Query gi|254780919|ref|YP_003065332.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 198
No_of_seqs 134 out of 2337
Neff 5.7
Searched_HMMs 33803
Date Wed Jun 1 20:44:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780919.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1upi_A DTDP-4-dehydrorhamnose 100.0 0 0 394.8 13.5 182 1-183 26-208 (225)
2 >1oi6_A PCZA361.16; epimerase, 100.0 0 0 387.1 12.5 180 1-183 6-187 (205)
3 >2c0z_A NOVW; isomerase, epime 100.0 0 0 386.3 12.6 177 1-181 15-192 (216)
4 >1ep0_A DTDP-6-deoxy-D-XYLO-4- 100.0 0 0 365.2 13.3 177 1-179 9-185 (185)
5 >1dzr_A DTDP-4-dehydrorhamnose 100.0 0 0 352.5 13.4 173 1-176 7-180 (183)
6 >2ixk_A DTDP-4-dehydrorhamnose 100.0 0 0 350.8 13.3 172 1-176 9-181 (184)
7 >1wlt_A 176AA long hypothetica 100.0 0 0 339.9 12.0 166 2-176 28-193 (196)
8 >1nxm_A DTDP-6-deoxy-D-XYLO-4- 100.0 0 0 320.9 13.8 173 1-183 16-196 (197)
9 >3ejk_A DTDP sugar isomerase; 100.0 2.7E-44 0 275.0 9.4 153 1-164 18-172 (174)
10 >2pa7_A DTDP-6-deoxy-3,4-keto- 99.9 1.2E-28 3.4E-33 185.0 3.5 136 3-156 2-137 (141)
11 >2zkl_A Capsular polysaccharid 99.9 5.8E-23 1.7E-27 152.2 7.4 118 9-144 2-120 (121)
12 >1juh_A Quercetin 2,3-dioxygen 97.2 0.0018 5.2E-08 40.2 7.6 107 12-134 3-109 (198)
13 >3c3v_A Arachin ARAH3 isoform; 96.7 0.0021 6.3E-08 39.7 4.2 112 11-138 3-116 (167)
14 >1fxz_A Glycinin G1; proglycin 96.7 0.0057 1.7E-07 37.2 6.4 115 11-140 3-119 (167)
15 >2vqa_A SLL1358 protein, MNCA; 96.6 0.0027 8.1E-08 39.1 4.4 75 49-134 33-108 (182)
16 >2qnk_A 3-hydroxyanthranilate 96.5 0.004 1.2E-07 38.1 4.9 74 47-133 19-92 (173)
17 >2d5f_A Glycinin A3B4 subunit; 96.5 0.0022 6.6E-08 39.6 3.4 106 11-132 3-110 (155)
18 >1zvf_A 3-hydroxyanthranilate 96.4 0.0039 1.1E-07 38.2 4.3 76 48-132 20-95 (155)
19 >1fi2_A Oxalate oxidase, germi 96.4 0.011 3.3E-07 35.5 6.6 105 19-136 54-159 (201)
20 >1yfu_A 3-hydroxyanthranilate- 96.3 0.0051 1.5E-07 37.5 4.4 76 48-136 42-117 (174)
21 >2o8q_A Hypothetical protein; 95.9 0.031 9.2E-07 33.0 6.6 100 17-135 23-122 (134)
22 >2e9q_A 11S globulin subunit b 95.8 0.01 3E-07 35.8 4.0 105 11-131 3-109 (166)
23 >1uij_A Beta subunit of beta c 95.8 0.0088 2.6E-07 36.2 3.6 68 48-128 40-107 (206)
24 >3fz3_A Prunin; TREE NUT aller 95.6 0.015 4.4E-07 34.9 4.1 103 12-130 4-108 (166)
25 >1fxz_A Glycinin G1; proglycin 95.6 0.036 1.1E-06 32.7 6.0 101 16-128 27-145 (309)
26 >2oa2_A BH2720 protein; 101753 95.5 0.02 5.8E-07 34.1 4.4 77 48-134 50-127 (148)
27 >1lr5_A Auxin binding protein 95.5 0.011 3.4E-07 35.5 3.1 96 14-123 20-115 (149)
28 >1vj2_A Novel manganese-contai 95.4 0.024 7.2E-07 33.6 4.7 71 41-129 49-119 (126)
29 >2ea7_A 7S globulin-1; beta ba 95.3 0.017 5E-07 34.5 3.6 98 13-128 6-107 (196)
30 >1j58_A YVRK protein; cupin, d 95.3 0.022 6.4E-07 33.9 4.1 108 13-138 3-110 (178)
31 >2cav_A Protein (canavalin); v 95.2 0.019 5.7E-07 34.2 3.5 66 48-126 39-104 (200)
32 >1dgw_A Canavalin; duplicated 94.9 0.025 7.4E-07 33.5 3.6 68 48-128 48-115 (178)
33 >3bu7_A Gentisate 1,2-dioxygen 94.4 0.035 1E-06 32.7 3.3 65 48-128 48-112 (173)
34 >2pyt_A Ethanolamine utilizati 94.3 0.041 1.2E-06 32.3 3.3 67 53-136 66-132 (133)
35 >1j58_A YVRK protein; cupin, d 94.0 0.17 5E-06 28.8 6.0 67 49-126 66-132 (150)
36 >1x82_A Glucose-6-phosphate is 93.9 0.065 1.9E-06 31.1 3.8 70 56-136 90-160 (190)
37 >1yhf_A Hypothetical protein S 93.8 0.093 2.8E-06 30.2 4.4 64 49-129 48-111 (115)
38 >2d5f_A Glycinin A3B4 subunit; 93.8 0.3 8.9E-06 27.3 7.0 109 10-130 18-147 (338)
39 >3bal_A Acetylacetone-cleaving 93.8 0.053 1.6E-06 31.7 3.1 70 49-133 54-123 (153)
40 >3h8u_A Uncharacterized conser 93.6 0.1 3E-06 30.0 4.4 69 48-131 46-115 (125)
41 >2phl_A Phaseolin; plant SEED 93.5 0.032 9.5E-07 32.9 1.7 104 12-127 5-112 (195)
42 >3d8c_A Hypoxia-inducible fact 93.4 0.27 7.9E-06 27.6 6.2 93 34-133 145-269 (274)
43 >2ozi_A Hypothetical protein R 93.4 0.083 2.4E-06 30.5 3.6 68 48-128 24-91 (98)
44 >3ht1_A REMF protein; cupin fo 93.2 0.12 3.7E-06 29.5 4.2 67 48-130 46-113 (145)
45 >1vrb_A Putative asparaginyl h 93.1 0.17 5E-06 28.7 4.9 87 36-129 137-251 (254)
46 >1zrr_A E-2/E-2' protein; nick 93.0 0.036 1.1E-06 32.6 1.2 68 49-129 88-156 (179)
47 >2phd_A Gentisate 1,2-dioxygen 92.9 0.11 3.3E-06 29.8 3.6 66 48-129 49-114 (174)
48 >3eqe_A Putative cystein deoxy 92.8 0.12 3.5E-06 29.7 3.7 79 48-133 76-155 (171)
49 >1y3t_A Hypothetical protein Y 92.5 0.22 6.6E-06 28.1 4.8 70 49-134 33-103 (172)
50 >2yu1_A JMJC domain-containing 92.4 0.26 7.8E-06 27.6 5.0 89 39-132 145-252 (273)
51 >1o4t_A Putative oxalate decar 92.3 0.18 5.2E-06 28.6 4.1 63 49-127 65-127 (133)
52 >2e9q_A 11S globulin subunit b 92.3 0.17 5.1E-06 28.7 4.0 108 9-128 35-159 (293)
53 >2opk_A Hypothetical protein; 92.2 0.22 6.5E-06 28.1 4.4 65 51-129 42-106 (112)
54 >3es1_A Cupin 2, conserved bar 92.2 0.21 6.1E-06 28.3 4.2 67 48-131 46-113 (132)
55 >3c3v_A Arachin ARAH3 isoform; 92.1 0.39 1.1E-05 26.7 5.6 107 9-128 20-158 (343)
56 >3cjx_A Protein of unknown fun 92.0 0.081 2.4E-06 30.6 2.0 59 48-124 50-108 (165)
57 >2ozj_A Cupin 2, conserved bar 92.0 0.16 4.7E-06 28.9 3.5 63 49-128 46-108 (114)
58 >3kv9_A JMJC domain-containing 91.9 0.3 8.7E-06 27.4 4.7 91 39-134 132-241 (260)
59 >3kv5_D JMJC domain-containing 91.9 0.3 8.7E-06 27.4 4.7 91 39-134 132-241 (260)
60 >3ibm_A Cupin 2, conserved bar 91.6 0.24 7.2E-06 27.8 4.1 65 49-130 64-128 (167)
61 >2fqp_A Hypothetical protein B 91.3 0.36 1.1E-05 26.9 4.7 71 41-126 19-89 (97)
62 >2i45_A Hypothetical protein; 91.2 0.22 6.4E-06 28.1 3.5 65 48-127 34-98 (107)
63 >2q30_A Uncharacterized protei 91.1 0.52 1.5E-05 26.0 5.4 64 49-126 41-104 (110)
64 >1y9q_A Transcriptional regula 91.1 0.58 1.7E-05 25.7 5.6 65 49-128 36-100 (116)
65 >3fjs_A Uncharacterized protei 91.1 0.48 1.4E-05 26.2 5.2 63 49-128 44-106 (114)
66 >2pfw_A Cupin 2, conserved bar 91.0 0.34 9.9E-06 27.0 4.3 64 49-130 42-105 (116)
67 >3kgz_A Cupin 2 conserved barr 90.9 0.31 9.1E-06 27.3 4.1 63 49-128 52-114 (156)
68 >1sef_A Conserved hypothetical 90.8 0.27 7.9E-06 27.6 3.7 67 49-130 31-97 (121)
69 >3jzv_A Uncharacterized protei 90.7 0.37 1.1E-05 26.8 4.3 62 48-126 60-121 (166)
70 >2o1q_A Putative acetyl/propio 90.5 0.13 4E-06 29.3 1.9 63 46-129 49-111 (145)
71 >2gu9_A Tetracenomycin polyket 90.2 0.47 1.4E-05 26.2 4.5 70 49-132 29-98 (113)
72 >2bnm_A Epoxidase; oxidoreduct 90.1 0.3 8.8E-06 27.3 3.4 56 64-128 63-118 (122)
73 >3k3o_A PHF8, PHD finger prote 90.0 0.33 9.6E-06 27.1 3.6 86 39-129 146-250 (274)
74 >1v70_A Probable antibiotics s 89.9 0.48 1.4E-05 26.1 4.3 64 49-128 36-99 (105)
75 >2d40_A Z3393, putative gentis 89.3 0.39 1.1E-05 26.7 3.5 63 49-127 37-99 (158)
76 >3kv4_A PHD finger protein 8; 89.0 0.93 2.7E-05 24.5 5.2 84 40-128 158-260 (285)
77 >2q1z_B Anti-sigma factor CHRR 89.0 0.3 8.8E-06 27.3 2.7 61 48-129 132-192 (195)
78 >1sq4_A GLXB, glyoxylate-induc 88.3 0.51 1.5E-05 26.0 3.5 73 49-136 33-105 (120)
79 >3h7j_A Bacilysin biosynthesis 87.7 0.85 2.5E-05 24.7 4.3 64 48-128 28-92 (109)
80 >3k2o_A Bifunctional arginine 87.2 1.1 3.3E-05 24.1 4.7 34 92-127 254-287 (292)
81 >1sfn_A Conserved hypothetical 87.2 0.53 1.6E-05 25.9 3.0 64 49-131 32-95 (113)
82 >2b8m_A Hypothetical protein M 87.1 0.66 2E-05 25.4 3.5 72 48-135 34-106 (117)
83 >1rc6_A Hypothetical protein Y 87.0 0.84 2.5E-05 24.7 4.0 61 49-124 30-90 (122)
84 >2vpv_A Protein MIF2, MIF2P; n 86.7 0.72 2.1E-05 25.1 3.5 65 49-128 96-160 (166)
85 >3ebr_A Uncharacterized RMLC-l 86.7 0.61 1.8E-05 25.6 3.1 61 49-128 50-111 (159)
86 >3dxt_A JMJC domain-containing 86.6 1.3 3.9E-05 23.6 4.8 100 27-131 162-297 (314)
87 >3d82_A Cupin 2, conserved bar 85.8 0.8 2.4E-05 24.9 3.4 61 49-125 37-97 (102)
88 >3cew_A Uncharacterized cupin 85.0 1.1 3.1E-05 24.2 3.7 95 13-129 4-99 (125)
89 >1juh_A Quercetin 2,3-dioxygen 83.2 1.7 4.9E-05 23.1 4.1 72 69-152 78-152 (152)
90 >1vr3_A Acireductone dioxygena 82.0 1.3 3.7E-05 23.8 3.1 56 62-125 101-156 (191)
91 >3l2h_A Putative sugar phospha 81.6 2.6 7.6E-05 22.0 4.5 62 49-126 54-117 (162)
92 >2f4p_A Hypothetical protein T 81.5 2.2 6.5E-05 22.4 4.2 63 48-126 55-117 (147)
93 >2arc_A ARAC, arabinose operon 78.7 2.3 6.7E-05 22.3 3.5 61 49-126 26-86 (164)
94 >2ea7_A 7S globulin-1; beta ba 70.2 5.2 0.00015 20.2 3.6 111 12-135 45-166 (238)
95 >2ox0_A JMJC domain-containing 67.3 9.3 0.00028 18.7 6.2 40 92-133 278-317 (381)
96 >2ece_A 462AA long hypothetica 67.2 1.2 3.6E-05 23.8 -0.2 53 77-138 20-85 (188)
97 >1xe7_A YML079WP, hypothetical 66.5 8.5 0.00025 19.0 4.0 108 17-135 44-173 (203)
98 >1znp_A Hypothetical protein A 59.1 13 0.00039 17.8 4.8 108 17-138 21-133 (154)
99 >1pmi_A PMI, phosphomannose is 56.8 14 0.00041 17.7 3.7 53 81-137 149-209 (334)
100 >2phl_A Phaseolin; plant SEED 52.2 17 0.00052 17.2 6.3 110 10-135 23-134 (202)
101 >1o5u_A Novel thermotoga marit 52.0 13 0.00039 17.9 3.0 51 64-127 48-98 (101)
102 >1yud_A Hypothetical protein S 48.9 20 0.00058 16.9 4.8 107 17-136 28-140 (170)
103 >2bdr_A Ureidoglycolate hydrol 44.4 19 0.00057 16.9 2.8 73 52-129 69-141 (175)
104 >3bcw_A Uncharacterized protei 42.8 23 0.00068 16.5 3.0 52 64-128 67-118 (123)
105 >3i7d_A Sugar phosphate isomer 36.9 31 0.00091 15.8 3.5 60 49-124 51-113 (163)
106 >2vqa_A SLL1358 protein, MNCA; 35.5 32 0.00095 15.6 6.0 87 35-134 48-136 (179)
107 >2wfp_A Mannose-6-phosphate is 31.9 37 0.0011 15.3 3.1 35 95-132 154-188 (214)
108 >1dgw_X Canavalin; duplicated 30.4 22 0.00064 16.6 1.3 63 13-83 12-75 (79)
No 1
>>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} (A:)
Probab=100.00 E-value=0 Score=394.84 Aligned_cols=182 Identities=31% Similarity=0.585 Sum_probs=175.1
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf 965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI 79 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv 79 (198)
++|+||++++++.|.|+||+|.|+|+.+++.++ +.++.++|+|+|+| ++||+||||+|.+|++|+|+++|++|+|++|
T Consensus 26 ~~I~Gv~ii~~~~~~D~RG~f~e~f~~~~~~~~~~~~~~~~q~~~s~s-~~G~iRGlH~h~~p~~q~klv~ci~G~i~~v 104 (225)
T 1upi_A 26 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVS-SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDV 104 (225)
T ss_dssp CSSTTEEEEECCEEEETTEEEECSCCHHHHHHHHSSCCCCCEEEEEEE-CTTBEEEEEEECTTTCCCEEEEEEESEEEEE
T ss_pred CCCCCEEEEECCCEECCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHH-HHHHEEEEEEECCCCHHHHHEEEEEEEEEEE
T ss_conf 648966999793167889485685147899986199864023333222-2333054577316511343100100048999
Q ss_pred HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r 80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159 (198)
Q Consensus 80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~ 159 (198)
+||+|++|||||+|..++|+++++++||||+||||||++|+|+++++|++|.+|+|++|.+|+|+||+|+|+||++....
T Consensus 105 ~vD~R~~SpTfG~~~~~~l~~~~~~~l~IP~G~aHgf~~lsd~a~lly~~s~~ydp~~e~~i~~~Dp~l~i~Wp~~~~~~ 184 (225)
T 1upi_A 105 VVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLXSAEYNPQREHTIXATDPTLAVDWPLVDGAA 184 (225)
T ss_dssp EECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEEESSCCCTTTEEECCTTCTTTCCCCCCSTTCC
T ss_pred EEECCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCHHCCCCCCCCCCCC
T ss_conf 98403575538807899830366414896389679998606865678856875181347234489800097899989878
Q ss_pred CEECHHHHCCCCHHHCCCCCEECC
Q ss_conf 301678845998778185512356
Q gi|254780919|r 160 PSVSEKDQNLPFLNQIDSPFEYDG 183 (198)
Q Consensus 160 piiS~kD~~~p~l~d~~~~f~~~~ 183 (198)
|||||||+++|.|+|+.++|.+..
T Consensus 185 ~iiS~kD~~~p~l~~~~~~~~~p~ 208 (225)
T 1upi_A 185 PSLSDRDAAAPSFEDVRASGLLPR 208 (225)
T ss_dssp CBCCHHHHTCCCHHHHHHTTCSCB
T ss_pred CEECHHHCCCCCHHHHHHCCCCCC
T ss_conf 687889929999899976699998
No 2
>>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} (A:)
Probab=100.00 E-value=0 Score=387.15 Aligned_cols=180 Identities=27% Similarity=0.451 Sum_probs=172.1
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHCC--CCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHH
Q ss_conf 9657539970762203795042110889898679--98741344233125200000001555554401210000222223
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELG--LQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFD 78 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~--~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~d 78 (198)
++|+||++++++.|.|+||+|.|+|+.+++.+.+ .++.++|+|+|+| ++||+||||+|..|++|+|+++|++|+|++
T Consensus 6 t~I~Gv~ii~~~~~~D~RG~f~e~~~~~~~~~~~~~~~~~~~q~~~s~s-~~GviRG~H~h~~~~~q~klv~~i~G~i~~ 84 (205)
T 1oi6_A 6 LAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMS-KRGVVRGIHYTVTPPGTAKYVYCARGKAMD 84 (205)
T ss_dssp CSSTTCEEEECCCEEETTEEEECSCBHHHHHHHHSSCCCCCCEEEEEEE-CTTBEEEEEEECTTTCCCEEEEEEESCEEE
T ss_pred CCCCCEEEEECCCEECCCCCEEEEECHHHHHHHCCCCCCCEEEEEEEEC-CCCEEEEEEECCCCCCHHHEEEEECEEEEE
T ss_conf 5589659998983285991878887589999851899876368999873-598899987426666724347870349999
Q ss_pred HHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCC
Q ss_conf 43340642133310011366236530233302322034530745338972178767101702168880117747888767
Q gi|254780919|r 79 IAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTI 158 (198)
Q Consensus 79 vvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~ 158 (198)
|+||+|++|||||+|..++|+++++++|+||+||||||++|+|+++++|+++.+|+|++|.+++|+||.|+|+||++.+
T Consensus 85 v~vD~R~~SpT~G~~~~~~ls~~~~~~l~IP~G~aHgf~~lsd~~~l~y~~s~~y~p~~e~~i~~~Dp~l~i~Wp~~~~- 163 (205)
T 1oi6_A 85 IVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQDELALSALDPALGLPIDIGVE- 163 (205)
T ss_dssp EEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEEESSCCCGGGEEECCTTCTTTCCSCCCSSC-
T ss_pred EEEECCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCC-
T ss_conf 9860336899665478887236887669957998579997066455688618756845662765798665867799998-
Q ss_pred CCEECHHHHCCCCHHHCCCCCEECC
Q ss_conf 6301678845998778185512356
Q gi|254780919|r 159 LPSVSEKDQNLPFLNQIDSPFEYDG 183 (198)
Q Consensus 159 ~piiS~kD~~~p~l~d~~~~f~~~~ 183 (198)
||||+||+++|.|+|++++|.|..
T Consensus 164 -~ilS~kD~~~p~l~~~~~~~~~p~ 187 (205)
T 1oi6_A 164 -PIVSDRDRVAITLAEAQRQGLLPD 187 (205)
T ss_dssp -CBCCHHHHTCCCHHHHHHTTCSCB
T ss_pred -CEECHHHCCCCCHHHHHHCCCCCC
T ss_conf -678789928999899986599998
No 3
>>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} (A:)
Probab=100.00 E-value=0 Score=386.31 Aligned_cols=177 Identities=31% Similarity=0.545 Sum_probs=171.6
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf 965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI 79 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv 79 (198)
++|+||++++++.|.|+||+|.|+|+.+++.++ +.++.++|+|+|+| ++||+||||+|..|++|+|+|+|++|+|++|
T Consensus 15 ~~I~Gv~ii~~~~~~D~RG~f~e~~~~~~~~~~~~~~~~~~q~~~s~s-~~GviRG~H~~~~~~~q~klv~vi~G~i~~v 93 (216)
T 2c0z_A 15 LGIEGVWEITPEQRADPRGVFLDWYHVDRFAEAIGRPLRLAQANLSVS-VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDV 93 (216)
T ss_dssp CSSTTEEEEECEEEEETTEEEEECCCHHHHHHHHSSCCCCCEEEEEEE-ETTBEEEEEEECTTTCCCEEEEEEESEEEEE
T ss_pred CCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHCCCCCCCEEEEEEC-CHHHHHHHHHCCCCCCCCEEEEEEECEEEEE
T ss_conf 407976999798218899298877669999997599865305676311-1455543332357643003454541216888
Q ss_pred HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r 80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159 (198)
Q Consensus 80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~ 159 (198)
+||+|++|||||+|..++|+++++++|+||+||||||++|+|+++++|++|.+|+|++|.+|+|+||.|+|+||+.+
T Consensus 94 ~vD~R~~SpT~G~~~~~~L~~~~~~~l~IP~GvaHgf~~lsdd~~~~y~~s~~y~p~~e~~i~~~Dp~l~i~Wp~~~--- 170 (216)
T 2c0z_A 94 VVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCYLSSGTYDPATEHGVHPLDPELAIDWPTGT--- 170 (216)
T ss_dssp EEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCTTTEEEBCTTCTTTCCCCSCSS---
T ss_pred EEECCCCCCCCCEEEEEECCCCCCCEEEECHHHEEHHHHCCHHHEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCC---
T ss_conf 86213567625424552042233423660231300111136334035641565574565036689820099999998---
Q ss_pred CEECHHHHCCCCHHHCCCCCEE
Q ss_conf 3016788459987781855123
Q gi|254780919|r 160 PSVSEKDQNLPFLNQIDSPFEY 181 (198)
Q Consensus 160 piiS~kD~~~p~l~d~~~~f~~ 181 (198)
|||||||+++|.|+|++++|+|
T Consensus 171 ~ilS~kD~~~p~l~~~~~~~~~ 192 (216)
T 2c0z_A 171 PLLSPRDQDALLLAEARDAGLL 192 (216)
T ss_dssp CBCCHHHHTCBCHHHHHHTTCS
T ss_pred CEECHHHHCCCCHHHHHHCCCC
T ss_conf 8808889289997999866999
No 4
>>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} (A:)
Probab=100.00 E-value=0 Score=365.17 Aligned_cols=177 Identities=44% Similarity=0.743 Sum_probs=170.8
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHH
Q ss_conf 96575399707622037950421108898986799874134423312520000000155555440121000022222343
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA 80 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvv 80 (198)
++|+||++++++.|.|+||+|.|+|+.+++.+.|+++.|+|+|+|+| ++||+||+|+|.++ .|+|+++|++|+|++|+
T Consensus 9 ~~I~gv~ii~~~~~~D~RG~~~e~~r~~~~~~~g~~~~~~q~~~s~s-~~g~vRG~H~h~~~-~q~klv~~i~G~i~~vl 86 (185)
T 1ep0_A 9 TSLDGAIIIEPEVYTDERGYFMETFNEAIFQENGLEVRFVQDNESMS-VRGVLRGLHFQREK-PQGKLVRVIRGEIFDVA 86 (185)
T ss_dssp CSSTTCEEEEECEEEETTEEEECCCCHHHHHHTTCCCCCCEEEEEEE-ETTBEEEEEEESSS-CCCEEEEEEESEEEEEE
T ss_pred CCCCCEEEEECCEECCCCCCEEEECCHHHHHHCCCCCCCEEEEEEEC-CCCEEEEEEECCCC-CCCEEEEEECCEEEEEE
T ss_conf 68998599879566329968865315588997199998138988724-78888999852899-86369998305399999
Q ss_pred HHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 34064213331001136623653023330232203453074533897217876710170216888011774788876763
Q gi|254780919|r 81 VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP 160 (198)
Q Consensus 81 vDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~p 160 (198)
||+|++|||||++..++|+++++++|+||+||||||++|+|+++++|+++..|+|+.+.+++|+||.|+|+||++....|
T Consensus 87 vD~R~~SpT~g~~~~~~l~~~~~~~l~IPpGv~Hg~~~l~dd~~~~y~~~~~y~p~~~~~i~~~dp~l~i~Wp~~~~~~~ 166 (185)
T 1ep0_A 87 VDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCTELYHPEYDSGIPWDDPDIGIDWPLEMVDDL 166 (185)
T ss_dssp EECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGEEECCTTCTTTCCCCCGGGCSSC
T ss_pred EECCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999959988589999778788789958974478998278629999569860843221668989432877889998876
Q ss_pred EECHHHHCCCCHHHCCCCC
Q ss_conf 0167884599877818551
Q gi|254780919|r 161 SVSEKDQNLPFLNQIDSPF 179 (198)
Q Consensus 161 iiS~kD~~~p~l~d~~~~f 179 (198)
||||||+++|.|+|+..+|
T Consensus 167 ils~~D~~~p~~~~~~~~f 185 (185)
T 1ep0_A 167 IISEKDRNWKPLRENPVYL 185 (185)
T ss_dssp BCCHHHHTCCCTTTSCCCC
T ss_pred EECHHHCCCCCHHHCCCCC
T ss_conf 8688991899947752439
No 5
>>1dzr_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, 3, 5-hexulose epimerase; 2.17A {Salmonella typhimurium} (A:)
Probab=100.00 E-value=0 Score=352.53 Aligned_cols=173 Identities=47% Similarity=0.862 Sum_probs=166.1
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf 965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI 79 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv 79 (198)
++|+||++++++.|.|+||+|.|+|+.+++.++ +.++.++|+++|.| ++||+||+|+|..++.|+|+++|++|++++|
T Consensus 7 ~~I~gv~i~~~~~~~D~RG~~~e~~~~~~~~~~~~~~~~~~~~~~s~s-~~gviRG~H~h~~~~~q~k~~~~i~G~i~~v 85 (183)
T 1dzr_A 7 TAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKS-KKNVLRGLHFQRGENAQGKLVRCAVGEVFDV 85 (183)
T ss_dssp CSSTTCEEEECCEEEETTEEEEEEEEHHHHHHHHSSCCCCCEEEEEEE-ETTBEEEEEEECGGGCCCEEEEEEESEEEEE
T ss_pred CCCCCEEEEECCEECCCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEC-CCCCEEEEEEECCCCCCEEEEEEEECEEEEE
T ss_conf 558986999697273398588776158999870099998778888875-7981899998569998227999975539999
Q ss_pred HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r 80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159 (198)
Q Consensus 80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~ 159 (198)
+||+|++|||||++..++|+++++++|+||+|+||||++|+++++++|+++..|+|+++.+++|+||.|+|+||++.+
T Consensus 86 ~vD~R~~SpT~g~~~~~~l~~~~~~~l~IP~G~aHg~~~lsd~~~~l~~~~~~y~~~~~~~i~~~dp~l~i~Wp~~~~-- 163 (183)
T 1dzr_A 86 AVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQL-- 163 (183)
T ss_dssp EEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCTTTEEECCTTCTTTTCCCCCSSC--
T ss_pred EEECCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 982889949998589999778788779958862688998379739999579872854423706999553889899997--
Q ss_pred CEECHHHHCCCCHHHCC
Q ss_conf 30167884599877818
Q gi|254780919|r 160 PSVSEKDQNLPFLNQID 176 (198)
Q Consensus 160 piiS~kD~~~p~l~d~~ 176 (198)
||||+||+++|.|+|+.
