BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780919|ref|YP_003065332.1| dTDP-4-dehydrorhamnose
3,5-epimerase [Candidatus Liberibacter asiaticus str. psy62]
(198 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780919|ref|YP_003065332.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040596|gb|ACT57392.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Liberibacter
asiaticus str. psy62]
Length = 198
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 198/198 (100%), Positives = 198/198 (100%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR
Sbjct: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE
Sbjct: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE
Sbjct: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
Query: 181 YDGLPLLSLNMERDLLCV 198
YDGLPLLSLNMERDLLCV
Sbjct: 181 YDGLPLLSLNMERDLLCV 198
>gi|218887778|ref|YP_002437099.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758732|gb|ACL09631.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 196
Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats.
Identities = 87/188 (46%), Positives = 116/188 (61%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + L+ R F D RG+F +TY L LG+ FVQDNH+ S G +RGLHFQ PP
Sbjct: 8 IPGLLRLEPRVFRDERGFFLETYRRDLFAALGVPAGFVQDNHARSEQPGVLRGLHFQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLV G +FD+AVD+R SP YG W E+S N ++++P GFAHG+MTLE
Sbjct: 68 ATQAKLVWVTRGSVFDVAVDLRVGSPAYGKWYGCELSERNFARLFVPRGFAHGYMTLEPG 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+E YKV +YS E D+G+AW D + ITWP + LP +S+KD+ LP L + SPF ++
Sbjct: 128 SEFQYKVDAYYSPERDAGIAWDDPDLGITWPDIAPALPILSDKDRRLPRLRDLQSPFTFE 187
Query: 183 GLPLLSLN 190
P +
Sbjct: 188 PAPPAKAD 195
>gi|229106721|ref|ZP_04236952.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-28]
gi|228676719|gb|EEL31334.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-28]
Length = 185
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 85/180 (47%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ ++ +LGL F+QDN S S GT+RGLHFQ
Sbjct: 7 KIPDVVILEPKVFGDHRGYFMESYNKEIFNKLGLDYEFIQDNQSLSVPAGTLRGLHFQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ K+VRCI G I+D+AVDIR+ SPTYG W+ + +S +N Q+ +P GFAHGF TL
Sbjct: 67 PKAQTKIVRCITGAIYDVAVDIRKGSPTYGQWIGVILSEHNKRQLVVPKGFAHGFCTLVP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N+ V YKV ++YS HD+G+ W D ++ I WP+ + P +SEKD P L + + F Y
Sbjct: 127 NSTVAYKVDEYYSPNHDAGILWNDPALGIDWPVSE---PILSEKDTKHPLLEEANINFVY 183
>gi|33637042|gb|AAQ23680.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacillus
stearothermophilus]
Length = 187
Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats.
Identities = 85/180 (47%), Positives = 114/180 (63%), Gaps = 3/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
V +++ + F D RG+F ++Y+ KL E GL F+QDNHS S GTIRGLH+Q P
Sbjct: 8 FPGVWLIEPKVFGDHRGFFMESYNKKLFAEYGLDFDFIQDNHSLSRQAGTIRGLHYQLNP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR G I+D+ VDIR+ SPT+G W +SA+N Q+ +P GFAHGF TL N
Sbjct: 68 KAQTKLVRVTRGAIYDVVVDIRKGSPTFGKWQGFILSADNKRQLLVPKGFAHGFCTLVEN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TEV YKV ++YS EHD G+ W D ++ I WP + P +S+KD P L + FE++
Sbjct: 128 TEVQYKVDEYYSPEHDRGILWNDPALGIDWPTAN---PILSDKDTKHPLLADAEINFEWE 184
>gi|229175942|ref|ZP_04303439.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus MM3]
gi|228607536|gb|EEK64861.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus MM3]
Length = 185
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ F D RG+F ++Y+ +LGL+ F+QDN S S GT+RGLHFQ
Sbjct: 7 KIPDVLILEPNVFGDHRGYFMESYNKDAFDKLGLKYEFIQDNQSLSVPVGTLRGLHFQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ K+VRCI G I+D+AVDIR+ SPTYG W+ + +S +N Q+ +P GFAHGF TL
Sbjct: 67 PKAQTKVVRCITGAIYDVAVDIRKGSPTYGQWIGVILSEHNKRQLVVPKGFAHGFCTLVP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N+ V YKV ++YS EHDSG+ W D ++ I WP+ + P +S+KD P L + + F Y
Sbjct: 127 NSTVAYKVDEYYSPEHDSGILWNDPALGIDWPVSN---PILSDKDNKHPMLEEANINFVY 183
Query: 182 D 182
+
Sbjct: 184 E 184
>gi|222148466|ref|YP_002549423.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium vitis S4]
gi|221735454|gb|ACM36417.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium vitis S4]
Length = 187
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/181 (45%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V ++ ++F D+RG+F +T+ + L + FVQDN SFS + GT+RGLHFQ
Sbjct: 7 KLSGVFLITPKRFGDARGYFMETFRASLFESEVGPFTFVQDNKSFSAEVGTVRGLHFQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLV C AG + D+AVDIR+ SPTYG V E++A NG Q+++P GFAHGF TL+
Sbjct: 67 PRAQGKLVSCAAGALLDVAVDIRQGSPTYGQMVKAELTAENGCQLWVPPGFAHGFCTLQP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
NT + YKVTD+YS +HD G+ W D ++ I WP+ + +S+KD+ P L+++++ F Y
Sbjct: 127 NTVISYKVTDYYSPDHDRGLLWNDPALAIDWPVTEDNA-ILSDKDKKQPKLSELETNFVY 185
Query: 182 D 182
Sbjct: 186 Q 186
>gi|84515472|ref|ZP_01002834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Loktanella vestfoldensis
SKA53]
gi|84510755|gb|EAQ07210.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Loktanella vestfoldensis
SKA53]
Length = 200
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 92/182 (50%), Positives = 121/182 (66%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL +F D+RG+FS++++ K L G+ FVQDNHS S GTIRGLHFQ P
Sbjct: 19 KLAGVLILSPARFGDARGFFSESWNRKTLAAQGITLDFVQDNHSLSAQIGTIRGLHFQSP 78
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVRC G +FD+AVDIRR+SPTYG W+ E+S NG Q+ IP GF HGF+T
Sbjct: 79 PHAQAKLVRCGRGCLFDVAVDIRRDSPTYGQWLGEELSDQNGRQLLIPAGFLHGFITRAP 138
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+TE+IYK TD+Y+ D V + D I I W L + P +S+KD P L +D+PF +
Sbjct: 139 DTEIIYKCTDYYAPACDGAVRFDDPDIGIDWGLPAGVAPILSDKDAAAPLLRDLDTPFVF 198
Query: 182 DG 183
+G
Sbjct: 199 EG 200
>gi|222099006|ref|YP_002533574.1| Putative dTDP-6-deoxy-D-glucose-3,5-epimerase [Thermotoga
neapolitana DSM 4359]
gi|221571396|gb|ACM22208.1| Putative dTDP-6-deoxy-D-glucose-3,5-epimerase [Thermotoga
neapolitana DSM 4359]
Length = 188
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 93/182 (51%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ R FED RGWF ++YS ++ KELG+ VFVQDNHS+S GT+RG+HFQ
Sbjct: 7 DLPGVLIIEPRVFEDERGWFMESYSYRVFKELGIDAVFVQDNHSYSKRKGTLRGIHFQNN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLVRC G+I D+AVD+R+ SPTY W+ +E+S N ++IP GF H F+TL
Sbjct: 67 PVAQAKLVRCTRGKILDVAVDLRKGSPTYKKWIMVELSEENKRMLFIPKGFGHAFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ EV YKV +YS EHD + W D I I WP+ + P +SEKD+N PFL D F Y
Sbjct: 127 DVEVQYKVDQYYSKEHDRSIRWNDPDIGIDWPIEE---PILSEKDRNAPFLKDSDCNFVY 183
Query: 182 DG 183
G
Sbjct: 184 GG 185
>gi|222148114|ref|YP_002549071.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium vitis S4]
gi|221735102|gb|ACM36065.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium vitis S4]
Length = 187
Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 122/180 (67%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V ++ ++F D+RG+F +T+ + L + FVQDN SFS + GT+RGLHFQ
Sbjct: 7 KLSGVFLITPKRFGDARGYFMETFRASLFESEVGSFTFVQDNKSFSAEVGTVRGLHFQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLV C AG + D+AVDIR+ SPTYG V E++A NG Q+++P GFAHGF TL+
Sbjct: 67 PRAQGKLVSCAAGALLDVAVDIRQGSPTYGQMVKAELTAENGCQLWVPPGFAHGFCTLQP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
NT + YKVTD+YS +HD G+ W D ++ I WP+ + +SEKD+ P L+++++ F Y
Sbjct: 127 NTVISYKVTDYYSPDHDRGLLWNDPALAIDWPVTEDNA-ILSEKDKKQPKLSELETNFVY 185
>gi|254500091|ref|ZP_05112243.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Labrenzia alexandrii DFL-11]
gi|222441389|gb|EEE48067.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Labrenzia alexandrii DFL-11]
Length = 192
Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats.
Identities = 101/187 (54%), Positives = 135/187 (72%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V ++ R+F D RGWF+++Y+ + L+ LG+ FVQDNHS S GT+RGLHFQ PP+AQ
Sbjct: 5 VTLIHPRRFGDDRGWFTESYNKQKLEPLGITCDFVQDNHSLSVPTGTLRGLHFQTPPFAQ 64
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
KLVRCI G++FD+AVDIR+ SPTYG WV +E+SA NG Q+ +P G+AHGF+TLE NTEV
Sbjct: 65 DKLVRCIRGKVFDVAVDIRKGSPTYGKWVGVELSAENGDQLLVPAGYAHGFVTLEDNTEV 124
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLP 185
YKV+++YS ++D+G+ W D I I WPL P +S KD P L DSPF+YDG P
Sbjct: 125 TYKVSNYYSPQNDAGLMWDDADIGIDWPLAAGAEPILSGKDTQHPGLADFDSPFDYDGTP 184
Query: 186 LLSLNME 192
+ + +E
Sbjct: 185 MTLVEIE 191
>gi|329929651|ref|ZP_08283348.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. HGF5]
gi|328935977|gb|EGG32432.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. HGF5]
Length = 182
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 79/180 (43%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++N I++ + DSRG+F ++Y+ L K+ G+ F+QDNHS S + G +RGLH+Q
Sbjct: 6 LSLNGAAIIEPKVHGDSRGFFMESYNESLFKQNGITYNFIQDNHSLSAEPGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R + G I+D+ VDIR++S T+G W + +S +N Q+ +P GFAHGF TL
Sbjct: 66 HPKAQTKLIRVLTGAIYDVIVDIRKSSSTFGQWYGVILSEHNHRQLLVPKGFAHGFCTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT+V+YKV ++YS E+D G+ W D ++ I WP T P +S+KDQ P L + FE
Sbjct: 126 PNTQVLYKVDEYYSPENDRGILWNDPALGIDWP---TSSPILSDKDQRHPLLKDAEMNFE 182
>gi|255263144|ref|ZP_05342486.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thalassiobium sp. R2A62]
gi|255105479|gb|EET48153.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thalassiobium sp. R2A62]
Length = 190
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 115/182 (63%), Gaps = 1/182 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL ++ D RG+FS+ ++S+ E G++ +VQDNHSF+ + G IRG+H QRP
Sbjct: 7 KLPGVLILTPKRHGDDRGFFSECWNSRTYAENGIEINYVQDNHSFNNEVGVIRGMHAQRP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q KLVRC G +FD+ VD+R SPTYG W+ E+S NG Q+ +P G HGFMTL
Sbjct: 67 PHPQIKLVRCGHGLLFDVVVDVRAGSPTYGQWIGCELSFENGRQLLVPAGCLHGFMTLLP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TE+IYK +D+Y+ E + + + D I I WPL P +S+KD+ P L SPF Y
Sbjct: 127 GTEIIYKCSDYYAPETECSLRFDDPDIGIKWPL-GGGTPILSDKDKAAPLLKDFKSPFTY 185
Query: 182 DG 183
G
Sbjct: 186 PG 187
>gi|328544172|ref|YP_004304281.1| glucose-1-phosphate thymidylyltransferase [polymorphum gilvum
SL003B-26A1]
gi|326413915|gb|ADZ70978.1| Glucose-1-phosphate thymidylyltransferase [Polymorphum gilvum
SL003B-26A1]
Length = 187
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/180 (47%), Positives = 125/180 (69%), Gaps = 1/180 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ +KF D RG+FS+TY+++ + G+ FVQDNHS+S + GT+RGLH+Q
Sbjct: 9 LAIPDVLVIEPKKFGDHRGFFSETYNARAFADAGIDLRFVQDNHSYSAEPGTLRGLHYQG 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR + GRI D+AVD+RR+SPT+G WVS EISA QI +P GFAH +TLE
Sbjct: 69 APHAQDKLVRVLRGRILDVAVDLRRSSPTFGKWVSAEISAEAWNQILVPAGFAHAILTLE 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TE++YKV+++Y+ HD G+ W D + I WP+ + + +S+KD PFL + F+
Sbjct: 129 PHTELLYKVSNYYAPSHDFGIRWNDPELAIDWPISEDKV-ILSDKDAKQPFLKDVADLFD 187
>gi|253575947|ref|ZP_04853281.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251844741|gb|EES72755.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 182
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + V +L+ D RG+F ++Y+ +LK+LG+ FVQDN S S + G +RGLH+Q
Sbjct: 6 LKLEGVFLLEPVVHGDHRGFFMESYNEAVLKQLGINYHFVQDNQSLSSEVGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQAKLVR + G I+D+ +DIRR+SPT+G W+ + +S N Q+ +P GFAHGF TLE
Sbjct: 66 NPKAQAKLVRVLTGAIYDVVLDIRRSSPTFGQWIGVTLSEANKRQLLVPKGFAHGFCTLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT+V YKV ++YS EHD G+ W D ++ I WP+ + P +S+KD+ P + + F+
Sbjct: 126 PNTQVFYKVDEYYSPEHDRGILWNDPALKINWPVSE---PLLSDKDRRHPTFAEAEMNFD 182
>gi|251798955|ref|YP_003013686.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. JDR-2]
gi|247546581|gb|ACT03600.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. JDR-2]
Length = 182
Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 83/181 (45%), Positives = 115/181 (63%), Gaps = 3/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++L+ + D RG+F+++Y+ K +E G+ FVQDNHS S + G +RG+H+Q P
Sbjct: 5 LPGVKLLEPPVYGDHRGFFTESYNEKTARENGILHAFVQDNHSLSVEAGVLRGMHYQLQP 64
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR AG I+D+ VDIRR SPT+G W +SA N Q+ +P GFAHGF TL +
Sbjct: 65 KAQTKLVRVTAGAIYDVVVDIRRGSPTFGQWQGFILSAANKRQLLVPQGFAHGFCTLVPS 124
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
EV YKV Y+ EHD G+AW D ++ I WP+ P +S+KD P L Q + F Y+
Sbjct: 125 CEVQYKVDALYAAEHDRGIAWNDPALGIDWPVTK---PILSDKDAKHPVLAQAEINFVYE 181
Query: 183 G 183
G
Sbjct: 182 G 182
>gi|170288107|ref|YP_001738345.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermotoga sp. RQ2]
gi|33413323|emb|CAD67948.1| putative dTDP-6-deoxy-D-glucose-3,5-epimerase [Thermotoga sp. RQ2]
gi|170175610|gb|ACB08662.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermotoga sp. RQ2]
Length = 188
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 94/180 (52%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ R FED RGWF ++YS ++ KELG+ VFVQDNHS+S GT+RG+HFQ
Sbjct: 7 ELPEVLIIEPRVFEDERGWFMESYSYRVFKELGIDVVFVQDNHSYSKKKGTLRGIHFQND 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ+KLVRC GRI D+AVD+R+ SPTY W+ LE+S N ++IP GF H F+TL
Sbjct: 67 PMAQSKLVRCTRGRILDVAVDLRKGSPTYKKWIMLELSEENKRMLFIPRGFGHAFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ EV YKV +YS EHD + W D I I WP+ D P +SEKD+N PFL D F Y
Sbjct: 127 DVEVQYKVDQYYSKEHDRSIRWNDPDIGIDWPIKD---PILSEKDRNAPFLKDSDCNFIY 183
>gi|16803122|ref|NP_464607.1| hypothetical protein lmo1082 [Listeria monocytogenes EGD-e]
gi|47094940|ref|ZP_00232553.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes str.
1/2a F6854]
gi|224500276|ref|ZP_03668625.1| hypothetical protein LmonF1_11619 [Listeria monocytogenes Finland
1988]
gi|224502604|ref|ZP_03670911.1| hypothetical protein LmonFR_08794 [Listeria monocytogenes FSL
R2-561]
gi|254823648|ref|ZP_05228649.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
J1-194]
gi|254828460|ref|ZP_05233147.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
N3-165]
gi|254830148|ref|ZP_05234803.1| hypothetical protein Lmon1_02265 [Listeria monocytogenes 10403S]
gi|254898744|ref|ZP_05258668.1| hypothetical protein LmonJ_02975 [Listeria monocytogenes J0161]
gi|254911767|ref|ZP_05261779.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes J2818]
gi|254936093|ref|ZP_05267790.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes F6900]
gi|255521991|ref|ZP_05389228.1| hypothetical protein LmonocFSL_12347 [Listeria monocytogenes FSL
J1-175]
gi|284801414|ref|YP_003413279.1| hypothetical protein LM5578_1165 [Listeria monocytogenes 08-5578]
gi|284994556|ref|YP_003416324.1| hypothetical protein LM5923_1119 [Listeria monocytogenes 08-5923]
gi|16410484|emb|CAC99160.1| lmo1082 [Listeria monocytogenes EGD-e]
gi|47016558|gb|EAL07478.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes str.
1/2a F6854]
gi|258600856|gb|EEW14181.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
N3-165]
gi|258608683|gb|EEW21291.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes F6900]
gi|284056976|gb|ADB67917.1| hypothetical protein LM5578_1165 [Listeria monocytogenes 08-5578]
gi|284060023|gb|ADB70962.1| hypothetical protein LM5923_1119 [Listeria monocytogenes 08-5923]
gi|293589719|gb|EFF98053.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes J2818]
gi|293592871|gb|EFG00632.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
J1-194]
Length = 186
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K E G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHEAGIDMKFIQDNHSLSVEAGVLRGMHYQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+R G I+D+ VD+R+ SPTYG W +S N Q+ +P GFAHGF T+
Sbjct: 67 PKAQTKLIRVATGAIYDVVVDMRKGSPTYGEWEGYILSEANKHQLLVPQGFAHGFCTITE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N V+YKV YS E+D+G+A+ D ++ITWP +S+KD P L ++ F +
Sbjct: 127 NVNVLYKVDQLYSPENDAGIAYDDPDLNITWPTDK---LILSDKDTKHPRLKDAENNFVW 183
Query: 182 D 182
+
Sbjct: 184 E 184
>gi|315649766|ref|ZP_07902849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus vortex V453]
gi|315274740|gb|EFU38121.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus vortex V453]
Length = 182
Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++N +++ + D RG+F ++Y+ L K+ G+ F+QDN S S + G +RGLH+Q
Sbjct: 6 LSLNDALLIEPKVHGDHRGFFMESYNDSLFKQHGITYNFIQDNQSLSAEAGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R + G I+D+ VDIR++SPT+G WV + +S +N Q+ +P GFAHGF TL
Sbjct: 66 NPKAQTKLIRVLTGAIYDVIVDIRKSSPTFGKWVGVILSEHNHRQLLVPKGFAHGFCTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT+V+YKV ++YS E+D G+ W+D ++ I WP + P +S+KDQ P L + F+
Sbjct: 126 PNTQVLYKVDEYYSPENDRGILWKDPALGIDWPTSN---PILSDKDQQHPLLKDAEMNFD 182
>gi|169342322|ref|ZP_02863393.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens C
str. JGS1495]
gi|169299547|gb|EDS81610.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens C
str. JGS1495]
Length = 189
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 2/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +TYS K +E GL FVQDN S S G +RGLHFQ
Sbjct: 10 KIKDLYIIEPKVFGDERGYFMETYSQKAFEEAGLTMKFVQDNESKSKK-GVLRGLHFQ-T 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G ++D+AVD+R+ SPT+G W + +SA N Q Y+P GFAHGF+ L
Sbjct: 68 KHTQGKLVRVTQGEVWDVAVDLRKGSPTFGQWEGVHLSAENKRQFYVPEGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK TDFY+ E+DSG+ W DK +++ WPL +SEKD+ L ++D PF Y
Sbjct: 128 EAVFNYKCTDFYAPEYDSGLLWNDKDVNVEWPLEGIEEIILSEKDKKQKTLKELDIPFVY 187
Query: 182 DG 183
+G
Sbjct: 188 EG 189
>gi|315640669|ref|ZP_07895773.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus italicus DSM
15952]
gi|315483565|gb|EFU74057.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus italicus DSM
15952]
Length = 193
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 79/182 (43%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS K KE G+ F+QDNHS S + G +RGLHFQ+
Sbjct: 10 KLTDVKIIEPVVFGDHRGFFTESYSDKDFKEAGIDFDFIQDNHSLSTEPGVLRGLHFQKG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +SA+N Q+ +P G+AHGF+TL
Sbjct: 70 QAAQTKLIRVVTGAVLDVIVDIRKGSPTYGEWEGYILSASNHRQLLVPKGYAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ E D G+A+ D + ITWP+ D +SEKD++ P L + ++PF
Sbjct: 130 NVNFLYKCDNYYNAEADGGIAFDDPELAITWPI-DQSKAILSEKDKHHPTLKEFEAENPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|254853034|ref|ZP_05242382.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
R2-503]
gi|300765929|ref|ZP_07075902.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
N1-017]
gi|258606382|gb|EEW18990.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
R2-503]
gi|300513391|gb|EFK40465.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria monocytogenes FSL
N1-017]
Length = 186
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K E+G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHEVGIDMKFIQDNHSLSVEAGVLRGMHYQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+R G I+D+ VD+R+ SPTYG W +S N Q+ +P GFAHGF T+
Sbjct: 67 PKAQTKLIRVATGAIYDVVVDMRKGSPTYGEWEGYILSEANKHQLLVPQGFAHGFCTITE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N V+YKV YS E+D+G+A+ D ++ITWP +S+KD P L ++ F +
Sbjct: 127 NVNVLYKVDQLYSPENDAGIAYDDPDLNITWPTDK---LILSDKDTKHPRLKDAENNFVW 183
Query: 182 D 182
+
Sbjct: 184 E 184
>gi|295400933|ref|ZP_06810908.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976935|gb|EFG52538.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacillus
thermoglucosidasius C56-YS93]
Length = 183
Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+++ + F D RG+F ++Y+ K+ KELG FVQDNHS S + GT+RGLH+Q P
Sbjct: 8 FKDAFLIEPKVFSDHRGFFMESYNDKVFKELGFNYEFVQDNHSLSVEVGTLRGLHYQLEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ KLVR I G ++D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF T+ N
Sbjct: 68 YAQTKLVRVIRGAVYDVIVDIRKGSPTYGKWQGFILSEWNKRQLLVPKGFAHGFCTIVPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TEV+YKV ++YS EHD G+ W D ++I WP T P +SEKD P L + ++ F Y
Sbjct: 128 TEVLYKVDNYYSPEHDRGICWNDPDLNIDWP---TNSPILSEKDSKHPRLVEAENNFTY 183
>gi|83955938|ref|ZP_00964449.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfitobacter sp. NAS-14.1]
gi|83839702|gb|EAP78880.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfitobacter sp. NAS-14.1]
Length = 198
Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats.
