HHsearch alignment for GI: 254780918 and conserved domain: pfam11316
>pfam11316 DUF3118 Protein of unknown function (DUF3118). This bacterial family of proteins has no known function.
Probab=96.42 E-value=0.044 Score=31.02 Aligned_cols=92 Identities=15% Similarity=0.232 Sum_probs=61.2
Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH---HCCCCEE-E-EE
Q ss_conf 99998764207975157997148998168999999986308882799757888733889898786---1489747-4-40
Q gi|254780918|r 340 KICLESIYHKTTYSSFEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTHPFNYSRINNNATL---HAKGQYF-C-FL 414 (623)
Q Consensus 340 ~~cl~Sl~~~t~y~~~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~~~n~s~~~N~g~~---~a~geyi-l-fL 414 (623)
T Consensus 45 ~~~Lpsl~~Qtd-~dF~~lv~~~~~~P~~~r~RL~~L~a~~pq~~i~~~~p~~--hr~~~~~~i~~~~~~~~~~~lqfRl 121 (235)
T pfam11316 45 TICLPSLAAQTD-PDFTLLVLIGDDMPEPYRDRLEDLTADLPQFRIVFRPPGP--HREAMREAINAARGDGTDPVLQFRL 121 (235)
T ss_pred HHHHHHHHHCCC-CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCC--HHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 764027764668-9924999956868889999999986479952899618842--8999999998641689982588660
Q ss_pred CCCCEEECHHHHHHHHHHHCC
Q ss_conf 588278281688998877428
Q gi|254780918|r 415 NNDTEVINGQWLSEMMGIASQ 435 (623)
Q Consensus 415 n~D~~v~~~~wL~~Ll~~~~~ 435 (623)
T Consensus 122 DDDD-Avs~DFVarlR~~a~~ 141 (235)
T pfam11316 122 DDDD-AVSVDFVARLRRAAAD 141 (235)
T ss_pred CCCC-CHHHHHHHHHHHHHHH
T ss_conf 6863-0258999999999975