T Consensus 164 ~~~S~~D~~~~~l~~~~ 180 (183)
T 1dzr_A 164 PELSAKDAAAPLLDQAL 180 (183)
T ss_dssp CBCCHHHHTCCCGGGSC
T ss_pred CEECHHHHCCCCHHHHH
T ss_conf 43078893799878954
No 6
>>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A* (A:)
Probab=100.00 E-value=0 Score=350.77 Aligned_cols=172 Identities=46% Similarity=0.827 Sum_probs=163.8
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf 965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI 79 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv 79 (198)
++|+||++++++.|.|+||+|.|+|+.+++.++ +.++.++|+|+|.+ ++||+||+|+|.+. .|+|+++|++|+|.+|
T Consensus 9 ~~I~gv~ii~~~~~~D~RG~f~e~~~~~~~~~~~~~~~~~~~~~~s~s-~~g~iRG~H~h~~~-~q~kl~~~i~G~i~~v 86 (184)
T 2ixk_A 9 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRS-ARGVLRGLHYQIRQ-AQGKLVRATLGEVFDV 86 (184)
T ss_dssp CSSTTSEEEECCEEEETTEEEEEEEEHHHHHHHHSSCCCCCEEEEEEE-ETTBEEEEEEESSS-CCCEEEEEEESEEEEE
T ss_pred CCCCCEEEEECCCEECCCCCEEEEEEHHHHHHHHCCCCCCCCEEEEEE-CCCCEEEEEECCCC-HHHEEECCEEEEEEEE
T ss_conf 689977999798466499458887313578985298743213369980-45735788972330-2000002203688999
Q ss_pred HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r 80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159 (198)
Q Consensus 80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~ 159 (198)
+||+|++|||||++..++|+++++++|+||+|+||||++|+++++++|+++..|+|++|.+++|+||.|+|+||++.+
T Consensus 87 ~vD~R~~SpT~G~~~~~~l~~~~~~~l~IPpG~aHg~~~l~~d~~l~y~~s~~y~p~~e~~i~~~Dp~l~i~Wp~~~~-- 164 (184)
T 2ixk_A 87 AVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDA-- 164 (184)
T ss_dssp EEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGEEEBCTTCTTTCCCCCCSSC--
T ss_pred EEECCCCCCCCCCEEEEEECCCCCCEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCC--
T ss_conf 841346899788566665125676279956981789885389049991455666803552564899310888999997--
Q ss_pred CEECHHHHCCCCHHHCC
Q ss_conf 30167884599877818
Q gi|254780919|r 160 PSVSEKDQNLPFLNQID 176 (198)
Q Consensus 160 piiS~kD~~~p~l~d~~ 176 (198)
||||+||+++|+|+|++
T Consensus 165 ~ils~kD~~~~~~~~~~ 181 (184)
T 2ixk_A 165 PLLSEKDRQGKAFADAD 181 (184)
T ss_dssp CBCCHHHHTCBCGGGSC
T ss_pred CEECHHHCCCCCHHHCC
T ss_conf 55568894998835446
No 7
>>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} (A:)
Probab=100.00 E-value=0 Score=339.86 Aligned_cols=166 Identities=34% Similarity=0.587 Sum_probs=160.6
Q ss_pred CCCCEEEEECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHH
Q ss_conf 65753997076220379504211088989867998741344233125200000001555554401210000222223433
Q gi|254780919|r 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAV 81 (198)
Q Consensus 2 ~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvv 81 (198)
.|+||++++++.|.|+||+|.|+|+.+++.+++ .+.|+|+|+|.| ++||+||+|+|..+++|+|+++|++|+|++|+|
T Consensus 28 ~i~gv~ii~~~~~~D~RG~l~e~~~~~~~~~~~-~~~~~qv~~s~s-~~GviRG~H~h~~~~~q~k~~~v~~G~v~~vlv 105 (196)
T 1wlt_A 28 LGMGIILIKPKVFPDKRGFFLEVFKSEDFTKMR-IPNVIQTNMSFS-RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAV 105 (196)
T ss_dssp EETTEEEEEECCEEETTEEEEEEEEHHHHHHTT-CCCEEEEEEEEE-CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEE
T ss_pred CCCEEEEEECCCEECCCCCEEEEECHHHHHHCC-CCCEEEEEEEEC-CHHEEEEEEECCCCCCCEEEEEEECCCEEEEEE
T ss_conf 875799998982276985288982345898728-985599774350-301688745422357750799982583699997
Q ss_pred HCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 40642133310011366236530233302322034530745338972178767101702168880117747888767630
Q gi|254780919|r 82 DIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPS 161 (198)
Q Consensus 82 DlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~pi 161 (198)
|+|++|||||++..++|+++++++|+||+||||||++++++++++|+++..|+|+.+.+++|+||.++|+|| |
T Consensus 106 D~R~~SPT~g~~~~~~l~~~~~~~l~IPpGv~Hg~~~l~~~~~l~~~~~~~y~p~~~~~i~~~dp~~~i~Wp-------i 178 (196)
T 1wlt_A 106 DVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYFITHNEYSPPHERCISYSYIDWPIKEV-------I 178 (196)
T ss_dssp ECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEEEESSCCCGGGEEECCGGGSCCSCSSC-------B
T ss_pred EECCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCCCHHCCEECCCCCCCCCCCC-------E
T ss_conf 613689951013455321453446997531636776326320589862851281013556358827999988-------9
Q ss_pred ECHHHHCCCCHHHCC
Q ss_conf 167884599877818
Q gi|254780919|r 162 VSEKDQNLPFLNQID 176 (198)
Q Consensus 162 iS~kD~~~p~l~d~~ 176 (198)
|||||+++|.|+|++
T Consensus 179 ~s~~D~~~~~l~~~~ 193 (196)
T 1wlt_A 179 ISDKDLQCPSLEKAE 193 (196)
T ss_dssp CCHHHHTCCCTTTSC
T ss_pred ECHHHCCCCCHHHCC
T ss_conf 998791999935514
No 8
>>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} (A:)
Probab=100.00 E-value=0 Score=320.93 Aligned_cols=173 Identities=30% Similarity=0.511 Sum_probs=156.6
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHCCC-----CCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHH
Q ss_conf 96575399707622037950421108898986799-----8741344233125200000001555554401210000222
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-----QDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGR 75 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~-----~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~ 75 (198)
++|+||++++++.|.|+||+|.|+|+.+++.+++. ...++|.|+|.| ++||+||+|+|. .|.|+++|+.|+
T Consensus 16 ~~I~Gv~ii~~~~~~D~RG~f~e~~~~~~~~~~~~~~~~~~~~~~q~~~s~s-~~gviRG~H~h~---~~~~~~~~~~G~ 91 (197)
T 1nxm_A 16 EAIPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLHAEP---WDKYISVADGGK 91 (197)
T ss_dssp TTSTTCEEEECCEEEETTEEEEEEEEHHHHTTTTCCGGGGTTCCCEEEEEEE-ETTBEEEEEECS---SCEEEEECSSCC
T ss_pred CCCCCCEEEECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCEEEEEEEEE-CCCEEEEEEECC---CEEEEEEEECCC
T ss_conf 8389628997985175991895731457898708984213131057778860-487799996077---507999971572
Q ss_pred HHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHH---CEECCCCCCCCCCCC
Q ss_conf 22343340642133310011366236530233302322034530745338972178767101---702168880117747
Q gi|254780919|r 76 IFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEH---DSGVAWQDKSIDITW 152 (198)
Q Consensus 76 I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~---e~~i~~~Dp~l~i~W 152 (198)
+.+|++| |++|||||+|..+.|+. +++|+||+|+||||++|+++++++|++|+.|+|++ |.+|+|+||.|+|+|
T Consensus 92 ~~vvl~D-~r~SpT~g~~~~~~l~~--~~~l~IP~G~~Hgf~~ls~~a~ll~~~s~~y~p~d~~~e~~i~~~Dp~l~i~W 168 (197)
T 1nxm_A 92 VLGTWVD-LREGETFGNTYQTVIDA--SKSIFVPRGVANGFQVLSDFVAYSYLVNDYWALELKPKYAFVNYADPSLDIKW 168 (197)
T ss_dssp EEEEEEE-CBSSTTTTCEEEEEECT--TEEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGGGGCEECCTTCTTSSCCC
T ss_pred EEEEEEE-ECCCCCCCCEEEEEECC--CCEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 3889998-41665357177888427--84589469860689870310277788367748334687235638994248899
Q ss_pred CCCCCCCCEECHHHHCCCCHHHCCCCCEECC
Q ss_conf 8887676301678845998778185512356
Q gi|254780919|r 153 PLLDTILPSVSEKDQNLPFLNQIDSPFEYDG 183 (198)
Q Consensus 153 p~~~~~~piiS~kD~~~p~l~d~~~~f~~~~ 183 (198)
|+..+ |+||+||+++|.|+|++ +|.|+.
T Consensus 169 p~~~~--~~~S~~D~~~~~l~~~~-~~~~~~ 196 (197)
T 1nxm_A 169 ENLEE--AEVSEADENHPFLKDVK-PLRKED 196 (197)
T ss_dssp SCSTT--CBCCHHHHTSCCGGGCC-CBCGGG
T ss_pred CCCCC--CEECHHHCCCCCHHHCC-CCCCCC
T ss_conf 99997--88858891899968875-756456
No 9
>>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp} (A:)
Probab=100.00 E-value=2.7e-44 Score=275.03 Aligned_cols=153 Identities=15% Similarity=0.086 Sum_probs=140.0
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHH
Q ss_conf 96575399707622037950421108898986799874134423312520000000155555440121000022222343
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA 80 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvv 80 (198)
++|+||++++++.|.|+||+|.|.|+.+.+. ...+.|.|+|.+ ++||+||+|+|.. |.|+++|++|++.+|+
T Consensus 18 ~~i~Gv~~~~~~~~~D~RG~l~e~~~~~~~~----~~~~~q~~is~~-~~g~iRG~H~H~~---~~~~~~vi~G~~~~v~ 89 (174)
T 3ejk_A 18 LPVEGAQLSELRQIPAEGGPVLHXLRLDSPQ----FSQFGEIYFSEV-LPRRVKAWKRHSL---XTQLFAVPVGCIHVVL 89 (174)
T ss_dssp CSSTTCEEEECCEECCTTSCEECCCCTTCTT----CCCCCEEEEEEE-CBTCEEEEEEESS---CCEEEEEEESEEEEEE
T ss_pred EECCCEEEECCCEEECCCEEEEEEEECCCHH----HCCCCEEEEEEE-ECCCCCCCCCCCC---CCEEEEEEEEEEEEEE
T ss_conf 7539969962864884998699974313023----357885999995-0890603372565---3218998540599999
Q ss_pred HHCCCCHHHHHHEEEEEEEC-CCCCEEEECCCCCEEEEEECCC-CEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCC
Q ss_conf 34064213331001136623-6530233302322034530745-338972178767101702168880117747888767
Q gi|254780919|r 81 VDIRRNSPTYGCWVSLEISA-NNGLQIYIPTGFAHGFMTLEMN-TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTI 158 (198)
Q Consensus 81 vDlR~~SpTfgk~~~~~Ls~-~~~~~l~IP~G~aHGf~~L~d~-~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~ 158 (198)
+|+|++|||||++..+++.. +++++|+||+|+||||++++++ ++++|+++..|+|+++.+++|+||.|+|+||+++
T Consensus 90 vD~r~~Spt~g~~~~~~~~~~~~~~~i~IP~G~~Hg~~~l~~~~~~ll~~~~~~y~~~~~~~i~~~dp~l~~~W~~~~-- 167 (174)
T 3ejk_A 90 YDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANCTDIPHRQGESERAPQDAPFIPFSWAGAD-- 167 (174)
T ss_dssp ECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEEESSCCCTTSEEECCTTCTTSCCCGGGCC--
T ss_pred EEEEECCCCEEEEEEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 861003231114778996367641178980102256898179846999956987581344461599998689899976--
Q ss_pred CCEECH
Q ss_conf 630167
Q gi|254780919|r 159 LPSVSE 164 (198)
Q Consensus 159 ~piiS~ 164 (198)
|+||+
T Consensus 168 -~~ls~ 172 (174)
T 3ejk_A 168 -LSGTP 172 (174)
T ss_dssp -CCCC-
T ss_pred -CCCCC
T ss_conf -77896
No 10
>>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} (A:)
Probab=99.95 E-value=1.2e-28 Score=185.00 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=116.9
Q ss_pred CCCEEEEECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHH
Q ss_conf 57539970762203795042110889898679987413442331252000000015555544012100002222234334
Q gi|254780919|r 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVD 82 (198)
Q Consensus 3 I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvD 82 (198)
|+||++++++.|.|.||+|.++|+.+.+.. ..+.|.++|.+ ++|++||+|+|. .|+++++|++|++..++.|
T Consensus 2 I~gv~~i~~~~~~d~rG~~~~~~~~~~~~~----~~~~~~~~~~~-~pg~~rg~H~H~---~~~e~~~v~~G~~~v~~~d 73 (141)
T 2pa7_A 2 HMENKVINFKKIIDSRGSLVAIEENKNIPF----SIKRVYYIFDT-KGEEPRGFHAHK---KLEQVLVCLNGSCRVILDD 73 (141)
T ss_dssp --CCSEEECCEEEETTEEEEEEETTTTSSS----CCCEEEEEESC-CSSCCEEEEEES---SCCEEEEEEESCEEEEEEC
T ss_pred CCCCEEECCCCEECCCCCEEEEECCCCCCC----CCCEEEEEECC-CCCCEECCCCCC---CEEEEEEECCCEEEEEEEC
T ss_conf 975678658950989977999863667886----32369999638-998455132242---2008889635718998731
Q ss_pred CCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCC
Q ss_conf 06421333100113662365302333023220345307453389721787671017021688801177478887
Q gi|254780919|r 83 IRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD 156 (198)
Q Consensus 83 lR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~ 156 (198)
|.+|+| .++.+++.+++||+|++|||++++|+++++|+++.+|+|++ .++|+|+.++++||++.
T Consensus 74 -~~~~~~-------~~~~~~~~~i~IP~Gv~H~~~~~~d~~~~~~~~~~~~~p~d--~~~~~D~~~~~~w~~~~ 137 (141)
T 2pa7_A 74 -GNIIQE-------ITLDSPAVGLYVGPAVWHEMHDFSSDCVMMVLASDYYDETD--YIRQYDNFKKYIAKINL 137 (141)
T ss_dssp -SSCEEE-------EEECCTTEEEEECTTCEEEEECCCTTCEEEEEESSCCCGGG--EECCHHHHHHHHHHHHH
T ss_pred -CCCCHH-------HHCCCCCCEEECCHHHHHHHHCCCCCCEEEEECCCCCCHHH--HCCCHHHHHHHHHHCCC
T ss_conf -422133-------32204210125378987786405999799998188988454--10379999999876152
No 11
>>2zkl_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, isomerase; 2.61A {Staphylococcus aureus} (A:249-369)
Probab=99.88 E-value=5.8e-23 Score=152.24 Aligned_cols=118 Identities=15% Similarity=0.167 Sum_probs=105.9
Q ss_pred EECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHH
Q ss_conf 70762203795042110889898679987413442331252000000015555544012100002222234334064213
Q gi|254780919|r 9 LKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSP 88 (198)
Q Consensus 9 i~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~Sp 88 (198)
++++++.|+||.|.|.++ +..++|.+++.+ ++|++||+|+|. .|.++++|++|++..+++|.
T Consensus 2 i~~~~~~d~RG~~~e~~~---------~~~~~~~~~~~~-~pG~~rg~H~H~---~~~e~~~vl~G~~~~~~~D~----- 63 (121)
T 2zkl_A 2 YPLLMNVDDRGSFTEFIK---------TPDRGQVSVNIS-KPGITKGNHWHH---TKNEKFLVVSGKGVIRFRHV----- 63 (121)
T ss_dssp CCCCEEECSSEEEEEEEE---------CSSSCEEEEEEE-CTTCEEEEEECS---SCCEEEEEEESEEEEEEEET-----
T ss_pred CCCCCCCCCCCEEEEEEE---------CCCCCEEEEEEC-CCCCEECCEECC---CCCEEEEEECCEEEEEEEEC-----
T ss_conf 231000366761798787---------166643899980-798351324047---76379999786799999978-----
Q ss_pred HHHHEEEEEEECCCCCEEEECCCCCEEEEEECC-CCEEEEEECCCCCCHHCEECCCC
Q ss_conf 331001136623653023330232203453074-53389721787671017021688
Q gi|254780919|r 89 TYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM-NTEVIYKVTDFYSVEHDSGVAWQ 144 (198)
Q Consensus 89 Tfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d-~~~i~Y~~~~~y~p~~e~~i~~~ 144 (198)
++|++..+.++.+++.+++||+|++|||+++++ +++++|.++..|+|+++.+++|+
T Consensus 64 ~~~~~~~~~~~~~~~~~v~IP~G~~H~~~n~g~~~~~~l~~~~~~~~~e~~~~~~~d 120 (121)
T 2zkl_A 64 NDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLE 120 (121)
T ss_dssp TCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEEESSCCCSSSCCCEECC
T ss_pred CCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEECC
T ss_conf 999779999589983899948986799898588867999966867787899860036
No 12
>>1juh_A Quercetin 2,3-dioxygenase; copper, cupin, glycoprotein, beta sandwich, oxidoreductase; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} (A:24-221)
Probab=97.22 E-value=0.0018 Score=40.17 Aligned_cols=107 Identities=12% Similarity=-0.015 Sum_probs=73.7
Q ss_pred CEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHH
Q ss_conf 62203795042110889898679987413442331252000000015555544012100002222234334064213331
Q gi|254780919|r 12 RKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYG 91 (198)
Q Consensus 12 ~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfg 91 (198)
+.+....|........+... ....+....+. ..+|..+.+|.+.. +..+++|++|++...+.|- -+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~pg~~~~~H~H~~---~~E~~~Vl~G~~~~~~~~~------~~ 68 (198)
T 1juh_A 3 RAVTVDTQLYRFYVTGPSSG---YAFTLMGTNAP--HSDALGVLPHIHQK---HYENFYCNKGSFQLWAQSG------NE 68 (198)
T ss_dssp TCEEETTEEEEEEECHHHHT---TSCEEEEEEEC--CCSSCSSCCEECSS---CEEEEEEEESEEEEEEEET------TS
T ss_pred EEEECCCCEEEEEECCCCCC---CEEEEEEEEEC--CCCCCCCCCCCCCC---CEEEEEEEEEEEEEEEECC------CC
T ss_conf 27862886799997156689---71899999617--88888887616477---6389999975899999537------89
Q ss_pred HEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCC
Q ss_conf 0011366236530233302322034530745338972178767
Q gi|254780919|r 92 CWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134 (198)
Q Consensus 92 k~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~ 134 (198)
+...+.|.+ +..++||+|..|.|...++.+.++...+....
T Consensus 69 ~~~~~~l~~--Gd~~~iP~g~~H~~~n~~~~~~~~~v~~~~~~ 109 (198)
T 1juh_A 69 TQQTRVLSS--GDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGF 109 (198)
T ss_dssp CCEEEEEET--TCEEEECTTEEEEEEECSTTEEEEEEEESSCT
T ss_pred CEEEEEECC--CCEEEECCCCEEEEEECCCCCEEEEEECCCCH
T ss_conf 738999689--98899699975885866998238999878747
No 13
>>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} (A:344-510)
Probab=96.68 E-value=0.0021 Score=39.70 Aligned_cols=112 Identities=17% Similarity=0.128 Sum_probs=76.2
Q ss_pred CCEEEECCCEEEEEECHHH--HHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHH
Q ss_conf 7622037950421108898--98679987413442331252000000015555544012100002222234334064213
Q gi|254780919|r 11 TRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSP 88 (198)
Q Consensus 11 ~~~f~D~RG~f~e~f~~~~--~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~Sp 88 (198)
+..+.-..|.+.+....+. +... ...+...+ + .+|.++-.|++.. .+++++|++|+...-+++-.-
T Consensus 3 ~~~~~~~gg~~~~~~~~~~P~L~~~--~~s~~~~~--l--~p~~~~~PH~h~~---a~ei~~V~~G~~~v~~v~~~g--- 70 (167)
T 3c3v_A 3 PDIYNPQAGSLKTANELNLLILRWL--GLSAEYGN--L--YRNALFVPHYNTN---AHSIIYALRGRAHVQVVDSNG--- 70 (167)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHH--TCEEEEEE--E--ETTCEEEEEEESS---CCEEEEEEESEEEEEEECTTS---
T ss_pred CCCCCCCCCEEEEECHHHHHHHHHH--CCCEEEEE--E--CCCCEEEEEECCC---CCEEEEEEECCEEEEEEECCC---
T ss_conf 7641588854168466885556550--42247863--3--4895630034688---878999984737999991899---
Q ss_pred HHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHC
Q ss_conf 33100113662365302333023220345307453389721787671017
Q gi|254780919|r 89 TYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHD 138 (198)
Q Consensus 89 Tfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e 138 (198)
.+.+...|.+ +..++||.|++|..+..++...+.....+.-++..+
T Consensus 71 --~~~~~~~l~~--Gdv~~iP~G~~h~~~n~~~~~~~~~~~~~~~~~~~~ 116 (167)
T 3c3v_A 71 --NRVYDEELQE--GHVLVVPQNFAVAGKSQSDNFEYVAFKTDSRPSIAN 116 (167)
T ss_dssp --CEEEEEEEET--TCEEEECTTCEEEEEECSSEEEEEEEESSSSCCEEE
T ss_pred --CEEEEEEECC--CCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf --7799769759--858999999879997079985999997569977521
No 14
>>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} (A:310-476)
Probab=96.68 E-value=0.0057 Score=37.24 Aligned_cols=115 Identities=15% Similarity=0.113 Sum_probs=75.8
Q ss_pred CCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHH
Q ss_conf 76220379504211088989867-99874134423312520000000155555440121000022222343340642133
Q gi|254780919|r 11 TRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT 89 (198)
Q Consensus 11 ~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpT 89 (198)
...|.-+-|.+.+.... .+..+ +....+.... + .+|.++..|+|.. .+.+++|++|+...-+++ +.