Identities = 95/182 (52%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ +F D RG+FS++YS+K L E G+ FVQDNHS S GTIRGLHFQ PP
Sbjct: 18 LPGVIIITPARFGDHRGFFSESYSAKALAEHGITTQFVQDNHSLSMTQGTIRGLHFQVPP 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC G +FD+AVDIR+ SPTYG W +E+S NG Q+ +P GFAHGF+T
Sbjct: 78 HAQDKLVRCGRGALFDVAVDIRKGSPTYGQWFGVELSFENGKQLLVPAGFAHGFVTRAPE 137
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TE+IYK +D+Y+ E + VAW D + I W L I P +SEKD N P L ++SPF ++
Sbjct: 138 TEIIYKCSDYYAQETEGAVAWDDPQVGIDWGL-GEIAPVLSEKDANAPSLAALNSPFTFE 196
Query: 183 GL 184
G+
Sbjct: 197 GV 198
>gi|168212616|ref|ZP_02638241.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens CPE
str. F4969]
gi|168216436|ref|ZP_02642061.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens NCTC
8239]
gi|182625737|ref|ZP_02953505.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens D
str. JGS1721]
gi|170715658|gb|EDT27840.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens CPE
str. F4969]
gi|177908999|gb|EDT71481.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens D
str. JGS1721]
gi|182381550|gb|EDT79029.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens NCTC
8239]
Length = 189
Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 2/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +TYS K +E GL FVQDN S S G +RGLHFQ
Sbjct: 10 KIKDLYIIEPKVFGDERGYFMETYSQKAFEEAGLTMKFVQDNESKSKK-GVLRGLHFQ-T 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G ++D+AVD+R+ SPT+G W + +SA N Q Y+P GFAHGF+ L
Sbjct: 68 KHTQGKLVRVTQGEVWDVAVDLRKGSPTFGQWEGVHLSAENKRQFYVPEGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK TDFY+ E+DSG+ W DK +++ WPL +SEKD+ L ++D PF Y
Sbjct: 128 EAVFNYKCTDFYAPEYDSGLLWNDKDVNVEWPLEGIEEIILSEKDKKQKTLKELDIPFIY 187
Query: 182 DG 183
+G
Sbjct: 188 EG 189
>gi|317130378|ref|YP_004096660.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cellulosilyticus DSM
2522]
gi|315475326|gb|ADU31929.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cellulosilyticus DSM
2522]
Length = 226
Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 117/180 (65%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ + F D+RG+F ++Y+ + +++GL+ +QDNHS S + G +RGLH+Q
Sbjct: 46 KLEGVVIIEPKVFGDNRGFFMESYNQEKFQQVGLKYKLIQDNHSLSVEPGVLRGLHYQLN 105
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ K+VR G I+D+ VDIR+ SPT+G W+ +S +N QI +P GFAHGF TL
Sbjct: 106 PKAQTKIVRVATGAIYDVVVDIRKESPTFGEWIGAILSEHNKRQIVVPKGFAHGFCTLVP 165
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
NT V+YKV ++YS EHD G+ W D I I WP+ + P +SEKD+ P L D F+Y
Sbjct: 166 NTNVLYKVDEYYSKEHDRGILWNDPDIGIEWPICN---PILSEKDKVHPPLTGADINFQY 222
>gi|33637049|gb|AAQ23686.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacillus
stearothermophilus]
Length = 190
Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats.
Identities = 82/181 (45%), Positives = 115/181 (63%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ I + ++D RG+F ++Y+ ++ ++LG FVQDNHS S GTIRGLH+Q
Sbjct: 10 ELDGAVIFEPIVYKDERGFFMESYNEQIFRKLGFDVRFVQDNHSLSVKAGTIRGLHYQLN 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR G I+D+ VDIR+ SPT+G W +S +N Q+ +P GFAHGF TL
Sbjct: 70 PKAQTKLVRVTRGAIYDVIVDIRKGSPTFGKWKGFILSEDNKRQLLVPKGFAHGFCTLVE 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
NTEV YKV ++YS EHD G+ W D ++ I WP+ + P +SEKD N P L + F +
Sbjct: 130 NTEVQYKVDEYYSPEHDRGILWNDPALSIDWPVTN---PILSEKDANHPLLADAEINFVW 186
Query: 182 D 182
+
Sbjct: 187 E 187
>gi|313633864|gb|EFS00584.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria seeligeri FSL
N1-067]
Length = 186
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K + G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHDAGIDMKFIQDNHSLSVEAGVLRGMHYQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+R G I+D+ VD+R+ SPTYG W +S N Q+ +P GFAHGF T+
Sbjct: 67 PRAQTKLIRVGTGAIYDVVVDMRKGSPTYGEWEGFILSEANKHQLLVPQGFAHGFCTITE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N V+YKV YS E+D+G+A+ D ++ITWP +S+KD P L ++ F +
Sbjct: 127 NVNVLYKVDQLYSPENDAGIAYDDPDLNITWPTDK---LILSDKDTKHPRLKDAENNFVW 183
Query: 182 D 182
+
Sbjct: 184 E 184
>gi|122934725|gb|ABM68330.1| RmlC [Geobacillus tepidamans]
Length = 183
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 114/179 (63%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+++ + F D RG+F ++Y+ ++ KELG FVQDNHS S + GT+RGLH+Q P
Sbjct: 8 FKDAFLIEPKVFGDHRGFFMESYNDQVFKELGFNYEFVQDNHSLSIEVGTLRGLHYQLEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ KLVR I G I+D+ VDIR+ S TYG W +S N Q+ +P GFAHGF T+ N
Sbjct: 68 YAQTKLVRVIRGAIYDVIVDIRKGSLTYGKWQGFILSEGNKRQLLVPKGFAHGFCTIVPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TEV+YKV ++YS EHD G+ W D + I WP T P +SEKD P L + ++ F Y
Sbjct: 128 TEVLYKVDNYYSPEHDRGICWNDPDLKIDWP---THSPILSEKDSKHPRLAEAENNFIY 183
>gi|160935035|ref|ZP_02082421.1| hypothetical protein CLOLEP_03911 [Clostridium leptum DSM 753]
gi|156866488|gb|EDO59860.1| hypothetical protein CLOLEP_03911 [Clostridium leptum DSM 753]
Length = 189
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ + F D+RG+F +TY+ K GL VFVQDN S S G +RGLHFQ
Sbjct: 11 IEGLVVVEPKVFGDNRGYFMETYNYNDFKAAGLDMVFVQDNQSKSKK-GVLRGLHFQ-KK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G ++D+AVD+RR S TYG W + +SA N Q Y+P GFAHGF+ +
Sbjct: 69 NPQGKLVRVVSGEVYDVAVDLRRGSDTYGKWYGVLLSAENKKQFYVPEGFAHGFVVMSET 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E +YK T FY + G+ W D I I WP+ + +SEKDQ+ L +SPF +
Sbjct: 129 AEFVYKCTRFYDPSDEGGLMWNDPEIGIDWPVPENAELLLSEKDQHHQPLKDFESPFTME 188
Query: 183 G 183
G
Sbjct: 189 G 189
>gi|325295548|ref|YP_004282062.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065996|gb|ADY74003.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 192
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 90/182 (49%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+K + F D RG+F +TY ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 9 EIPEVVIVKPKVFGDERGFFMETYKKSDFEKAGIDTDFVQDNHSKS-VKGVLRGLHYQLE 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRCI G++FD+AVDIR+ SPT+G WV +E+S+ N L ++IP GFAHGF+TL
Sbjct: 68 PKAQGKLVRCIKGKVFDVAVDIRKGSPTFGKWVGVELSSENKLMLWIPKGFAHGFLTLSE 127
Query: 122 NTEVIYKVTD-FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E+IYKV+ YS EHD + W D I I WPL P +SEKD+ PFL + F
Sbjct: 128 EAEIIYKVSGSEYSPEHDRSIRWNDPDIGIEWPLDGE--PILSEKDKLAPFLKDAEINFV 185
Query: 181 YD 182
Y
Sbjct: 186 YK 187
>gi|261405318|ref|YP_003241559.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. Y412MC10]
gi|261281781|gb|ACX63752.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. Y412MC10]
Length = 185
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+ ++ +D RG+F ++++ ++ K G+ D F+QDNHS S + G IRGLH+Q
Sbjct: 7 KLQGVKRIEPTVHQDHRGFFMESFNDRVFKGCGINDHFIQDNHSMSREAGVIRGLHYQLS 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KL+R ++G I+D+ VDIR SPTYG W +SA N LQ+ +P GFAHGF TL
Sbjct: 67 PEGQTKLIRVVSGAIYDVVVDIRSGSPTYGQWQGFILSAANYLQLLVPKGFAHGFCTLVH 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+TEVIYKV +YS EHD G+AW D ++I WP+ P +S+KD P L ++ + Y
Sbjct: 127 DTEVIYKVDAYYSPEHDRGIAWNDPDLNIDWPVNK---PVLSDKDSKHPRLALAENNYIY 183
Query: 182 DG 183
+G
Sbjct: 184 EG 185
>gi|289434339|ref|YP_003464211.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289170583|emb|CBH27123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 186
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K + G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHDAGIDMKFIQDNHSLSVEAGVLRGMHYQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+R G I+D+ VD+R+ SPTYG W +S N Q+ +P GFAHGF T+
Sbjct: 67 PKAQTKLIRVGTGAIYDVVVDMRKGSPTYGEWEGFILSEANKHQLLVPQGFAHGFCTITE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N V+YKV YS E+D+G+A+ D ++ITWP +S+KD P L ++ F +
Sbjct: 127 NVNVLYKVDQLYSPENDAGIAYDDPDLNITWPTDK---LILSDKDTKHPRLKDAENNFVW 183
Query: 182 D 182
+
Sbjct: 184 E 184
>gi|304407809|ref|ZP_07389460.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus curdlanolyticus
YK9]
gi|304343292|gb|EFM09135.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus curdlanolyticus
YK9]
Length = 185
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 86/182 (47%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V++++T F D RG+F+++YS + E G+ FVQDNHS S + G +RG+H+Q
Sbjct: 7 KLSGVKLIETAVFGDHRGFFTESYSEQRFVENGITHRFVQDNHSLSAEAGVLRGMHYQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR AG I+D+ VDIRR SPT+G W +SA+N Q+ +P GFAHGF TL
Sbjct: 67 PKAQTKLVRVTAGAIYDVVVDIRRGSPTFGQWQGFILSADNKRQLLVPQGFAHGFCTLVP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N EV YKV ++YS E+D G+AW D ++ I WP T P +S KD P L D F+Y
Sbjct: 127 NCEVQYKVDEYYSPENDRGIAWNDPALAIDWP---TNYPILSNKDGKHPVLADADINFDY 183
Query: 182 DG 183
G
Sbjct: 184 KG 185
>gi|328765894|gb|EGF75990.1| hypothetical protein BATDEDRAFT_15110 [Batrachochytrium
dendrobatidis JAM81]
Length = 191
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 117/180 (65%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N+ V+I++ + F+D+RG+F ++++ + +LG F+QDNHS S D IRGLHFQ
Sbjct: 7 NLQDVKIIEPKVFKDNRGYFMESFNQQTFADLGNNYYFIQDNHSLSLDKDVIRGLHFQLS 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR I G I+D+AVDIR+ SPT+G WV + +S N + +P GFAHGF TL
Sbjct: 67 PKAQTKLVRVITGAIYDVAVDIRKGSPTFGSWVGVTLSEENHRMLLVPKGFAHGFCTLTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
NT V YKV +YS E+D G+ W D ++ I WP P +SEKD++ P LN + F+Y
Sbjct: 127 NTHVQYKVDAYYSSENDKGIRWNDPTLAIDWPTSK---PILSEKDRHQPLLNDAELYFQY 183
>gi|288963203|ref|YP_003453482.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azospirillum sp. B510]
gi|288915455|dbj|BAI76938.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azospirillum sp. B510]
Length = 183
Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V+I++ +KF D RG+FS+TY+ K + GL+ FVQDN S S + GT+RGLHFQ
Sbjct: 6 LDIPDVKIIRPKKFGDHRGFFSETYNKKTFEAAGLRYDFVQDNQSLSAEVGTVRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KL+R + G I D+AVDIR++SPT+G VS ISA QI +P GFAHGF TLE
Sbjct: 66 PPFAQDKLLRVVRGAILDVAVDIRKDSPTFGRHVSAVISAAEWNQILVPIGFAHGFCTLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEVIYKVT++YS EHD G+ W D + I WP+ +S KD+ P Q+ F
Sbjct: 126 PDTEVIYKVTNYYSPEHDRGLLWNDPELGIDWPVS-ADKAQLSGKDRTHPTFAQLGDWF 183
>gi|83944595|ref|ZP_00957045.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfitobacter sp. EE-36]
gi|83844572|gb|EAP82459.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfitobacter sp. EE-36]
Length = 190
Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/182 (50%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V ++ +F D RG+FS++YS++ L E G+ FVQDNHS S GTIRGLHFQ PP
Sbjct: 10 LPGVIVITPARFGDYRGFFSESYSAEALAEHGITTPFVQDNHSLSMTQGTIRGLHFQAPP 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC G +FD+AVDIR+ SPTYG W +E+S NG Q+ +P GFAHGF+T
Sbjct: 70 HAQDKLVRCGRGALFDVAVDIRKGSPTYGQWFGVELSFENGKQLLVPAGFAHGFVTRAPE 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TE++YK +D+Y+ E + VAW D ++ I W L D + P +SEKD N P L ++SPF ++
Sbjct: 130 TEIVYKCSDYYARETEGAVAWDDPAVGIDWGLGD-MTPVLSEKDANAPALADLNSPFTFE 188
Query: 183 GL 184
G+
Sbjct: 189 GV 190
>gi|41205691|gb|AAR99611.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacillus
stearothermophilus]
Length = 183
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 116/180 (64%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +L+ + F D RG+F ++Y+ K+ KELG FVQDNHS S + GT+RGLH+Q
Sbjct: 7 KFSNAFLLEPKVFGDHRGFFMESYNDKVFKELGFNYEFVQDNHSLSVEVGTLRGLHYQLE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVR + G I+D+ VDIR+ SPTYG W ++ N Q+ +P GFAHGF T+
Sbjct: 67 PYAQTKLVRVVRGAIYDVIVDIRKGSPTYGEWQGFILTEWNKRQLLVPKGFAHGFCTIVP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
NTEVIYKV ++YS EHD G+ W D + I WP T P +SEKD P L + ++ F Y
Sbjct: 127 NTEVIYKVDNYYSPEHDRGICWNDPDLKIDWP---THSPILSEKDSKHPRLAEAENNFTY 183
>gi|310644249|ref|YP_003949008.1| glucose-1-phosphate thymidylyltransferase [Paenibacillus polymyxa
SC2]
gi|309249200|gb|ADO58767.1| Glucose-1-phosphate thymidylyltransferase [Paenibacillus polymyxa
SC2]
Length = 182
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + +I++ D RG+F ++Y+ +++KE G+ F+QDN S S + G IRGLH+Q
Sbjct: 6 LKLEGAKIIEPVVHGDHRGFFMESYNEQIMKENGIDHAFIQDNQSLSAEAGVIRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R ++G I+D+ +DIR++SPT+G WV + +S +N Q+ +P GFAHGF TL
Sbjct: 66 NPKAQTKLIRVLSGAIYDVILDIRKSSPTFGQWVGVILSEHNRRQLLVPKGFAHGFCTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT+V+YKV ++YS E+D G+ W D ++ I WP T +SEKDQ P L D F+
Sbjct: 126 PNTQVLYKVDEYYSPENDRGILWNDPALGIDWP---TSHAILSEKDQKHPALVNADINFD 182
>gi|218288134|ref|ZP_03492433.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alicyclobacillus
acidocaldarius LAA1]
gi|218241493|gb|EED08666.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alicyclobacillus
acidocaldarius LAA1]
Length = 181
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 116/178 (65%), Gaps = 3/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V +++ FED+RG+F+++Y+ + LG+ FVQDNHS+S GT+RGLH+Q
Sbjct: 7 DIEGVFLIEPDVFEDARGFFTESYNREKFALLGIDVEFVQDNHSYSAAAGTVRGLHYQLE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR + G I+D+ VDIRR+SPT+G WV + +SA+N Q+Y+P GFAHGF TL
Sbjct: 67 PAAQTKLVRVVQGAIYDVVVDIRRHSPTFGRWVGVILSADNRRQLYVPKGFAHGFCTLVP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T V+YKV +YS EHD G+ W D + I WP +SEKD P + + F
Sbjct: 127 HTHVMYKVDTYYSPEHDRGIRWDDPELGIPWPTTK---AVLSEKDAKHPGFREAEINF 181
>gi|303248974|ref|ZP_07335220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio fructosovorans
JJ]
gi|302489623|gb|EFL49561.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio fructosovorans
JJ]
Length = 193
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 81/188 (43%), Positives = 110/188 (58%), Gaps = 3/188 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +K + F D+RG+F +TYS GL FVQDNH+ S G +RGLHFQRPP
Sbjct: 8 IPGLVTIKPKVFGDNRGFFLETYSRAAFAAAGLDYDFVQDNHARSGPKGVLRGLHFQRPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLV + G + D+ VD+R SPTY W +E++ +N +++ +P GFAHG++TL N
Sbjct: 68 STQAKLVWVVRGAVLDVVVDLRVGSPTYKKWFGIELTEDNFMRLMVPRGFAHGYVTLTEN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E +YKV Y D+G+AW D I I WP+ P +SEKD P L + SPF Y
Sbjct: 128 AEFMYKVDAPYVPADDAGIAWNDPEIGIDWPV---AEPILSEKDARQPTLAALGSPFIYQ 184
Query: 183 GLPLLSLN 190
G +
Sbjct: 185 GHDTSGED 192
>gi|110799633|ref|YP_695051.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens ATCC
13124]
gi|110800202|ref|YP_694935.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens ATCC
13124]
gi|168211917|ref|ZP_02637542.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens B
str. ATCC 3626]
gi|110674280|gb|ABG83267.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens ATCC
13124]
gi|110674849|gb|ABG83836.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens ATCC
13124]
gi|170710141|gb|EDT22323.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens B
str. ATCC 3626]
Length = 189
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 2/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +TYS K +E GL FVQDN S S G +RGLHFQ
Sbjct: 10 KIKDLYIIEPKVFGDERGYFMETYSQKAFEEAGLTMKFVQDNESKSKK-GVLRGLHFQ-T 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G ++D+AVD+R+ SPT+G W + +SA N Q Y+P GFAHGF+ L
Sbjct: 68 KHTQGKLVRVTQGEVWDVAVDLRKGSPTFGQWEGVHLSAENKRQFYVPEGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK TDFY+ E+DSG+ W DK +++ WPL +SEKD+ L ++D PF Y
Sbjct: 128 EAVFNYKCTDFYAPEYDSGLLWNDKYVNVEWPLEGIEEIILSEKDKKQKTLKELDIPFIY 187
Query: 182 DG 183
+G
Sbjct: 188 EG 189
>gi|199599660|ref|ZP_03213036.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Lactobacillus
rhamnosus HN001]
gi|258508993|ref|YP_003171744.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
gi|199589448|gb|EDY97578.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Lactobacillus
rhamnosus HN001]
gi|257148920|emb|CAR87893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
gi|259650286|dbj|BAI42448.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
Length = 190
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ + E G+++ F QDN S S + G +RG+H+Q
Sbjct: 9 KLKDVKLVETDVFGDNRGFFTETYTREKFVEAGIKNDFNQDNQSLSAEAGVLRGMHYQMA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 69 PYAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSQYNHRQLLVPKGFAHGFITLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N +YKV +Y+ E D G+A+ D I I WP+ T +SEKDQ+ P L ++ F Y
Sbjct: 129 NVNFVYKVEGYYAPEADRGIAFDDPDIGIDWPMS-TAHLIMSEKDQHHPQLKDAENNFVY 187
>gi|218290277|ref|ZP_03494423.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alicyclobacillus
acidocaldarius LAA1]
gi|218239632|gb|EED06824.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alicyclobacillus
acidocaldarius LAA1]
Length = 181
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 115/178 (64%), Gaps = 3/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V +++ FED+RG+F+++Y+ + LG+ FVQDNHS+S GT+RGLH+Q
Sbjct: 7 DIQGVFLIEPDVFEDARGFFTESYNREKFALLGVDVEFVQDNHSYSAAAGTVRGLHYQLE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR + G I+D+ VDIRR SPT+G WV + +SA+N Q+Y+P GFAHGF TL
Sbjct: 67 PAAQTKLVRVVQGAIYDVVVDIRRQSPTFGRWVGVILSADNRRQLYVPKGFAHGFCTLVP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T V+YKV +YS EHD G+ W D + I WP +SEKD P + + F
Sbjct: 127 HTHVMYKVDAYYSPEHDRGIRWDDPELGIPWPTTK---AVLSEKDAKHPSFREAEINF 181
>gi|329925154|ref|ZP_08280097.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. HGF5]
gi|328939987|gb|EGG36320.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. HGF5]
Length = 185
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+ ++ +D RG+F ++++ ++LK G+ D F+QDNHS S + G IRGLH+Q
Sbjct: 7 KLQGVKRIEPAVHQDHRGFFMESFNDRVLKGCGINDHFIQDNHSMSREAGVIRGLHYQLS 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KL+R ++G I+D+ VDIR SPTYG W +SA N +Q+ +P GFAHGF TL
Sbjct: 67 PEGQTKLIRVVSGAIYDVVVDIRSGSPTYGQWQGFILSAANFIQLLVPKGFAHGFCTLVH 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+TEVIYKV +YS EHD G+AW D ++I WP+ P +S+KD P L ++ + Y
Sbjct: 127 DTEVIYKVDAYYSPEHDRGIAWNDPDLNIDWPVNK---PVLSDKDSKHPRLALAENNYIY 183
Query: 182 DG 183
+G
Sbjct: 184 EG 185
>gi|239906435|ref|YP_002953176.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio magneticus
RS-1]
gi|239796301|dbj|BAH75290.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio magneticus
RS-1]
Length = 185
Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 3/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++K F D RG+F +TYS + + GL FVQDNH+ S G +RGLHFQ PP
Sbjct: 8 IPGLVVIKPNVFGDHRGFFLETYSREAYAKAGLDYDFVQDNHARSGPKGVLRGLHFQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLV G ++D+ VD+R SPTY W +E+SA+N L+ +P GFAHG++TL +
Sbjct: 68 ATQAKLVWVTRGAVYDVVVDLRVGSPTYKKWYGIELSADNFLRFMVPRGFAHGYVTLTED 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E +YKV Y+ + D+G+AW D I I WP+ D P +S+KD P L + SPF Y+
Sbjct: 128 AEFMYKVDAPYAPDLDAGIAWDDPDIGINWPVTD---PVLSQKDAVQPRLAALGSPFVYE 184
>gi|296505692|ref|YP_003667392.1| glucose-1-phosphate thymidylyltransferase [Bacillus thuringiensis
BMB171]
gi|296326744|gb|ADH09672.1| glucose-1-phosphate thymidylyltransferase [Bacillus thuringiensis
BMB171]
Length = 186
Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats.
