HHsearch alignment for GI: 254780918 and conserved domain: cd04179
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.84 E-value=2.7e-20 Score=142.60 Aligned_cols=173 Identities=16% Similarity=0.207 Sum_probs=125.4
Q ss_pred EEECCCCCCHHHHHHHHHHHHHC--CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 99747589888999999999828--8997489998775780679999999887579889998088885648999999965
Q gi|254780918|r 71 VIMPVYKIKKEWLEMAIESVRSQ--IYSHWELCIAEDCSGDIETVSLLKKYANMDSRIKVVFRAKNGHISAASNSAAQLA 148 (623)
Q Consensus 71 Iiip~yn~~~~~L~~~i~Si~~Q--ty~~~EliivdD~S~d~~~~~~l~~~~~~d~ri~~~~~~~n~g~~~a~N~~l~~a 148 (623)
T Consensus 1 IiIP~yNE-~~~i~~~l~~i~~~~~~~~~~eiiiVddgS~D-~T~~i~~~~~~~~~~~~~i~~~~n~G~g~ai~~G~~~a 78 (185)
T cd04179 1 VVIPAYNE-EENIPELVERLLAVLEEGYDYEIIVVDDGSTD-GTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAA 78 (185)
T ss_pred CEEEECCC-HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC-CHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHC
T ss_conf 69984487-88999999999987535798799999899962-07888887642330499863245777058999888752
Q ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCC------CCHHHHCCCC---CCCHH
Q ss_conf 99899997698752732079999998732475542022206758983654225667------8966741478---54314
Q gi|254780918|r 149 TSEWLALLDHDDLLHPTALYYVADAINNNPNAEIIYSDEDKINENQIRSGPYFKYD------FNPELFHVHN---MITHL 219 (623)
Q Consensus 149 ~Ge~i~~lD~DD~l~p~~L~~~~~~l~~~p~~~~iYsDe~~i~~~g~~~~p~fkp~------~~~~~l~s~n---yi~~~ 219 (623)
T Consensus 79 ~~d~i~~~D~D~~~~~~~i~~~i~~~~~~-~~d~V~gsR--~~~~~~~~~~~~r~i~~~~~~~~~~~~~~~~i~D~~~g~ 155 (185)
T cd04179 79 RGDIVVTMDADLQHPPEDIPKLLEKLLEG-GADVVIGSR--FVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGF 155 (185)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHC-CCEEEEEEE--ECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 58889992799870999999999999978-985999997--608987677558999999999999999599985699874
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 57689999971887898773027413678
Q gi|254780918|r 220 GVYRTETFKKIGGFREKFEGAQDYDLVLR 248 (623)
Q Consensus 220 ~~~rr~~~~~iGgf~~~~~~~~D~Dl~lR 248 (623)
T Consensus 156 k~~~~~~~~~i~~~~~~~~f~~~~El~i~ 184 (185)
T cd04179 156 RLFRREVLEALLSLLESNGFEFGLELLVG 184 (185)
T ss_pred EEEEHHHHHHHHCCCCCCCCEEEEEEEEC
T ss_conf 99889999987530346891873025713