HHsearch alignment for GI: 254780918 and conserved domain: cd02525
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=100.00 E-value=2e-42 Score=278.11 Aligned_cols=235 Identities=22% Similarity=0.247 Sum_probs=165.3
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHCCCCC--CEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 16999953774556999998764207975--1579971489981689999999863088827997578887338898987
Q gi|254780918|r 325 LVSIIIPTYNHHHLLKICLESIYHKTTYS--SFEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTHPFNYSRINNNA 402 (623)
Q Consensus 325 ~VSIIIp~~n~~~~l~~cl~Sl~~~t~y~--~~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~~~n~s~~~N~g 402 (623)
T Consensus 1 lVSViIp~yN~~~~l~~~l~Sl~~q~-yp~~~~EVIvVDd~S~D-~t~~~~~~~~~~~~~i~~~~~~--~~~~~~a~N~g 76 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQS-YPKDLIEIIVVDGGSTD-GTREIVQEYAAKDPRIRLIDNP--KRIQSAGLNIG 76 (249)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC-CCCCCEEEEEEECCCCC-CHHHHHHHHHHCCCCEEECCCC--CCCHHHHHHHH
T ss_conf 98999935697899999999998468-99998899999895961-5699999997407713211355--56589999898
Q ss_pred HHHCCCCEEEEECCCCEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCC
Q ss_conf 86148974744058827828168899887742898169953766467675677870441325406786566432256555
Q gi|254780918|r 403 TLHAKGQYFCFLNNDTEVINGQWLSEMMGIASQPQVGAVGARLWYRRKKLWKRSKRLQHGGVIMGINNIAGHKNKHHKAR 482 (623)
Q Consensus 403 ~~~a~geyilfLn~D~~v~~~~wL~~Ll~~~~~~~vG~Vg~~ll~~~~~~~~~d~~iqhaG~v~g~~~~~~~~~~~~~~~ 482 (623)
T Consensus 77 i~~a~gd~i~~lD~D~~~-~~~~l~~~~~~~~~~~~~~v~g~~~~~------~~~~~~~~~-~-----~~~~~~~~~~-- 141 (249)
T cd02525 77 IRNSRGDIIIRVDAHAVY-PKDYILELVEALKRTGADNVGGPMETI------GESKFQKAI-A-----VAQSSPLGSG-- 141 (249)
T ss_pred HHHCCCCEEEEECCCCCC-CHHHHHHHHHHHHCCCCEEEEEEEEEC------CCCHHHHHH-H-----HHHHCCCCCC--
T ss_conf 996687768841477656-956999999998778971999888506------897277777-8-----8762643235--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEEECCCCCC
Q ss_conf 57644222233444441110110204388889871799976876323168899999974981998475499951773367
Q gi|254780918|r 483 CSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRILEAGYRNVWTPHADLYHDESRTRK 562 (623)
Q Consensus 483 ~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~~~~G~r~v~~P~a~v~H~es~srg 562 (623)
T Consensus 142 --~~~~---~~~~~~~~~~~~~~~~~~rr~~~~~iGgfde~-~-~~~ED~dl~~R~~~~G~ki~~~p~a~v~h~~~~s~~ 214 (249)
T cd02525 142 --GSAY---RGGAVKIGYVDTVHHGAYRREVFEKVGGFDES-L-VRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTLK 214 (249)
T ss_pred --CCCC---CCCCCCCCEECCEEEEEEEHHHHHHHCCCCCC-C-CCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCCHH
T ss_conf --2000---13224584542135798888899973899877-7-823899999999976997999188799998999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76689999999999999999883888
Q gi|254780918|r 563 YDHEDPAKMIVFQEACQYLQKRWKKI 588 (623)
Q Consensus 563 ~~~~~~~k~~~~~~~~~~~~~rW~~~ 588 (623)
T Consensus 215 --~-~~~Q~~Rw~~g~~~~~~k~~~~ 237 (249)
T cd02525 215 --K-LARQYFRYGKWRARTLRKHRKS 237 (249)
T ss_pred --H-HHHHHHHHHHHHHHHHHHCCCC
T ss_conf --9-9999999989999999974253