T Consensus 3 ~p~~~~~~G~~~~~~~~-~~P~L~~~~~~~~~~~--l--~pg~~~~PH~H~~---a~ei~yv~~G~~~v~~v~-----~~ 69 (167)
T 1fxz_A 3 PDIYNPQAGSVTTATSL-DFPALSWLRLSAEFGS--L--RKNAMFVPHYNLN---ANSIIYALNGRALIQVVN-----CN 69 (167)
T ss_dssp CSEEETTTEEEEEECTT-TSGGGTTTTCCEEEEE--E--CTTCEEEEEEETT---CCEEEEEEESEEEEEEEC-----TT
T ss_pred CCCCCCCCCCEEEECCC-CCCHHHHHHHHHHHCC--C--CCCCEECCCCCCC---CCEEEEEECCCEEEEEEE-----CC
T ss_conf 76447877734310135-7604567766646412--1--0263443311467---450688835725899970-----38
Q ss_pred HHHEEEEEEECCCCCEEEECCCCCEEEEEECCCC-EEEEEECCCCCCHHCEE
Q ss_conf 3100113662365302333023220345307453-38972178767101702
Q gi|254780919|r 90 YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT-EVIYKVTDFYSVEHDSG 140 (198)
Q Consensus 90 fgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~-~i~Y~~~~~y~p~~e~~ 140 (198)
=.+....+|.+ +..++||+|+.|......+.+ .+.........+..-.+
T Consensus 70 ~~~~~~~~l~~--Gdv~~iP~G~~h~~~n~~~~~~~~~~~~~~~~~~~~~~g 119 (167)
T 1fxz_A 70 GERVFDGELQE--GRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAG 119 (167)
T ss_dssp SCEEEEEEEET--TCEEEECTTCEEEEEECSTTEEEEEEESSSSCCEEESSS
T ss_pred CCEEECCCCCC--CEEEEEECCEEEEEECCCCCEEEEEEECCCCCCEEEHHH
T ss_conf 83643352235--649995042188650257760378763289752110123
No 15
>>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} (A:28-209)
Probab=96.61 E-value=0.0027 Score=39.05 Aligned_cols=75 Identities=21% Similarity=0.281 Sum_probs=53.1
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCC-EEEE
Q ss_conf 200000001555554401210000222223433406421333100113662365302333023220345307453-3897
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT-EVIY 127 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~-~i~Y 127 (198)
.+|..+++|++.. +..+++|++|++...+++- -++...+.|.+ +..++||+|.+|.+....+.. .++.
T Consensus 33 ~pG~~~~~H~H~~---~~E~~~Vl~G~~~~~~~~~------~~~~~~~~l~~--Gd~~~iP~g~~H~~~N~~~~~~~~l~ 101 (182)
T 2vqa_A 33 EPGAIRELHWHAN---AAEWAYVMEGRTRITLTSP------EGKVEIADVDK--GGLWYFPRGWGHSIEGIGPDTAKFLL 101 (182)
T ss_dssp CTTCEEEEEECTT---CCEEEEEEESEEEEEEECT------TSCEEEEEEET--TEEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CCCCCCCCEECCC---CCEEEEEEEEEEEEEEEEE------CCEEEEEEEEC--CCEEEECCCCEEEEEECCCCCEEEEE
T ss_conf 8996358608899---8759999957899999996------99999999807--97899899986999937999769999
Q ss_pred EECCCCC
Q ss_conf 2178767
Q gi|254780919|r 128 KVTDFYS 134 (198)
Q Consensus 128 ~~~~~y~ 134 (198)
..+....
T Consensus 102 ~~~~~~~ 108 (182)
T 2vqa_A 102 VFNDGTF 108 (182)
T ss_dssp EESSTTC
T ss_pred EECCCCC
T ss_conf 9679986
No 16
>>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloenzyme, trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A (A:19-191)
Probab=96.54 E-value=0.004 Score=38.10 Aligned_cols=74 Identities=11% Similarity=0.124 Sum_probs=54.0
Q ss_pred CCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 25200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r 47 SFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 47 s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
+..+|..+++|.+. .+-+++|++|++...+.| -|+...+.|.+ +..++||+|+.|.+...++...++
T Consensus 19 ~~~pG~~~~~H~H~----~~E~~yvl~G~~~~~v~~-------~g~~~~~~l~~--Gd~~~iP~g~~H~~~n~gd~~~~~ 85 (173)
T 2qnk_A 19 IGGPNTRKDYHIEE----GEEVFYQLEGDXVLRVLE-------QGKHRDVVIRQ--GEIFLLPARVPHSPQRFANTVGLV 85 (173)
T ss_dssp ECSCBCCCCEEECS----SCEEEEEEESCEEEEEEE-------TTEEEEEEECT--TEEEEECTTCCEEEEECTTCEEEE
T ss_pred ECCCCCCCCCCCCC----CCEEEEEEECEEEEEEEE-------CCCCEEEECCC--CCEEEECCCCCCCCEECCCCCEEE
T ss_conf 67999877574488----551899981689999991-------89737963499--878980599950426649966899
Q ss_pred EEECCCC
Q ss_conf 7217876
Q gi|254780919|r 127 YKVTDFY 133 (198)
Q Consensus 127 Y~~~~~y 133 (198)
....+.-
T Consensus 86 l~~~~~~ 92 (173)
T 2qnk_A 86 VERRRLE 92 (173)
T ss_dssp EEECCCT
T ss_pred EEEECCC
T ss_conf 9996788
No 17
>>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant protein; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A (A:339-493)
Probab=96.51 E-value=0.0022 Score=39.57 Aligned_cols=106 Identities=16% Similarity=0.131 Sum_probs=71.6
Q ss_pred CCEEEECCCEEEEEECHHH--HHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHH
Q ss_conf 7622037950421108898--98679987413442331252000000015555544012100002222234334064213
Q gi|254780919|r 11 TRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSP 88 (198)
Q Consensus 11 ~~~f~D~RG~f~e~f~~~~--~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~Sp 88 (198)
...+..+-|.+.+....+. +...+ ... ....+ .+|.++-.|++.. .+++++|++|+...-+++...
T Consensus 3 ~~~~~~~~G~~~~~~~~~~P~L~~~~--~s~--~~~~l--~pg~~~~PH~h~~---A~ei~~v~~G~~~v~~v~~~~--- 70 (155)
T 2d5f_A 3 ADFYNPKAGRISTLNSLTLPALRQFG--LSA--QYVVL--YRNGIYSPHWNLN---ANSVIYVTRGKGRVRVVNXQG--- 70 (155)
T ss_dssp CSEEETTTEEEEEESTTTSTTHHHHT--CEE--EEEEE--CTTCEEEEEEESS---CCEEEEEEEEEEEEEEECTTS---
T ss_pred CCCCCCCCCEEEEECHHHHHHHHHCC--CEE--EEEEE--CCCCCCCEEECCC---CCEEEEEEEEEEEEEEEECCC---
T ss_conf 88536888556895689966665447--503--56541--3475211166688---888999994058999992899---
Q ss_pred HHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 33100113662365302333023220345307453389721787
Q gi|254780919|r 89 TYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132 (198)
Q Consensus 89 Tfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~ 132 (198)
-+.....|.+ +..++||.|++|.-...++...++-+-++.
T Consensus 71 --~~~~~~~l~~--Gdv~~vP~G~~h~~~n~~~~~~~~~~~~~~ 110 (155)
T 2d5f_A 71 --NAVFDGELRR--GQLLVVPQNFVVAEQGGEQGLEYVVFKTHH 110 (155)
T ss_dssp --CEEEEEEEET--TCEEEECTTCEEEEEEEEEEEEEEEEESST
T ss_pred --CEEEEEEECC--CCEEEECCCCEEEEECCCCCEEEEEEECCC
T ss_conf --7765318738--868999999889998189967999997889
No 18
>>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} (A:22-176)
Probab=96.43 E-value=0.0039 Score=38.19 Aligned_cols=76 Identities=11% Similarity=0.119 Sum_probs=53.5
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|..+++|++. ..-+++|++|++..-+.| +.........+.|.+ +..++||+|..|.+..+++...++.
T Consensus 20 ~~pg~~~~~H~H~----~~E~~yVl~G~~~~~~~d---~~~~~~~~~~~~l~~--Gd~~~iP~g~~H~~~n~~d~~~l~i 90 (155)
T 1zvf_A 20 GGPNERTDYHINP----TPEWFYQKKGSMLLKVVD---ETDAEPKFIDIIINE--GDSYLLPGNVPHSPVRFADTVGIVV 90 (155)
T ss_dssp CSSBCCSCEEECS----SCEEEEEEESCEEEEEEE---CSSSSCEEEEEEECT--TEEEEECTTCCEEEEECTTCEEEEE
T ss_pred ECCCCCCCCCCCC----CHHEEEEECCCEEEEEEC---CCCCCCEEEEEEECC--CCEEECCCCCCCCCCCCCCCEEEEE
T ss_conf 4886667645585----513124532758999980---677887047777468--8679728989878747999634899
Q ss_pred EECCC
Q ss_conf 21787
Q gi|254780919|r 128 KVTDF 132 (198)
Q Consensus 128 ~~~~~ 132 (198)
.....
T Consensus 91 ~~~~~ 95 (155)
T 1zvf_A 91 EQDRP 95 (155)
T ss_dssp EECCC
T ss_pred EEECC
T ss_conf 97428
No 19
>>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} (A:)
Probab=96.42 E-value=0.011 Score=35.54 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=67.4
Q ss_pred CEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEE
Q ss_conf 504211088989867-9987413442331252000000015555544012100002222234334064213331001136
Q gi|254780919|r 19 GWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLE 97 (198)
Q Consensus 19 G~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~ 97 (198)
|...+. +...+..+ +....+.. .. ..+|.++-.|++-. -+.+++|++|+...-+++... +-++.....
T Consensus 54 g~v~~~-~~~~~P~l~~~~is~~~--~~--l~pg~~~~pH~Hp~---A~e~~yV~~G~~~~~~~~~~~---~~~~~~~~~ 122 (201)
T 1fi2_A 54 SAVTEL-DVAEWPGTNTLGVSMNR--VD--FAPGGTNPPHIHPR---ATEIGMVMKGELLVGILGSLD---SGNKLYSRV 122 (201)
T ss_dssp EEEEEE-STTTCGGGTTSSCEEEE--EE--ECTTCEEEEEECTT---CCEEEEEEESEEEEEEECCGG---GTTCEEEEE
T ss_pred CEEEEE-EHHCCCCCCCCCEEEEE--EE--ECCCCCCCCCCCCC---CCEEEEEEECCEEEEEEECCC---CCCEEEEEE
T ss_conf 378995-02208561447433799--99--88997837820899---888999993735899984456---797268875
Q ss_pred EECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCH
Q ss_conf 623653023330232203453074533897217876710
Q gi|254780919|r 98 ISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVE 136 (198)
Q Consensus 98 Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~ 136 (198)
|.+ +.+++||+|..|-.....+...+.+.+-+.-+++
T Consensus 123 l~~--Gdv~~iP~G~~h~~~n~~~~~~~~~~~~~~~~~~ 159 (201)
T 1fi2_A 123 VRA--GETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp EET--TCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCC--CCEEEECCCCEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 379--8589988997189997699988999997799986
No 20
>>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} (A:)
Probab=96.34 E-value=0.0051 Score=37.51 Aligned_cols=76 Identities=9% Similarity=-0.029 Sum_probs=56.5
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|..+-+|.+. ...+++|++|+....+.| -|+...+.|.+ +..++||+|..|....+++++.++.
T Consensus 42 ~~pg~~~~~H~H~----~~E~~yvl~G~~~~~~~~-------~g~~~~~~l~~--Gd~~~iP~g~~H~~~~~~~~~~~l~ 108 (174)
T 1yfu_A 42 GGPNHRTDYHDDP----LEEFFYQLRGNAYLNLWV-------DGRRERADLKE--GDIFLLPPHVRHSPQRPEAGSACLV 108 (174)
T ss_dssp CSCBCCCCEEECS----SCEEEEEEESCEEEEEEE-------TTEEEEEEECT--TCEEEECTTCCEEEEBCCTTCEEEE
T ss_pred CCCCCCCCCEECC----CHHEEEEECCEEEEEEEC-------CCCEEEEECCC--CCEEEECCCCCCCCCCCCCCCCEEE
T ss_conf 1688667430177----003237862459999970-------89738863389--8689718999878665668852089
Q ss_pred EECCCCCCH
Q ss_conf 217876710
Q gi|254780919|r 128 KVTDFYSVE 136 (198)
Q Consensus 128 ~~~~~y~p~ 136 (198)
..+..-..+
T Consensus 109 i~~~~~~~~ 117 (174)
T 1yfu_A 109 IERQRPAGM 117 (174)
T ss_dssp EEECCCTTC
T ss_pred EEEECCCCC
T ss_conf 997549998
No 21
>>2o8q_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans LB400} (A:)
Probab=95.86 E-value=0.031 Score=32.99 Aligned_cols=100 Identities=13% Similarity=-0.058 Sum_probs=64.0
Q ss_pred CCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEE
Q ss_conf 79504211088989867998741344233125200000001555554401210000222223433406421333100113
Q gi|254780919|r 17 SRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSL 96 (198)
Q Consensus 17 ~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~ 96 (198)
.++...+.+....... ....+.... +...+|.-.++|++.. +.-+++|++|++...+.|- ..+
T Consensus 23 ~~~~~~~~~~~~~~~~--~~~~~~~~~--v~~~~g~~~~~h~H~~---~~e~~~Vl~G~~~~~~~~~----------~~~ 85 (134)
T 2o8q_A 23 REFFEYRDTGVNEATG--GXFGAHVIR--AIPGKEAKPTWHTHTV---GFQLFYVLRGWVEFEYEDI----------GAV 85 (134)
T ss_dssp CTTEEEEECSHHHHHT--TSCEEEEEE--ECC-----CCCEEECC---SCEEEEEEESEEEEEETTT----------EEE
T ss_pred CCEEEEEECCCCCCCC--CEEEEEEEE--ECCCCCCCCCEEECCC---CCEEEEEEEEEEEEEEEEE----------EEE
T ss_conf 0507863034542459--879999999--8889998763668899---8689999412999999742----------079
Q ss_pred EEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCC
Q ss_conf 662365302333023220345307453389721787671
Q gi|254780919|r 97 EISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSV 135 (198)
Q Consensus 97 ~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p 135 (198)
.|.+ +..++||+|..|++...++.+.++..++..+..
T Consensus 86 ~l~~--GD~i~~p~g~~H~~~n~~~~~~~l~v~~~~~~~ 122 (134)
T 2o8q_A 86 XLEA--GGSAFQPPGVRHRELRHSDDLEVLEIVSPAGFA 122 (134)
T ss_dssp EEET--TCEEECCTTCCEEEEEECTTCEEEEEESSTTCC
T ss_pred EECC--CCEEEECCCCEEEEEECCCCEEEEEEECCCCCC
T ss_conf 9439--999998699669348289995999999999743
No 22
>>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A (A:294-459)
Probab=95.85 E-value=0.01 Score=35.82 Aligned_cols=105 Identities=16% Similarity=0.094 Sum_probs=69.7
Q ss_pred CCEEEECCCEEEEEECHHH--HHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHH
Q ss_conf 7622037950421108898--98679987413442331252000000015555544012100002222234334064213
Q gi|254780919|r 11 TRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSP 88 (198)
Q Consensus 11 ~~~f~D~RG~f~e~f~~~~--~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~Sp 88 (198)
...+..+-|.+.+....+. +...+ ..+. ... ..+|.++-.|++.. -..+++|++|+...-+++-.
T Consensus 3 ~~~~~~~~G~~~~~~~~~~p~L~~~~--~~~~--~~~--l~pg~~~~PH~H~~---a~ei~yV~~G~~~~~~~~~~---- 69 (166)
T 2e9q_A 3 ADVFNPRGGRISTANYHTLPILRQVR--LSAE--RGV--LYSNAMVAPHYTVN---SHSVMYATRGNARVQVVDNF---- 69 (166)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHHT--CEEE--EEE--ECTTCEEEEEEESS---CCEEEEEEEEEEEEEEECTT----
T ss_pred CCCCCCCCCEEEEECHHHHHHHHHCC--EEEE--EEE--ECCCCEEEEEECCC---CCEEEEEECCEEEEEEECCC----
T ss_conf 87526887368870767721231044--0368--987--53894553035688---88899998465999998699----
Q ss_pred HHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 3310011366236530233302322034530745338972178
Q gi|254780919|r 89 TYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTD 131 (198)
Q Consensus 89 Tfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~ 131 (198)
=.+.....|.+ +..++||.|+.|......+...++...+.
T Consensus 70 -~~~~~~~~l~~--Gdv~~iP~G~~h~~~n~~~~~~~~~~~~~ 109 (166)
T 2e9q_A 70 -GQSVFDGEVRE--GQVLMIPQNFVVIKRASDRGFEWIAFKTN 109 (166)
T ss_dssp -SCEEEEEEEET--TCEEEECTTCEEEEEEEEEEEEEEEEESS
T ss_pred -CCEEEEEEECC--CEEEEECCCCEEEEECCCCCEEEEEEECC
T ss_conf -97899888648--73999899977999817998499999748
No 23
>>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} (A:17-222)
Probab=95.81 E-value=0.0088 Score=36.15 Aligned_cols=68 Identities=18% Similarity=0.081 Sum_probs=50.9
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|.++.+|++.. ..+++|++|+....+++-. ....+.|.+ +..++||+|..|.+....+...+.+
T Consensus 40 l~Pg~~~~pH~H~a----~e~~yV~~G~g~~~~~~~~-------~~~~~~l~~--GD~~~iP~G~~H~~~N~g~~~~~~~ 106 (206)
T 1uij_A 40 SKPNTILLPHHADA----DFLLFVLSGRAILTLVNND-------DRDSYNLHP--GDAQRIPAGTTYYLVNPHDHQNLKM 106 (206)
T ss_dssp ECTTEEEEEEEESE----EEEEEEEESCEEEEEECSS-------CEEEEEECT--TEEEEECTTCEEEEEECCSSCCEEE
T ss_pred ECCCCEECCCCCCC----CEEEEEEECEEEEEEEECC-------CEEEEECCC--CCEEEECCCCEEEEEECCCCCCEEE
T ss_conf 77982767764799----8699999188999999689-------746886168--8779978996699995799976899
Q ss_pred E
Q ss_conf 2
Q gi|254780919|r 128 K 128 (198)
Q Consensus 128 ~ 128 (198)
.
T Consensus 107 ~ 107 (206)
T 1uij_A 107 I 107 (206)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 24
>>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein; 2.40A {Prunus dulcis} PDB: 3ehk_A (A:366-531)
Probab=95.62 E-value=0.015 Score=34.85 Aligned_cols=103 Identities=18% Similarity=0.097 Sum_probs=66.3
Q ss_pred CEEEECCCEEEEEECHHH--HHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHH
Q ss_conf 622037950421108898--986799874134423312520000000155555440121000022222343340642133
Q gi|254780919|r 12 RKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT 89 (198)
Q Consensus 12 ~~f~D~RG~f~e~f~~~~--~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpT 89 (198)
..+.-+-|.+.+....+. +...+ ..+.. ..+ .+|.++-.|++.. .+.+++|++|++..-+++-.-
T Consensus 4 ~~~~~~~g~~~~~~~~~~P~L~~~~--~s~~~--~~l--~pg~~~~PH~h~~---a~ei~~V~~G~~~v~~v~~~~---- 70 (166)
T 3fz3_A 4 DIFSPRAGRISTLNSHNLPILRFLR--LSAER--GFF--YRNGIYSPHWNVN---AHSVVYVIRGNARVQVVNENG---- 70 (166)
T ss_dssp SEEETTTEEEEEESTTTCTHHHHHT--CEEEE--EEE--CTTCEEEEEEESS---CCEEEEEEEEEEEEEEECTTS----
T ss_pred CCCCCCCCEEEECCHHHHHHHHHCC--CEEEE--EEE--CCCCEEEEEECCC---CCEEEEEEECEEEEEEEECCC----
T ss_conf 6646887347871778834553236--10589--874--3896761154699---888999992628999996899----
Q ss_pred HHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 31001136623653023330232203453074533897217
Q gi|254780919|r 90 YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVT 130 (198)
Q Consensus 90 fgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~ 130 (198)
.+.+...|.+ +..++||.|+.|-.+...+...++-..+
T Consensus 71 -~~~~~~~l~~--Gdv~~iP~G~~h~~~n~~~~~~~~~~~~ 108 (166)
T 3fz3_A 71 -DAILDQEVQQ--GQLFIVPQNHGVIQQAGNQGFEYFAFKT 108 (166)
T ss_dssp -CEEEEEEEET--TCEEEECTTCEEEEEEEEEEEEEEEEES
T ss_pred -CEEEEEEECC--CCEEEECCCCEEEEEECCCCEEEEEEEC
T ss_conf -8798638738--8789999998799980799869999964
No 25
>>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} (A:1-309)
Probab=95.58 E-value=0.036 Score=32.65 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=65.2
Q ss_pred ECCCEEEEEECHHH--HHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCC--------
Q ss_conf 37950421108898--98679987413442331252000000015555544012100002222234334064--------
Q gi|254780919|r 16 DSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRR-------- 85 (198)
Q Consensus 16 D~RG~f~e~f~~~~--~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~-------- 85 (198)
...|-.++.+.... +.-+|.. +.. + ..++|.++-.||...+ ++++|++|+...-+|..-.
T Consensus 27 ~se~G~~~~~~~~~~~l~~~gvs--~~~--~--~i~p~~l~~Ph~~~A~----ei~yV~~G~g~~~~v~pg~~~~~~~~~ 96 (309)
T 1fxz_A 27 ESEGGLIETWNPNNKPFQCAGVA--LSR--C--TLNRNALRRPSYTNGP----QEIYIQQGKGIFGMIYPGCPSTFEEPQ 96 (309)
T ss_dssp EETTEEEEECCTTSHHHHHHTCE--EEE--E--EECTTEEEEEEEESSC----EEEEEEECCEEEEEECTTCCCC-----
T ss_pred CCCCCEEEECCCCCCCCCCCEEE--EEC--C--CCCCHHHCCCCCCCCC----CEEEEECCCCEEEEECCCCCCCCCCCC
T ss_conf 35686676238999864102024--002--1--0150222287657897----268773387156764389975335767
Q ss_pred --------CHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf --------2133310011366236530233302322034530745338972
Q gi|254780919|r 86 --------NSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 86 --------~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+.+-++.....|. .+..++||+|++|-.+...+...+...
T Consensus 97 ~~~~~~~~~~~~d~~~~~~~l~--~GDV~~iPaG~~h~~~N~g~~~l~~i~ 145 (309)
T 1fxz_A 97 QPQQRGQSSRPQDRHQKIYNFR--EGDLIAVPTGVAWWMYNNEDTPVVAVS 145 (309)
T ss_dssp -------------CCCCEEEEC--TTEEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CHHHCCCCCCCCHHHHHHHCCC--CCCEEEECCCEEEEEECCCCCCEEEEE
T ss_conf 8435466688522255540545--686685226407887538888568999
No 26
>>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.41A {Bacillus halodurans} (A:)
Probab=95.50 E-value=0.02 Score=34.14 Aligned_cols=77 Identities=17% Similarity=0.119 Sum_probs=53.8
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE-
Q ss_conf 5200000001555554401210000222223433406421333100113662365302333023220345307453389-
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI- 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~- 126 (198)
..+|-..++|.+.. +..+++|++|+....+.|...+ +-..+.|.+ +.+++||+|++|.+...++...+.
T Consensus 50 ~~pG~~~~~H~H~~---~~e~~~Vl~G~~~~~~~~~~~~-----~~~~~~l~~--Gd~~~ip~~~~H~~~N~~~e~~~~l 119 (148)
T 2oa2_A 50 IQVGEDIGLEIHPH---LDQFLRVEEGRGLVQXGHRQDN-----LHFQEEVFD--DYAILIPAGTWHNVRNTGNRPLKLY 119 (148)
T ss_dssp ECTTCBCCCBCCTT---CEEEEEEEESEEEEEEESBTTB-----CCEEEEEET--TCEEEECTTCEEEEEECSSSCEEEE
T ss_pred ECCCCCCCCCCCCC---CCEEEEEECCCEEEEECCEEEC-----CCCEEECCC--CCEEEECCCEEEEEEECCCCCEEEE
T ss_conf 98998837615688---0179999848599999999800-----221260699--9599996733589885699888999
Q ss_pred EEECCCCC
Q ss_conf 72178767
Q gi|254780919|r 127 YKVTDFYS 134 (198)
Q Consensus 127 Y~~~~~y~ 134 (198)
..++..+.
T Consensus 120 ~v~~p~~~ 127 (148)
T 2oa2_A 120 SIYAPPQH 127 (148)
T ss_dssp EEEESCCS
T ss_pred EEECCCCC
T ss_conf 99999989
No 27
>>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like protein, protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} (A:1-149)
Probab=95.45 E-value=0.011 Score=35.51 Aligned_cols=96 Identities=7% Similarity=-0.081 Sum_probs=61.2
Q ss_pred EEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHE
Q ss_conf 20379504211088989867998741344233125200000001555554401210000222223433406421333100
Q gi|254780919|r 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCW 93 (198)
Q Consensus 14 f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~ 93 (198)
..+..+..........-. +..+.+ .... ..+|....+|++.. ..+++|++|+....+-|-+..++. +.
T Consensus 20 ~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~-~~pG~~~~~H~H~~----~E~~~Vl~G~~~~~~~~~~~~~~~--~~ 87 (149)
T 1lr5_A 20 YGIEGLSHITVAGALNHG--MKEVEV---WLQT-ISPGQRTPIHRHSC----EEVFTVLKGKGTLLMGSSSLKYPG--QP 87 (149)
T ss_dssp TTCTTEEEEEEECHHHHC--CSSEEE---EEEE-ECTTCBCCEEEESS----CEEEEEEECCEEEEECCSSSSSCC--SC
T ss_pred CCCCCEEEEEEECCCCCC--CCEEEE---EEEE-ECCCCCCCCEECCC----CEEEEEEEEEEEEEECCCCCCCCC--CC
T ss_conf 688973489863455688--657899---9999-99998488642788----479999956799998883132257--63
Q ss_pred EEEEEECCCCCEEEECCCCCEEEEEECCCC
Q ss_conf 113662365302333023220345307453
Q gi|254780919|r 94 VSLEISANNGLQIYIPTGFAHGFMTLEMNT 123 (198)
Q Consensus 94 ~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~ 123 (198)
..+.|.+ +..++||+|..|.+...+|+.