Identities = 89/177 (50%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V++++ + F D RGWF +T+S + ++E G+ FVQDN SFS GT+RGLH+Q P A
Sbjct: 10 GVKVIEPKVFGDHRGWFMETFSDQAMREAGIDLQFVQDNQSFSATKGTLRGLHYQLNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLVRC G IFD+AVDIR+ SPTYG W +E+SA N Q+ IP GFAHGFMTL + E
Sbjct: 70 QTKLVRCTRGSIFDVAVDIRKGSPTYGQWFGIELSAENKKQLLIPKGFAHGFMTLTDDVE 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
V YKV + Y+ E D G+ W D + I WP+ I P +SEKD+ P L + + F Y
Sbjct: 130 VQYKVDELYAPECDRGIIWNDAEVGIEWPM--EIQPVLSEKDEKAPSLKEAEKNFVY 184
>gi|116491430|ref|YP_810974.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oenococcus oeni PSU-1]
gi|290891010|ref|ZP_06554074.1| hypothetical protein AWRIB429_1464 [Oenococcus oeni AWRIB429]
gi|116092155|gb|ABJ57309.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oenococcus oeni PSU-1]
gi|290479409|gb|EFD88069.1| hypothetical protein AWRIB429_1464 [Oenococcus oeni AWRIB429]
Length = 189
Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V++++T F D RG+F++T++ + ++LGL+ F QDN S S + G +RG+H+Q
Sbjct: 8 SLQDVKLIETEVFGDKRGFFTETWTKEKFEKLGLKFDFTQDNQSLSAEAGVLRGMHYQLA 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ K+VR + G ++D VD+R+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 68 PYAQTKIVRVVTGVVWDCLVDMRKGSPTYGKWEGYILSEYNHRQLLVPKGFAHGFVTLTP 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N +YKV +Y+ + D G+A+ D + I WP + +S+KD P L ++ F Y
Sbjct: 128 NVNFVYKVDGYYAPKADRGIAFDDPDVGIQWP-TNVEHAIMSDKDLKHPLLKDAENNFVY 186
>gi|56684495|gb|AAW22462.1| RmlC [Lactobacillus rhamnosus]
gi|56684515|gb|AAW22480.1| RmlC [Lactobacillus rhamnosus]
Length = 190
Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ + E G+++ F QDN S S + G +RG+H+Q
Sbjct: 9 KLKDVKLVETDVFGDNRGFFTETYTREKFVEAGIKNDFNQDNQSLSAEAGVLRGMHYQMA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 69 PYAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSQYNHRQLLVPKGFAHGFITLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N +YKV +Y+ E D G+A+ D I I WP+ T +SEKDQ+ P L ++ F Y
Sbjct: 129 NVNFVYKVEGYYAPEADRGIAFDDPDIGIDWPMS-TAHLIMSEKDQHHPQLKDAENNFIY 187
>gi|258540230|ref|YP_003174729.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus Lc
705]
gi|56684475|gb|AAW22444.1| RmlC [Lactobacillus rhamnosus]
gi|257151906|emb|CAR90878.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus Lc
705]
Length = 190
Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ + E G+++ F QDN S S + G +RG+H+Q
Sbjct: 9 KLKDVKLVETDVFGDNRGFFTETYTREKFVEAGIKNDFNQDNQSLSAEAGVLRGMHYQMA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 69 PYAQTKLVRVVTGVVEDVLVDIRKGSPTYGHWEGYILSQYNHRQLLVPKGFAHGFITLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N +YKV +Y+ E D G+A+ D I I WP+ T +SEKDQ+ P L ++ F Y
Sbjct: 129 NVNFVYKVEGYYAPEADRGIAFDDPDIGIDWPMS-TAHLIMSEKDQHHPQLKDAENNFIY 187
>gi|149913028|ref|ZP_01901562.1| hypothetical protein RAZWK3B_03530 [Roseobacter sp. AzwK-3b]
gi|149813434|gb|EDM73260.1| hypothetical protein RAZWK3B_03530 [Roseobacter sp. AzwK-3b]
Length = 188
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +L+ R+F D RG+F+++++ K +LG+ FVQDNHS S GT+RGLHFQ P
Sbjct: 7 KLPGVLLLEPRRFGDERGFFAESWNRKTFLDLGIDIDFVQDNHSVSAAVGTVRGLHFQSP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVRC GR D+AVD R+ SPTYG WV E+S NGLQ+ +P GF HGF+T E
Sbjct: 67 PHAQDKLVRCGRGRFLDVAVDARKGSPTYGQWVGCELSFENGLQLLVPKGFLHGFVTREP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+TE+IYK +D+Y+ + D V + D + I W L P +SEKD DSPF Y
Sbjct: 127 DTEIIYKCSDYYAPDCDGAVRFDDPDLGIDWGLDG--APVLSEKDAKAQSFAAFDSPFIY 184
>gi|116754265|ref|YP_843383.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosaeta thermophila PT]
gi|116665716|gb|ABK14743.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosaeta thermophila PT]
Length = 187
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 87/183 (47%), Positives = 115/183 (62%), Gaps = 4/183 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V +++ R F D RG+F ++Y G+++ FVQDNHS S G +RGLH+Q
Sbjct: 8 LDIYDVILIEPRVFRDERGFFMESYKHSEFAAFGIKERFVQDNHSRSRR-GVLRGLHYQN 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQ KLVR ++G IFD+AVDIRR SPTYG WV + +S N +YIP GFAHGFMTL
Sbjct: 67 PPRAQGKLVRAVSGEIFDVAVDIRRGSPTYGRWVGVNLSEENMRMLYIPPGFAHGFMTLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+V+YK TD YS EH++G+ W D I I WP P +S +D P L + F
Sbjct: 127 DVADVMYKTTDEYSPEHEAGIIWNDPGIGIEWP---ASRPVLSPRDAKWPGLRDAVNGFV 183
Query: 181 YDG 183
Y+G
Sbjct: 184 YEG 186
>gi|212224999|ref|YP_002308235.1| hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus
onnurineus NA1]
gi|212009956|gb|ACJ17338.1| hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus
onnurineus NA1]
Length = 185
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++K + FED RG+F +TY ++ G++ FVQDNHS S G +RGLHFQR
Sbjct: 8 LEIPDVILIKPKVFEDERGFFMETYKKSDFEKAGIKGEFVQDNHSKSRY-GVLRGLHFQR 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAK+VR + G I+D+AVD+R+NSPT+G WV + +S +N Q+YIP GFAHGF+ L
Sbjct: 67 QPYAQAKIVRAVRGVIYDVAVDLRKNSPTFGRWVGVILSEHNKYQLYIPRGFAHGFLVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YKV + Y+ +++ G+ W D I I WP+ P VSEKD+ P L +
Sbjct: 127 DVAEVVYKVDNVYAPDYEGGIIWNDPDIGIDWPIDG---PIVSEKDRKWPTLKEA 178
>gi|115374685|ref|ZP_01461963.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stigmatella aurantiaca
DW4/3-1]
gi|310820811|ref|YP_003953169.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stigmatella aurantiaca
DW4/3-1]
gi|115368353|gb|EAU67310.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stigmatella aurantiaca
DW4/3-1]
gi|309393883|gb|ADO71342.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stigmatella aurantiaca
DW4/3-1]
Length = 184
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 108/181 (59%), Gaps = 4/181 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V +++ + F D RG+F +T+ +K + G+ FVQDN+S S GT+RGLHFQ P
Sbjct: 8 IPGVLLIEPKVFGDDRGFFLETFHAKRYADAGIPGPFVQDNYSRS-ARGTLRGLHFQ-EP 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLV+ +AG ++D+AVD+RR SPT+G WV +E+SA N Q+++P GFAHGF
Sbjct: 66 QAQGKLVQVVAGAVYDVAVDVRRGSPTFGKWVGVELSAENRRQLWVPPGFAHGFCVTSEF 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+ YK T Y+ E++ + W D + I WPL P +S KD P L Y+
Sbjct: 126 ADFQYKCTALYAPENERSILWNDPELAIPWPLSG--APKLSAKDAAAPRLKDAPLLPAYE 183
Query: 183 G 183
G
Sbjct: 184 G 184
>gi|295691457|ref|YP_003595150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter segnis ATCC
21756]
gi|295433360|gb|ADG12532.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter segnis ATCC
21756]
Length = 187
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 85/183 (46%), Positives = 121/183 (66%), Gaps = 1/183 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ + D RGWFS+T+ L+E G + FVQDNH S G RGLH+Q+
Sbjct: 6 LAIPEVLLITPARHGDERGWFSETFRQSALEEAGFKAAFVQDNHVRSTTRGIQRGLHYQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KL+RC+ G IFD+AVDIR+ SPTYG WV E+SA N Q+ +P GFAHG++TL
Sbjct: 66 PPHAQDKLLRCVVGAIFDVAVDIRKGSPTYGQWVGAELSAENRQQLLVPKGFAHGYVTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EV+YKVTD+Y+ + + V W D ++ I WP+ + + + +++D P L +IDSPF
Sbjct: 126 DACEVLYKVTDYYAPQAEGAVRWSDPAVGIDWPIPASEITA-NDRDNAAPLLAEIDSPFV 184
Query: 181 YDG 183
Y+
Sbjct: 185 YED 187
>gi|225590484|gb|ACN94858.1| RmlC [Lactobacillus rhamnosus GG]
Length = 199
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ + E G+++ F QDN S S + G +RG+H+Q
Sbjct: 18 KLKDVKLVETDVFGDNRGFFTETYTREKFIEAGIKNDFNQDNQSLSAEAGVLRGMHYQMA 77
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 78 PYAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSQYNHRQLLVPKGFAHGFITLTP 137
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N +YKV +Y+ E D G+A+ D I I WP+ L +SEKDQ+ P L ++ F Y
Sbjct: 138 NVNFVYKVEGYYAPEADRGIAFDDPDIGIDWPMSKAHL-IMSEKDQHHPQLKDAENNFIY 196
>gi|258509034|ref|YP_003171785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
gi|257148961|emb|CAR87934.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
gi|259650325|dbj|BAI42487.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
Length = 190
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ + E G+++ F QDN S S + G +RG+H+Q
Sbjct: 9 KLKDVKLVETDVFGDNRGFFTETYTREKFIEAGIKNDFNQDNQSLSAEAGVLRGMHYQMA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 69 PYAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSQYNHRQLLVPKGFAHGFITLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N +YKV +Y+ E D G+A+ D I I WP+ T +SEKDQ+ P L ++ F Y
Sbjct: 129 NVNFVYKVEGYYAPEADRGIAFDDPDIGIDWPMS-TAHLIMSEKDQHHPQLKDAENNFIY 187
>gi|295792732|gb|ADG29295.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus alvei]
Length = 183
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 81/178 (45%), Positives = 115/178 (64%), Gaps = 3/178 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + I++ D RG+F ++YS K L ELG+ F+QDN S S + G IRGLHFQ
Sbjct: 6 LPLKDAYIIEPVIHGDHRGFFMESYSKKKLNELGIYFNFIQDNQSLSLETGVIRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R I+G I+D+ VDIR++S T+G WV + +S +N Q+ +P GFAHGF TL
Sbjct: 66 NPKAQTKLIRVISGAIYDVIVDIRKSSSTFGQWVGVILSEHNHRQLLVPKGFAHGFCTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
NT+V+YKV ++YS +HD G+ W D S+ I WP P +S+KD+ LP L + +
Sbjct: 126 PNTQVLYKVDEYYSPDHDRGIRWDDPSLGIDWPTSK---PILSDKDRLLPVLKEAEIN 180
>gi|182680403|ref|YP_001834549.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636286|gb|ACB97060.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 191
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ +KF D+RG+F++TY+++ E G+ VFVQDN S S + GTIRGLHFQ
Sbjct: 8 LAIPDVLLIRPKKFGDARGYFAETYNARAYCEAGIDCVFVQDNQSLSVEKGTIRGLHFQV 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP QAKLVR + G I D+AVD+RR SP YG W ++A G Q+++P GFAHGF TL
Sbjct: 68 PPEPQAKLVRVLRGAILDVAVDLRRGSPHYGQWCGATLTAEEGEQLFVPRGFAHGFCTLM 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
TEV YKV FY+ D+G+ + D I+I WPL D +S+KD LPFL SPF
Sbjct: 128 PETEVAYKVDGFYAPGCDAGLRYDDPDINIPWPL-DGKAAMISDKDGKLPFLRDFKSPFT 186
Query: 181 YD 182
++
Sbjct: 187 FE 188
>gi|167753452|ref|ZP_02425579.1| hypothetical protein ALIPUT_01726 [Alistipes putredinis DSM 17216]
gi|167658077|gb|EDS02207.1| hypothetical protein ALIPUT_01726 [Alistipes putredinis DSM 17216]
Length = 190
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + F D RG+F ++YS + + FVQDN S S G +RGLHFQ+
Sbjct: 8 IKDVVIIEPQVFGDDRGYFFESYSQQQFDQAVRPVHFVQDNESKSRR-GVLRGLHFQKGA 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ+KLVR + GR+ D+AVDIRR SPT+G V++E++A N Q+++P GFAHGF L
Sbjct: 67 AAQSKLVRVVQGRVLDVAVDIRRGSPTFGKHVAVELTAENHRQLFVPRGFAHGFSVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D + I W L +S KD+ P L D F+Y
Sbjct: 127 AVFQYKCDNFYAPQSEGAIAWNDPDLGIDWQLP-AEEAILSPKDRAHPRLKDADELFDY 184
>gi|163793777|ref|ZP_02187751.1| dTDP-4-dehydrorhamnose 3,5-epimerase [alpha proteobacterium BAL199]
gi|159180888|gb|EDP65405.1| dTDP-4-dehydrorhamnose 3,5-epimerase [alpha proteobacterium BAL199]
Length = 185
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V+I++ +KF D RG+FS+TYS + L FVQDNHS S G +RGLHFQ
Sbjct: 6 LAIPDVKIIRPKKFGDHRGFFSETYSKPAFEAADLHLDFVQDNHSLSAASGVLRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KL+R + GRIFD+AVDIR S TYG WVS EISA QI +P GFAHGF+TLE
Sbjct: 66 PPFAQDKLLRVVRGRIFDVAVDIRHGSATYGQWVSAEISAEEWNQILVPIGFAHGFVTLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEVIYKVT Y+ EHD G+AW D + I WPL + I P++SEKD P L + F
Sbjct: 126 PDTEVIYKVTAPYAPEHDRGIAWDDPDLGIAWPL-EGIEPTLSEKDTRHPRLADLPVHF 183
>gi|315122655|ref|YP_004063144.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496057|gb|ADR52656.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 199
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 144/196 (73%), Positives = 170/196 (86%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
INPVRILKT+ ED RGWFS+TY+ K+ G +DVFVQDNHSFS + GTIRGLHFQ+PP
Sbjct: 4 INPVRILKTKILEDDRGWFSETYNDNCFKKNGFKDVFVQDNHSFSLNTGTIRGLHFQKPP 63
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAK+VRC++GRIFD+AVD+R++SPTYG W+SLEISA++GLQIYIP GFAHGFMTLE N
Sbjct: 64 HAQAKIVRCVSGRIFDVAVDVRKDSPTYGNWISLEISASSGLQIYIPIGFAHGFMTLEPN 123
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TEVIYKVTDFYS HDSGV WQDKSI I WPLL+ + PS+S+KD NLPFLNQ+DSPF YD
Sbjct: 124 TEVIYKVTDFYSSSHDSGVLWQDKSIGIRWPLLEKVSPSLSDKDMNLPFLNQLDSPFTYD 183
Query: 183 GLPLLSLNMERDLLCV 198
G PLL L+M+RD+ CV
Sbjct: 184 GFPLLPLDMDRDMSCV 199
>gi|228961527|ref|ZP_04123137.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798145|gb|EEM45148.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 186
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 88/177 (49%), Positives = 119/177 (67%), Gaps = 2/177 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V++++ + F D RGWF +T+S + ++E G+ FVQDN SFS GT+RGLH+Q P A
Sbjct: 10 GVKVIEPKVFGDHRGWFMETFSDQAMREAGIDLKFVQDNQSFSATKGTLRGLHYQLNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLVRC G IFD+AVDIR+ SPTYG W +E+SA N Q+ IP GFAHGFMTL + E
Sbjct: 70 QTKLVRCTRGSIFDVAVDIRKGSPTYGQWFGIELSAENKKQLLIPKGFAHGFMTLTDDVE 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
V YKV + Y+ E+D G+ W D + + WP+ I P +SEKD+ P L + ++ F Y
Sbjct: 130 VQYKVDELYAPEYDRGIIWNDAEVGVEWPM--EIQPVLSEKDEKAPSLKEAENNFVY 184
>gi|169831838|ref|YP_001717820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638682|gb|ACA60188.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Desulforudis
audaxviator MP104C]
Length = 190
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 89/181 (49%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I + +++ + F D RG+F +TYS + G++ FVQDNHS S +RGLH+Q+
Sbjct: 8 LTIPDLVLVEPKVFGDERGFFMETYSYRDFAVFGIRAAFVQDNHSLSRG-PVLRGLHYQK 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQAKLVRCI G IFD+AVDIRR SPTYG WV +E+SA N Q+Y+P GFAHGF L
Sbjct: 67 KPMAQAKLVRCIHGAIFDVAVDIRRGSPTYGKWVGVELSAENKRQLYLPRGFAHGFCALT 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EV+YKV ++YS EHD G+ + D + I WP+ P +S KD LP L D+ F
Sbjct: 127 EVVEVVYKVDNYYSPEHDRGIIYNDPDLGIVWPV---ARPLLSPKDARLPRLKDADNSFV 183
Query: 181 Y 181
Y
Sbjct: 184 Y 184
>gi|256963468|ref|ZP_05567639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis
HIP11704]
gi|307272375|ref|ZP_07553631.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0855]
gi|256953964|gb|EEU70596.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis
HIP11704]
gi|306510929|gb|EFM79943.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0855]
Length = 190
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/182 (42%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIRR SPTYG W +S +N Q+ +P GFAHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIVDIRRGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF
Sbjct: 127 NVNFMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 IY 187
>gi|256961442|ref|ZP_05565613.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis Merz96]
gi|293382820|ref|ZP_06628741.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis R712]
gi|293387971|ref|ZP_06632504.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis S613]
gi|312905903|ref|ZP_07764917.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis DAPTO
512]
gi|312908949|ref|ZP_07767812.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis DAPTO
516]
gi|256951938|gb|EEU68570.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis Merz96]
gi|291079811|gb|EFE17175.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis R712]
gi|291082627|gb|EFE19590.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis S613]
gi|310628070|gb|EFQ11353.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis DAPTO
512]
gi|311290733|gb|EFQ69289.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis DAPTO
516]
Length = 190
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHHQLLVPKGFAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF
Sbjct: 127 NVNFMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 IY 187
>gi|84684395|ref|ZP_01012296.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667374|gb|EAQ13843.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Rhodobacterales bacterium
HTCC2654]
Length = 188
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/178 (48%), Positives = 119/178 (66%), Gaps = 2/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V + ++ D+RG+F++T++ + L G+ FVQDNHS S GT+RGLH Q PP
Sbjct: 8 IPGVFVFTPERYGDARGFFAETWNRRQLSAAGVDIDFVQDNHSVSATAGTLRGLHMQTPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC GR+FD+AVDIR +SPT+ WV +E+SA NG Q+ +P GF HGF+T E +
Sbjct: 68 FAQDKLVRCGRGRLFDVAVDIRADSPTFRQWVGVELSAENGKQLLVPRGFLHGFVTREPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
TEV+YK +++Y+ E D V + D I I W L D P +S+KD PFL +D+PF
Sbjct: 128 TEVVYKCSNYYAPECDRAVRFDDPDIGIDWGLTD--APVLSDKDAKAPFLRDLDNPFT 183
>gi|323481258|gb|ADX80697.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis 62]
Length = 190
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E G+ FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDHRGFFTESYSKAKFAEHGIDFDFVQDNHSLSTEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF
Sbjct: 127 NVNFMYKCDNYYNAAADGGIAFNDPTLAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 IY 187
>gi|239831405|ref|ZP_04679734.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum intermedium LMG
3301]
gi|239823672|gb|EEQ95240.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum intermedium LMG
3301]
Length = 183
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 89/176 (50%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ + + RKF D RG+FS+TY++K E G+ FVQDNHS+S G +RGLH+Q
Sbjct: 6 LELDGLLEISPRKFGDDRGFFSETYNAKSFAEAGIDLTFVQDNHSYSAARGVVRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLV G I D+AVDIR+ SPT+G WV+LE+SA QI +P GFAHGFMTL
Sbjct: 66 PPFAQDKLVHVTRGAILDVAVDIRKGSPTFGKWVALEVSAEKWNQILVPKGFAHGFMTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+TEVIYKVT++YS EHD + + D +I I WP+ + + +S+KDQ P L D
Sbjct: 126 EHTEVIYKVTNYYSPEHDRSIRFDDPAIGIDWPIAPSGV-QLSDKDQKAPMLADAD 180
>gi|315160175|gb|EFU04192.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0312]
Length = 190
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF
Sbjct: 127 NVNFMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPF 185
Query: 180 EYDGL 184
Y +
Sbjct: 186 IYSEI 190
>gi|29376701|ref|NP_815855.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis V583]
gi|227520248|ref|ZP_03950297.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0104]
gi|227555319|ref|ZP_03985366.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis HH22]
gi|229545293|ref|ZP_04434018.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX1322]
gi|229549528|ref|ZP_04438253.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis ATCC
29200]
gi|255972231|ref|ZP_05422817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T1]
gi|255975343|ref|ZP_05425929.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T2]
gi|256617233|ref|ZP_05474079.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis ATCC
4200]
gi|256853643|ref|ZP_05559008.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T8]
gi|256956580|ref|ZP_05560751.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis DS5]
gi|257079506|ref|ZP_05573867.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis JH1]
gi|257082114|ref|ZP_05576475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis E1Sol]
gi|257084729|ref|ZP_05579090.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis Fly1]
gi|257087325|ref|ZP_05581686.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis D6]
gi|257090459|ref|ZP_05584820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis CH188]
gi|257416506|ref|ZP_05593500.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis
AR01/DG]
gi|257419747|ref|ZP_05596741.1| dTDP-4-dehydrorhamnose-3,5-epimerase [Enterococcus faecalis T11]
gi|257422093|ref|ZP_05599083.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis X98]
gi|294779045|ref|ZP_06744458.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis PC1.1]
gi|300861183|ref|ZP_07107270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TUSoD
Ef11]
gi|307270367|ref|ZP_07551672.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX4248]
gi|307277277|ref|ZP_07558381.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX2134]
gi|307281879|ref|ZP_07562094.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0860]
