HHsearch results for GI: 254780919 and protein with PDBid: 1nxm_A
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=100.00 E-value=0 Score=365.27 Aligned_cols=172 Identities=32% Similarity=0.583 Sum_probs=152.5
Q ss_pred CCCCEEEEECCEEEECCCEEEEEECHHHHHHCCCCCCE-----EEEEEEECCCCCEEEECCCCCCCCCHHHHEEEC-HHH
Q ss_conf 65753997076220379504211088989867998741-----344233125200000001555554401210000-222
Q gi|254780919|r 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF-----VQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCI-AGR 75 (198)
Q Consensus 2 ~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~-----~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci-~G~ 75 (198)
+|+||++++++.|.|+||+|.|+|+.+++.+.+++..+ +|+|+|.| +|||||||||| +|+|+++|+ .|+
T Consensus 17 ~I~Gv~ii~~~~~~D~RG~F~e~f~~~~~~~~~~~~~~~~~~~~Q~n~S~S-~kgvlRGlH~q----~~~k~v~~~~~G~ 91 (197)
T 1nxm_A 17 AIPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLHAE----PWDKYISVADGGK 91 (197)
T ss_dssp TSTTCEEEECCEEEETTEEEEEEEEHHHHTTTTCCGGGGTTCCCEEEEEEE-ETTBEEEEEEC----SSCEEEEECSSCC
T ss_pred CCCCCEEEECCCEECCCCCEEEEECHHHHHHHCCCCCCCCCCEEEEEEEEC-CCCEEEEEEEC----CCCEEEEEEECCC
T ss_conf 888758997973162990898861457898718973212022154248761-48889999607----7606899871471
Q ss_pred HHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHC---EECCCCCCCCCCCC
Q ss_conf 223433406421333100113662365302333023220345307453389721787671017---02168880117747
Q gi|254780919|r 76 IFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHD---SGVAWQDKSIDITW 152 (198)
Q Consensus 76 I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e---~~i~~~Dp~l~i~W 152 (198)
|++|+||+|+ |||||+|..++|++ +++||||+||||||+||+|+|+++|++|++|+|+.+ .||+|+||.|+|+|
T Consensus 92 i~dvvvD~R~-S~t~gk~~~~~l~~--~~~l~IP~G~aHGf~~L~d~~~i~Y~~s~~y~~~~~~~~~~i~~~Dp~l~i~W 168 (197)
T 1nxm_A 92 VLGTWVDLRE-GETFGNTYQTVIDA--SKSIFVPRGVANGFQVLSDFVAYSYLVNDYWALELKPKYAFVNYADPSLDIKW 168 (197)
T ss_dssp EEEEEEECBS-STTTTCEEEEEECT--TEEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGGGGCEECCTTCTTSSCCC
T ss_pred EEEEEEEECC-CCCCCCEEEEEECC--CCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 4889998516-65456266788326--84589369860688862500177788367748333687235728994238899
Q ss_pred CCCCCCCCEECHHHHCCCCHHHCCCCCEECCC
Q ss_conf 88876763016788459987781855123566
Q gi|254780919|r 153 PLLDTILPSVSEKDQNLPFLNQIDSPFEYDGL 184 (198)
Q Consensus 153 p~~~~~~piiS~kD~~~p~l~d~~~~f~~~~~ 184 (198)
|..+ .||||+||+++|+|+|++ ++.++.|
T Consensus 169 p~~~--~~ilS~kD~~~p~l~d~~-~~~~~~~ 197 (197)
T 1nxm_A 169 ENLE--EAEVSEADENHPFLKDVK-PLRKEDL 197 (197)
T ss_dssp SCST--TCBCCHHHHTSCCGGGCC-CBCGGGC
T ss_pred CCCC--CCEECHHHCCCCCHHHCC-CCCCCCC
T ss_conf 9999--788878893899968875-7674669