLNVVKNTIYASLG-IDWPKDKLNIWILDDGGRE-EF----RQFAQEV-GVGYIARPTHEHAKAGNIN  345 (858)
T ss_pred             CEEEEEEECCCCCHHHHHHHHHHHHH-CCCCHHHCEEEEECCCCCH-HH----HHHHHHH-CCCEEECCCCCCCCCCCHH
T ss_conf             71005764589988999999999982-8998011769993299998-99----9999985-9976736888666422678


Q ss_pred             HHHHHCCCCEEEEECCCCEEECHHHHHHHHHHH-CCCCEEEEE-EEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCC
Q ss_conf             878614897474405882782816889988774-289816995-376646767567787044132540678656643225
Q gi|254780918|r  401 NATLHAKGQYFCFLNNDTEVINGQWLSEMMGIA-SQPQVGAVG-ARLWYRRKKLWKRSKRLQHGGVIMGINNIAGHKNKH  478 (623)
Q Consensus       401 ~g~~~a~geyilfLn~D~~v~~~~wL~~Ll~~~-~~~~vG~Vg-~~ll~~~~~~~~~d~~iqhaG~v~g~~~~~~~~~~~  478 (623)
T Consensus       346 hAL~~T~GelVaIfDADhVP-~r~FL~rTvG~Fl~DpklalVQTPq~FyN------pDP-fqrN---Lg~~~~~P-----  409 (858)
T PRK11498        346 NALKYAKGEFVAIFDCDHVP-TRSFLQMTMGWFLKDKKLAMMQTPHHFFS------PDP-FERN---LGRFRKTP-----  409 (858)
T ss_pred             HHHHHCCCCEEEEECCCCCC-CHHHHHHHHHHHHCCCCEEEEECCCCCCC------CCH-HHHH---CCCCCCCC-----
T ss_conf             88864588789996388887-47899986687722886489868833379------982-5441---22457889-----


Q ss_pred             CCCCCCCCCCCCCCCCCCC---CCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEECCCE
Q ss_conf             6555576442222334444---411101102043888898717999768763231688999999749819984754
Q gi|254780918|r  479 HKARCSVPNYQAFAMHFTH---SISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRILEAGYRNVWTPHA  551 (623)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~---~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~~~~G~r~v~~P~a  551 (623)
T Consensus       410 -----~E~elFY~~IQ~g~D~wnAaffCGS~AVlRR~AL~eIGGfateTVT---ED~~Tal~Lh~~Gy~S~Yl~e~  477 (858)
T PRK11498        410 -----NEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVT---EDAHTSLRLHRRGYTSAYMRIP  477 (858)
T ss_pred             -----CCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEC---CCHHHHHHHHHCCCEEEECCHH
T ss_conf             -----8266788986386434570699630799979999982895464033---0088899999779807750738