gi|307286604|ref|ZP_07566696.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0109]
gi|307292430|ref|ZP_07572286.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0411]
gi|312901449|ref|ZP_07760724.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0470]
gi|312903793|ref|ZP_07762966.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0635]
gi|312953335|ref|ZP_07772177.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0102]
gi|29344165|gb|AAO81925.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis V583]
gi|227072327|gb|EEI10290.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0104]
gi|227175530|gb|EEI56502.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis HH22]
gi|229305346|gb|EEN71342.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis ATCC
29200]
gi|229309643|gb|EEN75630.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX1322]
gi|255963249|gb|EET95725.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T1]
gi|255968215|gb|EET98837.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T2]
gi|256596760|gb|EEU15936.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis ATCC
4200]
gi|256710586|gb|EEU25629.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T8]
gi|256947076|gb|EEU63708.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis DS5]
gi|256987536|gb|EEU74838.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis JH1]
gi|256990144|gb|EEU77446.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis E1Sol]
gi|256992759|gb|EEU80061.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis Fly1]
gi|256995355|gb|EEU82657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis D6]
gi|256999271|gb|EEU85791.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis CH188]
gi|257158334|gb|EEU88294.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis
ARO1/DG]
gi|257161575|gb|EEU91535.1| dTDP-4-dehydrorhamnose-3,5-epimerase [Enterococcus faecalis T11]
gi|257163917|gb|EEU93877.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis X98]
gi|294453875|gb|EFG22264.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis PC1.1]
gi|300850222|gb|EFK77972.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TUSoD
Ef11]
gi|306496559|gb|EFM66120.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0411]
gi|306502315|gb|EFM71596.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0109]
gi|306503833|gb|EFM73055.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0860]
gi|306506207|gb|EFM75373.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX2134]
gi|306513275|gb|EFM81902.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX4248]
gi|310628723|gb|EFQ12006.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0102]
gi|310632867|gb|EFQ16150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0635]
gi|311291438|gb|EFQ69994.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0470]
gi|315025875|gb|EFT37807.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX2137]
gi|315028190|gb|EFT40122.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX4000]
gi|315033452|gb|EFT45384.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0017]
gi|315035720|gb|EFT47652.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0027]
gi|315146138|gb|EFT90154.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX2141]
gi|315146325|gb|EFT90341.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX4244]
gi|315149175|gb|EFT93191.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0012]
gi|315154455|gb|EFT98471.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0031]
gi|315157127|gb|EFU01144.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0043]
gi|315161848|gb|EFU05865.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0645]
gi|315164320|gb|EFU08337.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX1302]
gi|315171507|gb|EFU15524.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX1342]
gi|315173060|gb|EFU17077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX1346]
gi|315575180|gb|EFU87371.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis
TX0309B]
gi|315578166|gb|EFU90357.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX0630]
gi|315582607|gb|EFU94798.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis
TX0309A]
gi|327535586|gb|AEA94420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis OG1RF]
Length = 190
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF
Sbjct: 127 NVNFMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 IY 187
>gi|14590334|ref|NP_142400.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pyrococcus horikoshii OT3]
gi|3256819|dbj|BAA29502.1| 188aa long hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
[Pyrococcus horikoshii OT3]
Length = 188
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 118/175 (67%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++K + FED RG+F +TY ++ G++ FVQDNHS S G +RGLHFQR
Sbjct: 11 LEIPDVVLIKPKVFEDERGFFMETYKKSDFEKAGIKGEFVQDNHSKSKY-GVLRGLHFQR 69
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
YAQAK+VRCI G I+D+AVD+RRNSPT+G +V + +S N Q+YIP GFAHGF+ L
Sbjct: 70 GSYAQAKIVRCIRGVIYDVAVDLRRNSPTFGKYVGVILSEYNKYQLYIPRGFAHGFVVLS 129
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YKV + Y+ +++ G+ W D + I WP+ D P +SEKD+ P L ++
Sbjct: 130 DVAEVVYKVDNVYAPDYEGGLIWNDPDVGIKWPIED---PILSEKDKKWPTLREL 181
>gi|167755094|ref|ZP_02427221.1| hypothetical protein CLORAM_00598 [Clostridium ramosum DSM 1402]
gi|237733479|ref|ZP_04563960.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mollicutes bacterium D7]
gi|167705144|gb|EDS19723.1| hypothetical protein CLORAM_00598 [Clostridium ramosum DSM 1402]
gi|229383514|gb|EEO33605.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coprobacillus sp. D7]
Length = 191
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 90/183 (49%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ D RG+F +TYS+ ELG+ +VFVQDN SF+ GT+RGLHFQ
Sbjct: 7 KIPGVVIIEPDIHGDHRGYFMETYSTSNFHELGIDNVFVQDNMSFTAKKGTLRGLHFQND 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLV C G + D+AVDIR+ SPTY WV++E+S N +IP GFAHGF+TL
Sbjct: 67 PMAQAKLVSCTKGTVIDVAVDIRKGSPTYKQWVAVELSEENKKMFFIPRGFAHGFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITW-PLLDTILPSVSEKDQNLPFLNQIDSPFE 180
N E YKV + YS EHD G+ + D S+++ W LL+ I P +S+KD+N P L++ D F+
Sbjct: 127 NVEFRYKVDNLYSKEHDRGIRYDDPSVNVDWGGLLNGIEPILSDKDKNGPTLDESDCNFK 186
Query: 181 YDG 183
++G
Sbjct: 187 FEG 189
>gi|308071021|ref|YP_003872626.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) [Paenibacillus polymyxa E681]
gi|305860300|gb|ADM72088.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) [Paenibacillus polymyxa E681]
Length = 181
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 78/178 (43%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ +I++ D RG+F ++Y+ +++KE G+ F+QDN S S + G IRGLH+Q P
Sbjct: 7 LSGSKIIEPVVHGDHRGFFMESYNEQIMKENGINYAFIQDNQSLSVETGVIRGLHYQLKP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KL+R ++G I+D+ +DIR++SPT+G WV + +S +N Q+ +P GFAHGF TL N
Sbjct: 67 KAQTKLIRVLSGAIYDVILDIRKSSPTFGQWVGVILSEHNRRQLLVPKGFAHGFCTLVPN 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
T+V+YKV ++YS E+D G+ W D ++ I WP T +SEKDQ P L D F+
Sbjct: 127 TQVLYKVDEYYSPENDRGILWNDPALGIDWP---TSHAILSEKDQKHPVLADADINFD 181
>gi|315166501|gb|EFU10518.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX1341]
Length = 190
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ +DIR+ SPTYG W +S +N Q+ +P GFAHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIIDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF
Sbjct: 127 NVNFMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 IY 187
>gi|315923820|ref|ZP_07920049.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622853|gb|EFV02805.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 188
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 80/183 (43%), Positives = 112/183 (61%), Gaps = 3/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V ++ + F D RG+F +TYS+ +G+ ++FVQDN S++ GT+RG+HFQ
Sbjct: 7 SIPGVCVVTPKVFGDRRGYFMETYSTAAFAAIGIDNIFVQDNRSYTAKKGTLRGIHFQNA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLV + G + D+AVD+R SPTY WV E+SA N ++IP GF HGF+TL
Sbjct: 67 PMAQAKLVSVVRGTVMDVAVDLRAGSPTYRQWVGAELSAENKRMLFIPRGFGHGFVTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ E YKV + YS EHD G+ + D +I + W + D P +SEKD P L D F Y
Sbjct: 127 DVEFAYKVDNLYSPEHDRGIRFNDPAIGVDWGIAD---PILSEKDMTSPLLADSDCNFVY 183
Query: 182 DGL 184
+
Sbjct: 184 EEA 186
>gi|256762995|ref|ZP_05503575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T3]
gi|256684246|gb|EEU23941.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis T3]
Length = 190
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDHRGFFTESYSKTKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF
Sbjct: 127 NVNFMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 IY 187
>gi|242278516|ref|YP_002990645.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio salexigens DSM
2638]
gi|242121410|gb|ACS79106.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio salexigens DSM
2638]
Length = 183
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +++ + F D RG+F ++++ + E GL FVQDNH++S G IRGLH Q P
Sbjct: 7 EFPGLVVIEPKVFRDRRGFFLESFNKNVFAENGLPTDFVQDNHAYSSGLGVIRGLHLQMP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLV G + D+ VD+R+ SPTY +E+SA N L+++IP GFAHG+ TL
Sbjct: 67 PHAQAKLVWVTRGAVNDVVVDLRKGSPTYRRSFKIELSAENFLRLFIPKGFAHGYETLTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E +YKV Y+ ++G+ W D +DI W + P +S+KD LP L Q DSPFE+
Sbjct: 127 ENEFMYKVDSGYAPGSEAGIRWDDPELDIDWKTKN---PVLSDKDLELPLLAQFDSPFEF 183
>gi|241889232|ref|ZP_04776535.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gemella haemolysans ATCC
10379]
gi|241864069|gb|EER68448.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gemella haemolysans ATCC
10379]
Length = 190
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 80/182 (43%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ FED RG+F ++YS + K+LG+ FVQDNHS S + G +RGLHFQR
Sbjct: 7 KLKDVKIIEPDVFEDERGFFMESYSEEKYKKLGIDFNFVQDNHSLSVEAGVVRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R+ SPTYG W S +S +N Q+ +P GFAHGF TL
Sbjct: 67 NAAQTKLIRVVTGEVLDVVVDLRKGSPTYGQWGSFILSEHNRRQLLVPRGFAHGFATLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y+ E D+G+A+ DK++ I W + D +S+KD+NLP + + + F
Sbjct: 127 NVNFMYKCDNYYNAEADAGIAFDDKALGIDWQI-DLSKAIISDKDRNLPTFKEFEKSNDF 185
Query: 180 EY 181
EY
Sbjct: 186 EY 187
>gi|16127863|ref|NP_422427.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter crescentus CB15]
gi|221236684|ref|YP_002519121.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter crescentus
NA1000]
gi|13425385|gb|AAK25595.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter crescentus CB15]
gi|220965857|gb|ACL97213.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter crescentus
NA1000]
Length = 185
Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats.
Identities = 85/181 (46%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ + D RGWFS+T+ L+E G Q FVQDNH S G RGLH+Q+
Sbjct: 6 LAIPEVLLITPARHGDERGWFSETFRQSALEEAGFQAAFVQDNHVRSTTRGIQRGLHYQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KL+RC+ G IFD+AVDIR+ SPT+G WV E+SA N Q+ +P GFAHG++TL
Sbjct: 66 PPHAQDKLLRCVVGSIFDVAVDIRKGSPTFGHWVGAELSAENRQQLLVPKGFAHGYVTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EV+YKVTD+Y+ + + GV W D +I I WP+ + + +++D P L +I++PF
Sbjct: 126 DACEVLYKVTDYYAPQAEGGVRWSDPAIGIEWPIPLNEITA-NDRDNAAPLLAEIETPFA 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|160914760|ref|ZP_02076974.1| hypothetical protein EUBDOL_00767 [Eubacterium dolichum DSM 3991]
gi|158433300|gb|EDP11589.1| hypothetical protein EUBDOL_00767 [Eubacterium dolichum DSM 3991]
Length = 191
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/183 (49%), Positives = 121/183 (66%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++T F D RG+FS+TYS ELG+ FVQDN SFS GT+RGLH+Q P
Sbjct: 7 KIPGVLIIETDVFGDHRGYFSETYSKPKYAELGIDVEFVQDNMSFSAQKGTLRGLHWQNP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ+KLV C G + D+AVDIR+ SPTYG WVS+E++A N Q +IP GFAHGF+T+
Sbjct: 67 PYAQSKLVSCTKGAVIDVAVDIRKGSPTYGEWVSVELTAENHRQFFIPQGFAHGFLTISD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ E YKV + Y+ E + G+ + D S+++ W LL+ I P +SEKD + P L ++ F
Sbjct: 127 DVEFRYKVDNVYNKESEGGMRYDDPSVNVDWGSLLNGIEPVLSEKDAHGPTLEDANNQFV 186
Query: 181 YDG 183
Y
Sbjct: 187 YKE 189
>gi|325571038|ref|ZP_08146610.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus casseliflavus
ATCC 12755]
gi|325156123|gb|EGC68309.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus casseliflavus
ATCC 12755]
Length = 193
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 78/182 (42%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ F D RG+F+++YS +E G+ FVQDNHS S + G +RGLHFQ+
Sbjct: 10 KLTDVLILEPAVFGDHRGFFTESYSQADFQEAGITQTFVQDNHSLSVEAGVLRGLHFQKG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGFMTL
Sbjct: 70 TAAQTKLIRVVTGAVLDVIVDIRKGSPTYGEWEGYILSESNQRQLLVPKGFAHGFMTLTS 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y + D+G+A+ D + I WP+ +SEKDQ+ P L + +PF
Sbjct: 130 NVNFLYKCDNYYDAQADAGIAFDDPDLAIDWPIAKEKA-ILSEKDQHHPTLKAFEEQNPF 188
Query: 180 EY 181
Y
Sbjct: 189 IY 190
>gi|256831149|ref|YP_003159877.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfomicrobium baculatum
DSM 4028]
gi|256580325|gb|ACU91461.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfomicrobium baculatum
DSM 4028]
Length = 187
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 87/183 (47%), Positives = 114/183 (62%), Gaps = 3/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +LK + F D RG+F +TYS + L GL FVQDN +FS G +RGLHFQ P
Sbjct: 7 EIPGVLVLKPKVFGDHRGFFCETYSRRQLIAHGLDVDFVQDNEAFSAQAGVLRGLHFQTP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QAKLVR G ++D+ VD+R SPT+G W +SA N LQ++IP G AHG+MTLE
Sbjct: 67 PMTQAKLVRVGRGAVYDVVVDLRTGSPTFGRWQGFTLSAANFLQLFIPAGLAHGYMTLES 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T+ +YKV +YS EHD G++ D + I WP + P +S+KD LP L SPF
Sbjct: 127 DTQFLYKVDQYYSPEHDGGISCLDPVLGIDWP---DLPPIMSDKDVRLPCLADFSSPFRM 183
Query: 182 DGL 184
+G
Sbjct: 184 EGA 186
>gi|291513885|emb|CBK63095.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alistipes shahii WAL 8301]
Length = 187
Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 104/181 (57%), Gaps = 2/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +L+ F D+RG+F + +S + EL FVQDN S S G +RGLHFQ+
Sbjct: 7 EIPGVVLLEPEVFGDARGYFMERFSQRRFDELVGPVRFVQDNESKSRY-GVVRGLHFQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLV + GR+ D+AVDIRR SPT+G V+ + N Q++IP GFAHGF L
Sbjct: 66 EYAQAKLVSVVRGRVLDVAVDIRRGSPTFGRHVAALLDGENKRQLFIPRGFAHGFAVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK ++Y+ + G+AW D ++ I W L + +SEKD+ P L FEY
Sbjct: 126 EAVFQYKCDNYYAPGSEGGIAWDDPALAIDWRLPAGEI-LLSEKDRRHPKLADAPELFEY 184
Query: 182 D 182
D
Sbjct: 185 D 185
>gi|306842189|ref|ZP_07474858.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. BO2]
gi|306287776|gb|EFM59207.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. BO2]
Length = 183
Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 122/176 (69%), Gaps = 1/176 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V + RKF D RG+FS+TY++K E G+ FVQDNHS+S G +RGLH+Q
Sbjct: 6 LGLDGVFEISPRKFGDDRGFFSETYNAKSFAEAGIDLTFVQDNHSYSAAKGVVRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR G I D+AVDIR++SPT+G WV+LE+SA+ QI +P GFAHGFMTL
Sbjct: 66 PPFAQDKLVRVTRGAILDVAVDIRKSSPTFGKWVALEVSADKWNQILVPKGFAHGFMTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
NTEVIYKVTD+YS EHD + + D +I I WP+ + + +S+KDQ P +
Sbjct: 126 ENTEVIYKVTDYYSPEHDRSIRFDDPAIGIDWPVASSGV-QLSDKDQKAPLFADAE 180
>gi|14521384|ref|NP_126860.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pyrococcus abyssi GE5]
gi|5458602|emb|CAB50090.1| rfbC dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)
(dTDP-4-keto-6-deoxyglucose 3,5-epimerase)
(dTDP-L-rhamnose synthetase) [Pyrococcus abyssi GE5]
Length = 185
Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++K + FED RG+F +TY ++ G++ FVQDNHS S G +RGLHFQ+
Sbjct: 8 LSIPDVILIKPKVFEDERGFFMETYKKSDFEKAGIKGEFVQDNHSRSKY-GVLRGLHFQK 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAK+VRCI G IFD+AVD+R+NSPT+G WV + +S N Q+YIP GFAHGF+ L
Sbjct: 67 EPYAQAKIVRCIRGVIFDVAVDLRKNSPTFGKWVGVILSEFNKWQLYIPRGFAHGFLVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YKV + Y+ E++ G+ W D ++I WP+ + P +SEKD+ P L ++
Sbjct: 127 DVAEVVYKVDNVYAPEYEGGLIWNDPDVNIKWPIDN---PILSEKDKKWPTLKEL 178
>gi|254295500|ref|YP_003061522.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hirschia baltica ATCC 49814]
gi|254044031|gb|ACT60825.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hirschia baltica ATCC 49814]
Length = 188
Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V+ + +F D+RG+FS+TYS + + GL +VQDNHS S + +RGLHFQ
Sbjct: 6 LGLDGVKEITPARFGDARGFFSETYSEQRFSDAGLPTGWVQDNHSLSAEAFVLRGLHFQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR + G IFD+AVDIR+NSP YG WV + ++A G QI +P GFAHGF+TL
Sbjct: 66 DPFAQDKLVRVLKGEIFDVAVDIRKNSPDYGKWVGITLTAEKGNQILVPKGFAHGFLTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
N EV YKVT Y+ E+D G+ W D +I I WPL + P +S KD P L +D+ FE
Sbjct: 126 PNVEVAYKVTSGYAPENDRGIIWNDPAIGIDWPL-NGHEPQLSGKDAVAPLLADVDNNFE 184
Query: 181 YD 182
Y
Sbjct: 185 YK 186
>gi|259503868|ref|ZP_05746770.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus antri DSM
16041]
gi|259168169|gb|EEW52664.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus antri DSM
16041]
Length = 191
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +I++T F D RG+F++TY+ + G+ F QDN S S + G +RG+H+Q
Sbjct: 9 SLPDAKIVETDVFGDHRGFFTETYTKNKFEAAGINVEFTQDNQSLSVEPGVLRGMHYQLA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+Q KL+R + G I+D+ VDIR+ SP YG W +S N Q+ +P GFAHGF+TL
Sbjct: 69 PYSQTKLLRAVTGAIYDVIVDIRKGSPAYGKWEGFILSEYNHRQLLVPKGFAHGFVTLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N V YKV +Y+ E D G+A+ D +DI WP+ L +SEKDQ+ P + F Y
Sbjct: 129 NVNVAYKVDGYYAPEADRGIAFDDPDLDIKWPMPVDHL-ILSEKDQHHPAFKDAEINFTY 187
>gi|257893558|ref|ZP_05673211.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,408]
gi|257829937|gb|EEV56544.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,408]
Length = 197
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL+ FVQDNHS S + G +RGLHFQ+
Sbjct: 14 KLTDVKIVEMDVFGDHRGFFTESYSKAKFAEHGLKYDFVQDNHSLSAEAGVLRGLHFQKG 73
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P G+AHGF+TL
Sbjct: 74 EAAQTKLIRVVTGAVLDVVVDIRKGSPTYGQWDGFILSEHNHRQLLVPKGYAHGFVTLTP 133
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ E D G+A+ D + I WP+ D +SEKD P L + ++PF
Sbjct: 134 NVNFLYKCDNYYNAEADGGIAFDDPDLAIDWPI-DPSRAIMSEKDHRHPTLKEFEAENPF 192
Query: 180 EY 181
Y
Sbjct: 193 VY 194
>gi|83582768|ref|YP_425074.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodospirillum rubrum ATCC
11170]
gi|83578084|gb|ABC24634.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodospirillum rubrum ATCC
11170]
Length = 188
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/181 (49%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V+IL+ KF D RG+FS+TY+ L E+G+ F+QDNHSFS GT+RGLHFQ
Sbjct: 8 LDIAEVKILRPAKFGDDRGFFSETYNKVALAEVGITLEFIQDNHSFSAKAGTVRGLHFQT 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KL+R + G +FD+AVD+R SPTYG VS ISA QI IP GFAHG T+E
Sbjct: 68 PPFAQDKLIRVVRGALFDVAVDLRVGSPTYGQSVSAVISAAAWNQILIPAGFAHGLCTIE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TEV+YKV+ YS +HD G+ W D ++ I WP+ +S+KD P L + + F
Sbjct: 128 PDTEVLYKVSAPYSPDHDKGLLWNDPALGIEWPVSPG-AAILSDKDARQPVLADLPAYFT 186
Query: 181 Y 181
Y
Sbjct: 187 Y 187
>gi|295397282|ref|ZP_06807377.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aerococcus viridans ATCC
11563]
gi|294974488|gb|EFG50220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aerococcus viridans ATCC
11563]
Length = 183
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ + F D RGWF++TYS + KE G+ F+QDNHS S GT+RGLHFQ
Sbjct: 7 DIEDVIIIEPKVFGDHRGWFTETYSKEKFKEFGIDIDFIQDNHSLSAQKGTLRGLHFQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRC G+I D+AVDIR SPTY WV++E++ N Q+ +P GFAHGF+TL
Sbjct: 67 PKAQTKLVRCTKGKILDVAVDIREGSPTYKKWVAVELTEENKKQLLVPKGFAHGFITLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N EV YKV ++YS E+D + + D I++ W + P +SEKD + P L++ D+ F+Y