T Consensus 88 ~~~~l~~--Gd~~~ip~g~~H~~~N~g~~e 115 (149)
T 1lr5_A 88 QEIPFFQ--NTTFSIPVNDPHQVWNSDEHE 115 (149)
T ss_dssp EEEEECT--TEEEEECTTCCEEEECCCSSS
T ss_pred EEEEECC--CCEEEECCCCCEEEEECCCCC
T ss_conf 4899569--989998969957969799998
No 28
>>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.65A {Thermotoga maritima} (A:)
Probab=95.43 E-value=0.024 Score=33.61 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=49.1
Q ss_pred EEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEEC
Q ss_conf 44233125200000001555554401210000222223433406421333100113662365302333023220345307
Q gi|254780919|r 41 QDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120 (198)
Q Consensus 41 Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~ 120 (198)
+..... ..+|-..++|.+. ...+++|++|++...+-+ ..+.|.+ +.++++|+|..|.+...+
T Consensus 49 ~~~~~~-~~pg~~~~~H~H~----~~e~~~vl~G~~~~~~~~-----------~~~~l~~--Gd~~~~p~~~~H~~~n~~ 110 (126)
T 1vj2_A 49 VMRLFT-VEPGGLIDRHSHP----WEHEIFVLKGKLTVLKEQ-----------GEETVEE--GFYIFVEPNEIHGFRNDT 110 (126)
T ss_dssp EEEEEE-EEEEEEEEEECCS----SCEEEEEEESEEEEECSS-----------CEEEEET--TEEEEECTTCCEEEECCS
T ss_pred EEEEEE-ECCCCCCCCEECC----CCEEEEEEECCCEEEEEE-----------EEEEECC--CEEEEECCCCEEEEEECC
T ss_conf 999999-9999898789898----819999994511289810-----------0058624--479999999929999899
Q ss_pred CCCEEEEEE
Q ss_conf 453389721
Q gi|254780919|r 121 MNTEVIYKV 129 (198)
Q Consensus 121 d~~~i~Y~~ 129 (198)
+....++.+
T Consensus 111 ~~~~~~l~v 119 (126)
T 1vj2_A 111 DSEVEFLCL 119 (126)
T ss_dssp SSCEEEEEE
T ss_pred CCCEEEEEE
T ss_conf 998999999
No 29
>>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A (A:29-224)
Probab=95.33 E-value=0.017 Score=34.52 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=62.0
Q ss_pred EEEECCCEEEEEEC--H--HHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHH
Q ss_conf 22037950421108--8--9898679987413442331252000000015555544012100002222234334064213
Q gi|254780919|r 13 KFEDSRGWFSQTYS--S--KLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSP 88 (198)
Q Consensus 13 ~f~D~RG~f~e~f~--~--~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~Sp 88 (198)
.+.-+-|.+..+.. . ..+... ..+....+.+ .+|.+...|++.. ..+++|++|+....+++-..+
T Consensus 6 ~~~~~~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~l--~Pg~~~~pH~h~a----~e~~yVl~G~~~v~~~~~~~~-- 74 (196)
T 2ea7_A 6 LYRNEWGHIRVLQRFDQRSKQMQNL---ENYRVVEFKS--KPNTLLLPHHADA----DFLLVVLNGTAVLTLVNPDSR-- 74 (196)
T ss_dssp EEEETTEEEEEECCSTTTCGGGGGG---TTCEEEEEEE--CTTEEEEEEEESE----EEEEEEEESEEEEEEECSSCE--
T ss_pred HEECCCCEEEEECCCCHHCHHHCCC---CCEEEEEEEE--CCCEEECCCCCCC----CEEEEEEECEEEEEEEECCCC--
T ss_conf 0654794498542501006333476---3238999997--8984637776799----838999918799999979970--
Q ss_pred HHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 3310011366236530233302322034530745338972
Q gi|254780919|r 89 TYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 89 Tfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
..+.|.+ +..++||+|.+|.+...+++..+...
T Consensus 75 -----~~~~l~~--Gd~~~iP~g~~H~~~N~~~~~~~~~~ 107 (196)
T 2ea7_A 75 -----DSYILEQ--GHAQKIPAGTTFFLVNPDDNENLRII 107 (196)
T ss_dssp -----EEEEEET--TEEEEECTTCEEEEEECCSSCCEEEE
T ss_pred -----EEEEECC--CCEEEECCCCEEEEEECCCCCCEEEE
T ss_conf -----4898338--86799789976999967999568999
No 30
>>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal binding protein; 1.75A {Bacillus subtilis} (A:55-232)
Probab=95.29 E-value=0.022 Score=33.88 Aligned_cols=108 Identities=22% Similarity=0.243 Sum_probs=69.2
Q ss_pred EEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHH
Q ss_conf 22037950421108898986799874134423312520000000155555440121000022222343340642133310
Q gi|254780919|r 13 KFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGC 92 (198)
Q Consensus 13 ~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk 92 (198)
.|.-+-|.+.+.-. ..+..+ ....... .. -.+|.++-.|++.. +-.++++.|.....+++- -++
T Consensus 3 ~~~~~~G~~~~~~~-~~~p~l-~~~~~~~--~~--l~pg~~~~pH~h~~----~e~~~vv~g~~~~~~~~~------~~~ 66 (178)
T 1j58_A 3 NRLEKGGYAREVTV-RELPIS-ENLASVN--XR--LKPGAIRELHWHKE----AEWAYXIYGSARVTIVDE------KGR 66 (178)
T ss_dssp CEEETTEEEEEECT-TTCTTC-SSCEEEE--EE--ECTTCEEEEEEESS----CEEEEEEEEEEEEEEECT------TSC
T ss_pred CCCCCCCCEEEEEH-HHCCCH-HHHHHEE--EE--ECCCCCCCCCCCCC----CCEEEEEECEEEEEEEEC------CCC
T ss_conf 52157971278656-668241-1110137--89--76996748616363----037999958799999908------994
Q ss_pred EEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHC
Q ss_conf 0113662365302333023220345307453389721787671017
Q gi|254780919|r 93 WVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHD 138 (198)
Q Consensus 93 ~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e 138 (198)
.....|.+ +..++||+|+.|......+...++....+.-++..+
T Consensus 67 ~~~~~l~~--Gdv~~iP~g~~h~~~n~~~~~~~~~~~~~~~~~~~~ 110 (178)
T 1j58_A 67 SFIDDVGE--GDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENS 110 (178)
T ss_dssp EEEEEEET--TEEEEECTTCCEEEEEEEEEEEEEEEESCTTCCGGG
T ss_pred EEEEEECC--CCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCC
T ss_conf 89988536--878998999769997269996899997688866554
No 31
>>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, plant protein; 2.00A {Canavalia ensiformis} (A:55-254)
Probab=95.18 E-value=0.019 Score=34.17 Aligned_cols=66 Identities=17% Similarity=0.142 Sum_probs=50.6
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 5200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
..+|.+..+|++. ...+++|++|+....++|-. +-..+.|.+ +..++||+|..|.+....++..+.
T Consensus 39 l~Pg~~~~pH~h~----a~e~~yv~~G~g~v~~~~~~-------~~~~~~l~~--Gd~~~iP~g~~H~~~N~~~~~~~~ 104 (200)
T 2cav_A 39 SKPNTLLLPHHSD----SDLLVLVLEGQAILVLVNPD-------GRDTYKLDQ--GDAIKIQAGTPFYLINPDNNQNLR 104 (200)
T ss_dssp ECSSEEEEEEEES----SEEEEEEEESEEEEEEEETT-------EEEEEEEET--TEEEEECTTCCEEEEECCSSCCEE
T ss_pred ECCCEEECCCCCC----CCEEEEEEECCEEEEEEECC-------CCEEEEECC--CCEEEECCCCEEEEEECCCCCEEE
T ss_conf 5798186775489----87389999583899999699-------835898148--878998899769999669991299
No 32
>>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices, merohedral/ hemihedral twinning; 1.70A {Canavalia ensiformis} (A:)
Probab=94.95 E-value=0.025 Score=33.52 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=50.0
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
.++|....+|++.. ..+++|++|+....+++-. .-..+.|.+ +..++||+|..|.+...++.....+
T Consensus 48 l~PG~~~~~H~H~~----~e~~yv~~G~~~~~~~~~~-------~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~~~~~ 114 (178)
T 1dgw_A 48 SKPNTLLLPHHSDS----DLLVLVLEGQAILVLVNPD-------GRDTYKLDQ--GDAIKIQAGTPFYLINPDNNQNLRI 114 (178)
T ss_dssp ECTTEEEEEEEESS----EEEEEEEESEEEEEEEETT-------EEEEEEEET--TEEEEECTTCCEEEEECCSSSCEEE
T ss_pred ECCCCCCCCCCCCC----CEEEEEEEEEEEEEEECCC-------CCEEEEEEC--CCEEEECCCCEEEEEECCCCCCEEE
T ss_conf 52896053426998----7899999838999996089-------717999728--9799989997599998799978899
Q ss_pred E
Q ss_conf 2
Q gi|254780919|r 128 K 128 (198)
Q Consensus 128 ~ 128 (198)
.
T Consensus 115 ~ 115 (178)
T 1dgw_A 115 L 115 (178)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 33
>>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} (A:83-255)
Probab=94.41 E-value=0.035 Score=32.68 Aligned_cols=65 Identities=26% Similarity=0.272 Sum_probs=46.1
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|...++|.+. +..+++|++|+....+.| -..+.+.+ +..++||+|+.|.+...+++..+.+
T Consensus 48 ~~pG~~~~~H~H~----~~e~~~vl~G~~~~~~~~----------~~~~~~~~--GD~~~ip~g~~H~~~n~~~~~~~~~ 111 (173)
T 3bu7_A 48 MKAGERAGAHRHA----ASALRFIMEGSGAYTIVD----------GHKVELGA--NDFVLTPNGTWHEHGILESGTECIW 111 (173)
T ss_dssp ECTTCBCCCEEES----SCEEEEEEECSCEEEEET----------TEEEEECT--TCEEEECTTCCEEEEECTTCCCEEE
T ss_pred ECCCCCCCCCCCC----CCEEEEEEECCCEEEEEC----------CEEEEEEC--CCEEEECCCCEEEEECCCCCCCEEE
T ss_conf 7899846734246----301799997883799799----------98976127--9989848995086033799986899
Q ss_pred E
Q ss_conf 2
Q gi|254780919|r 128 K 128 (198)
Q Consensus 128 ~ 128 (198)
.
T Consensus 112 l 112 (173)
T 3bu7_A 112 Q 112 (173)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 34
>>2pyt_A Ethanolamine utilization protein EUTQ; 16421009, structural genomics, joint center for structural genomics, JCSG; 1.90A {Salmonella typhimurium LT2} (A:)
Probab=94.25 E-value=0.041 Score=32.32 Aligned_cols=67 Identities=13% Similarity=0.075 Sum_probs=45.6
Q ss_pred EEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 00001555554401210000222223433406421333100113662365302333023220345307453389721787
Q gi|254780919|r 53 IRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132 (198)
Q Consensus 53 lRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~ 132 (198)
-.++|.+. .+..+++|++|++..-+=| ..+.|.+ +.+++||+|..|.|.+.++ +.+++.++-.
T Consensus 66 pg~~~~h~---~~~E~~~VleG~~~v~~~~-----------~~~~l~~--Gd~i~ip~g~~H~~~n~~~-~~~~~v~~p~ 128 (133)
T 2pyt_A 66 NAFFPWTL---NYDEIDXVLEGELHVRHEG-----------ETXIAKA--GDVXFIPKGSSIEFGTPTS-VRFLYVAWPA 128 (133)
T ss_dssp EEEEEEEC---SSEEEEEEEEEEEEEEETT-----------EEEEEET--TCEEEECTTCEEEEEEEEE-EEEEEEEEST
T ss_pred CCCCCCCC---CCEEEEEEEEEEEEEEECC-----------EEEEECC--CCEEEECCCCEEEEEECCC-EEEEEEECCC
T ss_conf 87402219---9509999999999999899-----------9999759--9999989999899994898-6999998786
Q ss_pred CCCH
Q ss_conf 6710
Q gi|254780919|r 133 YSVE 136 (198)
Q Consensus 133 y~p~ 136 (198)
+.|+
T Consensus 129 ~~~e 132 (133)
T 2pyt_A 129 NWQS 132 (133)
T ss_dssp TCC-
T ss_pred CCCC
T ss_conf 5042
No 35
>>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal binding protein; 1.75A {Bacillus subtilis} (A:22-54,A:233-349)
Probab=93.98 E-value=0.17 Score=28.76 Aligned_cols=67 Identities=18% Similarity=0.209 Sum_probs=47.1
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
.+|.--|+|++.. +...++|++|+....+-|..- --..+.+.+ +.+++||+|..|++...++...+.
T Consensus 66 ~PG~~~~~H~H~~---~~E~~~Vi~G~g~~~ig~~~~------dg~e~~v~~--GD~i~ippG~~H~~~N~gd~~lv~ 132 (150)
T 1j58_A 66 EPGAXRELHWHPN---THEWQYYISGKARXTVFASDG------HARTFNYQA--GDVGYVPFAXGHYVENIGDEPLVF 132 (150)
T ss_dssp CTTCEEEEEECSS---SCEEEEEEESEEEEEEEEETT------EEEEEEEES--SCEEEECTTCBEEEEECSSSCEEE
T ss_pred CCCCCCCCCCCCC---CCEEEEEEECEEEEEEEECCC------CEEEEEECC--CCEEEECCCCEEEEEECCCCCEEE
T ss_conf 5874148977989---768999997969999990799------379998448--968998999759999759998899
No 36
>>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle, 5-phospho-D- arabinonate; HET: PA5; 1.50A {Pyrococcus furiosus} (A:)
Probab=93.89 E-value=0.065 Score=31.15 Aligned_cols=70 Identities=13% Similarity=0.136 Sum_probs=46.5
Q ss_pred CCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCC-EEEEEECCCCC
Q ss_conf 01555554401210000222223433406421333100113662365302333023220345307453-38972178767
Q gi|254780919|r 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT-EVIYKVTDFYS 134 (198)
Q Consensus 56 lH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~-~i~Y~~~~~y~ 134 (198)
+|++.. +.-+++|++|++...+-|.. +....+.|.+ +.+++||+|+.|++...++.. .++-.++..+.
T Consensus 90 ~H~H~~---~eE~~yVl~G~~~~~~gd~~------~~~~~~~l~~--GD~i~ip~g~~H~~~N~~~~~~~~l~v~~~~~~ 158 (190)
T 1x82_A 90 FHAKLD---RAEVYVALKGKGGXLLQTPE------GDAKWISXEP--GTVVYVPPYWAHRTVNIGDEPFIFLAIYPADAG 158 (190)
T ss_dssp BCSSTT---CCEEEEEEESCEEEEEECTT------CCEEEEEECT--TCEEEECTTCEEEEEECSSSCEEEEEEEETTCC
T ss_pred ECCCCC---CCEEEEEEEEEEEEEEEEEC------CCCEEEEECC--CCEEEECCCCEEEEEECCCCCEEEEEEECCCCC
T ss_conf 789999---71599999667999998525------8758999669--969998698407667389899899999918978
Q ss_pred CH
Q ss_conf 10
Q gi|254780919|r 135 VE 136 (198)
Q Consensus 135 p~ 136 (198)
++
T Consensus 159 ~~ 160 (190)
T 1x82_A 159 HD 160 (190)
T ss_dssp CB
T ss_pred CC
T ss_conf 86
No 37
>>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 2.00A {Streptococcus pyogenes m1 gas} (A:)
Probab=93.80 E-value=0.093 Score=30.24 Aligned_cols=64 Identities=20% Similarity=0.267 Sum_probs=47.0
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|...+.|.+. ..-+++|++|++...+=| ..+.|.+ +..+++|+|..|++...++...+...
T Consensus 48 ~pg~~~~~H~H~----~~e~~~v~~G~~~~~~~~-----------~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~~~ 110 (115)
T 1yhf_A 48 DKGQEIGRHSSP----GDAXVTILSGLAEITIDQ-----------ETYRVAE--GQTIVXPAGIPHALYAVEAFQXLLVV 110 (115)
T ss_dssp CTTCEEEEECCS----SEEEEEEEESEEEEEETT-----------EEEEEET--TCEEEECTTSCEEEEESSCEEEEEEE
T ss_pred CCCCCCCEEECC----CCEEEEEEEEEEEEEEEE-----------EEEECCC--CEEEECCCCCEEEEEECCCCEEEEEE
T ss_conf 999812228899----879999997689999866-----------9997377--48999789973997979994999999
Q ss_pred E
Q ss_conf 1
Q gi|254780919|r 129 V 129 (198)
Q Consensus 129 ~ 129 (198)
+
T Consensus 111 v 111 (115)
T 1yhf_A 111 V 111 (115)
T ss_dssp E
T ss_pred E
T ss_conf 8
No 38
>>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant protein; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A (A:1-338)
Probab=93.80 E-value=0.3 Score=27.32 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=67.7
Q ss_pred ECCEEEECCCEEEEEECH--HHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHC--CC
Q ss_conf 076220379504211088--98986799874134423312520000000155555440121000022222343340--64
Q gi|254780919|r 10 KTRKFEDSRGWFSQTYSS--KLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDI--RR 85 (198)
Q Consensus 10 ~~~~f~D~RG~f~e~f~~--~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDl--R~ 85 (198)
+|..--..-|..+|.+.. ..+.-+|....+ + +.++|.++-.||...+ ++++|++|+...-+|-. ..
T Consensus 18 ~p~~~~~segg~~e~~~~~~~~l~~~gv~~~~----~--~i~p~gl~~Ph~~~A~----~i~~V~~G~g~~~~v~pg~~e 87 (338)
T 2d5f_A 18 EPDHRVESEGGLIETWNSQHPELQCAGVTVSK----R--TLNRNGLHLPSYSPYP----QMIIVVQGKGAIGFAFPGCPE 87 (338)
T ss_dssp CCCEEEECSSEEEEECCTTSHHHHHHTCEEEE----E--EECTTEEEEEEECSSC----EEEEEEECEEEEEECCTTCCC
T ss_pred CCCHHEECCCCEEEECCCCCHHHCCCCEEEEE----E--EECCCCEECCCCCCCC----EEEEEEECEEEEEEECCCCCC
T ss_conf 97023043773688679997243114502068----8--8757845167413898----689999377999987689823
Q ss_pred C-----------------HHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 2-----------------13331001136623653023330232203453074533897217
Q gi|254780919|r 86 N-----------------SPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVT 130 (198)
Q Consensus 86 ~-----------------SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~ 130 (198)
. +-+-.+-....|.. +..+.||+|.+|-.+.-.+.-.+....-
T Consensus 88 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--GDV~~iPaG~~~~~~N~g~~~lv~i~~~ 147 (338)
T 2d5f_A 88 TFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNE--GDVLVIPPGVPYWTYNTGDEPVVAISLL 147 (338)
T ss_dssp CEEECC-------------CSEEESCEEEEET--TEEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CEECCCCCCCCCCCCCCCCCCCCHHHEECCCC--CCEEEECCCCEEEEEECCCCCEEEEEEE
T ss_conf 00152212344455433333212331450477--8889978997489897899738999997
No 39
>>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii} (A:)
Probab=93.80 E-value=0.053 Score=31.68 Aligned_cols=70 Identities=10% Similarity=-0.048 Sum_probs=51.5
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|....+|.+.. ..+++|++|+...-+- ++-..+.|.+ +..+++|+|..|++.+.++.+.++..
T Consensus 54 ~pG~~~~~H~H~~----~e~~~vl~G~~~~~~~---------~~~~~~~l~~--Gd~~~~p~~~~H~~~~~~~~~~~~~v 118 (153)
T 3bal_A 54 PAGSSFASHIHAG----PGEYFLTKGKMEVRGG---------EQEGGSTAYA--PSYGFESSGALHGKTFFPVESQFYMT 118 (153)
T ss_dssp CTTEEECCEEESS----CEEEEEEESEEEETTC---------GGGTSEEEES--SEEEEECTTCEESCCEESSCEEEEEE
T ss_pred CCCCCCCCCEEEC----CEEEEEEEEEEEECCC---------CCCCCCEEEC--CCEEEECCCCEECCCCCCCCEEEEEE
T ss_conf 9998968864541----6799999579996058---------7577717706--83798469985744428987399999
Q ss_pred ECCCC
Q ss_conf 17876
Q gi|254780919|r 129 VTDFY 133 (198)
Q Consensus 129 ~~~~y 133 (198)
.+...
T Consensus 119 ~~~~~ 123 (153)
T 3bal_A 119 FLGPL 123 (153)
T ss_dssp EESCE
T ss_pred EECCE
T ss_conf 95784
No 40
>>3h8u_A Uncharacterized conserved protein with double- stranded beta-helix domain; YP_001338853.1, structural genomics; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} (A:)
Probab=93.62 E-value=0.1 Score=30.00 Aligned_cols=69 Identities=14% Similarity=0.048 Sum_probs=47.9
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEE-E
Q ss_conf 520000000155555440121000022222343340642133310011366236530233302322034530745338-9
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV-I 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i-~ 126 (198)
..+|.--++|.+.. ...+++|++|++...+-| -..+.|.+ +.+++||+|..|++...++.... +
T Consensus 46 ~~pG~~~~~H~H~~---~~e~~~vl~G~~~~~~~d----------g~~~~l~~--Gd~~~ip~~~~H~~~n~~~~~~~~l 110 (125)
T 3h8u_A 46 AHPGQEIASHVHPH---GQDTWTVISGEAEYHQGN----------GIVTHLKA--GDIAIAKPGQVHGAXNSGPEPFIFV 110 (125)
T ss_dssp ECTTCEECCC-CTT---CEEEEEEEECEEEEECST----------TCEEEEET--TEEEEECTTCCCEEEECSSSCEEEE
T ss_pred ECCCCCCCCCCCCC---CEEEEEEEECCEEEEECC----------CCCEEECC--CEEEECCCCCEEEEEECCCCCEEEE
T ss_conf 99997877624999---879999995880899614----------64202013--2255189999799798999999999
Q ss_pred EEECC
Q ss_conf 72178
Q gi|254780919|r 127 YKVTD 131 (198)
Q Consensus 127 Y~~~~ 131 (198)
...+-
T Consensus 111 ~v~~p 115 (125)
T 3h8u_A 111 SVVAP 115 (125)
T ss_dssp EEEES
T ss_pred EEECC
T ss_conf 99999
No 41
>>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} (A:20-214)
Probab=93.52 E-value=0.032 Score=32.91 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=62.2
Q ss_pred CEEEECCCEEEEE--ECHH--HHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCH
Q ss_conf 6220379504211--0889--89867998741344233125200000001555554401210000222223433406421
Q gi|254780919|r 12 RKFEDSRGWFSQT--YSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS 87 (198)
Q Consensus 12 ~~f~D~RG~f~e~--f~~~--~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~S 87 (198)
+++.-+-|.+..+ +... .+... -...+ ....+ .+|.++-.|++.. ..+++|++|+...-+++-...
T Consensus 5 ~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~--~~~~l--~pg~~~~phh~~a----~e~~yV~~G~~~v~~~~~~~~- 74 (195)
T 2phl_A 5 TLFKNQYGHIRVLQRFDQQSKRLQNL-EDYRL--VEFRS--KPETLLLPQQADA----ELLLVVRSGSAILVLVKPDDR- 74 (195)
T ss_dssp EEEEETTEEEEEECCHHHHCGGGGGG-TTCEE--EEEEE--CSSEEEEEEEESE----EEEEEEEESEEEEEEEETTTE-
T ss_pred CCEECCCCEEEEECCCCCCCHHHCCC-CCEEE--EEEEE--CCCCEECCCCCCC----CEEEEEEECEEEEEEEECCCC-
T ss_conf 63574894299750556428445365-31489--99996--7980788654799----859999938799999948995-
Q ss_pred HHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 3331001136623653023330232203453074533897
Q gi|254780919|r 88 PTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 88 pTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
.++.+..+..|. .+..++||+|.+|.+....++..+..
