HHsearch results for GI: 254780919 and protein with PDBid: 2ixk_A
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=100.00 E-value=0 Score=403.56 Aligned_cols=172 Identities=46% Similarity=0.825 Sum_probs=164.6
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf 965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI 79 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv 79 (198)
|+|+||++++++.|.|+||+|.|+|+.+++.++ +.+..|+|+|+|.| +|||+||||||.+ .+|+|||+|++|+|+||
T Consensus 9 ~~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~~q~~~s~s-~kgvlRG~H~q~~-~~q~Klv~~i~G~i~dv 86 (184)
T 2ixk_A 9 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRS-ARGVLRGLHYQIR-QAQGKLVRATLGEVFDV 86 (184)
T ss_dssp CSSTTSEEEECCEEEETTEEEEEEEEHHHHHHHHSSCCCCCEEEEEEE-ETTBEEEEEEESS-SCCCEEEEEEESEEEEE
T ss_pred CCCCCEEEEECCCEECCCEEEEEEEEHHHHHHHCCCCCCEEEEEEEEC-CCCCEEEEEECCC-CCCCEEEEEEEEEEEEE
T ss_conf 779977999797126599729999600378985199976678999984-7894799985699-88428999986069999
Q ss_pred HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r 80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159 (198)
Q Consensus 80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~ 159 (198)
+||+|++|||||+|.+++|+++++++||||+||||||+||+|+|+++|++|++|+|++|.||+|+||.|+|+||+.++
T Consensus 87 ~vDlR~~S~T~g~~~~~~L~~~~~~~l~IP~G~aHGf~~L~d~t~v~Y~~s~~y~p~~e~~i~~~Dp~l~i~Wp~~~~-- 164 (184)
T 2ixk_A 87 AVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDA-- 164 (184)
T ss_dssp EEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGEEEBCTTCTTTCCCCCCSSC--
T ss_pred EEECCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCHHCCCCCCCCC--
T ss_conf 974789969888388789367777469828994689998279739999679864855544676898221888999997--
Q ss_pred CEECHHHHCCCCHHHCC
Q ss_conf 30167884599877818
Q gi|254780919|r 160 PSVSEKDQNLPFLNQID 176 (198)
Q Consensus 160 piiS~kD~~~p~l~d~~ 176 (198)
||||+||+++|+|+|++
T Consensus 165 ~iiS~kD~~~p~l~d~~ 181 (184)
T 2ixk_A 165 PLLSEKDRQGKAFADAD 181 (184)
T ss_dssp CBCCHHHHTCBCGGGSC
T ss_pred CEECHHHCCCCCHHHCC
T ss_conf 45468896998946555