Sbjct: 127 NVEVQYKVDEYYSPENDRSIRFDDPEINVDWGID---SPILSEKDLSAPMLSESDANFKY 183
>gi|312868786|ref|ZP_07728977.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus oris
PB013-T2-3]
gi|311095685|gb|EFQ53938.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus oris
PB013-T2-3]
Length = 191
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 110/180 (61%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +I++T F D RG+F++TY+ +E G+ F QDN S S + G +RG+H+Q
Sbjct: 9 SLPDAKIVETDVFGDHRGFFTETYTKNKFEEAGVNVEFTQDNQSLSVEPGVLRGMHYQLA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+Q KL+R + G I+D+ VDIR+ SP YG W +S N Q+ +P GFAHGF+TL
Sbjct: 69 PYSQTKLLRAVTGAIYDVIVDIRKGSPAYGKWEGFILSEYNHRQLLVPKGFAHGFVTLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N V YKV +Y+ E D G+A+ D +DI WP+ L +SEKDQ+ P + F Y
Sbjct: 129 NVNVAYKVDGYYAPEADRGIAFDDPDLDIKWPMPVDHL-ILSEKDQHHPAFKDAEINFTY 187
>gi|325836661|ref|ZP_08166204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Turicibacter sp. HGF1]
gi|325491186|gb|EGC93474.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Turicibacter sp. HGF1]
Length = 193
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F ++YS K E GL FVQDN S S G +RGLHFQ
Sbjct: 10 KIPDLYIIEPKVFGDERGYFMESYSQKDFTEAGLTMTFVQDNESKSRK-GVLRGLHFQTK 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR G ++D+AVD+R+ SPTYG W + +SA N Q Y+P GFAHGF+
Sbjct: 69 QT-QGKLVRVTQGEVWDVAVDLRKGSPTYGQWEGVYLSAENKRQFYVPEGFAHGFVVTSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS-PFE 180
YK TDFY+ E+DSG+ W D+ + + WPL +SEKDQ L ++ PF
Sbjct: 128 EAIFNYKCTDFYAPEYDSGLLWNDEDVAVKWPLEGLGEILLSEKDQKQKTLKELKDLPFI 187
Query: 181 YDG 183
Y+G
Sbjct: 188 YEG 190
>gi|115345656|ref|YP_771837.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseobacter denitrificans OCh
114]
gi|115292977|gb|ABI93429.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseobacter denitrificans OCh
114]
Length = 198
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/183 (49%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +L ++F D+RG+FS+++S++ + GL +VQDNHS S GT+RGLHFQ P
Sbjct: 16 KLAGVFVLTPKRFGDARGFFSESWSAREMAAQGLDFTWVQDNHSLSMQTGTVRGLHFQSP 75
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVRC G FD+AVDIRR SPTYG WV E+S NG Q+ +PTGF HGF T +
Sbjct: 76 PHAQAKLVRCGRGAFFDVAVDIRRGSPTYGQWVGAELSYENGKQMLVPTGFLHGFATRQP 135
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TE+IYK +D+Y+ E D V + +I I W L D + P +S+KD L DSPF +
Sbjct: 136 ETEIIYKCSDYYAPECDGAVRFDCPTIGIDWGLGD-LEPVLSDKDAAAQGLADFDSPFVW 194
Query: 182 DGL 184
+G+
Sbjct: 195 EGV 197
>gi|69244638|ref|ZP_00602902.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium DO]
gi|257882964|ref|ZP_05662617.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,502]
gi|257885215|ref|ZP_05664868.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,501]
gi|257891454|ref|ZP_05671107.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,410]
gi|258614493|ref|ZP_05712263.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium DO]
gi|260560530|ref|ZP_05832704.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium C68]
gi|261206555|ref|ZP_05921255.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TC 6]
gi|289565465|ref|ZP_06445914.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium D344SRF]
gi|293553222|ref|ZP_06673859.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1039]
gi|293560232|ref|ZP_06676732.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1162]
gi|293568262|ref|ZP_06679586.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1071]
gi|294614673|ref|ZP_06694575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1636]
gi|294619030|ref|ZP_06698525.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1679]
gi|294620973|ref|ZP_06700172.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium U0317]
gi|314940009|ref|ZP_07847202.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
TX0133a04]
gi|314941887|ref|ZP_07848751.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0133C]
gi|314950067|ref|ZP_07853354.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0082]
gi|314952414|ref|ZP_07855420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0133A]
gi|314993217|ref|ZP_07858597.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0133B]
gi|314997807|ref|ZP_07862719.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
TX0133a01]
gi|68196229|gb|EAN10658.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium DO]
gi|257818622|gb|EEV45950.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,502]
gi|257821067|gb|EEV48201.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,501]
gi|257827814|gb|EEV54440.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,231,410]
gi|260073532|gb|EEW61860.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium C68]
gi|260079265|gb|EEW66956.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TC 6]
gi|289162794|gb|EFD10645.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium D344SRF]
gi|291588974|gb|EFF20798.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1071]
gi|291592411|gb|EFF24018.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1636]
gi|291594691|gb|EFF26073.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1679]
gi|291599431|gb|EFF30449.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium U0317]
gi|291602632|gb|EFF32847.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1039]
gi|291605804|gb|EFF35238.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E1162]
gi|313588179|gb|EFR67024.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
TX0133a01]
gi|313592298|gb|EFR71143.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0133B]
gi|313595457|gb|EFR74302.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0133A]
gi|313599312|gb|EFR78157.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0133C]
gi|313640742|gb|EFS05322.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
TX0133a04]
gi|313643602|gb|EFS08182.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX0082]
Length = 190
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL+ FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLTDVKIVEMDVFGDHRGFFTESYSKAKFAEHGLKYDFVQDNHSLSAEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P G+AHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVVVDIRKGSPTYGQWDGFILSEHNHRQLLVPKGYAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ E D G+A+ D + I WP+ D +SEKD P L + ++PF
Sbjct: 127 NVNFLYKCDNYYNAEADGGIAFDDPDLAIDWPI-DPSRAIMSEKDHRHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 VY 187
>gi|56965452|ref|YP_177184.1| dTDP-dehydrorhamnose 3,5-epimerase [Bacillus clausii KSM-K16]
gi|56911696|dbj|BAD66223.1| dTDP-dehydrorhamnose 3,5-epimerase [Bacillus clausii KSM-K16]
Length = 181
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/178 (45%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+L+ F D RG+F ++Y+ KE+G++ F+QDNHS S GT+RGLH+Q
Sbjct: 7 KFADAFLLEPTVFGDHRGFFMESYNKDTFKEIGIEIDFIQDNHSLSQTPGTLRGLHYQLA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+R G I+D+ VDIR+ S TYG W ++A N Q+ +P GFAHGF TL
Sbjct: 67 PKAQTKLIRATKGAIYDVIVDIRKESSTYGQWQGFILTAENKRQLLVPKGFAHGFCTLVE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NTEV YKV + YS EHD G+AW D + I WP+ + P +S+KD P L Q ++ F
Sbjct: 127 NTEVQYKVDELYSPEHDRGIAWDDPVLSIDWPVSN---PILSDKDVKHPNLEQAENNF 181
>gi|289549232|ref|YP_003474220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermocrinis albus DSM 14484]
gi|289182849|gb|ADC90093.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermocrinis albus DSM 14484]
Length = 190
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 86/182 (47%), Positives = 113/182 (62%), Gaps = 2/182 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ F D RG+F + + ++ G+ FVQDNHS S G +RGLHFQ
Sbjct: 8 LEIPDVVLIRPVVFTDERGFFMEIFKRSDFEKAGIDVDFVQDNHSRS-KKGVLRGLHFQL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ GRIFD+AVD+R SPTYG WV +E+S N L ++IP GFAHGF+TL
Sbjct: 67 EPYAQGKLVRCVKGRIFDVAVDLRSGSPTYGRWVGVELSEENHLMLWIPKGFAHGFLTLS 126
Query: 121 MNTEVIYKVTD-FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+V+YKV+ Y E D+G+ W D I I WPL ++S KD +LPFL F
Sbjct: 127 EEADVLYKVSGAEYRPEADAGIRWNDPDIGIAWPLHLVENLTISPKDSSLPFLKDAKINF 186
Query: 180 EY 181
Y
Sbjct: 187 RY 188
>gi|89056335|ref|YP_511786.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Jannaschia sp. CCS1]
gi|88865884|gb|ABD56761.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Jannaschia sp. CCS1]
Length = 215
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 87/183 (47%), Positives = 119/183 (65%), Gaps = 2/183 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + ++ +F D+RG+F++TYS+ L + G+ FVQDNHS S D GT+RGLHFQ PP
Sbjct: 35 LEGLVVITPPRFGDARGFFAETYSAAKLADHGIMTQFVQDNHSLSEDVGTVRGLHFQGPP 94
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC G +FD+ VDIR+ SPT+G W +E++ NG Q+ +P GFAHGF+T
Sbjct: 95 HAQDKLVRCGRGCLFDVVVDIRKGSPTFGQWFGIELTFENGKQLLVPAGFAHGFVTRAPG 154
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TE+IYK +DFY+ E + + W D I I W L D P +S KD L +DSPF Y+
Sbjct: 155 TEIIYKCSDFYAPETEGAIIWNDPKIGIDWRLEDD--PVLSGKDAVAGTLADLDSPFIYE 212
Query: 183 GLP 185
P
Sbjct: 213 AKP 215
>gi|195953910|ref|YP_002122200.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hydrogenobaculum sp. Y04AAS1]
gi|195933522|gb|ACG58222.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hydrogenobaculum sp. Y04AAS1]
Length = 190
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 95/183 (51%), Positives = 129/183 (70%), Gaps = 2/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V ++K + F+D RG+F ++Y ++ G+ D+F+QDNHS S G +RGLH+Q+
Sbjct: 9 DIKEVILIKPKVFKDERGFFLESYKKSEFEKNGITDIFIQDNHSKSVK-GVLRGLHYQKE 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRCI G+IFD+AVDIR+NSPTYG WV E+S N L ++IP GFAHGF+TL
Sbjct: 68 PEAQGKLVRCIKGKIFDVAVDIRKNSPTYGRWVGYELSEENKLMLFIPKGFAHGFLTLSE 127
Query: 122 NTEVIYKVTD-FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E+IYKV++ YS EHD G+ W DK+I+I WPL + +S+KD+NLP L Q D+ F
Sbjct: 128 EAEIIYKVSEAEYSKEHDKGIIWNDKTINIKWPLENIKEVILSDKDKNLPTLEQADNNFL 187
Query: 181 YDG 183
Y G
Sbjct: 188 YGG 190
>gi|304438711|ref|ZP_07398649.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304368360|gb|EFM22047.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 186
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 4/182 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ + F D+RGWF +++S+K +++ G+ FVQDNHSFS GT+RGLH+Q P
Sbjct: 8 LPGVVIIEPQVFGDARGWFMESWSAKKMEDAGIHVAFVQDNHSFSAQKGTLRGLHYQLNP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQAKL+R G IFD+AVDIRR SPTY WV +E+SA N Q++IP GFAHGF+TL N
Sbjct: 68 MAQAKLLRASRGAIFDVAVDIRRGSPTYAQWVGVELSAENYRQLFIPRGFAHGFITLTDN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ-IDSPFEY 181
EV YK + Y+ + D + W D +I + WPL T +SEKD P L + + F Y
Sbjct: 128 VEVQYKADNLYAPDCDGNIRWDDPAIGVAWPLTPT---VLSEKDAAAPLLAERSELNFVY 184
Query: 182 DG 183
+G
Sbjct: 185 EG 186
>gi|3608395|gb|AAC35921.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis OG1RF]
Length = 190
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+ A
Sbjct: 10 DVKIIEMDVFGDHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKGEAA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGF+TL N
Sbjct: 70 QTKLIRVVTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTPNVN 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPFEY 181
+YK ++Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF Y
Sbjct: 130 FMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPFIY 187
>gi|83950202|ref|ZP_00958935.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseovarius nubinhibens ISM]
gi|83838101|gb|EAP77397.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseovarius nubinhibens ISM]
Length = 180
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/180 (49%), Positives = 127/180 (70%), Gaps = 1/180 (0%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
V IL R+F D+RG+FS++++ ++++E G++ FVQDNHS S D GT+RGLHFQ PP+
Sbjct: 2 PGVLILTPRRFADARGFFSESWNQRVMEEAGIEIAFVQDNHSLSRDVGTVRGLHFQSPPH 61
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
AQAKLVRC G ++D+AVD+RR SP+YG WV +E+SA+NG Q+ IP GF HGF+T E +T
Sbjct: 62 AQAKLVRCGRGALYDVAVDVRRGSPSYGKWVGVELSADNGRQLLIPAGFLHGFVTREPDT 121
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDG 183
EVIYK +DFY+ E D V + D + I W + + +S+KD+ D+PF ++G
Sbjct: 122 EVIYKCSDFYAPECDGAVRFDDPDLGIDWGI-EASAAVLSDKDRAAQSFAAFDTPFVWEG 180
>gi|149203262|ref|ZP_01880232.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseovarius sp. TM1035]
gi|149143095|gb|EDM31134.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseovarius sp. TM1035]
Length = 189
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N+ V IL + D+RG+FS++++ + ++E G+ FVQDNHS S GT+RGLHFQ P
Sbjct: 7 NLPGVVILTPARHGDTRGFFSESWNRRRMQEAGITIDFVQDNHSLSEQVGTVRGLHFQSP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVRC G ++D+AVDIRR SPTYG WV +++S NG Q+ IP GF HGF+T
Sbjct: 67 PHAQAKLVRCGRGALYDVAVDIRRGSPTYGQWVGVDLSFENGRQLLIPEGFLHGFVTRAP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TE+IYK +D+Y+ E D V + D I I W + D +S KD P L + SPF Y
Sbjct: 127 MTEIIYKCSDYYAPECDGAVRFDDPEIGIDWGI-DPAAAVLSGKDAKAPLLREFVSPFVY 185
Query: 182 D 182
+
Sbjct: 186 E 186
>gi|227550496|ref|ZP_03980545.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX1330]
gi|257888523|ref|ZP_05668176.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,141,733]
gi|257897102|ref|ZP_05676755.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium Com12]
gi|257899041|ref|ZP_05678694.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium Com15]
gi|293377325|ref|ZP_06623529.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium PC4.1]
gi|293572519|ref|ZP_06683498.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E980]
gi|227180397|gb|EEI61369.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium TX1330]
gi|257824577|gb|EEV51509.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,141,733]
gi|257833667|gb|EEV60088.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium Com12]
gi|257836953|gb|EEV62027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium Com15]
gi|291607436|gb|EFF36779.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium E980]
gi|292644017|gb|EFF62123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium PC4.1]
Length = 190
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLTDVKIVEMDVFGDHRGFFTESYSKAKFAEHGLDYDFVQDNHSLSAEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W +S +N Q+ +P G+AHGF+TL
Sbjct: 67 EAAQTKLIRVVTGAVLDVVVDIRKGSPTYGQWDGFILSEHNHRQLLVPKGYAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ E D G+A+ D + I WP+ D +SEKD P L + ++PF
Sbjct: 127 NVNFLYKCDNYYNAEADGGIAFDDPDLAIDWPI-DPSRAIMSEKDHRHPTLKEFEAENPF 185
Query: 180 EY 181
Y
Sbjct: 186 VY 187
>gi|254172754|ref|ZP_04879428.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus sp. AM4]
gi|214032910|gb|EEB73738.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus sp. AM4]
Length = 185
Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++K + F D RG+F +TY + G++ FVQDNHS S G +RGLHFQR
Sbjct: 8 LEIPDVILIKPKVFGDERGFFMETYKKPDFESAGIKGEFVQDNHSRSRY-GVLRGLHFQR 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAK+VR + G I+D+AVD+R+NSPT+G WV + +S N Q+YIP GFAHGF+ L
Sbjct: 67 EPYAQAKIVRVVRGVIYDVAVDLRKNSPTFGKWVGVILSEFNKWQLYIPRGFAHGFLVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+VIYKV + Y+ +++ G+ W D +DI WP+ + P VSEKD+ LP L +
Sbjct: 127 DVADVIYKVDNVYAPDYEGGIIWNDPELDIDWPVDE---PIVSEKDRKLPTLREA 178
>gi|283852391|ref|ZP_06369661.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio sp. FW1012B]
gi|283572239|gb|EFC20229.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio sp. FW1012B]
Length = 185
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 114/179 (63%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++K R F D+RG+F +T+S K GL FVQDNH+ S G +RGLH+QRPP
Sbjct: 8 IPGLVVVKPRVFGDNRGFFLETHSRKAYAAAGLDYDFVQDNHARSGPRGVLRGLHYQRPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLV + G +FD+AVD+R SPTYG W +E++ +N L++ +P GFAHG++TL N
Sbjct: 68 NTQAKLVWVVRGAVFDVAVDLRVGSPTYGKWYGIELTEDNFLRLMVPRGFAHGYVTLTEN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E +YKV YS D+G+AW D I + WP+ +P +S+KD P L SPF Y
Sbjct: 128 AEFMYKVDAPYSPADDAGIAWNDPDIGVAWPVD---VPVLSDKDARQPTLAAGGSPFVY 183
>gi|58039513|ref|YP_191477.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconobacter oxydans 621H]
gi|58001927|gb|AAW60821.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconobacter oxydans 621H]
Length = 187
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 110/182 (60%), Gaps = 1/182 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++ +F D+RG+FS+TY+ + + E G+ FVQDN S S G +RGLH Q
Sbjct: 6 LSIPEVILVTPPRFGDNRGFFSETYNVERMGEAGIDLPFVQDNQSLSRQKGVVRGLHCQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PY Q KLVR G I+D+AVD R SPTYG WV+ E+SA N Q++IP GF HGF+TLE
Sbjct: 66 APYEQGKLVRVTRGAIWDVAVDARTGSPTYGKWVAAELSAENWSQLWIPPGFLHGFVTLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NTEV YK T YS + V W + I WP+ + +S+KD+ P + F
Sbjct: 126 ENTEVQYKCTSLYSKVSERAVIWNCPELKIDWPVSEADA-ILSDKDKVAPHFAEAKGWFS 184
Query: 181 YD 182
Y+
Sbjct: 185 YE 186
>gi|312898304|ref|ZP_07757694.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Megasphaera micronuciformis
F0359]
gi|310620223|gb|EFQ03793.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Megasphaera micronuciformis
F0359]
Length = 192
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + F D RG+F ++++ + ++ GL FVQDNHS S GT+RG+HFQ
Sbjct: 10 IPGLVIIEPQVFGDHRGFFMESWNKRTMETAGLFYNFVQDNHSSSTVKGTLRGIHFQYGD 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQAKLVRC+ G + D+AVD+R++SPTY W +E+S N Q IP GF HGF+TL +
Sbjct: 70 KAQAKLVRCVRGAVLDVAVDLRKDSPTYKQWYGIELSEENQKQFLIPRGFGHGFVTLTDH 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+YK ++Y+ + D G+ W D ++ I W + + P +SEKD PF +++++ +
Sbjct: 130 VGFMYKADNYYAPDADGGIRWNDPTLAINWGIEN---PILSEKDNKSPFFDELENKISF 185
>gi|317132491|ref|YP_004091805.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ethanoligenens harbinense
YUAN-3]
gi|315470470|gb|ADU27074.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ethanoligenens harbinense
YUAN-3]
Length = 185
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ R F D+RGWF +TYS + L LG+ FVQDN SFS GT+RGLHFQ
Sbjct: 7 ELDGVLIVEPRVFGDNRGWFMETYSKEKLAPLGVTVDFVQDNQSFSAQKGTLRGLHFQMH 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ+KL+RC G I D+AVDIR+ SP Y WV++E+SA N Q++IP GFAHGF+TL
Sbjct: 67 PKAQSKLLRCTHGAILDVAVDIRKGSPNYTKWVAVELSAENKRQLFIPAGFAHGFVTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ EV YKV ++Y+ + D + + D +I + W + P +S+KD P L D F Y
Sbjct: 127 DVEVQYKVDEYYAPDCDRSIRFDDPAIGVNWGIK---APILSKKDLGAPLLADSDCNFTY 183
>gi|184154573|ref|YP_001842913.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus fermentum IFO
3956]
gi|183225917|dbj|BAG26433.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus fermentum IFO
3956]
Length = 193
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++ F D RG+F++TYS + KE G+ FVQDN S S G +RGLHFQR
Sbjct: 10 KLQDVKLITPAVFGDHRGFFTETYSDRDFKEAGINFDFVQDNQSLSAQAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R+ SPTY W +SA+N Q+ +P GFAHGF+TL
Sbjct: 70 RAAQTKLIRVVTGAVLDVIVDLRKGSPTYKQWEGYILSASNHRQLLVPRGFAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y E D G++++ +DI WP+ D SEKD N P L + + +PF
Sbjct: 130 NVNFVYKCDNYYDAEADGGISFKTPELDIDWPI-DLDKAITSEKDANQPTLTEFEKDNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|295100096|emb|CBK89185.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium cylindroides
T2-87]
Length = 189
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 90/183 (49%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+ T F D RG+F++TYS ++G+ FVQDN SFS GT+RGLH+Q P
Sbjct: 7 KIPGVLIIDTDVFGDHRGYFTETYSKPKYGKMGITVDFVQDNMSFSSQKGTLRGLHWQNP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ+KLV C G++ D+AVDIR+ SPTYG WVS+E+SA N Q +IP GFAHGF+TL
Sbjct: 67 PYAQSKLVSCTKGKVIDVAVDIRKGSPTYGQWVSVELSAENHRQFFIPQGFAHGFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ E YKV + Y+ E + G+ + D ++++ W LL+ I P +SEKD+ P L + D+ F
Sbjct: 127 DVEFRYKVDNVYNKESEGGMRYDDPTVNVDWGQLLNGIEPVLSEKDKIGPTLEESDNQFV 186
