HHsearch alignment for GI: 254780918 and conserved domain: cd06915
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=94.91 E-value=0.25 Score=26.47 Aligned_cols=184 Identities=13% Similarity=0.153 Sum_probs=90.8
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 88881699995377455699999876420797515799714899816899999998630888279975788873388989
Q gi|254780918|r 321 NPPPLVSIIIPTYNHHHLLKICLESIYHKTTYSSFEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTHPFNYSRINN 400 (623)
Q Consensus 321 ~~~P~VSIIIp~~n~~~~l~~cl~Sl~~~t~y~~~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~~~n~s~~~N 400 (623)
T Consensus 19 ~PKpLl~i-----~gkpli~~~l~~l~~~-gi~--~iii~~~~~~~-~i~~~~~~~~~~~~~i~~~~e-~~~lGt~gal~ 88 (223)
T cd06915 19 LPKPLAPV-----AGRPFLEYLLEYLARQ-GIS--RIVLSVGYLAE-QIEEYFGDGYRGGIRIYYVIE-PEPLGTGGAIK 88 (223)
T ss_pred CCCCCCEE-----CCEEHHHHHHHHHHHC-CCC--EEEEEECCHHH-HHHHHHHCCCCCCCCCEEEEE-EEECCHHHHHH
T ss_conf 98311289-----9998999999999975-997--78873010234-334433102345776147886-42364688998
Q ss_pred HHHHHCCCCEEEEECCCCEEECHHHHHHHHHHHCCCC--EEEEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCC
Q ss_conf 8786148974744058827828168899887742898--16995376646767567787044132540678656643225
Q gi|254780918|r 401 NATLHAKGQYFCFLNNDTEVINGQWLSEMMGIASQPQ--VGAVGARLWYRRKKLWKRSKRLQHGGVIMGINNIAGHKNKH 478 (623)
Q Consensus 401 ~g~~~a~geyilfLn~D~~v~~~~wL~~Ll~~~~~~~--vG~Vg~~ll~~~~~~~~~d~~iqhaG~v~g~~~~~~~~~~~ 478 (623)
T Consensus 89 ~a~~~i~~~~flv~~gD~-~~~~~-l~~~~~~~~~~~~~~~l~~~~~---------~~-~~~~g~v~~d~~~~i---~~~ 153 (223)
T cd06915 89 NALPKLPEDQFLVLNGDT-YFDVD-LLALLAALRASGADATMALRRV---------PD-ASRYGNVTVDGDGRV---IAF 153 (223)
T ss_pred HHHHHCCCCCEEEECCCE-EECCC-HHHHHHHHHHCCCCEEEEEEEC---------CC-CCCCCCEEECCCCCE---EEE
T ss_conf 888636999889982771-12677-8999999985799789999989---------98-302785898797314---234
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 655557644222233444441110110204388889871799976876323168899999974981998
Q gi|254780918|r 479 HKARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRILEAGYRNVW 547 (623)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~~~~G~r~v~ 547 (623)
T Consensus 154 ~e----K~~------~~~~~--~i~~Giyi~~~~i~~~~~~---~~~~---~~~d~~~~li~~~~v~~~ 204 (223)
T cd06915 154 VE----KGP------GAAPG--LINGGVYLLRKEILAEIPA---DAFS---LEADVLPALVKRGRLYGF 204 (223)
T ss_pred EE----CCC------CCCCC--EEEEEEEEECHHHHHHHHC---CCCC---CHHHHHHHHHHCCCEEEE
T ss_conf 75----489------87668--2446389998999974142---5997---279999999834997999