T Consensus 75 ~~~~~~~~~~l~--~Gdv~~iP~G~~H~~~N~~~~~~~~~ 112 (195)
T 2phl_A 75 REYFFLTSDNPI--FSDHQKIPAGTIFYLVNPDPKEDLRI 112 (195)
T ss_dssp EEEEEEESSCTT--SCSEEEECTTCEEEEEECCSSCCEEE
T ss_pred CEEEEEHHCCCC--CCCEEEECCCCEEEEEECCCCCEEEE
T ss_conf 345321004655--48879988998699995799935999
No 42
>>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor 2-oxoglutarate, asparaginyl hydroxylase,; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 1h2k_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1mze_A* 1mzf_A* 1iz3_A (A:33-306)
Probab=93.40 E-value=0.27 Score=27.60 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=56.3
Q ss_pred CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCC---------------H-----------
Q ss_conf 99874134423312520000000155555440121000022222343340642---------------1-----------
Q gi|254780919|r 34 GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRN---------------S----------- 87 (198)
Q Consensus 34 ~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~---------------S----------- 87 (198)
.......+.|.-++ ..|+.-.+|+.... -++..+.|+=...++..... |
T Consensus 145 ~~~~~~~~~~l~ig-~~gs~t~~H~D~~~----~~~~qi~G~K~w~L~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (274)
T 3d8c_A 145 RGWGQLTSNLLLIG-MEGNVTPAHYGEQQ----NFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYER 219 (274)
T ss_dssp TTCCCEEECEEEEE-CTTCEEEEECCSEE----EEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTT
T ss_pred CCCCCCCCEEEEEC-CCCCCCCCEECCCC----CEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHH
T ss_conf 33367760389981-89987740010234----40105642668699675335554656666777750013566724332
Q ss_pred -HHH--HHEEEEEEECCCCCEEEECCCCCEEEEEECCC---CEEEEEECCCC
Q ss_conf -333--10011366236530233302322034530745---33897217876
Q gi|254780919|r 88 -PTY--GCWVSLEISANNGLQIYIPTGFAHGFMTLEMN---TEVIYKVTDFY 133 (198)
Q Consensus 88 -pTf--gk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~---~~i~Y~~~~~y 133 (198)
|.+ -+...++|.+ |.+||||+|.+|-..++++. ..+.|...+.+
T Consensus 220 ~~~~~~~~~~~~~l~p--GD~LyiP~gw~H~v~~l~~~s~sisvn~~~~~~~ 269 (274)
T 3d8c_A 220 FPNFQNVVGYETVVGP--GDVLYIPMYWWHHIESLLNGGITITVNFWYKGAP 269 (274)
T ss_dssp CGGGGGCCEEEEEECT--TCEEEECTTCEEEEEECTTSCCEEEEEEEEECCC
T ss_pred CCCHHCCCCCEEEECC--CCEEEECCCCCEEEEECCCCCEEEEEEEECCCCC
T ss_conf 6103328742899889--9889868997489898689975999974047778
No 43
>>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} (A:)
Probab=93.37 E-value=0.083 Score=30.54 Aligned_cols=68 Identities=16% Similarity=0.131 Sum_probs=47.3
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|.-.++|.+... .-+++|++|+....+=|- ....+.|.+ +.++++|+|..|.+...++...+..
T Consensus 24 ~~pG~~~~~H~H~~~---~e~~~vl~G~~~~~~~~~--------~~~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~l 90 (98)
T 2ozi_A 24 LPPGSATGHHTHGXD---YVVVPXADGEXTIVAPDG--------TRSLAQLKT--GRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp ECTTEECCSEECCSC---EEEEESSCBC-CEECTTS--------CEECCCBCT--TCCEEECTTCEEEEEECSSSCEEEE
T ss_pred ECCCCCCCCEECCCC---EEEEEEECEEEEEECCCC--------CEEEEEEEE--EEEEEECCCCEEEEEECCCCEEEEE
T ss_conf 899987245777887---699999363999993897--------247987630--2579986998699397999709999
Q ss_pred E
Q ss_conf 2
Q gi|254780919|r 128 K 128 (198)
Q Consensus 128 ~ 128 (198)
.
T Consensus 91 ~ 91 (98)
T 2ozi_A 91 E 91 (98)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 44
>>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A (A:)
Probab=93.20 E-value=0.12 Score=29.53 Aligned_cols=67 Identities=22% Similarity=0.228 Sum_probs=46.4
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHH-HHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 520000000155555440121000022222343-3406421333100113662365302333023220345307453389
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA-VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvv-vDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
..+|...++|.+.. .-+++|++|+....+ .+- ..+.|.+ +.++++|+|..|+|...++.....
T Consensus 46 ~~pG~~~~~H~H~~----~e~~~vl~G~~~~~~~~~~----------~~~~l~~--Gd~i~~p~~~~H~~~n~~~~~~~~ 109 (145)
T 3ht1_A 46 VSPNGSTPPHFHEW----EHEIYVLEGSMGLVLPDQG----------RTEEVGP--GEAIFIPRGEPHGFVTGPGQTCRF 109 (145)
T ss_dssp EEEEEECCCEECSS----CEEEEEEEECEEEEEGGGT----------EEEEECT--TCEEEECTTCCBEEECCTTCCEEE
T ss_pred ECCCCCCCCCCCCC----CEEEEEEEEEEEEEECCCC----------CCEEECC--CEEEECCCCCEEEEEECCCCCEEE
T ss_conf 87654567310256----2199999976445512344----------3179436--547877999839989899999999
Q ss_pred EEEC
Q ss_conf 7217
Q gi|254780919|r 127 YKVT 130 (198)
Q Consensus 127 Y~~~ 130 (198)
..+.
T Consensus 110 l~i~ 113 (145)
T 3ht1_A 110 LVVA 113 (145)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9998
No 45
>>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.60A {Bacillus subtilis} (A:1-254)
Probab=93.13 E-value=0.17 Score=28.74 Aligned_cols=87 Identities=14% Similarity=0.071 Sum_probs=55.1
Q ss_pred CCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCH----------------------------
Q ss_conf 8741344233125200000001555554401210000222223433406421----------------------------
Q gi|254780919|r 36 QDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS---------------------------- 87 (198)
Q Consensus 36 ~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~S---------------------------- 87 (198)
.......++-++ .+|+.-++|+... .-++..+.|+-...+.......
T Consensus 137 ~~~~~~~~~~~g-~~g~~t~~H~D~~----~~~~~qi~G~K~w~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (254)
T 1vrb_A 137 AGTSSKAIVYAA-KNGGGFKAHFDAY----TNLIFQIQGEKTWKLAKNENVSNPXQHYDLSEAPYYPDDLQSYWKGDPPK 211 (254)
T ss_dssp TTCCEEEEEEEE-CSSCCCCSEECSS----EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCC
T ss_pred CCCCCCEEEEEC-CCCCCCCCCCCCC----CEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHH
T ss_conf 344343157634-7887662004776----43898733638999968754455566765333666623223331010613
Q ss_pred HHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 333100113662365302333023220345307453389721
Q gi|254780919|r 88 PTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129 (198)
Q Consensus 88 pTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 129 (198)
...-+...++|.+ |.+||||+|.+|--.+++++..+.+..
T Consensus 212 ~~~~~~~~~~l~p--GD~LyiP~gw~H~v~~~~~sisv~~~f 251 (254)
T 1vrb_A 212 EDLPDAEIVNLTP--GTXLYLPRGLWHSTKSDQATLALNITF 251 (254)
T ss_dssp TTCCSSEEEEECT--TCEEEECTTCEEEEECSSCEEEEEEEE
T ss_pred HHCCCCEEEEECC--CCEEEECCCCCEEEEECCCEEEEEEEE
T ss_conf 4147536999779--878997899727878658707999975
No 46
>>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} (A:)
Probab=92.96 E-value=0.036 Score=32.59 Aligned_cols=68 Identities=10% Similarity=-0.119 Sum_probs=47.9
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCC-CEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745-33897
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN-TEVIY 127 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~-~~i~Y 127 (198)
.+|...+.|.+. +.-+++|++|+....+.|- ++...+.|.+ +..+++|+|..|++...++. ..++.
T Consensus 88 ~pg~~~~~H~H~----~~E~~~Vl~G~~~~~~~~~-------~~~~~~~l~~--GD~i~~Pag~~H~~~n~~~~~~~~i~ 154 (179)
T 1zrr_A 88 LREKFLNEHTHG----EDEVRFFVEGAGLFCLHIG-------DEVFQVLCEK--NDLISVPAHTPHWFDMGSEPNFTAIR 154 (179)
T ss_dssp HHHHHHSCBEES----SCEEEEEEESCCCCCEECS-------SCEEEEECCC--SCEEEECTTCCBCCCCSSCSSCEEEE
T ss_pred HHHHHCCCEECC----CCEEEEEEECCEEEEEECC-------CEEEEEEECC--CCEEEECCCCEEECCCCCCCCEEEEE
T ss_conf 998733460289----8489999959199999459-------8089999748--98899699986812158998889999
Q ss_pred EE
Q ss_conf 21
Q gi|254780919|r 128 KV 129 (198)
Q Consensus 128 ~~ 129 (198)
..
T Consensus 155 v~ 156 (179)
T 1zrr_A 155 IF 156 (179)
T ss_dssp EE
T ss_pred EE
T ss_conf 86
No 47
>>2phd_A Gentisate 1,2-dioxygenase; beta-sandwich, oxidoreductase; 2.90A {Pseudaminobacter salicylatoxidans} (A:62-235)
Probab=92.92 E-value=0.11 Score=29.83 Aligned_cols=66 Identities=15% Similarity=0.034 Sum_probs=48.2
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|..-.+|.+. +...++|++|+...++.|- ..+.|.+ +..++||+|+.|.|...++.....+
T Consensus 49 i~pG~~~~~H~H~----~~e~~~vl~G~~~~~~~~~----------~~~~l~~--Gd~~~~p~g~~H~~~n~~~~~~~~l 112 (174)
T 2phd_A 49 LGPRETAPEHRHS----QNAFRFVVEGEGVWTVVNG----------DPVRMSR--GDLLLTPGWCFHGHMNDTDQPMAWI 112 (174)
T ss_dssp ECTTCEEEEEEES----SCEEEEEEECEEEEEEETT----------EEEEEET--TCEEEECTTCCEEEEECSSSCEEEE
T ss_pred ECCCCCCCCCCCC----CCEEEEEEECCCEEEEECC----------EEEEEEC--CCEEEECCCCEEEEEECCCCCEEEE
T ss_conf 7899827714152----0115899988856998899----------9998548--9989708995077375699878999
Q ss_pred EE
Q ss_conf 21
Q gi|254780919|r 128 KV 129 (198)
Q Consensus 128 ~~ 129 (198)
.+
T Consensus 113 ~v 114 (174)
T 2phd_A 113 DG 114 (174)
T ss_dssp EE
T ss_pred EE
T ss_conf 95
No 48
>>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis} (A:)
Probab=92.85 E-value=0.12 Score=29.69 Aligned_cols=79 Identities=9% Similarity=0.057 Sum_probs=55.5
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|.-.++|.+... .-++.|++|++...+.|...+..+.+ ..+.|.+ +.+++||+|..|.+...++...+..
T Consensus 76 ~~PG~~~~~H~H~~~---~e~~~vl~G~~~~~~~~~~~~~~~~~--~~~~l~~--Gd~~~ip~g~~H~~~N~g~~~~~~l 148 (171)
T 3eqe_A 76 IPPNKETTVHDHGQS---IGCAXVLEGKLLNSIYRSTGEHAELS--NSYFVHE--GECLISTKGLIHKXSNPTSERXVSL 148 (171)
T ss_dssp ECTTCBCCEECCTTC---EEEEEEEESEEEEEEEEECSSSEEEE--EEEEEET--TCEEEECTTCEEEEECCSSSCEEEE
T ss_pred ECCCCCCCCEECCCC---CEEEEEECCEEEEEEEEECCCCCCCC--CEEECCC--CCEEECCCCCEEEEECCCCCCEEEE
T ss_conf 899996676218998---18999823658999865136665555--1354158--8278628998688885999988999
Q ss_pred -EECCCC
Q ss_conf -217876
Q gi|254780919|r 128 -KVTDFY 133 (198)
Q Consensus 128 -~~~~~y 133 (198)
..+..|
T Consensus 149 ~v~spp~ 155 (171)
T 3eqe_A 149 HVYSPPL 155 (171)
T ss_dssp EEEESCC
T ss_pred EEECCCC
T ss_conf 9989997
No 49
>>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} (A:22-193)
Probab=92.50 E-value=0.22 Score=28.06 Aligned_cols=70 Identities=14% Similarity=0.145 Sum_probs=47.7
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.-...|.+.. ...+++|++|++...+-+ + ...|.+ +..++||+|..|++...++.......
T Consensus 33 ~pg~~~~~H~H~~---~~e~~~vl~G~~~~~~~g---------~--~~~l~~--Gd~v~ip~g~~H~~~n~~~~~~~~l~ 96 (172)
T 1y3t_A 33 GKGDAFPLHVHKD---THEGILVLDGKLELTLDG---------E--RYLLIS--GDYANIPAGTPHSYRMQSHRTRLVSY 96 (172)
T ss_dssp CTTCEEEEEECTT---CCEEEEEEESCEEEEETT---------E--EEEECT--TCEEEECTTCCEEEEECSTTEEEEEE
T ss_pred CCCCCCCCCCCCC---CEEEEEEEEEEEEEEECC---------E--EEEECC--CCEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 9999898656788---527999997289999798---------9--999738--98899589994899994898489999
Q ss_pred E-CCCCC
Q ss_conf 1-78767
Q gi|254780919|r 129 V-TDFYS 134 (198)
Q Consensus 129 ~-~~~y~ 134 (198)
+ +..+.
T Consensus 97 v~~~~~~ 103 (172)
T 1y3t_A 97 TMKGNVA 103 (172)
T ss_dssp EETTSST
T ss_pred ECCCCHH
T ss_conf 6798788
No 50
>>2yu1_A JMJC domain-containing histone demethylation protein 1A; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A (A:51-323)
Probab=92.41 E-value=0.26 Score=27.64 Aligned_cols=89 Identities=15% Similarity=0.080 Sum_probs=55.2
Q ss_pred EEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHH-------------------HHHHEEEEEEE
Q ss_conf 13442331252000000015555544012100002222234334064213-------------------33100113662
Q gi|254780919|r 39 FVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSP-------------------TYGCWVSLEIS 99 (198)
Q Consensus 39 ~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~Sp-------------------Tfgk~~~~~Ls 99 (198)
..+.+.-++. +|+.-++|.+.. ...-++.++.|+-...++..+...+ .......++|.
T Consensus 145 ~~~~~l~ig~-~~s~t~~h~d~d--~~~~~~~qi~G~K~w~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (273)
T 2yu1_A 145 KVQKYCLMSV-RGCYTDFHVDFG--GTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELK 221 (273)
T ss_dssp CCCCEEEEEC-TTCEEEEECCGG--GCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEEC
T ss_pred CCEEEEEEEC-CCCCCCEEECCC--CCEEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
T ss_conf 6358999806-999987438888--7510122320108999979986571213344577522766500103542899987
Q ss_pred CCCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 365302333023220345307453389721787
Q gi|254780919|r 100 ANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132 (198)
Q Consensus 100 ~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~ 132 (198)
+ |.+||||+|.+|.-.++++...+.+..-..
T Consensus 222 p--GD~lyiP~gw~H~v~~~~~sisv~~~f~~~ 252 (273)
T 2yu1_A 222 Q--GYTFVIPSGWIHAVYTPTDTLVFGGNFLHS 252 (273)
T ss_dssp T--TCEEEECTTCEEEEECSSCEEEEEEEECCS
T ss_pred C--CCEEEECCCCEEEEECCCCEEEEECCCCCC
T ss_conf 9--977983699638986454569980573783
No 51
>>1o4t_A Putative oxalate decarboxylase; TM1287, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.95A {Thermotoga maritima} (A:)
Probab=92.33 E-value=0.18 Score=28.65 Aligned_cols=63 Identities=16% Similarity=0.109 Sum_probs=47.2
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 2000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
.+|...+.|.+... ..+++|++|++...+=| ..+.|.+ +.++++|+|..|.+...++.....+
T Consensus 65 ~pG~~~~~h~h~~~---~e~~~Vl~G~~~~~~~~-----------~~~~l~~--GD~~~~p~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 65 PPGSSVGLHKHEGE---FEIYYILLGEGVFHDNG-----------KDVPIKA--GDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp CTTCEEEEEECCSE---EEEEEEEESEEEEEETT-----------EEEEEET--TEEEEECTTCEEEEECCSSSCEEEE
T ss_pred CCCCCCCCEECCCC---EEEEEEECCCEEEEECC-----------EEEECCC--CEEEEECCCCEEEEEECCCCCEEEE
T ss_conf 99987787988997---49999955839999999-----------8506689--8499999989899899999999999
No 52
>>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A (A:1-293)
Probab=92.31 E-value=0.17 Score=28.73 Aligned_cols=108 Identities=12% Similarity=0.094 Sum_probs=68.0
Q ss_pred EECCEEEECCCEEEEEECHHH--HHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHC--C
Q ss_conf 707622037950421108898--986799874134423312520000000155555440121000022222343340--6
Q gi|254780919|r 9 LKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDI--R 84 (198)
Q Consensus 9 i~~~~f~D~RG~f~e~f~~~~--~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDl--R 84 (198)
.++.......|-.+|.|..+. +.-+|.. . .-.. .++|.++=.|+...+ .+++|++|+...-+|-. +
T Consensus 35 ~~p~~~~~se~G~~e~~~~~~~~l~~~gvs--~--~~~~--i~P~gl~~Ph~~~a~----ei~yV~~G~g~~g~v~pg~~ 104 (293)
T 2e9q_A 35 QDPVRRAEAEAGFTEVWDQDNDEFQCAGVN--M--IRHT--IRPKGLLLPGFSNAP----KLIFVAQGFGIRGIAIPGCA 104 (293)
T ss_dssp BCCCEEEEETTEEEEECCTTSHHHHHHTEE--E--EEEE--ECTTEEEEEEEESSC----EEEEEEECEEEEEECCTTCC
T ss_pred CCCCCEEECCCCEEEECCCCCCHHCCCCEE--E--EEEE--ECCCCEECCCCCCCC----EEEEEEECEEEEEEECCCCH
T ss_conf 798440353686577658997043005702--3--7999--747835166301898----48999737799998768981
Q ss_pred C-------------CHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 4-------------2133310011366236530233302322034530745338972
Q gi|254780919|r 85 R-------------NSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 85 ~-------------~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
. ...+-++..+..|.. +..++||.|.+|--+...+.-.+...
T Consensus 105 et~~~~~~~~~~~~~~~~d~~~~~~~l~~--GDv~~iPaG~~h~~~N~g~~~l~~i~ 159 (293)
T 2e9q_A 105 ETYQTDLRRSQSAGSAFKDQHQKIRPFRE--GDLLVVPAGVSHWMYNRGQSDLVLIV 159 (293)
T ss_dssp CCEEECCC-------CCCEEECCCEEEET--TEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred HHHHCCCCCCCCCCCCCCCCCEEEEECCC--CCEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 44313111233334433322036874034--56799779982798978998589999
No 53
>>2opk_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.10A {Ralstonia eutropha JMP134} (A:)
Probab=92.20 E-value=0.22 Score=28.09 Aligned_cols=65 Identities=14% Similarity=0.189 Sum_probs=43.4
Q ss_pred CEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 0000001555554401210000222223433406421333100113662365302333023220345307453389721
Q gi|254780919|r 51 GTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129 (198)
Q Consensus 51 gvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 129 (198)
+.--++|++.. +...++|++|+....+ | +....+.|++ +.+++||+|..|.+...++....++++
T Consensus 42 ~~~~~~H~H~~---~~E~~~vl~G~~~i~~-~--------~~~~~~~~~~--Gd~v~ip~~~~H~~~N~g~~~~~v~l~ 106 (112)
T 2opk_A 42 ASPPGFWYDSP---QDEWVXVVSGSAGIEC-E--------GDTAPRVXRP--GDWLHVPAHCRHRVAWTDGGEPTVWLA 106 (112)
T ss_dssp CCCTTCCBCCS---SEEEEEEEESCEEEEE-T--------TCSSCEEECT--TEEEEECTTCCEEEEEECSSSCEEEEE
T ss_pred CCCCCEEEECC---CCEEEEEEECEEEEEE-C--------CCCEEEEECC--CCEEEECCCCCEEEEECCCCCCEEEEE
T ss_conf 89885726189---7269999928899998-6--------5518999279--999997899949866768999779999
No 54
>>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1, protein with A cupin-like fold and unknown function; HET: MSE; 1.91A {Novosphingobium aromaticivorans DSM12444} (A:41-172)
Probab=92.16 E-value=0.21 Score=28.27 Aligned_cols=67 Identities=12% Similarity=0.008 Sum_probs=47.0
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCE-EE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533-89
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE-VI 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~-i~ 126 (198)
..+|-...+|.+ ....+++|++|++...+-| + .+.|.+ +..+++|+|..|++...++... ++
T Consensus 46 ~~pG~~~~~h~H----~~~e~~~vl~G~~~~~~~~---------~--~~~l~~--Gd~~~~p~~~~H~~~N~~~~~~~~l 108 (132)
T 3es1_A 46 XLPGKESPXHRT----NSIDYGIVLEGEIELELDD---------G--AKRTVR--QGGIIVQRGTNHLWRNTTDKPCRIA 108 (132)
T ss_dssp ECTTCBCCCBCC----SEEEEEEEEESCEEEECGG---------G--CEEEEC--TTCEEEECSCCBEEECCSSSCEEEE
T ss_pred ECCCCCCCCCCC----CCEEEEEEEEEEEEEEECC---------C--CCEEEC--CCCEEEECCEEEEEEECCCCCEEEE
T ss_conf 479986666208----9741799998099999814---------3--118964--9998968994799799998979999
Q ss_pred EEECC
Q ss_conf 72178
Q gi|254780919|r 127 YKVTD 131 (198)
Q Consensus 127 Y~~~~ 131 (198)
...+.
T Consensus 109 ~v~~~ 113 (132)
T 3es1_A 109 FILIE 113 (132)
T ss_dssp EEEEE
T ss_pred EEEEC
T ss_conf 99917
No 55
>>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} (A:1-343)
Probab=92.15 E-value=0.39 Score=26.68 Aligned_cols=107 Identities=17% Similarity=0.131 Sum_probs=66.5
Q ss_pred EECCEEEECCCEEEEEECHH--HHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCC
Q ss_conf 70762203795042110889--8986799874134423312520000000155555440121000022222343340642
Q gi|254780919|r 9 LKTRKFEDSRGWFSQTYSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRN 86 (198)
Q Consensus 9 i~~~~f~D~RG~f~e~f~~~--~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~ 86 (198)
.+|..--..-|.++|+|..+ .|.-+|..... ..+ ++|-|..-||...| |+++|+.|+-..-+|-.- -
T Consensus 20 ~eP~~~~~segg~~E~~~~~~~qlqcagV~v~r----~~I--~~~gl~lP~y~~a~----~i~yV~qG~G~~giv~Pg-c 88 (343)
T 3c3v_A 20 QRPDNRIESEGGYIETWNPNNQEFECAGVALSR----LVL--RRNALRRPFYSNAP----QEIFIQQGRGYFGLIFPG-C 88 (343)
T ss_dssp BCCCEEEEETTEEEEECCTTSHHHHHHTCEEEE----EEE--CTTEEEEEEECSSC----EEEEEEECCEEEEEECTT-C
T ss_pred CCCCCCEECCCCEEEECCCCCCHHHCCCCEEEE----EEE--CCCCEECCCCCCCC----EEEEEEECEEEEEEECCC-C
T ss_conf 897320024786567359998222016713568----887--57845066536897----589998474899998379-8
Q ss_pred HHHHH----------------------------HE--EEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 13331----------------------------00--11366236530233302322034530745338972
Q gi|254780919|r 87 SPTYG----------------------------CW--VSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 87 SpTfg----------------------------k~--~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
+.||- .. ....| ..+..+-||+|++|-.+.-.+...+.-.
T Consensus 89 ~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~rl--r~GDV~aiPAG~~~w~yn~gn~~Lv~v~ 158 (343)
T 3c3v_A 89 PSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRF--NEGDLIAVPTGVAFWLYNDHDTDVVAVS 158 (343)
T ss_dssp CCCEEEECCC--------------------CEEEEESCCEEE--CTTEEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CCHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC--CCCCEEEECCCCEEEEEECCCCCEEEEE
T ss_conf 003206023034332334322333222100000110036842--6798899789854999858998679999
No 56
>>3cjx_A Protein of unknown function with A cupin-like fold; YP_298765.1, protein with A cupin-like fold and unknown function; HET: MSE; 2.60A {Ralstonia eutropha JMP134} (A:)
Probab=91.98 E-value=0.081 Score=30.58 Aligned_cols=59 Identities=27% Similarity=0.323 Sum_probs=44.0
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~ 124 (198)
..+|...++|.+. +..+++|++|++...+-+ ...|.+ +..+++|+|..|++...++...
T Consensus 50 ~~pG~~~~~H~H~----~~e~~~Vl~G~~~~~~~~------------~~~l~~--Gd~~~~p~g~~H~~~n~~~~~~ 108 (165)
T 3cjx_A 50 FAPGLTLPLHFHT----GTVHXYTISGCWYYTEYP------------GQKQTA--GCYLYEPGGSIHQFNTPRDNEG 108 (165)
T ss_dssp ECTTCBCCEEEES----SCEEEEEEESEEEETTCT------------TSCEET--TEEEEECTTCEECEECCTTCSS
T ss_pred ECCCCCCCCCEEC----CCEEEEEEEEEEEEECCC------------CEEECC--CEEEEECCCCCCCCCCCCCCCC
T ss_conf 8999813400605----660999996479864179------------728889--8489838987765535788887
No 57
>>2ozj_A Cupin 2, conserved barrel; EAT53321.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense dcb-2} (A:)
Probab=91.96 E-value=0.16 Score=28.92 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=46.6
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|..-+.|.+. ...+++|++|++...+-| ..+.|.+ +.++++|+|..|.+.+.++....+..
T Consensus 46 ~pg~~~~~H~H~----~~e~~~vl~G~~~~~~~~-----------~~~~l~~--Gd~~~i~~~~~H~~~n~~~~~~~~l~ 108 (114)
T 2ozj_A 46 ADGESVSEEEYF----GDTLYLILQGEAVITFDD-----------QKIDLVP--EDVLXVPAHKIHAIAGKGRFKXLQIT 108 (114)
T ss_dssp ETTSSCCCBCCS----SCEEEEEEEEEEEEEETT-----------EEEEECT--TCEEEECTTCCBEEEEEEEEEEEEEE
T ss_pred CCCCCCCCEECC----CCEEEEEEECEEEEEEEE-----------EEEEECC--CEEEEECCCCEEEEEECCCCEEEEEE
T ss_conf 999956838899----858999992979999986-----------8999147--68999459978998989996799999
No 58
>>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* (A:43-302)
Probab=91.86 E-value=0.3 Score=27.37 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=56.7
Q ss_pred EEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCH------------------HH-HHHEEEEEEE
Q ss_conf 1344233125200000001555554401210000222223433406421------------------33-3100113662
Q gi|254780919|r 39 FVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS------------------PT-YGCWVSLEIS 99 (198)
Q Consensus 39 ~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~S------------------pT-fgk~~~~~Ls 99 (198)
..+.+.-++ .+|+.-++|.+... ..-++..+.|+-...++...... .. +-+...++|.