Query: 181 YDG 183
Y+G
Sbjct: 187 YEG 189
>gi|167461465|ref|ZP_02326554.1| dTDP-dehydrorhamnose 3,5-epimerase [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381926|ref|ZP_08055879.1| heat-inducible transcription repressor-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321154127|gb|EFX46450.1| heat-inducible transcription repressor-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 185
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/171 (48%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V +L+ + DSRG+F ++++ K+ E GL +VQDNHS+S + GT+RGLH+Q P AQ
Sbjct: 11 VILLEPKVHGDSRGFFMESFNQKVFTENGLPVAYVQDNHSYSAEAGTLRGLHYQLSPKAQ 70
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
KLVR AG I+D+AVDIRR+SP++G W + +SA+N + +P G+AHGF TL +TEV
Sbjct: 71 TKLVRVTAGAIYDVAVDIRRDSPSFGHWTGIILSASNKRMLLVPQGYAHGFCTLVPHTEV 130
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+YKV + Y+ E D G+AW D S+ I WP+ D P +SEKD+ LP L +
Sbjct: 131 LYKVDELYNPELDRGIAWNDPSLGIDWPVAD---PVLSEKDRTLPLLEDAE 178
>gi|118588016|ref|ZP_01545426.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stappia aggregata IAM 12614]
gi|118439638|gb|EAV46269.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stappia aggregata IAM 12614]
Length = 192
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I VRIL ++ DSRG+FS+TY+ LL + G+ F+QDNH++S + GT+RGLH+Q
Sbjct: 7 LDIPEVRILCPKRHGDSRGFFSETYNKALLSDAGIDIDFIQDNHAYSAEKGTVRGLHYQM 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR + G I D+AVD+R SPTYG VS ISA NG QI +PTGFAHG +TLE
Sbjct: 67 PPFAQDKLVRVVRGAILDVAVDLRVGSPTYGQHVSSVISAENGKQILVPTGFAHGLVTLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TEV+YKV+ +Y+ EHD G+ W D + I W L + +S KD+ LP L ++ + F
Sbjct: 127 PHTEVLYKVSQYYAPEHDRGILWNDPELAIDWGLAEADA-VLSPKDRKLPRLAEVAACFS 185
Query: 181 Y 181
Y
Sbjct: 186 Y 186
>gi|118593889|ref|ZP_01551247.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stappia aggregata IAM 12614]
gi|118433510|gb|EAV40179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stappia aggregata IAM 12614]
Length = 188
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I VRIL ++ DSRG+FS+TY+ LL + G+ F+QDNH++S + GT+RGLH+Q
Sbjct: 7 LDIPEVRILCPKRHGDSRGFFSETYNKALLSDAGIDIDFIQDNHAYSAEKGTVRGLHYQM 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR + G I D+AVD+R SPTYG VS ISA NG QI +PTGFAHG +TLE
Sbjct: 67 PPFAQDKLVRVVRGAILDVAVDLRVGSPTYGQHVSSVISAENGKQILVPTGFAHGLVTLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TEV+YKV+ +Y+ EHD G+ W D + I W L + +S KD+ LP L ++ + F
Sbjct: 127 PHTEVLYKVSQYYAPEHDRGILWNDPELAIDWGLAEADA-VLSPKDRKLPRLAEVAACFS 185
Query: 181 Y 181
Y
Sbjct: 186 Y 186
>gi|297205907|ref|ZP_06923302.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus jensenii
JV-V16]
gi|297149033|gb|EFH29331.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus jensenii
JV-V16]
Length = 193
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 75/182 (41%), Positives = 109/182 (59%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N+ V+I+ F D RG+F++TYS + K G+ F+QDN S S G +RGLHFQR
Sbjct: 10 NLQDVKIITPAVFGDHRGFFTETYSDRDFKAAGINFNFIQDNQSLSTQAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R G + D+ VD+R+ SPTY W +S +N Q+ +P GFAHGF+TL
Sbjct: 70 KAAQTKLIRVATGAVLDVIVDLRKGSPTYKQWEGYILSESNHRQLLVPRGFAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y+ E D G++++ ++I WP+ D SEKD N P L + + +PF
Sbjct: 130 NVNFLYKCDNYYNAEADGGISFKTPELNIDWPI-DLDKAITSEKDANQPTLTEFEKDNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|169351599|ref|ZP_02868537.1| hypothetical protein CLOSPI_02379 [Clostridium spiroforme DSM 1552]
gi|169291821|gb|EDS73954.1| hypothetical protein CLOSPI_02379 [Clostridium spiroforme DSM 1552]
Length = 191
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 91/183 (49%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++T F D RG+F++TYS ++LG+ FVQDN SFS GT+RGLH+Q P
Sbjct: 7 EIPGVLIIETDVFGDHRGYFTETYSKPKYEKLGITVDFVQDNMSFSGQKGTLRGLHWQNP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ+KLV C G++ D+AVDIR+ SPTYG WVS+E+SA N Q +IP GFAHGF+TL
Sbjct: 67 PYAQSKLVSCTKGKVIDVAVDIRKGSPTYGKWVSVELSAENHRQFFIPQGFAHGFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITW-PLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ E YKV + Y+ E + G+ + D + ++ W LLD I P +SEKD P L + ++ F
Sbjct: 127 DVEFRYKVDNVYNKESEGGMRYDDPTCNVDWGKLLDGIEPVLSEKDMTGPTLEESNNQFV 186
Query: 181 YDG 183
Y+G
Sbjct: 187 YEG 189
>gi|227534051|ref|ZP_03964100.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227188323|gb|EEI68390.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 195
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ + E G+ + F QDN S S + G +RGLH+Q
Sbjct: 14 KLKDVKLVETDVFGDNRGFFTETYTREKFIEAGITNDFNQDNQSLSAEAGVLRGLHYQYG 73
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 74 KDAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSEFNHRQLLVPKGFAHGFITLTN 133
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N YKV +Y+ + D G+A+ D + I WP+ T +SEKD + P L D+ F Y
Sbjct: 134 NVNFCYKVEGYYAPDADRGIAFDDPDLGIDWPMS-TDHLIMSEKDLHHPQLKDADNNFVY 192
>gi|257867753|ref|ZP_05647406.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus casseliflavus
EC30]
gi|257874080|ref|ZP_05653733.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus casseliflavus
EC10]
gi|257801836|gb|EEV30739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus casseliflavus
EC30]
gi|257808244|gb|EEV37066.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus casseliflavus
EC10]
Length = 190
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ + D RG+F+++YS + G+ FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLTDVKLIEMDVYGDHRGFFTESYSKEKFSAQGIDFDFVQDNHSLSAEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VDIR+ SPTYG W ++ +N Q+ +P G+AHGFMTL
Sbjct: 67 EAAQTKLIRVVTGAVLDVIVDIRKGSPTYGEWEGYLLTEHNHRQLLVPRGYAHGFMTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N +YK ++Y+ E D G+A+ D + ITWP+ D +SEKD+ P L + ++ F
Sbjct: 127 NVNFLYKCDNYYNAEADGGIAFDDPDLAITWPI-DVKKAILSEKDKKHPTLKEFEIENTF 185
Query: 180 EY 181
Y
Sbjct: 186 IY 187
>gi|270339785|ref|ZP_06006012.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bergensis DSM
17361]
gi|270333816|gb|EFA44602.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bergensis DSM
17361]
Length = 211
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ + F+D RG+F ++++ K E FVQDN S S G +RGLHFQR
Sbjct: 29 SIEGVVIIEPKIFKDDRGYFYESWNQKEFDEKVRPIRFVQDNQSKSSY-GVLRGLHFQRG 87
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++Q+KLVR ++G + D+AVDIR+ SPT+G V++E++ +N Q +IP GFAHGF L
Sbjct: 88 THSQSKLVRVVSGSVLDVAVDIRKGSPTFGQHVAVELTGDNHRQFFIPRGFAHGFSVLSE 147
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK + Y E + +AW D ++ I W + + +SEKD P L + F+Y
Sbjct: 148 TAIFQYKCDNLYCKESEGAIAWNDPALGIDWRIPADKV-ILSEKDACHPLLEEATDLFDY 206
>gi|261409578|ref|YP_003245819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. Y412MC10]
gi|261286041|gb|ACX68012.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. Y412MC10]
Length = 182
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 116/180 (64%), Gaps = 3/180 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + +++ D+RG+F ++Y+ L ++ L F+QDN S S D G +RGLH+Q
Sbjct: 6 LKLLGASLIEPIVHNDNRGFFMESYNQHLFEQNQLDCSFIQDNQSLSKDAGVVRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R ++G I+D+ VDIR+NS TYG W+ + +S +N Q+ +P GFAHGF TL
Sbjct: 66 NPKAQTKLIRVLSGAIYDVIVDIRKNSATYGQWIGVILSEHNHRQLLVPKGFAHGFCTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TEV+YKV D+YS EHD G+ W D + I WP+ + P +SEKDQN P L + FE
Sbjct: 126 PDTEVLYKVDDYYSPEHDRGILWNDPELAIDWPMSN---PILSEKDQNHPLLKNAELNFE 182
>gi|154707208|ref|YP_001423502.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii Dugway
5J108-111]
gi|154356494|gb|ABS77956.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii Dugway
5J108-111]
Length = 189
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 79/183 (43%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M I V ++K + F D RG+F +T+ + G+ F+QDNHS S G +RGLH+Q
Sbjct: 8 MPIPEVILIKPKVFTDDRGFFIETFKQSDFRRHGINGEFLQDNHSLSMKKGVLRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR + G++FD+AVD+RR SPT+G WVS E+S+ N ++IP GFAHG + LE
Sbjct: 68 DPHAQGKLVRVVLGKVFDVAVDLRRESPTFGKWVSTELSSTNNHMLWIPPGFAHGMLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT ++YK T Y E + + W D I+I WP+ + + +SEKD FL + + +
Sbjct: 128 ENTHLLYKCTAEYVPESERYIRWDDPDINIKWPIKNNL--LLSEKDAAGVFLQRAEINAQ 185
Query: 181 YDG 183
Y G
Sbjct: 186 YHG 188
>gi|114571007|ref|YP_757687.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Maricaulis maris MCS10]
gi|114341469|gb|ABI66749.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Maricaulis maris MCS10]
Length = 188
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 85/181 (46%), Positives = 112/181 (61%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++ R+FED RG+FS+TY+ + E G+ FVQDNHS S GT+RGLH+Q
Sbjct: 6 LDIPDVIVVTPRRFEDDRGYFSETYNETVFAEAGIGARFVQDNHSCSLQAGTVRGLHYQS 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR +G I D+ VD+RR SP +G V EISA G QI++P GF HGF+TL+
Sbjct: 66 LPHAQGKLVRVTSGAIIDVVVDVRRGSPHFGQHVKAEISAEKGSQIWVPAGFLHGFITLQ 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT V YKVTDFY D V W D ++ I W + +S+KD + SPF
Sbjct: 126 PNTHVTYKVTDFYDAGCDGSVLWSDPALGIDWGI-GQSDAILSDKDAEAQSWQEFSSPFL 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|224369618|ref|YP_002603782.1| RfbC1 [Desulfobacterium autotrophicum HRM2]
gi|223692335|gb|ACN15618.1| RfbC1 [Desulfobacterium autotrophicum HRM2]
Length = 182
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++ + F D RG+F +T+ KE FVQDNHS S +RGLH+Q
Sbjct: 6 LSIPEVVLITPQVFGDHRGFFMETFRDDEFKENVAHATFVQDNHSKSTQ-NILRGLHYQI 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+ Q KLVR I+G +FD+AVDIR++SP +G W +SA N ++IP GFAHGF L
Sbjct: 65 -KHPQGKLVRVISGEVFDVAVDIRKSSPFFGRWSGATLSAENKNMLWIPPGFAHGFYVLS 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E YK TD+Y+ EH+ + W D SI I WP++ +P +S+KD+ +
Sbjct: 124 NEAEFTYKCTDYYAPEHERSIRWDDPSIAIDWPIIHGTVPILSQKDKEGSTFGDAE 179
>gi|110635095|ref|YP_675303.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mesorhizobium sp. BNC1]
gi|110286079|gb|ABG64138.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chelativorans sp. BNC1]
Length = 189
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 124/181 (68%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M + V+ + KF D RG+FS+TY++K E G+ FVQDNHS S GT+RGLHFQ+
Sbjct: 7 MELEGVQEILPEKFSDERGFFSETYNAKAFAEAGIAVEFVQDNHSLSSVPGTVRGLHFQK 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR + G I D+AVDIR SPT+G WV +E+S+ Q++IP G+AHGFMTLE
Sbjct: 67 PPFAQDKLVRVVRGAILDVAVDIRAGSPTFGRWVGVELSSRKWNQLFIPKGYAHGFMTLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TEV+YKV+ FYS EHD + + D +I I WP I P +S KD+ P L ++++ F
Sbjct: 127 PDTEVVYKVSAFYSREHDQAIRFDDPAIGIAWP--KEIKPLLSGKDRAAPDLAEVETGFR 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|254556200|ref|YP_003062617.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus plantarum JDM1]
gi|254045127|gb|ACT61920.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus plantarum JDM1]
Length = 193
Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F++TYS + KE G+ F+QDN S S + G +RGLHFQR
Sbjct: 10 KLQDVKIIEPAVFGDKRGFFTETYSDRDFKEAGIDFDFIQDNQSLSAEAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R SPTYG W IS +N Q+ +P GFAHGF+TL
Sbjct: 70 KAAQTKLIRVVTGAVLDVIVDVRAGSPTYGEWEGYIISESNHRQLLVPRGFAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y+ E D G+ + DK ++I WP+ D SEKD + + +PF
Sbjct: 130 NVNFLYKCDNYYNAEADGGITFMDKDLNINWPI-DYDQAITSEKDAKQQTFKEFEQNNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|16357460|gb|AAL18012.1| dTDP-dehydrorhamnose 3,5-epimerase [Aneurinibacillus
thermoaerophilus]
Length = 182
Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
V +L+ + F D RG+F ++Y+ +L+ LG+ FVQDN S S + G +RGLH+Q
Sbjct: 7 KFQDVVLLEPKVFGDGRGFFMESYNKAVLEVLGIHIDFVQDNQSLSREAGVLRGLHYQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR + G I+D+ VDIR+NSPT+G W + +S N Q+ +P GFAHGF TL
Sbjct: 67 PKAQTKLVRVLTGAIYDVVVDIRKNSPTFGQWEAFILSEENKRQLLVPKGFAHGFCTLVP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT+V YKV ++YS EHD G+AW D +++I WP + P +SEKD+ P L + + FE
Sbjct: 127 NTQVFYKVDEYYSPEHDRGIAWDDAALNIPWPTSE---PILSEKDKCHPVLAEAEINFE 182
>gi|212211866|ref|YP_002302802.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii CbuG_Q212]
gi|212010276|gb|ACJ17657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii CbuG_Q212]
Length = 189
Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M I V ++K + F D RG+F +T+ + G+ F+QDNHS S G +RGLH+Q
Sbjct: 8 MPIPEVILIKPKVFTDDRGFFIETFKQSDFRRHGINGEFLQDNHSLSMKKGVLRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR + G++FD+AVD+RR SPT+G WVS E+ + N ++IP GFAHG + LE
Sbjct: 68 DPHAQGKLVRVVLGKVFDVAVDLRRESPTFGKWVSTELCSTNNHMLWIPPGFAHGILVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT ++YK T Y E + + W D I+I WP+ + + +SEKD FL + + +
Sbjct: 128 ENTHLLYKCTAEYVPESERYIRWDDPDINIKWPIKNNL--LLSEKDAAGVFLQRAEINAQ 185
Query: 181 YDG 183
Y G
Sbjct: 186 YHG 188
>gi|254993500|ref|ZP_05275690.1| hypothetical protein LmonocytoFSL_11287 [Listeria monocytogenes FSL
J2-064]
Length = 187
Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K E G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHEAGIDMKFIQDNHSLSVEAGVLRGMHYQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+R G I+D+ VD+R+ SPTYG W +S N Q+ +P GFAHGF T+
Sbjct: 67 PKAQTKLIRVATGAIYDVVVDMRKGSPTYGEWEGYILSEANKHQLLVPQGFAHGFCTITE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
N V+YKV YS E+D+G+A+ D ++ITWP +S+KD P L +
Sbjct: 127 NVNVLYKVDQLYSPENDAGIAYDDPDLNITWPTDK---LILSDKDTKHPRLKXLK 178
>gi|218280966|ref|ZP_03487556.1| hypothetical protein EUBIFOR_00114 [Eubacterium biforme DSM 3989]
gi|218217737|gb|EEC91275.1| hypothetical protein EUBIFOR_00114 [Eubacterium biforme DSM 3989]
Length = 190
Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats.
Identities = 88/183 (48%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+ T F D RG+F++TYS +++G+ FVQDN SFS GT+RGLH+Q P
Sbjct: 7 KIPGVLIIDTDVFGDHRGYFTETYSKPKYEKMGITVDFVQDNMSFSAQKGTLRGLHWQNP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ+KLV C G + D+AVDIR+ SPT+G WVS+E+S N Q +IP GFAHGF+TL
Sbjct: 67 PYAQSKLVSCTKGTVIDVAVDIRKGSPTFGQWVSVELSEENHRQFFIPQGFAHGFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ E YKV + Y+ E + G+ + D + ++ W LL+ I P +SEKDQ P L + ++ F
Sbjct: 127 DVEFRYKVDNVYNKESEGGMRYDDPTCNVDWGSLLNGIEPVLSEKDQVGPTLEESNNQFV 186
Query: 181 YDG 183
Y+G
Sbjct: 187 YEG 189
>gi|294675734|ref|YP_003576349.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter capsulatus SB
1003]
gi|294474554|gb|ADE83942.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter capsulatus SB
1003]
Length = 187
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 90/181 (49%), Positives = 118/181 (65%), Gaps = 1/181 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+++ R+F D RG+FS++YS+K L E G+ VFVQDNHS S GTIRGLHFQ PP
Sbjct: 8 LAGVKLITPRRFGDHRGFFSESYSAKALAEHGIDTVFVQDNHSLSMTVGTIRGLHFQNPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC G +FD+AVDIR+ SPTYG W E+S NG Q+ +P GFAHGF+T
Sbjct: 68 HAQDKLVRCGKGCLFDVAVDIRKGSPTYGQWFGAELSFENGRQLLVPKGFAHGFVTRAPE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TE+IYK +D+Y E + + W D I I W + D + P +S KD + DS F +
Sbjct: 128 TEIIYKCSDYYHPETEGALIWNDPDIGIDWGMGD-LEPVLSAKDAVAGRIADFDSAFSWQ 186
Query: 183 G 183
G
Sbjct: 187 G 187
>gi|153010045|ref|YP_001371260.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum anthropi ATCC
49188]
gi|151561933|gb|ABS15431.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum anthropi ATCC
49188]
Length = 183
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V + RKF D RG+FS+TY++K E G+ FVQDNHS+S G +RGLH+Q
Sbjct: 6 LGLDGVFEVSPRKFGDDRGFFSETYNAKSFAEAGIDLTFVQDNHSYSAAKGVVRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR G I D+AVDIR++SPT+G WV+LE+SA QI +P GFAHGFMTL
Sbjct: 66 LPFAQDKLVRVTRGAILDVAVDIRKSSPTFGKWVALEVSAEKWNQILVPKGFAHGFMTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
NTEVIYKVTD+YS EHD + + D +I I WP+ + + +S+KD P L +
Sbjct: 126 ENTEVIYKVTDYYSPEHDRSIRFDDSAIGIDWPIASSGV-QLSDKDSKAPLLADAE 180
>gi|262383284|ref|ZP_06076420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_33B]
gi|262294182|gb|EEY82114.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_33B]
Length = 185
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 71/179 (39%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + +D+RG+F + + +E + FVQDN S S G +RGLH+Q P
Sbjct: 8 IPGVWIIEPKVLKDARGYFMEAFKQAEFEEHIGKIEFVQDNESCSSK-GVLRGLHYQLAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q+KLVR I GR+ D+AVD+R SPT+G +V++E+S N Q++IP GFAHGF L
Sbjct: 67 YSQSKLVRVIKGRVLDVAVDVREGSPTFGKYVAVELSDENKRQLFIPQGFAHGFHVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YKV + Y+ H+ G+ + D ++ + W + D ++SEKD P L + F+Y
Sbjct: 127 AIFTYKVDNPYAPTHERGIRYDDPTVHVDWGITDPESINLSEKDTKAPSLKDAELNFKY 185
>gi|90962542|ref|YP_536458.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus salivarius
UCC118]
gi|90821736|gb|ABE00375.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus salivarius
UCC118]
Length = 193
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++ F D+RG+F+++YS + K G+ F+QDNHS S G +RGLHFQR
Sbjct: 10 KLQDVKLITPAVFGDNRGFFTESYSDRDFKAAGIDFDFIQDNHSLSTQAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R G + D+ VD+R+ SPTY W +S +N Q+ +P G+AHGF+TL
Sbjct: 70 KAAQTKLIRVATGAVLDVIVDLRKGSPTYKQWEGYILSESNHRQLLVPKGYAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y E D G++++ ++I WP+ D SEKD N P L + + +PF
Sbjct: 130 NVNFLYKCDNYYDAEADGGISFKTPELNIDWPI-DLDKAITSEKDANQPTLTEFEKGNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|310829413|ref|YP_003961770.1| dTDP-4-dehydrorhamnose 3 [Eubacterium limosum KIST612]
gi|308741147|gb|ADO38807.1| dTDP-4-dehydrorhamnose 3 [Eubacterium limosum KIST612]
Length = 186
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 78/179 (43%), Positives = 108/179 (60%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ F D RG+F +TY+ + ++ GL F+QDN S S G +RGLHFQ
Sbjct: 11 IEGLVIVQPSVFGDERGYFMETYNKEEFEKQGLNMTFIQDNESKSKK-GVLRGLHFQ-RK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q KLVRC G ++D+ VD+R+ SPTYG W +E+SA N YIP GFAHGF+ L
Sbjct: 69 YSQGKLVRCTQGAVWDVGVDLRKGSPTYGEWAGVELSAENKTMFYIPEGFAHGFVVLSDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK T+ Y+ E+D G+ W D I + WP+ + + +SEKDQ PFL I E+
Sbjct: 129 ATFNYKCTNLYAPEYDGGIRWNDPEIGVEWPV-EGLELLLSEKDQKQPFLKDIKDTLEF 186
>gi|332295247|ref|YP_004437170.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermodesulfobium narugense
DSM 14796]
gi|332178350|gb|AEE14039.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermodesulfobium narugense
DSM 14796]
Length = 188
Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 4/182 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I+K + F D RG+F +TY + + G+ FVQDNHS S G +RGLH+Q
Sbjct: 9 DIPEVMIVKPKVFGDERGFFLETYKREDFVKAGIYKEFVQDNHSKS-VKGVLRGLHYQLN 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRCI G+IFD+AVDIR+NSPT+ +VS+E+S N +++P GFAHGF+TL
Sbjct: 68 PKAQGKLVRCIKGKIFDVAVDIRKNSPTFLKYVSVELSEENKFMLWVPEGFAHGFLTLSD 127
Query: 122 NTEVIYKVTDF-YSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E++YKV+ YS EHD + W D I I WPL P +S+KD++ P L D F
Sbjct: 128 EAEIMYKVSGSTYSPEHDRSLRWNDPEIGINWPLEGE--PILSKKDKDAPLLKNADINFV 185
Query: 181 YD 182
Y+
Sbjct: 186 YE 187
>gi|313159056|gb|EFR58431.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alistipes sp. HGB5]
Length = 191
Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V IL+ F D+RG+F ++YS + FVQDN S S G +RGLHFQ+
Sbjct: 8 IEGVVILEPEVFGDARGYFFESYSQRRFDAEVRPVRFVQDNESHSRY-GVLRGLHFQKGR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q+KLVR + GR+ D+AVDIRR SPT+G V++E++ +N Q +IP GFAHGF L
Sbjct: 67 YSQSKLVRVVRGRVLDVAVDIRRGSPTFGRHVAVELTEDNKRQFFIPRGFAHGFAVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK + YS E + +AW D S+ I W L + +S KD P L++ F+Y+
Sbjct: 127 ATFQYKCDNPYSPESEGAIAWNDPSLGIDWRLAPEDV-ILSPKDSAHPLLSEAGELFDYN 185
>gi|165918222|ref|ZP_02218308.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii RSA 334]
gi|165918082|gb|EDR36686.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii RSA 334]
Length = 189
Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats.
Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M I V ++K + F D RG+F +T+ + G+ F+QDNHS S G +RGLH+Q
Sbjct: 8 MPIPEVILIKPKVFTDDRGFFIETFKQSDFRRHGINGEFLQDNHSLSMKKGVLRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR + G++FD+AVD+RR SPT+G WVS E+S+ N ++IP GFAHG + LE
Sbjct: 68 DPHAQGKLVRVVLGKVFDVAVDLRRESPTFGKWVSTELSSTNNHMLWIPPGFAHGMLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT ++YK T Y + + W D I+I WP+ + + +SEKD FL + + +
Sbjct: 128 ENTHLLYKCTAEYVPASERYIRWDDPDINIKWPIKNNL--LLSEKDAAGVFLQRAEINAQ 185
Query: 181 YDG 183
Y G
Sbjct: 186 YHG 188
>gi|217978847|ref|YP_002362994.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylocella silvestris BL2]
gi|217504223|gb|ACK51632.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylocella silvestris BL2]
Length = 190
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 89/185 (48%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +LK R+F D RG+F +TY+ + + G+ FVQDN SFS GTIRGLHFQ P
Sbjct: 7 DLPGVLVLKPRRFADQRGYFVETYNRRTFAKAGVDAQFVQDNQSFSAKAGTIRGLHFQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLVR + G IFD+AVD+R SPT+G W+ ++A G Q+ IP GFAH F TLE
Sbjct: 67 PAAQAKLVRAVRGAIFDVAVDLRAGSPTFGRWIGETLTAGGGEQLLIPRGFAHAFCTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ EV YKV DFY+ DSG+ W D + I WP+ + +S+KD L SPF +
Sbjct: 127 DVEVAYKVDDFYAPTCDSGLIWNDPDLKIEWPV-EASAAVLSDKDAKLGRFADFVSPFRF 185
Query: 182 D-GLP 185
+ G P
Sbjct: 186 EAGAP 190
>gi|29655125|ref|NP_820817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii RSA 493]
gi|161830572|ref|YP_001597662.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii RSA 331]
gi|29542394|gb|AAO91331.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii RSA 493]
gi|161762439|gb|ABX78081.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii RSA 331]
Length = 189
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 113/181 (62%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V ++K + F D RG+F +T+ + G+ F+QDNHS S G +RGLH+Q P
Sbjct: 10 IPEVILIKPKVFTDDRGFFIETFKQSDFRRHGINGEFLQDNHSLSMKKGVLRGLHYQLDP 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR + G++FD+AVD+RR SPT+G WVS E+S+ N ++IP GFAHG + LE N
Sbjct: 70 HAQGKLVRVVLGKVFDVAVDLRRESPTFGKWVSTELSSTNNHMLWIPPGFAHGMLVLEEN 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
T ++YK T Y E + + W D I+I WP+ + + +SEKD FL + + +Y
Sbjct: 130 THLLYKCTAEYVPESERYIRWDDPDINIKWPIKNNL--LLSEKDAAGVFLQRAEINAQYH 187
Query: 183 G 183
G
Sbjct: 188 G 188
>gi|301067029|ref|YP_003789052.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme [Lactobacillus
casei str. Zhang]
gi|300439436|gb|ADK19202.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Lactobacillus
casei str. Zhang]
Length = 190
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ G+ + F QDN S S + G +RG+H+Q
Sbjct: 9 KLQDVKLVETDVFGDNRGFFTETYTRDKFLAAGITNDFNQDNQSLSAEAGVLRGMHYQMA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+++P GFAHGF+TL
Sbjct: 69 PDAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSEFNHRQLFVPKGFAHGFITLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N YKV FY+ + D G+A+ D I I WP+ T +S+KD+ P L ++ F Y
Sbjct: 129 NVNFCYKVEGFYAPQSDRGIAFDDPDIGIQWPMS-TDHLIMSDKDKKHPQLKDAENNFVY 187
>gi|218259907|ref|ZP_03475432.1| hypothetical protein PRABACTJOHN_01093 [Parabacteroides johnsonii
DSM 18315]
gi|218224852|gb|EEC97502.1| hypothetical protein PRABACTJOHN_01093 [Parabacteroides johnsonii
DSM 18315]
Length = 185
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 111/180 (61%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F+D+RG+F + + +E + FVQDN S S G +RGLH+Q
Sbjct: 7 EIPGVWIIEPKVFKDARGYFMEAWKKAEFEEHIGKVEFVQDNESCSSK-GVLRGLHYQLA 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+Q+KLVR I G + D+AVD+R+ SPT+G +V++E+S N Q +IP GFAHGF L
Sbjct: 66 PYSQSKLVRVIKGCVLDVAVDLRKGSPTFGKYVAVELSDENKRQFFIPQGFAHGFHVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YKV + Y+ H+ G+ + D + + W ++D + ++S+KD+N P L + F+Y
Sbjct: 126 EAVFTYKVDNPYTPTHERGLRFDDPVVGVDWKIMDLSILNLSDKDRNAPLLQDAEINFKY 185
>gi|158423458|ref|YP_001524750.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Azorhizobium caulinodans ORS
571]
gi|158330347|dbj|BAF87832.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Azorhizobium caulinodans ORS
571]
Length = 185
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 114/181 (62%), Gaps = 3/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++ +F D RG+FS+TY L GL VF+QDN S S G IRGLHFQ
Sbjct: 7 LDIPEVVLITPPRFADPRGYFSETYKKSALDAAGLNHVFIQDNESLSTVPGIIRGLHFQA 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP++QAKLVR ++G I+D+AVDIR+ SPTYG WV ++A G QI IP GFAH F TL
Sbjct: 67 PPFSQAKLVRVVSGAIYDVAVDIRKGSPTYGKWVGATLTAEKGEQILIPHGFAHAFCTLT 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ V+YKV YS + G+ W D + I WP+ + VSEKD+ LP +DSPF
Sbjct: 127 PDVRVLYKVDGAYSKASEGGIIWNDPDLAIDWPVSN---ALVSEKDEILPRFKDLDSPFI 183
Query: 181 Y 181
Y
Sbjct: 184 Y 184
>gi|116495477|ref|YP_807211.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Lactobacillus
casei ATCC 334]
gi|191638940|ref|YP_001988106.1| RmlC [Lactobacillus casei BL23]
gi|191638981|ref|YP_001988147.1| RmlC [Lactobacillus casei BL23]
gi|116105627|gb|ABJ70769.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus casei ATCC 334]
gi|190713242|emb|CAQ67248.1| RmlC [Lactobacillus casei BL23]
gi|190713283|emb|CAQ67289.1| RmlC [Lactobacillus casei BL23]
gi|215272230|dbj|BAG84629.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus casei]
gi|327382988|gb|AEA54464.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus casei LC2W]
gi|327383034|gb|AEA54510.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus casei LC2W]
gi|327386176|gb|AEA57650.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus casei BD-II]
gi|327386221|gb|AEA57695.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus casei BD-II]
Length = 190
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++T F D+RG+F++TY+ G+ + F QDN S S + G +RG+H+Q
Sbjct: 9 KLQDVKLVETDVFGDNRGFFTETYTRDKFVAAGITNDFNQDNQSLSAEAGVLRGMHYQMA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+++P GFAHGF+TL
Sbjct: 69 PDAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSEFNHRQLFVPKGFAHGFITLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N YKV FY+ + D G+A+ D I I WP+ T +S+KD+ P L ++ F Y
Sbjct: 129 NVNFCYKVEGFYAPQSDRGIAFDDPDIGIQWPMS-TDHLIMSDKDKKHPQLKDAENNFVY 187
>gi|194466300|ref|ZP_03072287.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri 100-23]
gi|194453336|gb|EDX42233.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri 100-23]
Length = 193
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 74/182 (40%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I+ F D RG+F +TYS + K G+ FVQDN S S G +RGLHFQR
Sbjct: 10 KLQDVKIITPAVFGDHRGFFEETYSDRDFKAAGIDFDFVQDNQSLSTQAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R+ SPTY W +SA+N Q+ +P GFAHGF+TL
Sbjct: 70 KAAQTKLIRVVTGAVLDVIVDLRKGSPTYKQWEGYILSASNHRQLLVPRGFAHGFLTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y E D G++++ ++I WP+ SEKD P L + + +PF
Sbjct: 130 NVNFVYKCDNYYDAEADGGISFKTPELNIDWPIEFDKA-ITSEKDAAQPTLTEFEKDNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|254430167|ref|ZP_05043870.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanobium sp. PCC 7001]
gi|197624620|gb|EDY37179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanobium sp. PCC 7001]
Length = 191
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 79/176 (44%), Positives = 106/176 (60%), Gaps = 3/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +L R F D RG+F ++++ FVQDNHS S G +RGLH+Q PP
Sbjct: 14 LEGVLLLTPRVFGDDRGFFFESWNQNAFNAAAGPTAFVQDNHSRSVQ-GVLRGLHYQLPP 72
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVRC+ G IFD+AVDIR +SPT+G W + +SA N Q+++P G+AHGF+TL
Sbjct: 73 HPQGKLVRCLVGEIFDVAVDIRPSSPTFGQWGGVRLSAANKQQLWVPAGYAHGFLTLSPE 132
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQID 176
EV+YK TDF+S E + G+ W D I I WP P +S KD P L + D
Sbjct: 133 AEVLYKTTDFWSKECERGIRWDDPQIGIAWPQEGLPDGQPLLSAKDAVAPALAEAD 188
>gi|114321467|ref|YP_743150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227861|gb|ABI57660.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 182
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V ++K F D RG+F +T+ + E G+ FVQDNHS S GT+RGLH+Q
Sbjct: 8 IPDVILVKPDVFGDERGFFMETWQRRKFAEGGIDHDFVQDNHSRSVK-GTLRGLHYQIRQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR AG +FD+AVD+RR SPT+G W +SA+N +++P GFAHGF
Sbjct: 67 -PQGKLVRVTAGSVFDVAVDLRRGSPTFGQWAGEHLSADNHHMLWVPPGFAHGFYVTSET 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK +D+Y+ EH+ + W D + I WPL D P VSEKD+ Q +
Sbjct: 126 ADFQYKCSDYYAPEHEHCIRWDDPELGIDWPLSDNGAPLVSEKDRQGLAFAQAE 179
>gi|197106802|ref|YP_002132179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phenylobacterium zucineum
HLK1]
gi|196480222|gb|ACG79750.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phenylobacterium zucineum
HLK1]
Length = 184
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 113/175 (64%), Gaps = 2/175 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V ++ ++ D+RGWFS+T+S + + E G++ FVQDN +F+ GT+RGLHFQ
Sbjct: 7 LALSDVLLITPKRHGDARGWFSETWSRRAMSEAGVEADFVQDNQAFNARKGTLRGLHFQA 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ Q KLVR + G I+D+AVDIR S TYG WV ++A G Q+++P GFAHG+ TL
Sbjct: 67 APHPQGKLVRVLQGAIYDVAVDIRPGSATYGRWVGATLTAEGGEQLWVPRGFAHGYCTLT 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + YKV Y+ + + GVAW D + I WPL P +SEKD+ LP L +
Sbjct: 127 DDAMLFYKVDGLYAPQTEGGVAWDDPDLAIDWPL--ESEPVLSEKDKTLPRLKDL 179
>gi|312115798|ref|YP_004013394.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodomicrobium vannielii ATCC
17100]
gi|311220927|gb|ADP72295.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodomicrobium vannielii ATCC
17100]
Length = 196
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V +++ R+FED RGWFS+TY+ + ++ GL+ FVQDNHS S + T+RGLHFQRPP+A
Sbjct: 4 EVLLIRPRRFEDDRGWFSETYNERNFRQAGLESRFVQDNHSLSREKYTLRGLHFQRPPFA 63
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q+KLVRC GRIFD+ VDIR SP++G W+S E+SA G Q+++P GF HGF+TL +TE
Sbjct: 64 QSKLVRCSKGRIFDVTVDIRIGSPSFGGWISTELSAEGGEQLFVPAGFLHGFLTLTPDTE 123
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD-- 182
+IYKV+DFY D+GV W D I + W L + + P++S KD+ LP L IDSPF +
Sbjct: 124 IIYKVSDFYDGASDAGVRWDDPMIAVNWSLPEGVPPTLSAKDRALPLLAAIDSPFMFQPG 183
Query: 183 GLPLLSLNME 192
+PL E
Sbjct: 184 DVPLTEAPRE 193
>gi|312136509|ref|YP_004003846.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Methanothermus fervidus DSM
2088]
gi|311224228|gb|ADP77084.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanothermus fervidus DSM
2088]
Length = 185
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + ++K + FED RG+F +TY++K K+ + FVQDN SFS G +RGLHFQ
Sbjct: 10 SIPGLYVIKPKVFEDERGYFMETYNAKEFKKANINAKFVQDNQSFSKK-GVLRGLHFQYR 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G+IFD+AVD+R+NS TYG W S+ +S N YIP GFAHGF+ L
Sbjct: 69 RQ-QGKLVRVIKGKIFDVAVDLRKNSETYGEWESVILSGKNKKMFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V YK TDFY E++ G+ W D I I WP+ + +S+KD+ L +
Sbjct: 128 TAIVTYKCTDFYYPEYEGGIIWNDPDIGIEWPIDEVDKLIISDKDKKWKPLKE 180
>gi|108759544|ref|YP_632778.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Myxococcus xanthus DK 1622]
gi|108463424|gb|ABF88609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Myxococcus xanthus DK 1622]
Length = 183
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 5/183 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +L+ + F D RG+F + + + +G+ FVQDN+S S GT+RG+HFQ
Sbjct: 6 LEIPDVLLLEPKVFGDDRGFFMEMFHAARYAAVGIPGPFVQDNYSRS-AKGTLRGVHFQ- 63
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KLV+ +AG ++D+AVD+RR SPT+G WV++E+S++N Q++IP GFAHGF +
Sbjct: 64 EPQAQGKLVQVLAGAVYDVAVDVRRGSPTFGQWVAVELSSDNRRQLWIPPGFAHGFCVVS 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ + YK T Y+ E + V W D + I WP+ + P +S KD P L E
Sbjct: 124 DSADFHYKCTALYAPETERSVVWNDPDLAIPWPVSE---PLLSPKDAQAPRLRDAPLLPE 180
Query: 181 YDG 183
Y G
Sbjct: 181 YVG 183
>gi|261415186|ref|YP_003248869.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261371642|gb|ACX74387.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302326605|gb|ADL25806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 187
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 81/179 (45%), Positives = 108/179 (60%), Gaps = 2/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ F D+RG+F +TYS + E G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGVKIIEPTVFGDARGYFMETYSKRDFAEGGIDVDFVQDNESRSRK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G +FD+AVD+R+NS T+G WV + +SA N Q YIP GFAHGF+ L
Sbjct: 68 QNPQGKLVRVIEGEVFDVAVDLRKNSKTFGKWVGVTLSAENKKQFYIPEGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+YK T FY+ + G+ W D +I I WP+ + P +SEKD P L +D F+
Sbjct: 128 TAAFVYKCTRFYAPNDEGGLFWNDPAIGIKWPVGEGFEPLLSEKDTKNPLLKDLDFAFD 186
>gi|300022034|ref|YP_003754645.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299523855|gb|ADJ22324.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 183
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I ++++ +FED RG+FS+TYS K LKE G+ FVQDN S S GTIRGLHFQ+
Sbjct: 6 LEIPGLKLIVPPRFEDERGFFSETYSEKALKEAGIPAPFVQDNFSLSARKGTIRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAKLVR GR+ D+AVDIR +SPTYG V++E+S N Q+YIP GFAHGF TLE
Sbjct: 66 APYAQAKLVRVNRGRVLDVAVDIRSSSPTYGKHVAIELSRENWAQLYIPAGFAHGFCTLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEV YK + Y+ E + G+ W D ++ I WP+ + + +VS+KD LP + F
Sbjct: 126 DDTEVAYKTSAPYAPEAEGGILWSDPTLAIAWPVAPSDV-TVSDKDARLPSFANMAIAF 183
>gi|227891399|ref|ZP_04009204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus salivarius ATCC
11741]
gi|301299657|ref|ZP_07205914.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|227866788|gb|EEJ74209.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus salivarius ATCC
11741]
gi|300215157|gb|ADJ79573.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus salivarius CECT
5713]
gi|300852751|gb|EFK80378.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 193
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++ F D+RG+F+++YS + K G+ F+QDNHS S G +RGLHFQR
Sbjct: 10 KLQDVKLITPAVFGDNRGFFTESYSDRDFKAAGIDFDFIQDNHSLSTQAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R G + D+ VD+R+ SPTY W +S +N Q+ +P G+AHGF+TL
Sbjct: 70 KAAQTKLIRVATGAVLDVIVDLRKGSPTYKQWEGYILSESNHRQLLVPKGYAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y E D G++++ ++I WP+ D SEKD N P L + + +PF
Sbjct: 130 NVNFLYKCDNYYDAEADGGISFKTPELNIDWPI-DLDKAITSEKDANQPTLTEFEKDNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|258543636|ref|YP_003189069.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-01]
gi|256634714|dbj|BAI00690.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-01]
gi|256637770|dbj|BAI03739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-03]
gi|256640824|dbj|BAI06786.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-07]
gi|256643879|dbj|BAI09834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-22]
gi|256646934|dbj|BAI12882.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-26]
gi|256649987|dbj|BAI15928.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-32]
gi|256652977|dbj|BAI18911.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656031|dbj|BAI21958.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pasteurianus IFO
3283-12]
Length = 190
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 82/183 (44%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ +F D+RG+FS+TY+ + ++E G+ + FVQDN S S G IRGLH Q
Sbjct: 6 LAIPDVILITPPRFGDNRGFFSETYNIERMREAGITEPFVQDNQSLSRQKGVIRGLHCQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC G I+D+AVD R SPTYG WV+ E+S N Q++IP GF HGF TL
Sbjct: 66 DPFAQGKLVRCTRGAIWDVAVDARTGSPTYGKWVAAELSEENWSQLWIPPGFLHGFCTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
N EV YK T YS + V W + I WP+ +SEKD P + F+
Sbjct: 126 ENAEVQYKCTALYSKASERAVIWNSAELGIDWPVK-AEDAVLSEKDLLAPEFSAAKGWFQ 184
Query: 181 YDG 183
Y G
Sbjct: 185 YVG 187
>gi|300768302|ref|ZP_07078206.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|300494090|gb|EFK29254.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
Length = 193
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F++TYS + KE G+ F+QDN S S + G +RGLHFQR
Sbjct: 10 KLQDVKIIEPAVFGDKRGFFTETYSDRDFKEAGIDFDFIQDNQSLSAEAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R SPTYG W IS +N Q+ +P GFAHGF+TL
Sbjct: 70 KAAQTKLIRVVTGAVLDVIVDVRAGSPTYGEWEGYIISESNHRQLLVPRGFAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y+ E D G+ + DK ++I WP+ D SEKD + + +PF
Sbjct: 130 NVNFLYKCDNYYNAEADGGITFMDKDLNINWPI-DYDQAITSEKDAKQQTFKEFEQNNPF 188
Query: 180 EY 181
Y
Sbjct: 189 AY 190
>gi|159896798|ref|YP_001543045.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Herpetosiphon aurantiacus
ATCC 23779]
gi|159889837|gb|ABX02917.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Herpetosiphon aurantiacus
ATCC 23779]
Length = 188
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/183 (45%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I+K F D RG+F +TY +LGL FVQDNHS S G +RGLH+Q
Sbjct: 10 LDGVVIIKPSVFADERGFFLETYHQIKFADLGLPTDFVQDNHSRSKQ-GVLRGLHYQDER 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AKLVRC G IFD+AVD+R SPT+G WV +E+SA+N LQ IP+GF HGF+ L
Sbjct: 69 QPMAKLVRCSVGSIFDVAVDLRVGSPTFGKWVGVELSADNFLQFLIPSGFGHGFVVLSEF 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ-IDSP-FE 180
EV Y+ T Y+ E + V W D I I WP+ + P++S +DQ L +++P F
Sbjct: 129 AEVQYRCTGLYAPETEGAVRWNDPQIGIEWPISE---PTLSGRDQAAMSLADYLENPAFR 185
Query: 181 YDG 183
Y G
Sbjct: 186 YRG 188
>gi|291562823|emb|CBL41639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [butyrate-producing bacterium
SS3/4]
Length = 191
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 110/180 (61%), Gaps = 5/180 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ F D RG+F +TY+ KE GL VFVQDN S S G +RGLHFQ
Sbjct: 16 IEGLHVIEPTVFNDERGYFMETYNQNDFKEAGLNMVFVQDNQSMSVK-GVLRGLHFQ-KQ 73
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +S TYG W +E+SA N Q YIP GFAHGF+ L
Sbjct: 74 FPQGKLVRAVRGTVFDVAVDLRTHSKTYGKWFGVELSAENKKQFYIPEGFAHGFVVLSDE 133
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E YK TDFY + G+AW D++I + WP+ + +SEKDQ P +I F++D
Sbjct: 134 AEFAYKCTDFYHPGDEGGLAWNDETIGVKWPITPDMQLIISEKDQKWPGFKEI---FKFD 190
>gi|329113803|ref|ZP_08242574.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pomorum DM001]
gi|326696813|gb|EGE48483.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetobacter pomorum DM001]
Length = 190
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 82/183 (44%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ +F D+RG+FS+TY+ + ++E G+ + FVQDN S S G IRGLH Q
Sbjct: 6 LAIPDVILITPPRFGDNRGFFSETYNIERMREAGITEPFVQDNQSLSRQKGVIRGLHCQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC G I+D+AVD R SPTYG WV+ E+S N Q++IP GF HGF TL
Sbjct: 66 DPFAQGKLVRCTRGAIWDVAVDARTGSPTYGKWVAAELSEENWSQLWIPPGFLHGFCTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
N EV YK T YS + V W + I WP+ +SEKD P + F+
Sbjct: 126 ENAEVQYKCTALYSKASERAVIWNSAELGIEWPVK-AEDAVLSEKDLLAPEFSAAKGWFQ 184
Query: 181 YDG 183
Y G
Sbjct: 185 YTG 187
>gi|315231845|ref|YP_004072281.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus barophilus MP]
gi|315184873|gb|ADT85058.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus barophilus MP]
Length = 185
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 119/175 (68%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++K + FED RG+F +TY ++ G++ FVQDNHS S G +RGLHFQ+
Sbjct: 8 LEIPDVILIKPKVFEDERGFFMETYKKPDFEKAGIKGEFVQDNHSKSKY-GVLRGLHFQK 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAK+VRCI G I+D+AVD+R+NSPT+G +V + +S N +YIP GFAHGF+ L
Sbjct: 67 EPYAQAKIVRCIRGVIYDVAVDLRKNSPTFGKYVGVILSEYNKYMLYIPRGFAHGFVVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YKV + Y+ +++ G+ W D ++I WP+ + P VSEKD+ P L ++
Sbjct: 127 DVAEVVYKVDNVYAPDYEGGLIWNDPDVNIQWPVEN---PVVSEKDKRWPTLKEL 178
>gi|150004940|ref|YP_001299684.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus ATCC
8482]
gi|294775787|ref|ZP_06741289.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus PC510]
gi|149933364|gb|ABR40062.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus ATCC
8482]
gi|294450373|gb|EFG18871.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus PC510]
Length = 190
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 79/179 (44%), Positives = 111/179 (62%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V +++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+ P
Sbjct: 8 IEGVVVIEPRIFKDERGYFFESFSQREFNEKVMPVNFVQDNESMS-SYGVMRGLHFQQMP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q+KLVRC+ G + D+AVDIR+ SPTYG V++E++ N LQ +IP GFAHGF L
Sbjct: 67 YTQSKLVRCVKGAVLDVAVDIRKGSPTYGQHVAVELTEENHLQFFIPRGFAHGFAVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + D G+ +D+S+ I W + +SEKD P L DSPF+Y
Sbjct: 127 AVFQYKCDNFYAPQADGGIQLRDESLGIDWKIP-VAEAILSEKDLKHPLLKDYDSPFDY 184
>gi|304405208|ref|ZP_07386868.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus curdlanolyticus
