HHsearch alignment for GI: 254780918 and conserved domain: cd02514
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.40 E-value=1.2e-05 Score=52.87 Aligned_cols=185 Identities=14% Similarity=0.230 Sum_probs=105.7
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCC---------CC-C
Q ss_conf 6999953774556999998764207-97515799714899816899999998630888279975788---------87-3
Q gi|254780918|r 326 VSIIIPTYNHHHLLKICLESIYHKT-TYSSFEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTH---------PF-N 394 (623)
Q Consensus 326 VSIIIp~~n~~~~l~~cl~Sl~~~t-~y~~~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~---------~~-n 394 (623)
T Consensus 2 ipVlV~a~NRp~~l~r~L~sLl~~~p~~~~~pIiVsqDg~~-~~~~~v~~~yg---~~i~~i~~~~~~~~~~~~~~k~~~ 77 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGY-EEVADVAKSFG---DGVTHIQHPPISIKNVNPPHKFQG 77 (334)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC-HHHHHHHHHHC---CEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 11899955877999999999985186678744899947998-79999999725---102789678866556675255566
Q ss_pred HHH-------HHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHH---HH-CCCCEEEEEEEEECCCCCCCCCCCEEEECC
Q ss_conf 388-------9898786148974744058827828168899887---74-289816995376646767567787044132
Q gi|254780918|r 395 YSR-------INNNATLHAKGQYFCFLNNDTEVINGQWLSEMMG---IA-SQPQVGAVGARLWYRRKKLWKRSKRLQHGG 463 (623)
Q Consensus 395 ~s~-------~~N~g~~~a~geyilfLn~D~~v~~~~wL~~Ll~---~~-~~~~vG~Vg~~ll~~~~~~~~~d~~iqhaG 463 (623)
T Consensus 78 Y~~Ia~HYk~aL~~~F~~~~~~~vIIlEDDL~v-spDFf~YF~~t~~LL~~D~sl~cISA--WN-------DnG~~~~v- 146 (334)
T cd02514 78 YYRIARHYKWALTQTFNLFGYSFVIILEDDLDI-APDFFSYFQATLPLLEEDPSLWCISA--WN-------DNGKEHFV- 146 (334)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHCCCCCEEEEEE--EC-------CCCCCCCC-
T ss_conf 899999999999998630588769999456333-57599999975687615996689973--31-------67865557-
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHH--HHC
Q ss_conf 540678656643225655557644222233444441110110204388889871799976876323168899999--974
Q gi|254780918|r 464 VIMGINNIAGHKNKHHKARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRI--LEA 541 (623)
Q Consensus 464 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~--~~~ 541 (623)
T Consensus 147 ---------~~----------~~~~-----lyRsdff--pGLGWml~r~lw~El~----pkWP~~--~WDdWmR~p~~Rk 194 (334)
T cd02514 147 ---------DD----------TPSL-----LYRTDFF--PGLGWMLTRKLWKELE----PKWPKA--FWDDWMRLPEQRK 194 (334)
T ss_pred ---------CC----------CCCC-----EEEECCC--CCHHHHHHHHHHHHHC----CCCCCC--CHHHHHCCHHHHC
T ss_conf ---------87----------6110-----2430467--7356651087897625----579987--4176650556517
Q ss_pred CCEEEECCCEEEEEEC
Q ss_conf 9819984754999517
Q gi|254780918|r 542 GYRNVWTPHADLYHDE 557 (623)
Q Consensus 542 G~r~v~~P~a~v~H~e 557 (623)
T Consensus 195 gR~cIrPEisRT~~FG 210 (334)
T cd02514 195 GRECIRPEISRTYHFG 210 (334)
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 9741256665333478