T Consensus 132 ~~~~~l~ig-~~gs~t~~h~~~d~--~~~~~~~i~G~K~~~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 208 (260)
T 3kv9_A 132 FVQKYCLMG-VQDSYTDFHIDFGG--TSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVK 208 (260)
T ss_dssp CCSCEEEEE-CTTCEEEEECCGGG--CEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEE
T ss_pred CCEEEEEEC-CCCCCCCEEECCCC--CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEC
T ss_conf 725799984-89988986684899--847899973379999958974565435555555542213624535645999988
Q ss_pred CCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCC
Q ss_conf 36530233302322034530745338972178767
Q gi|254780919|r 100 ANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134 (198)
Q Consensus 100 ~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~ 134 (198)
+ |.+||||+|.+|--.++++...+.+......+
T Consensus 209 p--GD~LyiP~gw~H~v~~~~~sisvs~~~~~~~~ 241 (260)
T 3kv9_A 209 Q--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLN 241 (260)
T ss_dssp T--TCEEEECTTCEEEEEEEEEEEEEEEEECCSTT
T ss_pred C--CCEEEECCCCEEEEECCCCEEEEECCCCCCCC
T ss_conf 9--97898579970899606665898156667532
No 59
>>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* (D:134-393)
Probab=91.86 E-value=0.3 Score=27.37 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=57.0
Q ss_pred EEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCH------------------HH-HHHEEEEEEE
Q ss_conf 1344233125200000001555554401210000222223433406421------------------33-3100113662
Q gi|254780919|r 39 FVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS------------------PT-YGCWVSLEIS 99 (198)
Q Consensus 39 ~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~S------------------pT-fgk~~~~~Ls 99 (198)
..+.+.-++ .+|+.-++|.+... ..-++..+.|+-...++...... .. +-+...++|.
T Consensus 132 ~~~~~l~ig-~~gs~t~~h~~~d~--~~~~~~~i~G~K~~~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 208 (260)
T 3kv5_D 132 FVQKYCLMG-VQDSYTDFHIDFGG--TSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVK 208 (260)
T ss_dssp CCSCEEEEE-CTTCEEEEECCGGG--CEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEE
T ss_pred CEEEEEEEE-CCCCCCCEEECCCC--CEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCHHHCCCEEEEEEC
T ss_conf 706799993-49988862587898--715899873229999969873462112465666542100020213533999987
Q ss_pred CCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCC
Q ss_conf 36530233302322034530745338972178767
Q gi|254780919|r 100 ANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134 (198)
Q Consensus 100 ~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~ 134 (198)
+ |.+||||+|.+|--.++++...+.+......+
T Consensus 209 p--GD~LyiP~gw~H~v~~~~~sisvs~~~~~~~~ 241 (260)
T 3kv5_D 209 Q--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLN 241 (260)
T ss_dssp T--TCEEEECTTCEEEEEEEEEEEEEEEEECCSTT
T ss_pred C--CCEEEECCCCEEEEECCCCEEEECCCCCCCCC
T ss_conf 9--97899579944999846357997651577656
No 60
>>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSGXRC, structural genomics; 2.00A {Halorhodospira halophila SL1} (A:)
Probab=91.61 E-value=0.24 Score=27.84 Aligned_cols=65 Identities=14% Similarity=0.097 Sum_probs=46.9
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|..-++|.+. ...+++|++|++...+-| ..+.|.+ +.++++|+|..|++...+++..+.+.
T Consensus 64 ~pg~~~~~H~H~----~~E~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~~~ 126 (167)
T 3ibm_A 64 EPGGYTTLERHE----HTHVVMVVRGHAEVVLDD-----------RVEPLTP--LDCVYIAPHAWHQIHATGANEPLGFL 126 (167)
T ss_dssp CTTCBCCCBBCS----SCEEEEEEESEEEEEETT-----------EEEEECT--TCEEEECTTCCEEEEEESSSCCEEEE
T ss_pred CCCCCCCCEECC----CEEEEEEEECEEEEEECC-----------EEEECCC--CCEEEECCCCCEEEEECCCCCCEEEE
T ss_conf 699737871021----029999990989999899-----------9986689--97999897996997979999899999
Q ss_pred EC
Q ss_conf 17
Q gi|254780919|r 129 VT 130 (198)
Q Consensus 129 ~~ 130 (198)
+.
T Consensus 127 ~~ 128 (167)
T 3ibm_A 127 CI 128 (167)
T ss_dssp EE
T ss_pred EE
T ss_conf 99
No 61
>>2fqp_A Hypothetical protein BP2299; NP_880937.1, structural genomics, joint center for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} (A:)
Probab=91.28 E-value=0.36 Score=26.86 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=47.5
Q ss_pred EEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEEC
Q ss_conf 44233125200000001555554401210000222223433406421333100113662365302333023220345307
Q gi|254780919|r 41 QDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120 (198)
Q Consensus 41 Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~ 120 (198)
+.....- .+|.-.++|++.. ..-+++|++|+....+-+ .-..+.|.+ +..++||+|..|++...+
T Consensus 19 ~~~~~~~-~pg~~~~~H~H~~---~~e~~~vl~G~~~~~~~~---------~~~~~~l~~--Gd~~~ip~~~~H~~~N~~ 83 (97)
T 2fqp_A 19 KVTEWRF-PPGGETGWHRHSX---DYVVVPXTTGPLLLETPE---------GSVTSQLTR--GVSYTRPEGVEHNVINPS 83 (97)
T ss_dssp EEEEEEE-CTTCBCCSEECCS---CEEEEESSCEEEEEEETT---------EEEEEEECT--TCCEEECTTCEEEEECCS
T ss_pred EEEEEEE-CCCCCCCCEECCC---CEEEEEEECCEEEEEECC---------CCEEEEECC--CEEEEEECCEEEEEEECC
T ss_conf 9999998-5777736312268---749999989899999876---------515888536--529999578089999899
Q ss_pred CCCEEE
Q ss_conf 453389
Q gi|254780919|r 121 MNTEVI 126 (198)
Q Consensus 121 d~~~i~ 126 (198)
+.....
T Consensus 84 ~~~~~~ 89 (97)
T 2fqp_A 84 DTEFVF 89 (97)
T ss_dssp SSCEEE
T ss_pred CCEEEE
T ss_conf 955999
No 62
>>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PSI-2, protein structure initiative; 2.50A {Neisseria meningitidis} (A:)
Probab=91.22 E-value=0.22 Score=28.14 Aligned_cols=65 Identities=17% Similarity=0.064 Sum_probs=46.0
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
.++|-...+|.+.. ...+++|++|+...-+.|= ..+.|.+ +..++||+|..|.+...++...+..
T Consensus 34 ~~pg~~~~~H~H~~---~~E~~~vl~G~~~v~~~~~----------~~~~l~~--Gd~i~ip~g~~H~~~n~~~~~~~~l 98 (107)
T 2i45_A 34 VKLLGDYGWHTHGY---SDKVLFAVEGDXAVDFADG----------GSXTIRE--GEXAVVPKSVSHRPRSENGCSLVLI 98 (107)
T ss_dssp EEEEEECCCBCC-----CCEEEEESSSCEEEEETTS----------CEEEECT--TEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEECCCCCCEECCC---CCEEEEEEEEEEEEEECCC----------EEEEECC--CCEEECCCCCCCCCCCCCCCEEEEE
T ss_conf 99799547769999---8569999701999998885----------2899518--9889807999682538999469999
No 63
>>2q30_A Uncharacterized protein; YP_388795.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} (A:)
Probab=91.15 E-value=0.52 Score=25.95 Aligned_cols=64 Identities=11% Similarity=0.086 Sum_probs=45.7
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
.+|....+|.+..+ ...+++|++|++...+-| -..+.|.+ +..+++|+|..|.+.+.++...++
T Consensus 41 ~pG~~~~~h~H~~~--~~e~~~vl~G~~~v~~~g----------~~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~ 104 (110)
T 2q30_A 41 KAGQELPVHSHNIE--GELNIVVLEGEGEFVGDG----------DAVIPAPR--GAVLVAPISTPHGVRAVTDXKVLV 104 (110)
T ss_dssp CTTCEEEEECCSSS--CEEEEEEEESCEEEECGG----------GCEEEECT--TEEEEEETTSCEEEEESSSEEEEE
T ss_pred CCCCCCCCCCCCCC--CEEEEEEECCEEEEEECC----------CEEEEECC--CCEEEECCCCEEEEEECCCCEEEE
T ss_conf 79965466246653--239999965809999689----------23069549--979998799979999899989999
No 64
>>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} (A:77-192)
Probab=91.10 E-value=0.58 Score=25.67 Aligned_cols=65 Identities=9% Similarity=-0.007 Sum_probs=44.9
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.-...|.+..+ ...+++|++|++...+=+ ..+.|.+ +.++++|+|+.|++...++.......
T Consensus 36 ~pG~~~~~~~h~h~--~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~i~~p~~~~H~~~n~~~~~~~~l~ 100 (116)
T 1y9q_A 36 LDHHQQXSSPHALG--VIEYIHVLEGIXKVFFDE-----------QWHELQQ--GEHIRFFSDQPHGYAAVTEKAVFQNI 100 (116)
T ss_dssp CTTCEEEECCCSTT--CEEEEEEEESCEEEEETT-----------EEEEECT--TCEEEEECSSSEEEEESSSCEEEEEE
T ss_pred EECCCCCCCCCCCC--CEEEEEEEEEEEEEEECC-----------EEEEECC--CCEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 53135665210036--367999999999999999-----------9999789--97899879998886968978899999
No 65
>>3fjs_A Uncharacterized protein with RMLC-like cupin fold; YP_298287.1, protein of unknown function with RMLC-like cupin fold; HET: MSE; 1.90A {Ralstonia eutropha JMP134} (A:)
Probab=91.10 E-value=0.48 Score=26.17 Aligned_cols=63 Identities=16% Similarity=0.250 Sum_probs=45.8
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|....+|.+. ...+++|++|++...+-| ..+.|.+ +..++||+|..|++...++.....+.
T Consensus 44 ~~g~~~~~H~H~----~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~~~ip~~~~H~~~n~~~~~~~~l~ 106 (114)
T 3fjs_A 44 PAGKQVGSHSVA----GPSTIQCLEGEVEIGVDG-----------AQRRLHQ--GDLLYLGAGAAHDVNAITNTSLLVTV 106 (114)
T ss_dssp CTTCEEEEECCS----SCEEEEEEESCEEEEETT-----------EEEEECT--TEEEEECTTCCEEEEESSSEEEEEEE
T ss_pred CCCCCCCCEECC----CCEEEEEEECEEEEEEEE-----------EEEECCC--CEEEECCCCCEEEEEECCCCEEEEEE
T ss_conf 999847888999----968999994999999852-----------0398579--92998799996997988997899999
No 66
>>2pfw_A Cupin 2, conserved barrel domain protein; YP_751781.1, cupin domain, structural genomics; 1.90A {Shewanella frigidimarina ncimb 400} (A:)
Probab=90.99 E-value=0.34 Score=27.04 Aligned_cols=64 Identities=19% Similarity=0.254 Sum_probs=46.4
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.-.++|.+. +..+++|++|++...+-| ..+.|.+ +..++||+|..|.+.+.++. .++..
T Consensus 42 ~pg~~~~~H~H~----~~e~~~vl~G~~~~~~~~-----------~~~~l~~--Gd~~~ip~~~~H~~~~~~~~-~~~~i 103 (116)
T 2pfw_A 42 DKGAEGYVHAHR----HSQVSYVVEGEFHVNVDG-----------VIKVLTA--GDSFFVPPHVDHGAVCPTGG-ILIDT 103 (116)
T ss_dssp CTTEEEEEECCS----SEEEEEEEEECEEEEETT-----------EEEEECT--TCEEEECTTCCEEEEESSCE-EEEEE
T ss_pred CCCCCCCCEECC----CCEEEEEEECEEEEEECC-----------EEEECCC--CEEEECCCCCEEEEEECCCE-EEEEE
T ss_conf 999847889898----715999996969999899-----------9986479--98999999986944979993-99999
Q ss_pred EC
Q ss_conf 17
Q gi|254780919|r 129 VT 130 (198)
Q Consensus 129 ~~ 130 (198)
+.
T Consensus 104 ~~ 105 (116)
T 2pfw_A 104 FS 105 (116)
T ss_dssp EE
T ss_pred EC
T ss_conf 89
No 67
>>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structure initiative; 1.85A {Rhodopseudomonas palustris tie-1} (A:)
Probab=90.91 E-value=0.31 Score=27.26 Aligned_cols=63 Identities=16% Similarity=0.096 Sum_probs=44.9
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.--++|.+. ...+++|++|++...+=+ ..+.|.+ +..++||+|..|.+...++.....+.
T Consensus 52 ~pG~~~~~H~H~----~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~~~ip~g~~H~~~n~~~~~~~~l~ 114 (156)
T 3kgz_A 52 DEGGYSTLERHA----HVHAVMIHRGHGQCLVGE-----------TISDVAQ--GDLVFIPPMTWHQFRANRGDCLGFLC 114 (156)
T ss_dssp EEEEECCCBBCS----SCEEEEEEEEEEEEEETT-----------EEEEEET--TCEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEECCCCCCC----CCEEEEEEECEEEEECCC-----------EEEEECC--CEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 999264354686----519999997854897399-----------9998025--56998599981997958999899999
No 68
>>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein structure initiative; 2.05A {Enterococcus faecalis V583} (A:40-160)
Probab=90.80 E-value=0.27 Score=27.61 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=46.1
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|-....|.+.. .+..+++|++|++...+-| ..+.|.+ +..+++|+|..|++...++....++.
T Consensus 31 ~pg~~~~~~~H~h--~~~e~~~vl~G~~~~~~~~-----------~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~l~ 95 (121)
T 1sef_A 31 HKNGQQTTGFGGD--GIQTLVYVIDGRLRVSDGQ-----------ETHELEA--GGYAYFTPEMKMYLANAQEADTEVFL 95 (121)
T ss_dssp EEEEEECSCSSBT--TEEEEEEEEESEEEEECSS-----------CEEEEET--TEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CCCCCCCCCCCCC--CCEEEEEEEECEEEEEECC-----------EEEEECC--CCEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 7797268888899--8379999995989999999-----------9999789--99999889985999968999889999
Q ss_pred EC
Q ss_conf 17
Q gi|254780919|r 129 VT 130 (198)
Q Consensus 129 ~~ 130 (198)
+-
T Consensus 96 v~ 97 (121)
T 1sef_A 96 YK 97 (121)
T ss_dssp EE
T ss_pred EE
T ss_conf 99
No 69
>>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, protein structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum atcc 11170} (A:)
Probab=90.72 E-value=0.37 Score=26.81 Aligned_cols=62 Identities=16% Similarity=0.032 Sum_probs=45.5
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 5200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
..+|.-.++|.+. +..+++|++|++...+=| ....|.+ +..+++|+|..|++...++.....
T Consensus 60 ~~pg~~~~~H~H~----~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~ 121 (166)
T 3jzv_A 60 VGPGGHSTLERHQ----HAHGVXILKGRGHAXVGR-----------AVSAVAP--YDLVTIPGWSWHQFRAPADEALGF 121 (166)
T ss_dssp EEEEEECCCBBCS----SCEEEEEEEECEEEEETT-----------EEEEECT--TCEEEECTTCCEEEECCTTSCEEE
T ss_pred ECCCCCCCCCCCC----CEEEEEEEECCEEEEECC-----------EEEEECC--CCEEEECCCCCEEEEECCCCCEEE
T ss_conf 8999336353465----309999998710798612-----------6888469--978997899849989799999999
No 70
>>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha subunit; ZP_00243239.1, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum PM1} (A:)
Probab=90.47 E-value=0.13 Score=29.35 Aligned_cols=63 Identities=11% Similarity=-0.102 Sum_probs=48.5
Q ss_pred ECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEE
Q ss_conf 12520000000155555440121000022222343340642133310011366236530233302322034530745338
Q gi|254780919|r 46 FSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125 (198)
Q Consensus 46 ~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i 125 (198)
+...+|.....|.+.. .-.++|++|++.+-..+++++ ..+++|+|.-|++.+.++.+..
T Consensus 49 ~~~~pG~~~p~H~H~~----~e~~~Vl~G~~~~~~~~~~~G-----------------d~~~~p~g~~H~~~~~~~~~~~ 107 (145)
T 2o1q_A 49 FDCPAGSSFAAHVHVG----PGEYFLTKGKXDVRGGKAAGG-----------------DTAIAPGYGYESANARHDKTEF 107 (145)
T ss_dssp EEECTTEEECCEEESS----CEEEEEEEEEEEETTCGGGTS-----------------EEEESSEEEEECTTCEESCCEE
T ss_pred EEECCCCCCCCCCCCC----CEEEEEEEEEEEECCCCCCCC-----------------CEEECCCEEEECCCCEECCEEC
T ss_conf 9967874838985413----789999942798177874798-----------------2787893778379986742458
Q ss_pred EEEE
Q ss_conf 9721
Q gi|254780919|r 126 IYKV 129 (198)
Q Consensus 126 ~Y~~ 129 (198)
...|
T Consensus 108 ~~~~ 111 (145)
T 2o1q_A 108 PVAS 111 (145)
T ss_dssp EEEE
T ss_pred CCCE
T ss_conf 9987
No 71
>>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A (A:)
Probab=90.16 E-value=0.47 Score=26.18 Aligned_cols=70 Identities=17% Similarity=0.027 Sum_probs=44.4
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.-.+.|.+..+. ..-+++|++|++...+=+ ..+.|.+ +.+++||+|..|.+...++.....+.
T Consensus 29 ~pg~~~~~~~H~h~~-~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~~~i~~~~~H~~~n~~~~~~~~l~ 94 (113)
T 2gu9_A 29 APGDREGGPDNRHRG-ADQWLFVVDGAGEAIVDG-----------HTQALQA--GSLIAIERGQAHEIRNTGDTPLKTVN 94 (113)
T ss_dssp CTTCEEECCCSSSCC-CEEEEEEEECCEEEEETT-----------EEEEECT--TEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCCCCCCCCEECCC-CCEEEEEEECCEEEEEEE-----------EEEECCC--CEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 899706786406899-718999997977899874-----------2000234--50566479966998979999999999
Q ss_pred ECCC
Q ss_conf 1787
Q gi|254780919|r 129 VTDF 132 (198)
Q Consensus 129 ~~~~ 132 (198)
+...
T Consensus 95 v~~~ 98 (113)
T 2gu9_A 95 FYHP 98 (113)
T ss_dssp EEES
T ss_pred EECC
T ss_conf 9989
No 72
>>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} (A:77-198)
Probab=90.10 E-value=0.3 Score=27.34 Aligned_cols=56 Identities=13% Similarity=0.117 Sum_probs=38.3
Q ss_pred CHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 40121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 64 ~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
+...+++|++|++...+-|-. .-....|.+ +.++++|+|..|+|...+++..+.+.
T Consensus 63 ~~~E~~~Vl~G~~~v~~~d~~-------~~~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~~l 118 (122)
T 2bnm_A 63 AGNEFLFVLEGEIHMKWGDKE-------NPKEALLPT--GASMFVEEHVPHAFTAAKGTGSAKLI 118 (122)
T ss_dssp SSCEEEEEEESCEEEEESCTT-------SCEEEEECT--TCEEEECTTCCEEEEESTTSCCEEEE
T ss_pred CCEEEEEEEECCEEEEECCCC-------CCEEEEECC--CCEEEECCCCCEEEECCCCCCEEEEE
T ss_conf 867999999321299953325-------634899899--98899889999898838999519999
No 73
>>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, alternative splicing, mental retardation, metal-binding; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 2wwu_A* (A:1-274)
Probab=90.05 E-value=0.33 Score=27.12 Aligned_cols=86 Identities=14% Similarity=0.089 Sum_probs=52.1
Q ss_pred EEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHH------------------CCCCH-HHHHHEEEEEEE
Q ss_conf 13442331252000000015555544012100002222234334------------------06421-333100113662
Q gi|254780919|r 39 FVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVD------------------IRRNS-PTYGCWVSLEIS 99 (198)
Q Consensus 39 ~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvD------------------lR~~S-pTfgk~~~~~Ls 99 (198)
..+.++-++ .+|+.-++|.+.. ...-++..+.|+-...+.. ..+.. ...-+...++|.
T Consensus 146 ~~~~~~~~g-~~gs~t~~H~d~~--~~~~~~~~i~G~K~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (274)
T 3k3o_A 146 NVQKYCLMS-VRDSYTDFHIDFG--GTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVK 222 (274)
T ss_dssp CCSCEEEEE-CTTEEEEEECCGG--GCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEE
T ss_pred CCEEEEEEE-CCCCCCCEEECCC--CCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHCCCEEEEEEC
T ss_conf 753689997-8999998778899--9856899952438999968750355555555664145554304424735999988
Q ss_pred CCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 365302333023220345307453389721
Q gi|254780919|r 100 ANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129 (198)
Q Consensus 100 ~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 129 (198)
+ |.+||||+|.+|--.++++...+.+..
T Consensus 223 p--GD~LyiP~gw~H~v~~~~~sis~~~nf 250 (274)
T 3k3o_A 223 Q--GQTLFIPTGWIHAVLTPVDCLAFGGNF 250 (274)
T ss_dssp T--TCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred C--CCEEEECCCCEEEEECCCCEEEECCCC
T ss_conf 9--988986899648987587879983654
No 74
>>1v70_A Probable antibiotics synthesis protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.30A {Thermus thermophilus HB8} (A:)
Probab=89.89 E-value=0.48 Score=26.13 Aligned_cols=64 Identities=14% Similarity=0.277 Sum_probs=46.1
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.-...|.+.. ...+++|++|++...+-| ..+.|.+ +..+++|+|..|.+...++.....+.
T Consensus 36 ~pg~~~~~h~h~~---~~e~~~vl~G~~~~~~~~-----------~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~i~ 99 (105)
T 1v70_A 36 LPGQAQKVHVHEG---SDKVYYALEGEVVVRVGE-----------EEALLAP--GMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp CTTCEEEEECCSS---CEEEEEEEESCEEEEETT-----------EEEEECT--TCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred CCCCCCCCEECCC---CCEEEEEEECEEEEEEEE-----------EEEEECC--EEEEEECCCCEEEEEECCCCCEEEEE
T ss_conf 9998986779899---849999994899999816-----------6799511--27999479997997999999999999
No 75
>>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal-kingston bacterial structural genomics initiative; 2.41A {Escherichia coli O157} (A:72-229)
Probab=89.29 E-value=0.39 Score=26.70 Aligned_cols=63 Identities=17% Similarity=0.035 Sum_probs=45.8
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 2000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
.+|.-.++|.|.. ..+++|++|++.....+ -..+.|.+ +.+++||+|+.|.+...++....+.
T Consensus 37 ~pG~~~~~H~H~~----~e~~~v~~G~~~~~~~~----------~~~~~l~~--Gd~~~ip~g~~H~~~n~~~~~~~~l 99 (158)
T 2d40_A 37 XPGEVAPSHRHNQ----SALRFIVEGKGAFTAVD----------GERTPXNE--GDFILTPQWRWHDHGNPGDEPVIWL 99 (158)
T ss_dssp CTTCEEEEEEESS----CEEEEEEECSSCEEEET----------TEEEECCT--TCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CCCCCCCCCCCCC----CEEEEEEECCEEEEEEC----------CEEEEEEC--CCEEECCCCCEEEEEECCCCCEEEE
T ss_conf 8998577044766----13689998944899888----------97888508--9989818997488682799878999
No 76
>>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens} (A:74-358)
Probab=89.01 E-value=0.93 Score=24.50 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=51.5
Q ss_pred EEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCC-----------------HH--HHHHEEEEEEEC
Q ss_conf 34423312520000000155555440121000022222343340642-----------------13--331001136623
Q gi|254780919|r 40 VQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRN-----------------SP--TYGCWVSLEISA 100 (198)
Q Consensus 40 ~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~-----------------Sp--Tfgk~~~~~Ls~ 100 (198)
.+.+.-++ .+|+.-++|.+.. ...-++.++.|+=...+...... -+ ..-+...++|.+
T Consensus 158 ~~~~~~~g-~~gs~t~~h~d~d--~~~~~~~qi~G~K~w~l~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~p 234 (285)
T 3kv4_A 158 VQKYCLMS-VRDSYTDFHIDFG--GTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQ 234 (285)
T ss_dssp CSCEEEEE-CTTEEEEEECCGG--GCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEET
T ss_pred CEEEEEEE-CCCCCCCEEECCC--CCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECC
T ss_conf 65699993-8998886378899--98377887676699999589866734244555664023321420156259999889
Q ss_pred CCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 6530233302322034530745338972
Q gi|254780919|r 101 NNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 101 ~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
|.+||||+|.+|--.++++...+...
T Consensus 235 --GD~LyiP~gw~H~V~~~~~s~sv~~~ 260 (285)
T 3kv4_A 235 --GQTLFIPTGWIHAVLTPVDCLAFGGN 260 (285)
T ss_dssp --TCEEEECTTCEEEEEESSCEEEEEEE
T ss_pred --CCEEEECCCCEEEEECCCCEEEECCC
T ss_conf --98899689964999747787997565
No 77
>>2q1z_B Anti-sigma factor CHRR, transcriptional activator CHRR; ECF sigma factor, cupin fold, zinc binding transcription factor; 2.40A {Rhodobacter sphaeroides 2} PDB: 2z2s_B (B:)
Probab=88.99 E-value=0.3 Score=27.34 Aligned_cols=61 Identities=13% Similarity=-0.005 Sum_probs=44.6
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
..+|.-.-+|.+.. ...++|++|+..+-..++++ +..+++|+|..|.+.+.+|...++.
