HHsearch alignment for GI: 254780918 and conserved domain: pfam07507

>pfam07507 WavE WavE lipopolysaccharide synthesis. These proteins are encoded by putative wav gene clusters, which are responsible for the synthesis of the core oligosaccharide (OS) region of Vibrio cholerae lipopolysaccharide.
Probab=94.85  E-value=0.067  Score=29.94  Aligned_cols=104  Identities=14%  Similarity=0.176  Sum_probs=59.5

Q ss_pred             EEEEE--CCCCC-----CHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC-----
Q ss_conf             89997--47589-----8889999999998288997489998775780679999999887579889998088885-----
Q gi|254780918|r   69 ISVIM--PVYKI-----KKEWLEMAIESVRSQIYSHWELCIAEDCSGDIETVSLLKKYANMDSRIKVVFRAKNGH-----  136 (623)
Q Consensus        69 iSIii--p~yn~-----~~~~L~~~i~Si~~Qty~~~EliivdD~S~d~~~~~~l~~~~~~d~ri~~~~~~~n~g-----  136 (623)
T Consensus         1 IsvViQGPV~~~~~r~~~~~it~~cl~SiR~-~lP~a~IIlSTW~~~d~s~l~~Dqii~s~DPG~~~~~~-~~~~~~~N~   78 (310)
T pfam07507         1 ISVVVQGPVQAYQGREQEKGITQKCLASIRT-HLPGAEIILSTWPGQDLSGLDYDQIVISDDPGSNIVVY-DGAPQPLNN   78 (310)
T ss_pred             CEEEEECCCCCCCCCCCCCHHHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCC-CCCCCCCCH
T ss_conf             9699967755556754430589999999997-68998599970789876668834078658998663365-898775532


Q ss_pred             --HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf             --64899999996599899997698752732079999998
Q gi|254780918|r  137 --ISAASNSAAQLATSEWLALLDHDDLLHPTALYYVADAI  174 (623)
Q Consensus       137 --~~~a~N~~l~~a~Ge~i~~lD~DD~l~p~~L~~~~~~l  174 (623)
T Consensus        79 NRQIvST~aGL~~v~t~YaiKlRsD~~Lt~~~~~~i~~~~  118 (310)
T pfam07507        79 NRQIVSTLAGLKAVKTPYAIKLRSDNYLTGNGFVEIQEQY  118 (310)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCC
T ss_conf             2679999878987366013664022210540688861004