HHsearch alignment for GI: 254780918 and conserved domain: cd06913

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=100.00  E-value=1.2e-31  Score=212.07  Aligned_cols=201  Identities=23%  Similarity=0.316  Sum_probs=141.0

Q ss_pred             EEEECCCCHHHHHHHHHHHHHCCCCCC-EEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE--EE---CCCCCCHHHHHHH
Q ss_conf             999537745569999987642079751-57997148998168999999986308882799--75---7888733889898
Q gi|254780918|r  328 IIIPTYNHHHLLKICLESIYHKTTYSS-FEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVI--TD---NTHPFNYSRINNN  401 (623)
Q Consensus       328 IIIp~~n~~~~l~~cl~Sl~~~t~y~~-~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i--~~---~~~~~n~s~~~N~  401 (623)
T Consensus         1 VIiP~YN~~~~l~~~l~Svl~Qt-y~~~~EiIiVDDgStD-~t~~ii~~~~~~~~~~~~~~~~~~~~~~~~~G~~~arN~   78 (219)
T cd06913           1 IILPVHNGEQWLDECLESVLQQD-FEGTLELSVFNDASTD-KSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQ   78 (219)
T ss_pred             CEECCCCCHHHHHHHHHHHHHCC-CCCCEEEEEEECCCCC-CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf             98867898899999999998488-9998999999899981-569999999986667776999823677664678999999


Q ss_pred             HHHHCCCCEEEEECCCCEEECHHHHHHHHHHHC-CCCEEEEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCC
Q ss_conf             786148974744058827828168899887742-8981699537664676756778704413254067865664322565
Q gi|254780918|r  402 ATLHAKGQYFCFLNNDTEVINGQWLSEMMGIAS-QPQVGAVGARLWYRRKKLWKRSKRLQHGGVIMGINNIAGHKNKHHK  480 (623)
Q Consensus       402 g~~~a~geyilfLn~D~~v~~~~wL~~Ll~~~~-~~~vG~Vg~~ll~~~~~~~~~d~~iqhaG~v~g~~~~~~~~~~~~~  480 (623)
T Consensus        79 gi~~A~GeyI~flDsDD-~~~p~~l~~~~~~~~~~~~-~~v~~~~~~~-----~~~~~~~~~~-------~~~~~~----  140 (219)
T cd06913          79 AIAQSSGRYLCFLDSDD-VMMPQRIRLQYEAALQHPN-SIIGCQVRRI-----PEDSTERYTR-------WINTLT----  140 (219)
T ss_pred             HHHHCCCCEEEEECCCC-CCCHHHHHHHHHHHHHCCC-CEEEEEEEEE-----CCCCCEECCC-------CCCCCC----
T ss_conf             99977888788618976-4276599999999985999-6999878996-----6998523132-------235689----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEE
Q ss_conf             555764422223344444111011020438888987179997687632316889999997498199847549995
Q gi|254780918|r  481 ARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRILEAGYRNVWTPHADLYH  555 (623)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~~~~G~r~v~~P~a~v~H  555 (623)
T Consensus       141 -----~~~~~~~-~~~~~~~~~~~~~~~~rr~~~~~~g~f~e~~~-~~~ED~~~~~r~l~~~~~i~~i~~~L~~Y  208 (219)
T cd06913         141 -----REQLLTQ-VYTSHGPTVIMPTWFCSREWFSHVGPFDEGGK-GVPEDLLFFYEHLRKGGGVYRVDRCLLLY  208 (219)
T ss_pred             -----HHHHHHH-HHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCC-CCCHHHHHHHHHHHCCCCEEEECCCEEEE
T ss_conf             -----8999998-87616983440035532999999289996578-67028999999997499699969977999