T Consensus 132 ~~~g~~~~~H~H~~----~e~~~vl~G~~~~~~~~~~~-----------------Gd~~~~p~~~~H~~~~~~~~~~~~l 190 (195)
T 2q1z_B 132 IPGGQAVPDHGHRG----LELTLVLQGAFRDETDRFGA-----------------GDIEIADQELEHTPVAERGLDCICL 190 (195)
T ss_dssp ECTTCBCCCCCCSS----CEEEEEEESEEECSSSEEET-----------------TCEEEECSSCCCCCEECSSSCEEEE
T ss_pred ECCCCCCEEEEECC----CEEEEEEEEEEEECCCCCCC-----------------CEEEECCCCCCCCCCCCCCCCEEEE
T ss_conf 88997212556037----48999988899989986989-----------------8699849889547344899987999
Q ss_pred EE
Q ss_conf 21
Q gi|254780919|r 128 KV 129 (198)
Q Consensus 128 ~~ 129 (198)
.+
T Consensus 191 ~v 192 (195)
T 2q1z_B 191 AA 192 (195)
T ss_dssp EE
T ss_pred EE
T ss_conf 98
No 78
>>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protein structure initiative; 2.70A {Pseudomonas aeruginosa} (A:44-163)
Probab=88.27 E-value=0.51 Score=25.99 Aligned_cols=73 Identities=11% Similarity=0.023 Sum_probs=46.9
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.-...|.+... ..-+++|++|++...+-+ ..+.|.+ +..++||+|..|.|...++.......
T Consensus 33 ~pg~~~~~~~h~~~--~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~~~ip~~~~H~~~n~~~~~~~~l~ 97 (120)
T 1sq4_A 33 APNGGSDKPEQDPN--AEAVLFVVEGELSLTLQG-----------QVHAXQP--GGYAFIPPGADYKVRNTTGQHTRFHW 97 (120)
T ss_dssp EEEEEESSCCCCTT--EEEEEEEEESCEEEEESS-----------CEEEECT--TEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCCCCCCCCCCCC--CEEEEEEEECEEEEEECC-----------EEEEECC--CCEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 78985677778888--589999997989999999-----------9999259--99999799995898978999899999
Q ss_pred ECCCCCCH
Q ss_conf 17876710
Q gi|254780919|r 129 VTDFYSVE 136 (198)
Q Consensus 129 ~~~~y~p~ 136 (198)
+-..+.+.
T Consensus 98 i~~~~~~~ 105 (120)
T 1sq4_A 98 IRKHYQKV 105 (120)
T ss_dssp EEEECCCC
T ss_pred EECCCCCC
T ss_conf 98456555
No 79
>>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI- cupin, double stranded beta helix; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* (A:14-122)
Probab=87.67 E-value=0.85 Score=24.72 Aligned_cols=64 Identities=16% Similarity=0.160 Sum_probs=44.3
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEE-ECCCCCEEEEEECCCCEEE
Q ss_conf 520000000155555440121000022222343340642133310011366236530233-3023220345307453389
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIY-IPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~-IP~G~aHGf~~L~d~~~i~ 126 (198)
..+|.-..+|.+. +..+++|++|++...+=| ....|.+ +.+++ +|+|..|++...++.....
T Consensus 28 ~~pg~~~~~H~H~----~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~v~~~p~~~~H~~~n~~~~~~~~ 90 (109)
T 3h7j_A 28 VPPHTNVEPHQHK----EVQIGMVVSGELMMTVGD-----------VTRKMTA--LESAYIAPPHVPHGARNDTDQEVIA 90 (109)
T ss_dssp ECTTEEEEEECCS----SEEEEEEEESEEEEEETT-----------EEEEEET--TTCEEEECTTCCEEEEECSSSCEEE
T ss_pred ECCCCCCCCEECC----CCEEEEEEEEEEEEEECC-----------EEEEEEE--CCEEEEECCCCCEEEEECCCCEEEE
T ss_conf 9989875847888----306999999899999799-----------9999973--9889996899817869668970799
Q ss_pred EE
Q ss_conf 72
Q gi|254780919|r 127 YK 128 (198)
Q Consensus 127 Y~ 128 (198)
..
T Consensus 91 l~ 92 (109)
T 3h7j_A 91 ID 92 (109)
T ss_dssp EE
T ss_pred EE
T ss_conf 99
No 80
>>3k2o_A Bifunctional arginine demethylase and lysyl- hydroxylase JMJD6; structural genomics consortium, SGC, alternative splicing, chromatin regulator; 1.75A {Homo sapiens} (A:1-292)
Probab=87.24 E-value=1.1 Score=24.08 Aligned_cols=34 Identities=15% Similarity=0.333 Sum_probs=27.0
Q ss_pred HEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 001136623653023330232203453074533897
Q gi|254780919|r 92 CWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 92 k~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
....++|.+ |.+||||+|.+|--.++++...|.+
T Consensus 254 ~~~~~~l~p--GD~LyiP~gw~H~v~~~~~sisv~~ 287 (292)
T 3k2o_A 254 KPLEILQKP--GETVFVPGGWWHVVLNLDTTIAITQ 287 (292)
T ss_dssp CCEEEEECT--TCEEEECTTCEEEEEESSCEEEEEE
T ss_pred CEEEEEECC--CCEEEECCCCEEEEECCCCEEEEEC
T ss_conf 249999857--8669707997288875898699962
No 81
>>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein structure initiative; 2.46A {Deinococcus radiodurans} (A:27-139)
Probab=87.16 E-value=0.53 Score=25.92 Aligned_cols=64 Identities=9% Similarity=0.097 Sum_probs=43.6
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|.--..|- ...+++|++|++...+-| ..+.|.+ +.++++|+|..|.+...++....++.
T Consensus 32 ~pg~~~~~H~------~~e~~~Vl~G~~~~~~~~-----------~~~~l~~--Gd~i~~p~~~~H~~~n~~~~~~~~l~ 92 (113)
T 1sfn_A 32 PAGAQATESV------YQRFAFVLSGEVDVAVGG-----------ETRTLRE--YDYVYLPAGEKHMLTAKTDARVSVFE 92 (113)
T ss_dssp CTTCEEECCS------SEEEEEEEEEEEEEECSS-----------CEEEECT--TEEEEECTTCCCEEEEEEEEEEEEEE
T ss_pred CCCCCCCCCC------CCEEEEEEECEEEEEECC-----------EEEEEEC--CCEEEECCCCCEEEEECCCCEEEEEE
T ss_conf 9999898888------656899995989999999-----------9999708--99999689995899968996099999
Q ss_pred ECC
Q ss_conf 178
Q gi|254780919|r 129 VTD 131 (198)
Q Consensus 129 ~~~ 131 (198)
+..
T Consensus 93 v~~ 95 (113)
T 1sfn_A 93 KPY 95 (113)
T ss_dssp ECC
T ss_pred EEC
T ss_conf 731
No 82
>>2b8m_A Hypothetical protein MJ0764; 1499583, structural genomics, joint center for structural genomics, JCSG; 1.70A {Methanocaldococcus jannaschii} (A:)
Probab=87.12 E-value=0.66 Score=25.35 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=48.8
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCE-EE
Q ss_conf 52000000015555544012100002222234334064213331001136623653023330232203453074533-89
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE-VI 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~-i~ 126 (198)
..+|..-++|.+.. .-+++|++|+....+-|- ..+.|.+ +.+++||+|..|.+...++... ++
T Consensus 34 ~~pG~~~~~H~H~~----~e~~~vl~G~~~~~~~~~----------~~~~l~~--Gd~i~ip~~~~h~~~n~~~~~~~~l 97 (117)
T 2b8m_A 34 LPRGEQXPKHYSNS----YVHLIIIKGEXTLTLEDQ----------EPHNYKE--GNIVYVPFNVKXLIQNINSDILEFF 97 (117)
T ss_dssp EETTCBCCCEECSS----CEEEEEEESEEEEEETTS----------CCEEEET--TCEEEECTTCEEEEECCSSSEEEEE
T ss_pred ECCCCEEEEEECCC----CEEEEEEEEEEEEEEECC----------CEEEEEE--EEEEEECCCCEEEEEECCCCCEEEE
T ss_conf 89997533553897----159999971799998214----------3179862--2799833998599998999859999
Q ss_pred EEECCCCCC
Q ss_conf 721787671
Q gi|254780919|r 127 YKVTDFYSV 135 (198)
Q Consensus 127 Y~~~~~y~p 135 (198)
..++..+.+
T Consensus 98 ~v~~p~~~~ 106 (117)
T 2b8m_A 98 VVKAPHPKK 106 (117)
T ss_dssp EEECSCGGG
T ss_pred EEECCCCCC
T ss_conf 998979966
No 83
>>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, target T1521, PSI, protein structure initiative; 2.60A {Escherichia coli} (A:38-159)
Probab=86.97 E-value=0.84 Score=24.74 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=42.5
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCE
Q ss_conf 2000000015555544012100002222234334064213331001136623653023330232203453074533
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~ 124 (198)
.+|-....|.+.. .+..+++|++|++...+= | ..+.|.+ +.++++|+|..|++...+++..
T Consensus 30 ~pg~~~~~~~H~h--~~~e~~~Vl~G~~~~~~~---------~--~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~ 90 (122)
T 1rc6_A 30 HQNGGNQQGFGGE--GIETFLYVISGNITAKAE---------G--KTFALSE--GGYLYCPPGSLMTFVNAQAEDS 90 (122)
T ss_dssp EEEEEESSCSCCT--TEEEEEEEEESEEEEEET---------T--EEEEEET--TEEEEECTTCCCEEEECSSSCE
T ss_pred CCCCCCCCCCCCC--CCEEEEEEEECEEEEEEC---------C--EEEEECC--CCEEEECCCCCEEEEECCCCCE
T ss_conf 7897248878888--828999999588999999---------9--9999748--9899967999689998999988
No 84
>>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae} (A:)
Probab=86.68 E-value=0.72 Score=25.12 Aligned_cols=65 Identities=9% Similarity=-0.008 Sum_probs=42.2
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
.+|--..+|.+. +....+++|++|++...+ .-..+.|.+ +..+++|+|..|++...++....+..
T Consensus 96 ~pg~~~~~~~h~--~~~~e~~~Vl~G~~~~~~-----------~~~~~~l~~--Gd~i~~p~g~~H~~~n~~~~~~~~l~ 160 (166)
T 2vpv_A 96 PAISGQKKLSNS--FRTYITFHVIQGIVEVTV-----------CKNKFLSVK--GSTFQIPAFNEYAIANRGNDEAKMFF 160 (166)
T ss_dssp CSSGGGCEEEEC--CSEEEEEEEEESEEEEEE-----------TTEEEEEET--TCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CCCCCCCCCCCC--CCCEEEEEEEEEEEEEEE-----------CCEEEEECC--CCEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 899956877646--897899999970999998-----------999999799--98999889891998979999799999
No 85
>>3ebr_A Uncharacterized RMLC-like cupin; YP_294607.1, RMLC-like cupin with unknown function, structural genomics; 2.60A {Ralstonia eutropha JMP134} (A:)
Probab=86.66 E-value=0.61 Score=25.56 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=43.7
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCC-EEEE
Q ss_conf 200000001555554401210000222223433406421333100113662365302333023220345307453-3897
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT-EVIY 127 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~-~i~Y 127 (198)
.+|....+|.+. +..+++|++|++...+-+ ..|.+ +..+++|+|..|++...++.. .++.
T Consensus 50 ~pG~~~p~H~H~----~~e~~~Vl~G~~~~~~~~-------------~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~~l~ 110 (159)
T 3ebr_A 50 PAGXEXPRHHHT----GTVIVYTVQGSWRYKEHD-------------WVAHA--GSVVYETASTRHTPQSAYAEGPDIIT 110 (159)
T ss_dssp CSSCBCCCEEES----SCEEEEEEESCEEETTSS-------------CCBCT--TCEEEECSSEEECEEESSSSSSCEEE
T ss_pred CCCCCCCCCCCC----CCEEEEEEEEEEEEECCC-------------EEEEC--CEEEEECCCCCCCCCCCCCCCCEEEE
T ss_conf 999892004078----756999999899997899-------------86738--87999648862855356899821999
Q ss_pred E
Q ss_conf 2
Q gi|254780919|r 128 K 128 (198)
Q Consensus 128 ~ 128 (198)
.
T Consensus 111 i 111 (159)
T 3ebr_A 111 F 111 (159)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 86
>>3dxt_A JMJC domain-containing histone demethylation protein 3D; JMJD2D, histone demethylase, H3K9, jumonji domain- containing protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 2w2i_A* (A:1-314)
Probab=86.64 E-value=1.3 Score=23.64 Aligned_cols=100 Identities=16% Similarity=-0.024 Sum_probs=56.1
Q ss_pred HHHHHHCCCC-CCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCC--------------------
Q ss_conf 8989867998-7413442331252000000015555544012100002222234334064--------------------
Q gi|254780919|r 27 SKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRR-------------------- 85 (198)
Q Consensus 27 ~~~~~~~~~~-~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~-------------------- 85 (198)
.+.+...+.. ....+.++-+. .+|+.-++|+... .-.-+...+.|+=...++....
T Consensus 162 ~~~~~~~~~~~~~~~~~~l~iG-~~gs~t~~H~D~~--~~~~~~~~i~G~K~~~l~~P~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T 3dxt_A 162 DLLEKECGVVIEGVNTPYLYFG-MWKTTFAWHTEDM--DLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGC 238 (314)
T ss_dssp HHHHHHHCCCCCCCCCCEEEEE-CTTCEEEEECCGG--GCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHC
T ss_pred HHHHHHCCCCCCCCCCCEEEEE-CCCCCCCCCCCCC--CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHCHHHHHHC
T ss_conf 2466644888887541126730-4025556542566--550367998588548998088999999999998685645318
Q ss_pred ----------CHHHH---H--HEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf ----------21333---1--0011366236530233302322034530745338972178
Q gi|254780919|r 86 ----------NSPTY---G--CWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTD 131 (198)
Q Consensus 86 ----------~SpTf---g--k~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~ 131 (198)
.++.+ - +...++|.+ |..||||+|.+|...++++...+......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p--Gd~l~iP~gw~H~v~~~~~sisv~~nf~~ 297 (314)
T 3dxt_A 239 GAFLRHKVALISPTVLKENGIPFNRITQEA--GEFMVTFPYGYHAGFNHGFNCAEAINFAT 297 (314)
T ss_dssp TTGGGGCCEEECHHHHHHTTCCCEEEEECT--TCEEEECTTCEEEEEESSSEEEEEEEECC
T ss_pred HHHHCCCCCCCCHHHHHHCCCCEEEECCCC--CCEEEECCCEEEEEECCCCCCEEEEEECC
T ss_conf 898749774208999998899779813579--97799768707877426652022575066
No 87
>>3d82_A Cupin 2, conserved barrel domain protein; YP_752209.1, domain of unknown function with A cupin fold, structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} (A:)
Probab=85.82 E-value=0.8 Score=24.87 Aligned_cols=61 Identities=16% Similarity=0.104 Sum_probs=43.6
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEE
Q ss_conf 20000000155555440121000022222343340642133310011366236530233302322034530745338
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i 125 (198)
++|-...+|.+. .+..+++|++|++...+=+ ..+.|.+ +.++++|+|..|++...++....
T Consensus 37 ~pg~~~~~h~H~---~~~E~~~V~~G~~~~~i~~-----------~~~~l~~--Gd~~~~p~~~~H~~~n~~~~~~~ 97 (102)
T 3d82_A 37 KVEGEFVWHEHA---DTDEVFIVXEGTLQIAFRD-----------QNITLQA--GEXYVIPKGVEHKPXAKEECKIX 97 (102)
T ss_dssp EEEEECCCBCCT---TCCEEEEEEESEEEEECSS-----------CEEEEET--TEEEEECTTCCBEEEEEEEEEEE
T ss_pred ECCCCCCCEECC---CCEEEEEEEEEEEEEEECC-----------EEEECCC--CCEEEECCCCCEEEECCCCCEEE
T ss_conf 889846998998---9728999998799999987-----------9999248--80999999993854889995899
No 88
>>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, PSI-2, protein structure initiative; 2.31A {Bacteroides fragilis nctc 9343} (A:)
Probab=84.97 E-value=1.1 Score=24.17 Aligned_cols=95 Identities=11% Similarity=-0.005 Sum_probs=53.8
Q ss_pred EEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEE-EECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHH
Q ss_conf 22037950421108898986799874134423312520000-00015555544012100002222234334064213331
Q gi|254780919|r 13 KFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTI-RGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYG 91 (198)
Q Consensus 13 ~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvl-RGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfg 91 (198)
.....+|......-...... ..+.+. -.++ .+|-- .-.|.+.. ..-+++|++|++...+-+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~--~pg~~~~~~h~h~~---~~E~~~vl~G~~~~~~~~--------- 65 (125)
T 3cew_A 4 YQKXSVAQDARVELHDSLAL--TGAEVS--INHL--PAGAGVPFVHSHKQ---NEEIYGILSGKGFITIDG--------- 65 (125)
T ss_dssp EEEEECCTTCCEECHHHHTC--SSCEEE--EEEE--CTTCBCSSEEEESS---EEEEEEEEEEEEEEEETT---------
T ss_pred CCCCCCCCCCEEEEECCCCC--CCCEEE--EEEE--CCCCCCCCCEECCC---CCEEEEEEECCEEEEECC---------
T ss_conf 50032078654997206899--930999--9998--97995898889799---869999993737787312---------
Q ss_pred HEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 00113662365302333023220345307453389721
Q gi|254780919|r 92 CWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129 (198)
Q Consensus 92 k~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 129 (198)
....|.+ +.+++||+|..|.|...++.....+.+
T Consensus 66 --~~~~l~~--Gd~i~~p~~~~H~~~n~~~~~~~~l~v 99 (125)
T 3cew_A 66 --EKIELQA--GDWLRIAPDGKRQISAASDSPIGFLCI 99 (125)
T ss_dssp --EEEEEET--TEEEEECTTCCEEEEEBTTBCEEEEEE
T ss_pred --CCEEECH--HHEEECCCCCCEEEEECCCCCEEEEEE
T ss_conf --0116520--023511687417989799999999999
No 89
>>1juh_A Quercetin 2,3-dioxygenase; copper, cupin, glycoprotein, beta sandwich, oxidoreductase; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} (A:1-23,A:222-350)
Probab=83.20 E-value=1.7 Score=23.06 Aligned_cols=72 Identities=18% Similarity=0.456 Sum_probs=55.5
Q ss_pred EEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHH---CEECCCCC
Q ss_conf 000022222343340642133310011366236530233302322034530745338972178767101---70216888
Q gi|254780919|r 69 VRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEH---DSGVAWQD 145 (198)
Q Consensus 69 v~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~---e~~i~~~D 145 (198)
.-++.|.+. .-+|.+...+|- .+..-|||.|++--|++-..-+.++|.-++.---+. .+|-+|+-
T Consensus 78 fev~EG~l~----------~qig~y~~a~L~--~GDVAFvP~gv~F~yyte~~~tKvlyvssGs~GlDqqLI~ggk~Ws~ 145 (152)
T 1juh_A 78 FQVQEGRVV----------VQIGDYAATELG--SGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSS 145 (152)
T ss_dssp EEEEESCEE----------EEETTSCCEEEC--TTCEEEECTTCCEEEEESSSSEEEEEEEESSSSHHHHHHHHSEEECC
T ss_pred EEEEECEEE----------EEECCCCEEEEC--CCCEEEECCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCC
T ss_conf 999847399----------996576368867--99989989999888684798606999972788415556333555666
Q ss_pred CCCCCCC
Q ss_conf 0117747
Q gi|254780919|r 146 KSIDITW 152 (198)
Q Consensus 146 p~l~i~W 152 (198)
|.+.++|
T Consensus 146 ~tFP~sw 152 (152)
T 1juh_A 146 VSFPADW 152 (152)
T ss_dssp SSCCSCC
T ss_pred CCCCCCC
T ss_conf 8899999
No 90
>>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.06A {Mus musculus} (A:)
Probab=82.00 E-value=1.3 Score=23.76 Aligned_cols=56 Identities=21% Similarity=0.355 Sum_probs=41.5
Q ss_pred CCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEE
Q ss_conf 5440121000022222343340642133310011366236530233302322034530745338
Q gi|254780919|r 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125 (198)
Q Consensus 62 p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i 125 (198)
-++...+.+|+.|+.+ +|+|-. -++|..+.+.+ +..+.||+|.-|-|-+-++..+.
T Consensus 101 ~H~~dEvr~vl~G~g~---f~~r~~---~~~~~~v~~~~--GDli~vP~G~~H~f~~~~~~~v~ 156 (191)
T 1vr3_A 101 LHLDEEIRYILEGSGY---FDVRDK---EDKWIRISXEK--GDXITLPAGIYHRFTLDEKNYVK 156 (191)
T ss_dssp ECSSCEEEEEEEEEEE---EEEECT---TSCEEEEEEET--TEEEEECTTCCEEEEECTTCCEE
T ss_pred ECCCCEEEEEEECCEE---EEEECC---CCCEEEEEEEC--CCEEEECCCCCEEEECCCCCCEE
T ss_conf 5787569999967799---999779---98499999926--98999799983740068988789
No 91
>>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural genomics, joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} (A:)
Probab=81.65 E-value=2.6 Score=21.96 Aligned_cols=62 Identities=16% Similarity=0.104 Sum_probs=41.2
Q ss_pred CCC-EEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEE-CCCCCEEEEEECCCCEEE
Q ss_conf 200-000001555554401210000222223433406421333100113662365302333-023220345307453389
Q gi|254780919|r 49 DCG-TIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYI-PTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 49 ~kg-vlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~I-P~G~aHGf~~L~d~~~i~ 126 (198)
.+| ..-++|.+.. +.-+++|++|++...+-| ..+.|.+ +.++++ |.|..|.|...++.....
T Consensus 54 ~pg~~~~~~h~H~~---~~E~~~Vl~G~~~~~~~~-----------~~~~l~a--GD~i~~~p~~~~H~~~N~g~~~~~~ 117 (162)
T 3l2h_A 54 EPGKESTEYHLHHY---EEEAVYVLSGKGTLTXEN-----------DQYPIAP--GDFVGFPCHAAAHSISNDGTETLVC 117 (162)
T ss_dssp CTTCBSSSSBEESS---CCEEEEEEESCEEEEETT-----------EEEEECT--TCEEEECTTSCCEEEECCSSSCEEE
T ss_pred CCCCCCCCCEECCC---CEEEEEEECCEEEEEECC-----------EEEEECC--CCEEEECCCCEEEEEECCCCCCEEE
T ss_conf 99989773616599---729999992989999999-----------9999559--9589988998088858499888999
No 92
>>2f4p_A Hypothetical protein TM1010; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: UNL; 1.90A {Thermotoga maritima MSB8} (A:)
Probab=81.53 E-value=2.2 Score=22.36 Aligned_cols=63 Identities=16% Similarity=0.120 Sum_probs=45.1
Q ss_pred CCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 5200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r 48 FDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 48 ~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
..+|.-.++|.+.. .-.++|+.|.......|-+ .+.|.+ +..+++|+|..|.+...++....+
T Consensus 55 i~PG~~~~~H~H~~----~e~~~vv~g~~~~~~~~~~----------~~~l~~--Gd~i~~p~g~~H~~~N~g~~~~~~ 117 (147)
T 2f4p_A 55 FEPGARTHWHSHPG----GQILIVTRGKGFYQERGKP----------ARILKK--GDVVEIPPNVVHWHGAAPDEELVH 117 (147)
T ss_dssp ECTTCEECSEECTT----CEEEEEEEEEEEEEETTSC----------CEEEET--TCEEEECTTCCEEEEEBTTBCEEE
T ss_pred ECCCCCCCCCCCCC----CEEEEEEECEEEEEECCCE----------EEEECC--CCEEEECCCCCCCCCCCCCCCEEE
T ss_conf 99997110114998----8899999390999966966----------799739--984886999931487789988899
No 93
>>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} (A:)
Probab=78.74 E-value=2.3 Score=22.29 Aligned_cols=61 Identities=15% Similarity=-0.092 Sum_probs=40.8
Q ss_pred CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r 49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126 (198)
Q Consensus 49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~ 126 (198)
.++..-..|.+ ....++.|.+|+....+ | -..+.+.+ +..++||||..|.+.+.++.....
T Consensus 26 ~~~~~~~~H~H----~~~ei~~v~~G~~~~~i-~----------~~~~~l~~--G~~~~i~p~~~H~~~~~~~~~~~~ 86 (164)
T 2arc_A 26 LDFFIDRPLGM----KGYILNLTIRGQGVVKN-Q----------GREFVCRP--GDILLFPPGEIHHYGRHPEAREWY 86 (164)
T ss_dssp TCSCEEETTCC----SSEEEEEEEEECEEEEE-T----------TEEEEECT--TCEEEECTTCCEEEEECTTSSEEE
T ss_pred CCEEEECCCCC----CCEEEEEEEEEEEEEEE-C----------CEEEEECC--CEEEEECCCCEEEEEECCCCCCEE
T ss_conf 52347078888----99899999971699999-9----------99999679--929999199728988579899879
No 94
>>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A (A:1-28,A:225-434)
Probab=70.18 E-value=5.2 Score=20.21 Aligned_cols=111 Identities=12% Similarity=0.073 Sum_probs=66.1
Q ss_pred CEEEECCCEEEEEECH--HHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCC-----
Q ss_conf 6220379504211088--989867998741344233125200000001555554401210000222223433406-----
Q gi|254780919|r 12 RKFEDSRGWFSQTYSS--KLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIR----- 84 (198)
Q Consensus 12 ~~f~D~RG~f~e~f~~--~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR----- 84 (198)
..+.-.-|.|.|+-.. ..|..+++... - .. ..+|.+..-||...- .++++|+.|+-..=+|...
