HHsearch alignment for GI: 254780918 and conserved domain: pfam11316

>pfam11316 DUF3118 Protein of unknown function (DUF3118). This bacterial family of proteins has no known function.
Probab=96.42  E-value=0.044  Score=31.02  Aligned_cols=92  Identities=15%  Similarity=0.232  Sum_probs=61.2

Q ss_pred             HHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH---HCCCCEE-E-EE
Q ss_conf             99998764207975157997148998168999999986308882799757888733889898786---1489747-4-40
Q gi|254780918|r  340 KICLESIYHKTTYSSFEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTHPFNYSRINNNATL---HAKGQYF-C-FL  414 (623)
Q Consensus       340 ~~cl~Sl~~~t~y~~~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~~~n~s~~~N~g~~---~a~geyi-l-fL  414 (623)
T Consensus        45 ~~~Lpsl~~Qtd-~dF~~lv~~~~~~P~~~r~RL~~L~a~~pq~~i~~~~p~~--hr~~~~~~i~~~~~~~~~~~lqfRl  121 (235)
T pfam11316        45 TICLPSLAAQTD-PDFTLLVLIGDDMPEPYRDRLEDLTADLPQFRIVFRPPGP--HREAMREAINAARGDGTDPVLQFRL  121 (235)
T ss_pred             HHHHHHHHHCCC-CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCC--HHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             764027764668-9924999956868889999999986479952899618842--8999999998641689982588660


Q ss_pred             CCCCEEECHHHHHHHHHHHCC
Q ss_conf             588278281688998877428
Q gi|254780918|r  415 NNDTEVINGQWLSEMMGIASQ  435 (623)
Q Consensus       415 n~D~~v~~~~wL~~Ll~~~~~  435 (623)
T Consensus       122 DDDD-Avs~DFVarlR~~a~~  141 (235)
T pfam11316       122 DDDD-AVSVDFVARLRRAAAD  141 (235)
T ss_pred             CCCC-CHHHHHHHHHHHHHHH
T ss_conf             6863-0258999999999975