HHSEARCH alignment of GI: 254780919 and SCOP domain: d2et1a1

Alignment

Probab=93.61  E-value=0.054  Score=29.37  Aligned_cols=73  Identities=14%  Similarity=0.113  Sum_probs=52.7

Q ss_pred             CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf             20000000155555440121000022222343340642133310011366236530233302322034530745338972
Q gi|254780919|r   49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK  128 (198)
Q Consensus        49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~  128 (198)
                      .+|-++-.|++-.   -..+++|++|+...-+++-.   .+=++.+...|.+  +..++||+|+.|..+...++..+.+.
T Consensus        80 ~pgg~~~PH~Hp~---A~Ei~yV~~G~~~v~~v~~~---~~~~~~~~~~l~~--GDv~vvP~G~~H~~~N~g~~~a~~i~  151 (201)
T d2et1a1          80 APGGTNPPHIHPR---ATEIGMVMKGELLVGILGSL---DSGNKLYSRVVRA--GETFVIPRGLMHFQFNVGKTEAYMVV  151 (201)
T ss_dssp             CTTCEEEEEECTT---CCEEEEEEESCEEEEEECCG---GGTTCEEEEEECT--TCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred             CCCCCCCCCCCCC---CCEEEEEECCEEEEEEEECC---CCCCEEEEEEECC--CCEEEECCCCEEEEEECCCCCEEEEE
T ss_conf             8998847836599---99999998362899998536---8886368888559--97899889973899976999789999


Q ss_pred             E
Q ss_conf             1
Q gi|254780919|r  129 V  129 (198)
Q Consensus       129 ~  129 (198)
                      .
T Consensus       152 ~  152 (201)
T d2et1a1         152 S  152 (201)
T ss_dssp             E
T ss_pred             E
T ss_conf             9

SCOP domain information

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Germin/Seed storage 7S protein
domain: Germin
species: Barley (Hordeum vulgare) [TaxId: 4513]