T Consensus 45 p~y~n~~Gr~~el~~~~~p~L~~l~lsv~--~--~~--l~~gAm~~P~~n~nA---~~i~yV~~G~G~vqiV~p~~~~~~ 115 (238)
T 2ea7_A 45 PIYSNKFGRWYEMTPEKNPQLKDLDVFIS--S--VD--MKEGALLLPHYSSKA---IVIMVINEGEAKIELVGLSDQQQQ 115 (238)
T ss_dssp CSEEETTEEEEEECTTTCHHHHHHTEEEE--E--EE--ECTTEEEEEEEESSC---EEEEEEEESCEEEEEEEEEECCCC
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCEEEE--E--EE--ECCCCEECCCCCCCC---CEEEEEEECCEEEEEECCCCCCCC
T ss_conf 86336875389807332764333550579--9--98--637834067547888---689999827279999768997410
Q ss_pred ---CCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE-ECCCCCC
Q ss_conf ---42133310011366236530233302322034530745338972-1787671
Q gi|254780919|r 85 ---RNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK-VTDFYSV 135 (198)
Q Consensus 85 ---~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~-~~~~y~p 135 (198)
..|+-| +++.-+|+ .++.+.||.|++-.-.+=+. ..+..+ ++..-++
T Consensus 116 ~~~~~~~~~-r~~~~~l~--~G~l~vVP~~~~v~~~A~~~-l~~v~F~tna~~n~ 166 (238)
T 2ea7_A 116 KQQEESLEV-QRYRAELS--EDDVFVIPAAYPVAINATSN-LNFFAFGINAENNR 166 (238)
T ss_dssp TTSCCCEEE-EEEEEEEC--TTCEEEECTTCCEEEEESSS-EEEEEEEETCTTCC
T ss_pred CCCCCCCCE-EEEEEEEC--CCCEEEECCCCCEEEEECCC-CEEEEEEEECCCCC
T ss_conf 123456522-67761776--88789999999345880798-17999995178886
No 95
>>2ox0_A JMJC domain-containing histone demethylation protein 3A; double-stranded beta helix, demethylase, oxygenase, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2pxj_A* (A:)
Probab=67.31 E-value=9.3 Score=18.74 Aligned_cols=40 Identities=10% Similarity=-0.131 Sum_probs=29.3
Q ss_pred HEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 001136623653023330232203453074533897217876
Q gi|254780919|r 92 CWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133 (198)
Q Consensus 92 k~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y 133 (198)
++..+++.+ |..||||+|.+|-..+++++..+........
T Consensus 278 ~~~~~~~~~--Gd~l~iP~gw~H~v~~~~~sisv~~nf~~~~ 317 (381)
T 2ox0_A 278 PFDKVTQEA--GEFMITFPYGYHAGFNHGFNCAESTNFATRR 317 (381)
T ss_dssp CCEEEEECT--TCEEEECTTCEEEEEECSSEEEEEEEECCTT
T ss_pred CEEEECCCC--CCEEEECCCCEEEEECCCCCHHHEEECCCCH
T ss_conf 779834479--9779977871664423764130054206701
No 96
>>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} (A:25-71,A:322-462)
Probab=67.18 E-value=1.2 Score=23.84 Aligned_cols=53 Identities=21% Similarity=0.352 Sum_probs=31.1
Q ss_pred HHHHHHCCCCHHHHHHEEEE-------------EEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHC
Q ss_conf 23433406421333100113-------------662365302333023220345307453389721787671017
Q gi|254780919|r 77 FDIAVDIRRNSPTYGCWVSL-------------EISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHD 138 (198)
Q Consensus 77 ~dvvvDlR~~SpTfgk~~~~-------------~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e 138 (198)
+.++||.+++||||||...- .||-+++ -||+-. .. ...+-+|-+++.++|+.-
T Consensus 20 ~LatVDvdP~S~tYgqVihr~~mp~~gDLitDI~iSlDDr-~LYvs~-W~-------~Gd~rqYDIsDp~~Pkl~ 85 (188)
T 2ece_A 20 FIAVVDVNPKSETYSKIVHKVELPYINDLVTDIDISLDDK-FLYLSL-WG-------IGEVRQYDISNPFKPVLT 85 (188)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCCCCEEECTTSC-EEEEEE-TT-------TTEEEEEECSSTTSCEEE
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCC-EEEEEE-CC-------CCCEEEEECCCCCCCEEE
T ss_conf 4899868999998342889987898788556667503784-899971-24-------795799765788986067
No 97
>>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} (A:)
Probab=66.51 E-value=8.5 Score=18.97 Aligned_cols=108 Identities=15% Similarity=0.045 Sum_probs=60.2
Q ss_pred CCCEEEEEECHHHHHHC-CCC------CC------EEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHC
Q ss_conf 79504211088989867-998------74------134423312520000000155555440121000022222343340
Q gi|254780919|r 17 SRGWFSQTYSSKLLKEL-GLQ------DV------FVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDI 83 (198)
Q Consensus 17 ~RG~f~e~f~~~~~~~~-~~~------~~------~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDl 83 (198)
+-|+|.|+|++...-.. .++ .. ..-+.+=++ ..|-+=-|| ... .+-+++-..|..+.+.+.-
T Consensus 44 EGGyfret~rs~~~v~~~~~~~~~~~~~~~~~R~~~TsIYyLL~-~~~~~S~~H--r~~--sdEiw~~h~G~pl~~~i~~ 118 (203)
T 1xe7_A 44 EGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLT-PDSPIGKFH--KNI--NRIIHILQRGKGQYVLVYP 118 (203)
T ss_dssp TSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEB-TTBCEEEEE--EES--SCEEEEEEEECEEEEEECT
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC-CCCCCCHHE--ECC--CCCEEEEECCCCEEEEEEC
T ss_conf 98667988987672356555545566666777664215899986-799877510--758--7728999069956999806
Q ss_pred CCCHHHHHHEEEEEEECC----CCCEEEECCCCCEEEEEECCC-----CEEEEEECCCCCC
Q ss_conf 642133310011366236----530233302322034530745-----3389721787671
Q gi|254780919|r 84 RRNSPTYGCWVSLEISAN----NGLQIYIPTGFAHGFMTLEMN-----TEVIYKVTDFYSV 135 (198)
Q Consensus 84 R~~SpTfgk~~~~~Ls~~----~~~~l~IP~G~aHGf~~L~d~-----~~i~Y~~~~~y~p 135 (198)
-|++..+.|+.+ ..-++.||+|++-|-..+.++ +.|-..|.=-|+.
T Consensus 119 ------dG~~~~~~LG~d~~~Ge~~Q~vVp~G~w~aa~~~~~~~~g~ysLvsctVaPGFdf 173 (203)
T 1xe7_A 119 ------DGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEVVVPGFDF 173 (203)
T ss_dssp ------TSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEEESSCCCG
T ss_pred ------CCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCCH
T ss_conf ------9986899832685668526887589979986654888877558998465188352
No 98
>>1znp_A Hypothetical protein ATU3615; X-RAY, NESG, ATR55, Q8U9W0, structural genomics, PSI, protein structure initiative; 2.50A {Agrobacterium tumefaciens str} (A:)
Probab=59.10 E-value=13 Score=17.85 Aligned_cols=108 Identities=13% Similarity=0.010 Sum_probs=68.8
Q ss_pred CCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHH-HHHHHCCCCHHHHHHEEE
Q ss_conf 7950421108898986799874134423312520000000155555440121000022222-343340642133310011
Q gi|254780919|r 17 SRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIF-DIAVDIRRNSPTYGCWVS 95 (198)
Q Consensus 17 ~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~-dvvvDlR~~SpTfgk~~~ 95 (198)
+-|+|.|+|+++.-. ...-..-+.+-.+ +|..-++|--+.. +-++.-..|.-+ ..+++- -|++..
T Consensus 21 EGG~f~et~rs~~~~---~R~~~T~Iy~LL~--~~~~s~~Hrv~~s---dEiw~~~~G~pl~l~~i~p------dG~~~~ 86 (154)
T 1znp_A 21 EGGFYHQTFRDKAGG---ERGHSTAIYYLLE--KGVRSHWHRVTDA---VEVWHYYAGAPIALHLSQD------GREVQT 86 (154)
T ss_dssp TSSEEEEEEECSSST---TTCSCEEEEEEEE--SSCCEEEEEETTS---CEEEEEEEESCEEEEEESS------SSCCEE
T ss_pred CCCEEEEEEECCCCC---CCCCEEEEEEECC--CCCCCCEEECCCC---CEEEEECCCCCEEEEEECC------CCCEEE
T ss_conf 983499888789999---8766069999847--9997700121598---7799983897439999527------996589
Q ss_pred EEEECC----CCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHC
Q ss_conf 366236----5302333023220345307453389721787671017
Q gi|254780919|r 96 LEISAN----NGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHD 138 (198)
Q Consensus 96 ~~Ls~~----~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e 138 (198)
+.|+.+ ..-++.||+|++.|-.++++-+.+...|.=-|+.++-
T Consensus 87 ~~LG~d~~~Ge~~q~vVP~G~w~aa~~~~~~sLvsc~VaPGF~f~df 133 (154)
T 1znp_A 87 FTLGPAILEGERPQVIVPANCWQSAESLGDFTLVGCTVSPGFAFSSF 133 (154)
T ss_dssp EEESSCTTTTEESEEEECTTCEEEEEESSSEEEEEEEESSCCCGGGE
T ss_pred EEECCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEEECCCCCCCCC
T ss_conf 98558855587417887799798550889959999676497847778
No 99
>>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} (A:1-152,A:259-440)
Probab=56.81 E-value=14 Score=17.72 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=34.5
Q ss_pred HHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEE--------EECCCCEEEEEECCCCCCHH
Q ss_conf 3406421333100113662365302333023220345--------30745338972178767101
Q gi|254780919|r 81 VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM--------TLEMNTEVIYKVTDFYSVEH 137 (198)
Q Consensus 81 vDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~--------~L~d~~~i~Y~~~~~y~p~~ 137 (198)
...|.-+.-+.++ +.|. .+.++|||+|.-|+|. +-+||++=.|++..+-+.+.
T Consensus 149 ~g~r~~~~~~ln~--v~l~--pGea~~ipag~~HAy~~G~~iEima~SDnviR~gltpK~~Dv~~ 209 (334)
T 1pmi_A 149 CGFKFCGCLLLNH--VGLN--KGEAMFLQAKDPHAYISGDIIECMAASDNVVRAGFTPKFKDVKN 209 (334)
T ss_dssp EEECHHTTTTEEE--EEEC--TTCEEEECTTCCEEEEEEEEEEEEESCCCCEEEESCSSCCCHHH
T ss_pred ECCCCCHHHHHEE--EECC--CCCEEECCCCCCCEECCCCEEEEEECCCCEEEEECCCCCCCHHH
T ss_conf 4688408766026--7446--57568747998548657867998736896899731577668777
No 100
>>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} (A:1-19,A:215-397)
Probab=52.15 E-value=17 Score=17.18 Aligned_cols=110 Identities=13% Similarity=0.108 Sum_probs=72.3
Q ss_pred ECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHH
Q ss_conf 07622037950421108898986799874134423312520000000155555440121000022222343340642133
Q gi|254780919|r 10 KTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT 89 (198)
Q Consensus 10 ~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpT 89 (198)
+-..+..+-|.++|.=- ++ ++ .+++.+- -++|.+-+.||-.. -.|+-.|++|+-..=++..+.+|.+
T Consensus 23 k~p~~sN~~G~l~E~~~----~~--Ld---l~v~~~n-it~gSm~~p~ynsr---At~iavV~~G~G~~Em~cPh~~~~~ 89 (202)
T 2phl_A 23 QDNTIGNEFGNLTERTD----NS--LN---VLISSIE-MEEGALFVPHYYSK---AIVILVVNEGEAHVELVGPKGNKET 89 (202)
T ss_dssp --CEEEETTEEEEEEEE----TT--TT---EEEEEEE-ECTTEEEEEEEESS---CEEEEEEEESEEEEEEEEECC--CC
T ss_pred CCCCEECCCCCEEECCC----CC--CC---CHHEEEE-ECCCCEEEEEECCC---CCEEEEEECCEEEEEEEECCCCCCC
T ss_conf 58843358861886374----45--87---6220434-21584653257488---8689999616178999817997332
Q ss_pred --HHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCC
Q ss_conf --3100113662365302333023220345307453389721787671
Q gi|254780919|r 90 --YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSV 135 (198)
Q Consensus 90 --fgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p 135 (198)
|-+ ..-.|+. +..+.||+|.--...+-++=.+++.-++..-|.
T Consensus 90 rsY~~-~ra~l~~--g~v~VvPaghP~~~~a~snL~iv~F~vnA~~N~ 134 (202)
T 2phl_A 90 LEYES-YRAELSK--DDVFVIPAAYPVAIKATSNVNFTGFGINANNNN 134 (202)
T ss_dssp SCEEE-EEEEEET--TCEEEECTTCCEEEEESSSEEEEEEEESCTTCC
T ss_pred CCCEE-EEEEECC--CCEEEECCCCEEEEEECCCEEEEEEEECCCCCC
T ss_conf 12022-3125859--868999999928898079807999994278871
No 101
>>1o5u_A Novel thermotoga maritima enzyme TM1112; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.83A {Thermotoga maritima} (A:)
Probab=52.04 E-value=13 Score=17.87 Aligned_cols=51 Identities=20% Similarity=0.260 Sum_probs=34.5
Q ss_pred CHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 4012100002222234334064213331001136623653023330232203453074533897
Q gi|254780919|r 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127 (198)
Q Consensus 64 ~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y 127 (198)
.+..++++++|++....=| |+ ...+.+ +.+++||+|.-|.+.+.+.- .-.|
T Consensus 48 ~~dE~~~vleG~~~i~~~d--------G~--~~~~~a--GD~~~~p~G~~~~w~~~~~~-~k~y 98 (101)
T 1o5u_A 48 DTNETCYILEGKVEVTTED--------GK--KYVIEK--GDLVTFPKGLRCRWKVLEPV-RKHY 98 (101)
T ss_dssp SSCEEEEEEEEEEEEEETT--------CC--EEEEET--TCEEEECTTCEEEEEEEEEE-EEEE
T ss_pred CCCEEEEEEEEEEEEEECC--------CC--EEEEEC--CCEEEECCCCEEEEEECCEE-EEEE
T ss_conf 8648999998599999199--------97--899969--98999999999999978419-9999
No 102
>>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis mr-1} (A:)
Probab=48.85 E-value=20 Score=16.87 Aligned_cols=107 Identities=14% Similarity=0.201 Sum_probs=62.0
Q ss_pred CCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH-HHHCCCCHHHHHHEEE
Q ss_conf 795042110889898679987413442331252000000015555544012100002222234-3340642133310011
Q gi|254780919|r 17 SRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI-AVDIRRNSPTYGCWVS 95 (198)
Q Consensus 17 ~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv-vvDlR~~SpTfgk~~~ 95 (198)
+-|+|.|+|++..-..... .-..-+.+-++ +|..=.||- ... +-++.-..|.-+-+ +++- -|+...
T Consensus 28 EGG~fret~rs~~~~~~~R-~~~T~IyyLL~--~~~~S~~Hr--v~s--dEiw~~h~G~pl~l~~i~~------dG~~~~ 94 (170)
T 1yud_A 28 EGGFYRSSYRSETAFDPSR-QLWSSIYFLLR--TGEVSHFHR--LTA--DEXWYFHAGQSLTIYXISP------EGELTT 94 (170)
T ss_dssp TSSEEEEEEECSSBSSSSS-BSCEEEEEEEE--TTCCEEEEE--CSS--CEEEEEEEESCEEEEEECT------TSCEEE
T ss_pred CCCEEEEEEECCCCCCCCC-CCCEEEEEEEC--CCCCCCCEE--ECC--CEEEEEECCCCEEEEEECC------CCCCEE
T ss_conf 9866998885898779988-64468999867--899982269--279--8189996799669999606------897125
Q ss_pred EEEECC----CCCEEEECCCCCEEEE-EECCCCEEEEEECCCCCCH
Q ss_conf 366236----5302333023220345-3074533897217876710
Q gi|254780919|r 96 LEISAN----NGLQIYIPTGFAHGFM-TLEMNTEVIYKVTDFYSVE 136 (198)
Q Consensus 96 ~~Ls~~----~~~~l~IP~G~aHGf~-~L~d~~~i~Y~~~~~y~p~ 136 (198)
..|+++ ..-++.||+|++-|-- +..+-+.+...|.=-|+.+
T Consensus 95 ~~LG~d~~~ge~~q~vVp~G~w~aa~~~~g~~~Lvsc~VaPGF~f~ 140 (170)
T 1yud_A 95 AQLGLDLAAGERPQFLVPKGCIFGSAXNQDGFSLVGCXVSPGFTFD 140 (170)
T ss_dssp EEESSCTTTTEESCEEECTTCEEEEEESSSSEEEEEEEESSCCCGG
T ss_pred EEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCHH
T ss_conf 5650477778615898469977887873999599996765884502
No 103
>>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structure initiative; 1.60A {Pseudomonas putida KT2440} (A:)
Probab=44.35 E-value=19 Score=16.95 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=50.0
Q ss_pred EEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 000001555554401210000222223433406421333100113662365302333023220345307453389721
Q gi|254780919|r 52 TIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129 (198)
Q Consensus 52 vlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 129 (198)
+++-|-.+ |+. +.....+.|..+.|+|-.-.+.|.-.....|...+ ++.+-+-+|+||+...--+...-.|.+
T Consensus 69 ~v~~lERH--p~~-sQ~fiPl~~~~~lvvVA~~~~~pd~~~l~AF~~~~--~qgV~~~~GvWH~~~~~l~~~~~F~vl 141 (175)
T 2bdr_A 69 TVRXLERH--PLG-SQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNG--RQGVNYHRGVWHHPVLTIEKRDDFLVV 141 (175)
T ss_dssp EECEEEEC--TTB-CEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECS--SCEEEECTTCEECSCEESSSEEEEEEE
T ss_pred CEEEEEEC--CCC-CEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECC--CCEEEECCCCEECCCCCCCCCCEEEEE
T ss_conf 13136226--987-35788258995799996775689801339999479--977886899622782246788659999
No 104
>>3bcw_A Uncharacterized protein; NP_887725.1, domain of unknown function with A RMLC-like cupin fold; 1.60A {Bordetella bronchiseptica RB50} (A:)
Probab=42.78 E-value=23 Score=16.50 Aligned_cols=52 Identities=19% Similarity=0.250 Sum_probs=34.7
Q ss_pred CHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 40121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128 (198)
Q Consensus 64 ~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~ 128 (198)
+..-++++++|++..-.-| |+ .+.+.+ +.+++||+|..|.+-++++- .-.|.
T Consensus 67 ~~dE~~~vLeG~~~i~~~d--------G~--~~~~~a--GD~~~iP~G~~~~w~v~e~~-~k~yv 118 (123)
T 3bcw_A 67 GYIEYCHIIEGEARLVDPD--------GT--VHAVKA--GDAFIXPEGYTGRWEVDRHV-KKIYF 118 (123)
T ss_dssp TEEEEEEEEEEEEEEECTT--------CC--EEEEET--TCEEEECTTCCCEEEEEEEE-EEEEE
T ss_pred CCCEEEEEEEEEEEEEECC--------CC--EEEEEC--CCEEEECCCCEEEEEECCEE-EEEEE
T ss_conf 8646999996399999499--------98--999928--99999899998999978329-99999
No 105
>>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.30A {Ruegeria pomeroyi dss-3} (A:)
Probab=36.86 E-value=31 Score=15.77 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=37.2
Q ss_pred CCCEEE-ECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCC--CEEEEEECCCCE
Q ss_conf 200000-0015555544012100002222234334064213331001136623653023330232--203453074533
Q gi|254780919|r 49 DCGTIR-GLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGF--AHGFMTLEMNTE 124 (198)
Q Consensus 49 ~kgvlR-GlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~--aHGf~~L~d~~~ 124 (198)
.+|--. ..|.+.. ..-+++|++|++...+ | + ..+.|.+ +.++++|+|. +|+|...++...
T Consensus 51 ~pG~~~~~~h~h~~---~~E~~~Vl~G~~~~~~-~--------~--~~~~l~~--GD~~~~p~~~~~~H~~~N~g~~~~ 113 (163)
T 3i7d_A 51 EPGAKSSLRHYHXE---QDEFVXVTEGALVLVD-D--------Q--GEHPXVP--GDCAAFPAGDPNGHQFVNRTDAPA 113 (163)
T ss_dssp CTTCBSSSSEEESS---CCEEEEEEESCEEEEE-T--------T--EEEEECT--TCEEEECTTCCCCBEEECCSSSCE
T ss_pred CCCCCCCCCEECCC---CEEEEEEEECCEEEEE-C--------C--EEEECCC--CCEEEEECCCCCCEEEEECCCCCE
T ss_conf 96988787538799---7599999979999998-9--------9--9998469--958999598984678895999989
No 106
>>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} (A:1-27,A:210-361)
Probab=35.51 E-value=32 Score=15.64 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=51.2
Q ss_pred CCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCE
Q ss_conf 98741344233125200000001555554401210000222223433406421333100113662365302333023220
Q gi|254780919|r 35 LQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAH 114 (198)
Q Consensus 35 ~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aH 114 (198)
..++.+..-+-. ..+++|-+|++- ... ..-+++.|+.-..+. .+-||...-.|.. +..=|||.|++|
T Consensus 48 GSFNm~~~~~~l--E~~~~rqlhwhp-nad--ewqyvldgemdltvf------asegkasvsrlqq--gdvgyvpkgygh 114 (179)
T 2vqa_A 48 GSFNMTGALIHL--EPGAMRQLHWHP-NAD--EWQYVLDGEMDLTVF------ASEGKASVSRLQQ--GDVGYVPKGYGH 114 (179)
T ss_dssp TSTTCEEEEEEE--CTTCEEEEEECS-SCC--EEEEEEESCEEEEEE------CSTTCEEEEEECT--TCEEEECTTCEE
T ss_pred CCCCCCEEEEEE--CCCCCCCCCCCC-CCC--EEEEEEECEEEEEEE------CCCCEEEEEEECC--CCEEEECCCCEE
T ss_conf 534652599997--788413886989-988--999999267999998------4376578999449--978998999769
Q ss_pred EEEEECCC--CEEEEEECCCCC
Q ss_conf 34530745--338972178767
Q gi|254780919|r 115 GFMTLEMN--TEVIYKVTDFYS 134 (198)
Q Consensus 115 Gf~~L~d~--~~i~Y~~~~~y~ 134 (198)
+.-.-+.. -++..+-++.|.
T Consensus 115 airnssqkpldivvvfndgdyq 136 (179)
T 2vqa_A 115 AIRNSSQKPLDIVVVFNDGDYQ 136 (179)
T ss_dssp EEECCSSSCEEEEEEESSSSCC
T ss_pred EEEECCCCCEEEEEEECCCCCH
T ss_conf 9995799988999998999820
No 107
>>2wfp_A Mannose-6-phosphate isomerase; zinc, cytoplasm, APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A* (A:9-152,A:232-301)
Probab=31.86 E-value=37 Score=15.29 Aligned_cols=35 Identities=11% Similarity=0.320 Sum_probs=22.5
Q ss_pred EEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 13662365302333023220345307453389721787
Q gi|254780919|r 95 SLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132 (198)
Q Consensus 95 ~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~ 132 (198)
.+.|.+ +.++|+|+|.-|+|++= +...++-..+|.
T Consensus 154 ~~~l~p--g~~~~~~~~~~hayl~g-~~~e~ma~sdnv 188 (214)
T 2wfp_A 154 VVKLNP--GEAMFLFAETPHAYLQG-VALEVMANSDNV 188 (214)
T ss_dssp EEEECT--TCEEEECTTCCEEEEEE-EEEEEECSSCBC
T ss_pred EEECCC--CCEEECCCCCCCEECCC-CEEEEECCCCCE
T ss_conf 997278--98897179985183368-579986168967
No 108
>>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices, merohedral/ hemihedral twinning; 1.70A {Canavalia ensiformis} (X:)
Probab=30.43 E-value=22 Score=16.63 Aligned_cols=63 Identities=13% Similarity=0.130 Sum_probs=37.9
Q ss_pred EEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHC
Q ss_conf 220379504211088989867-99874134423312520000000155555440121000022222343340
Q gi|254780919|r 13 KFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDI 83 (198)
Q Consensus 13 ~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDl 83 (198)
.+.-.-|.+.+.-. +.|..+ ++....... . ..+|-+|..|++-.- +.+++|++|+...-+||.
T Consensus 12 ~~~~~~G~~~~~~~-~~fP~L~~l~is~~~~--~--l~~g~m~~PH~hp~A---~ei~~v~~G~~~~~~v~~ 75 (79)
T 1dgw_X 12 IYSNNYGKLYEITP-EKNSQLRDLDILLNCL--Q--MNEGALFVPHYNSRA---TVILVANEGRAEVELVGL 75 (79)
T ss_dssp SEECSSEEEEEECT-TTCHHHHTTTEEEEEE--E--ECTTCEEEEEEESSC---EEEEEEEESCEEEEEEEE
T ss_pred CCCCCCCEEEEECH-HHCCCCCCCCEEEEEE--E--ECCCCEEEEEECCCC---CEEEEEEECEEEEEEEEC
T ss_conf 62879976999687-8897733352899999--8--469958656547998---699999927299999834
Done!