YK9]
gi|304346087|gb|EFM11921.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus curdlanolyticus
YK9]
Length = 181
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 116/178 (65%), Gaps = 3/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +++T F D RG+F+++Y+ + G+ FVQDNHS S + GT+RGLHFQ
Sbjct: 7 KLDGVLVIETNVFGDHRGFFTESYNEEKFLAAGIDYKFVQDNHSLSSEAGTVRGLHFQLA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR +AG I+D+AVD+R++S TYG WV + +S +N Q+ +P GFAHGF TL
Sbjct: 67 PKAQTKLVRVVAGAIYDVAVDLRKDSSTYGQWVGVILSESNKRQLLVPQGFAHGFCTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT+V+YKV +YS EHD G+ W D I I WP T +S+KD+ P + + F
Sbjct: 127 NTQVLYKVDAYYSQEHDRGLLWNDPDIGIEWP---TDRVILSDKDKVHPGIREAGIYF 181
>gi|198275009|ref|ZP_03207541.1| hypothetical protein BACPLE_01168 [Bacteroides plebeius DSM 17135]
gi|198272456|gb|EDY96725.1| hypothetical protein BACPLE_01168 [Bacteroides plebeius DSM 17135]
Length = 187
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 113/179 (63%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D+RG+F +++S + +E + FVQDN S S G +RGLHFQRPP
Sbjct: 8 IEGVVIIEPRIFKDARGYFFESFSQREFEEKVGKINFVQDNESMSSY-GVMRGLHFQRPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q+KLVRC+ G + D+AVDIR+ SPTYG V++E++ +N Q +IP GFAHGF L
Sbjct: 67 YTQSKLVRCVKGAVLDVAVDIRKGSPTYGQHVAVELTEDNHRQFFIPQGFAHGFAVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY E D G++ D S+ I W + T +SEKD P L DSPFE+
Sbjct: 127 AIFQYKCDNFYHPEADGGISILDDSLGIDWRIP-TEHAILSEKDTKHPLLKDFDSPFEF 184
>gi|302382272|ref|YP_003818095.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brevundimonas subvibrioides
ATCC 15264]
gi|302192900|gb|ADL00472.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brevundimonas subvibrioides
ATCC 15264]
Length = 205
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 1/185 (0%)
Query: 7 RILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQA 66
+ ++R+F D RGWF++TYS + L + G+ D FVQDN S S GT+RG+HFQRPP+AQA
Sbjct: 21 FLYESRRFGDDRGWFTETYSERALADRGVSDRFVQDNQSLSIAPGTVRGIHFQRPPFAQA 80
Query: 67 KLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126
KLVRC+ GRI D AVD+RR SPTYG WVS E++A+NGLQ+Y+P G+ H F+TLE TEV+
Sbjct: 81 KLVRCLRGRIMDYAVDLRRGSPTYGDWVSAELTADNGLQLYVPVGYGHAFVTLEPRTEVV 140
Query: 127 YKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLPL 186
YKV Y+ + D G+ W D I I W L + P +SEKD+ LP L DSPF+YDG PL
Sbjct: 141 YKVNAVYAADCDGGIVWDDPDIGIEWSLPPSG-PLLSEKDRQLPRLADFDSPFDYDGRPL 199
Query: 187 LSLNM 191
L
Sbjct: 200 EPLPP 204
>gi|195953941|ref|YP_002122231.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hydrogenobaculum sp. Y04AAS1]
gi|195933553|gb|ACG58253.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hydrogenobaculum sp. Y04AAS1]
Length = 190
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 94/183 (51%), Positives = 127/183 (69%), Gaps = 2/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V ++K + F+D RG+F ++Y ++ G+ D+F+QDNHS S G +RGLH+Q+
Sbjct: 9 DIKEVILIKPKVFKDERGFFLESYKKSEFEKNGITDIFIQDNHSKSVK-GVLRGLHYQKE 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+RCI G+IFD+AVDIR+NSPTYG WV E+S N L ++IP GFAHGF+TL
Sbjct: 68 PAAQGKLIRCIKGKIFDVAVDIRKNSPTYGGWVGYELSEENKLMLFIPKGFAHGFLTLSE 127
Query: 122 NTEVIYKVTD-FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E+IYKV++ YS EHD G+ W DK+I I WPL +S+KD+NLP L Q D+ F
Sbjct: 128 EAEIIYKVSEAEYSKEHDKGIIWNDKTISIKWPLEHIKEIILSDKDKNLPTLEQADNNFL 187
Query: 181 YDG 183
Y G
Sbjct: 188 YGG 190
>gi|297526883|ref|YP_003668907.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Staphylothermus hellenicus
DSM 12710]
gi|297255799|gb|ADI32008.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Staphylothermus hellenicus
DSM 12710]
Length = 185
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M+I V ++ + FED RG+F +TY + G++ FVQDNHS S G +RGLHFQR
Sbjct: 8 MDIPDVVLIIPKVFEDERGFFMETYKKPDFERAGIRGNFVQDNHSRSRY-GVLRGLHFQR 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAK+VRC+ G I+D+AVD+RRNS T+G +V + +S N +YIP GFAHGF+ L
Sbjct: 67 EPYAQAKIVRCVRGVIYDVAVDLRRNSKTFGKYVGVILSEFNKYMLYIPRGFAHGFLVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EVIYKV + Y+ E+++G+ W D + I WP+ + P +SEKD+ P L ++
Sbjct: 127 EEAEVIYKVDNLYAPEYEAGLIWNDPDVGIKWPIEE---PILSEKDKKWPTLREL 178
>gi|194466818|ref|ZP_03072805.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri 100-23]
gi|194453854|gb|EDX42751.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri 100-23]
Length = 193
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I+ F D RG+F +TYS + K G+ F+QDN S S G +RGLHFQR
Sbjct: 10 KLQDVKIITPAVFGDHRGFFEETYSDRDFKAAGIDFNFIQDNQSLSTQAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R+ SPTY W +SA+N Q+ +P GFAHGF+TL
Sbjct: 70 KAAQTKLIRVVTGAVLDVIVDLRKGSPTYKQWEGYILSASNHRQLLVPRGFAHGFLTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y E D G++++ ++I WP+ SEKD P L + + +PF
Sbjct: 130 NVNFVYKCDNYYDAEADGGISFKTPELNIDWPIEFDKA-ITSEKDAAQPTLTEFEKDNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|227543972|ref|ZP_03974021.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri
CF48-3A]
gi|300909571|ref|ZP_07127032.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri SD2112]
gi|227186033|gb|EEI66104.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri
CF48-3A]
gi|300893436|gb|EFK86795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus reuteri SD2112]
Length = 193
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I+ F D RG+F +TYS + K G+ F+QDN S S G +RGLHFQR
Sbjct: 10 KLQDVKIITPAVFGDHRGFFEETYSDRDFKAAGIDFNFIQDNQSLSTHAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R+ SPTY W +SA+N Q+ +P GFAHGF+TL
Sbjct: 70 KAAQTKLIRVVTGAVLDVIVDLRKGSPTYKQWEGYILSASNHRQLLVPRGFAHGFLTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
N +YK ++Y E D G++++ ++I WP+ SEKD P L + + +PF
Sbjct: 130 NVNFVYKCDNYYDAEADGGISFKTPELNIDWPIEFDKA-ITSEKDAAQPTLTEFEKDNPF 188
Query: 180 EY 181
Y
Sbjct: 189 VY 190
>gi|323135557|ref|ZP_08070640.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylocystis sp. ATCC 49242]
gi|322398648|gb|EFY01167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylocystis sp. ATCC 49242]
Length = 183
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/179 (49%), Positives = 123/179 (68%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I ++++ +KF D RG+FS+TY++ ++ GL FVQDNHS S D GT+RGLHFQ
Sbjct: 5 LEIEGLKLVTPKKFGDERGFFSETYNASTWEKAGLHYKFVQDNHSLSRDVGTVRGLHFQT 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR + GRI D+AVD+RR+SPT+G V++E+S N Q+ +P GFAHGF+TLE
Sbjct: 65 APFAQDKLVRVVQGRILDVAVDLRRSSPTFGRHVAVELSKENWRQLLVPIGFAHGFVTLE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEV+YKVT+FYS +HD G+AW D + + WP +S KDQ P L + F
Sbjct: 125 PDTEVLYKVTNFYSPQHDCGLAWDDPDLGVAWP-DVAKNAVLSAKDQKWPRLRDLPEVF 182
>gi|294672873|ref|YP_003573489.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella ruminicola 23]
gi|294473377|gb|ADE82766.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella ruminicola 23]
Length = 184
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ V I++ R FEDSRG+F +++S + +E FVQDN S S G +RGLHFQRP
Sbjct: 7 SIDGVFIIEPRIFEDSRGYFFESFSQREFEEKIGPINFVQDNESKS-SYGVMRGLHFQRP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q+KLVRC+ G + D+AVDIR+ SPTYG V++E++ +N Q +IP GFAHGF L
Sbjct: 66 PFTQSKLVRCVKGAVLDVAVDIRKGSPTYGQHVAVELTEDNHRQFFIPKGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY E D G++ D+S++I W + T +S+KD P L ++PF Y
Sbjct: 126 TAVFQYKCDEFYHPEADGGISILDESLNIDWHIP-TDKAILSDKDTKHPLLKDFETPFNY 184
>gi|90425680|ref|YP_534050.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisB18]
gi|90107694|gb|ABD89731.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisB18]
Length = 184
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI V +L ++F D RGWF +TYS L+ LG++ FVQDNHS S GT+RGLHFQ
Sbjct: 6 LNIPGVVVLTPKRFADDRGWFMETYSHPALQALGIELDFVQDNHSLSLHTGTLRGLHFQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQAKLVRC+ GRI D+AVD+R NSPTYG + S E+SA + QI+IP GFAHGF+TLE
Sbjct: 66 PPHAQAKLVRCVRGRILDVAVDVRANSPTYGQYASAELSAADARQIFIPVGFAHGFVTLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEV+YKV+D Y+ + D G+ W D +I W + P +S KD+ LP L SPF
Sbjct: 126 PDTEVVYKVSDIYAPQCDGGIRWNDPTIAFPWNIEHG--PFLSPKDEKLPLLADFVSPF 182
>gi|254462855|ref|ZP_05076271.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacterales bacterium
HTCC2083]
gi|206679444|gb|EDZ43931.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacteraceae bacterium
HTCC2083]
Length = 189
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 90/179 (50%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V + ++F D RG+F ++YS + +++GL FVQDN+S S GT+RGLHFQ PP+A
Sbjct: 12 DVLAVIPQRFGDERGFFCESYSKRRFEDIGLSFDFVQDNYSISAKAGTVRGLHFQAPPHA 71
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLVRC GR+ D+AVDIR+ SPTYG W S E+S NG+Q+ IP GF HGF+TLE NTE
Sbjct: 72 QTKLVRCGQGRLLDVAVDIRKGSPTYGQWTSAEMSFENGVQLLIPKGFLHGFVTLEPNTE 131
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDG 183
IYK D+Y+ E D V + D I + W + D +S+KD+ P L DSPF Y+G
Sbjct: 132 TIYKSDDYYAPECDGAVRFDDPEIGVDWGI-DLKTVILSDKDRAAPLLKDFDSPFVYEG 189
>gi|167770814|ref|ZP_02442867.1| hypothetical protein ANACOL_02165 [Anaerotruncus colihominis DSM
17241]
gi|167666854|gb|EDS10984.1| hypothetical protein ANACOL_02165 [Anaerotruncus colihominis DSM
17241]
Length = 184
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 81/179 (45%), Positives = 115/179 (64%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V + + F D RG+F +++S ++ +E GL FVQDNHS S GT+RG+HFQR
Sbjct: 7 ELDGVYLAEPEVFGDHRGFFMESWSKRVFEEAGLFYDFVQDNHSCSTVKGTLRGIHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQAKLVRC+ G++ D+AVD+R NSP Y WV++E+SA N Q+ IP GF HGF+TL
Sbjct: 67 DKAQAKLVRCVKGKVLDVAVDLRPNSPAYKRWVAVELSAENKKQLLIPRGFGHGFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E +YK ++Y+ E D G+ W D + I W + + P +S KDQN P+L + FE
Sbjct: 127 EVEFLYKADNYYAPEADGGIRWNDPELAIDWGISE---PVLSGKDQNAPWLKDAATGFE 182
>gi|146280479|ref|YP_001170632.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas stutzeri A1501]
gi|14717005|emb|CAC44167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas stutzeri]
gi|145568684|gb|ABP77790.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas stutzeri A1501]
Length = 181
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + F D RG+F +++++ + GL+ FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPDVLIIEPKVFGDERGFFYESFNAAAFEAATGLKRQFVQDNHSKSQR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR +AG +FD+AVD+R++SP++G W +SA N Q++IP GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVVAGEVFDVAVDLRKSSPSFGRWFGTHLSAQNQRQLWIPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ EH+ + W D + I WPL + P +S KD L +
Sbjct: 125 ESAEFLYKTTDYYAPEHERSLLWNDPELGIEWPLDE--APQLSAKDIAGKLLRDAE 178
>gi|242400018|ref|YP_002995443.1| RfbC dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus sibiricus
MM 739]
gi|242266412|gb|ACS91094.1| RfbC dTDP-4-dehydrorhamnose 3,5-epimerase [Thermococcus sibiricus
MM 739]
Length = 185
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++K + FED RG+F +TY ++ G++ F+QDNHS S G +RGLHFQR
Sbjct: 8 LEIPDVILIKPKVFEDERGFFMETYKKPDFEKAGIKGDFIQDNHSKSKY-GVLRGLHFQR 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAK+VRCI G I+D+AVD+R++SPT+G WV + +S +N Q+YIP GFAHGF+ L
Sbjct: 67 EPYAQAKIVRCIRGVIYDVAVDLRKDSPTFGKWVGVILSEHNKWQLYIPKGFAHGFLVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YKV + Y+ ++ G+ W D I I WP+ P+VSEKD P L +
Sbjct: 127 DVAEVVYKVDNVYAPNYEGGIIWNDPDIGIDWPVDK---PTVSEKDMKWPTLREA 178
>gi|225848194|ref|YP_002728357.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644619|gb|ACN99669.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 189
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 114/181 (62%), Gaps = 4/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+K + F D RG+F + Y K G+ FVQDNHS S G +RGLH+Q
Sbjct: 9 EIPEVLIVKPKVFSDDRGFFLEFYKESEFKAAGIDTNFVQDNHSKS-VKGVLRGLHYQLN 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRCI G+IFD+AVDIR+ SPT+G +V++E+S N L ++IP GFAHGF+ L
Sbjct: 68 PKAQGKLVRCIKGKIFDVAVDIRKKSPTFGKYVAVELSEENKLMLWIPKGFAHGFLVLSE 127
Query: 122 NTEVIYKVTD-FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E+IYKV+ YS EHD + W D I+I WP+ P +S+KD+ PFL + F
Sbjct: 128 EAEIIYKVSGSEYSPEHDRAIRWNDPDINIKWPI--DTYPILSQKDEKAPFLKDAEINFI 185
Query: 181 Y 181
Y
Sbjct: 186 Y 186
>gi|209967309|ref|YP_002300224.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Rhodospirillum
centenum SW]
gi|209960775|gb|ACJ01412.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Rhodospirillum
centenum SW]
Length = 191
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 116/181 (64%), Gaps = 1/181 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V ++ R+F D RG+F + Y + + G+ F+QDN S S T+RGLHFQRPP
Sbjct: 8 IAGVLLITPRRFFDDRGYFVELYQEERYRAAGVDARFMQDNRSLSRPVYTVRGLHFQRPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLV+ + G I D+AVDIR SPT+G V++ +SA G Q+Y+P GFAHGF TLE +
Sbjct: 68 FAQAKLVQVLRGSIVDVAVDIRHGSPTFGRHVAVTLSAEAGNQLYVPAGFAHGFCTLEPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TEV YKV+ YS EHD G+ W D ++ I WP VS+KD+ LP L + F Y+
Sbjct: 128 TEVHYKVSAPYSREHDGGIHWADPALGIDWP-AGPDRAVVSDKDRVLPRLADLGPLFHYE 186
Query: 183 G 183
G
Sbjct: 187 G 187
>gi|156340233|ref|XP_001620391.1| hypothetical protein NEMVEDRAFT_v1g231483 [Nematostella vectensis]
gi|156205251|gb|EDO28291.1| predicted protein [Nematostella vectensis]
Length = 181
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V IL+ + F D RG+F ++++++ E GLQ FVQDNHS S G +RGLH+Q
Sbjct: 7 DLPGVIILEPKVFGDQRGFFFESFNARSFAEATGLQREFVQDNHSRSQR-GVLRGLHYQ- 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR AG ++D+AVD+RR+SPT+G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 65 VQQAQGKLVRVTAGEVYDVAVDLRRSSPTFGRWVGVHLSAENNRQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ EH+ + W D ++ I WPL P +S KDQ+
Sbjct: 125 EFAEFLYKTTDYYAPEHERCIRWDDPTLAIDWPLDG--APQLSAKDQSGLSFADA 177
>gi|237808785|ref|YP_002893225.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tolumonas auensis DSM 9187]
gi|237501046|gb|ACQ93639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tolumonas auensis DSM 9187]
Length = 182
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 75/174 (43%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+I++ F D RG+F +T+ + EL + FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPDVKIIEPAVFGDERGFFMETWQEQKFNELVCERRFVQDNHSKSRQ-GILRGLHYQ-T 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR IAG +FD+AVDIRR+SPT+G V + +SA N Q+++P GFAHGF
Sbjct: 65 EQAQGKLVRVIAGEVFDVAVDIRRSSPTFGQSVGVLLSAENKRQLWVPEGFAHGFYVTTE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y+ + + W D ++I WPL+D PS+S KD
Sbjct: 125 TAEFVYKCTNYYNPSAEHSIRWNDPELNIQWPLVDGQQPSLSAKDAEGKLFKDA 178
>gi|325958659|ref|YP_004290125.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanobacterium sp. AL-21]
gi|325330091|gb|ADZ09153.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanobacterium sp. AL-21]
Length = 185
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/178 (43%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ V I++ F D RG+F +TY KE GL FVQDN S S G +RGLHFQ
Sbjct: 10 SIDDVYIIEPTVFGDDRGYFMETYHQGEFKEAGLDMEFVQDNQSRSVR-GVLRGLHFQYT 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G +FD+AVD+R NSPTYG + S+ +S N Q Y+P GFAHGF+ L
Sbjct: 69 Q-PQGKLVRVIKGTVFDVAVDLRENSPTYGQYESVVLSEENKKQFYVPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK T FY+ + + G+ W D I+I WPL + +S+KD L + + +
Sbjct: 128 VAEFTYKCTAFYNADDEGGIMWNDPDINIEWPLKEAGNVVLSDKDSEWKPLKETNVKY 185
>gi|313157732|gb|EFR57143.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alistipes sp. HGB5]
Length = 190
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 107/181 (59%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V IL+ F D+RG+F ++YS + FVQDN S S G +RGLHFQ+
Sbjct: 8 IDGVVILEPEVFGDARGYFFESYSQRRFDAEVRPVRFVQDNESHSRY-GVLRGLHFQKGR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q+KLVR + GR+ D+AVDIRR SPT+G V++E++ +N Q +IP GFAHGF L
Sbjct: 67 YSQSKLVRVVRGRVLDVAVDIRRGSPTFGRHVAVELTEDNKRQFFIPRGFAHGFAVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK + Y+ E + +AW D S+ I W L + +S KD P L++ F+Y+
Sbjct: 127 ATFQYKCDNPYAPESEGAIAWNDPSLGIDWRLAPEDV-VLSPKDSAHPLLSEAGELFDYN 185
Query: 183 G 183
Sbjct: 186 E 186
>gi|56684535|gb|AAW22498.1| RmlC [Lactobacillus rhamnosus]
Length = 190
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+ ++T F D+RG+F+ TY+ + E G+++ F QDN S S + G +RG+H+Q
Sbjct: 9 KLKDVKFVETDVFGDNRGFFTGTYTREKFVEAGIKNDFNQDNQSLSAEAGVLRGMHYQMA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVR + G + D+ VDIR+ SPTYG W +S N Q+ +P GFAHGF+TL
Sbjct: 69 PYAQTKLVRVVTGVVEDVLVDIRKGSPTYGHWEGYILSQYNHRQLLVPKGFAHGFITLTP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N +YKV +Y+ E D G+A+ D I I WP+ T +SEKDQ+ P L ++ F Y
Sbjct: 129 NVNFVYKVEGYYAPEADRGIAFDDPDIGIDWPMS-TAHLIMSEKDQHHPQLKDAENNFIY 187
>gi|212694335|ref|ZP_03302463.1| hypothetical protein BACDOR_03861 [Bacteroides dorei DSM 17855]
gi|237727666|ref|ZP_04558147.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D4]
gi|212662836|gb|EEB23410.1| hypothetical protein BACDOR_03861 [Bacteroides dorei DSM 17855]
gi|229434522|gb|EEO44599.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides dorei 5_1_36/D4]
Length = 190
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 79/179 (44%), Positives = 111/179 (62%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V +++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+ P
Sbjct: 8 IEGVVVIEPRIFKDERGYFFESFSQREFNEKVMPVNFVQDNESMS-SYGVMRGLHFQQMP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q+KLVRC+ G + D+AVDIR+ SPTYG V++E++ N LQ +IP GFAHGF L
Sbjct: 67 YTQSKLVRCVKGAVLDVAVDIRKGSPTYGQHVAVELTEENHLQFFIPRGFAHGFAVLSEI 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + D G+ +D+S+ I W + +SEKD P L DSPF+Y
Sbjct: 127 AVFQYKCDNFYAPQADGGIQLRDESLGIDWKIP-VAEAILSEKDLKHPLLKDYDSPFDY 184
>gi|150008449|ref|YP_001303192.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parabacteroides distasonis
ATCC 8503]
gi|255014199|ref|ZP_05286325.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_7]
gi|256841550|ref|ZP_05547057.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parabacteroides sp. D13]
gi|301309339|ref|ZP_07215281.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
gi|149936873|gb|ABR43570.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parabacteroides distasonis
ATCC 8503]
gi|256737393|gb|EEU50720.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parabacteroides sp. D13]
gi|300832428|gb|EFK63056.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
Length = 185
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 71/179 (39%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + +D+RG+F + + +E + FVQDN S S G +RGLH+Q P
Sbjct: 8 IPGVWIIEPKVLKDARGYFMEAFKQAEFEEHIGKIQFVQDNESCSSK-GVLRGLHYQLAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q+KLVR I GR+ D+AVD+R SPT+G +V++E+S N Q++IP GFAHGF L
Sbjct: 67 YSQSKLVRVIKGRVLDVAVDVREGSPTFGKYVAVELSDENKRQLFIPQGFAHGFHVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YKV + Y+ H+ G+ + D ++ + W + D ++SEKD P L + F+Y
Sbjct: 127 AIFTYKVDNPYTPTHERGIRYDDPTVHVDWSITDPESINLSEKDTKAPLLKDAELNFKY 185
>gi|298376300|ref|ZP_06986256.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_19]
gi|298267337|gb|EFI08994.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_19]
Length = 185
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + +D+RG+F + + +E + FVQDN S S G +RGLH+Q P
Sbjct: 8 IPGVWIIEPKVLKDARGYFMEAFKQAEFEEHIGKIEFVQDNESCSSK-GVLRGLHYQLAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q+KLVR I GR+ D+AVDIR SPT+G +V++E+S N Q++IP GFAHGF L
Sbjct: 67 YSQSKLVRVIKGRVLDVAVDIREGSPTFGKYVAVELSDENKRQLFIPQGFAHGFHVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YKV + Y+ H+ G+ + D ++ + W + D ++SEKD P L + F+Y
Sbjct: 127 AIFTYKVDNPYTPTHERGIRYDDPTVHVDWSITDPESINLSEKDTKAPSLKDAELNFKY 185
>gi|327478701|gb|AEA82011.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas stutzeri DSM
4166]
Length = 181
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + F D RG+F +++++ + GL+ FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPDVLIIEPKVFGDERGFFYESFNAAAFEAATGLKRQFVQDNHSKSQR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR +AG +FD+AVD+R++SP++G W +SA N Q++IP GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVVAGEVFDVAVDLRKSSPSFGRWFGTHLSAQNQRQLWIPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ EH+ + W D + I WP + P +S KDQ L +
Sbjct: 125 ESAEFLYKTTDYYAPEHERSLLWNDPELGIQWPFDE--APQLSAKDQAGKLLRDAE 178
>gi|78357970|ref|YP_389419.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220375|gb|ABB39724.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 185
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 3/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ ++ R F DSRG+F +++ ++L E GL + FVQDNH+ S G +RGLH Q P
Sbjct: 7 EFPGLTCIRPRVFHDSRGFFLESFRARLFAEQGLPEEFVQDNHACSAQAGVVRGLHMQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLV G +FD+A+D+R SPTYG + +SA N L+++IP GFAHG+MTLE
Sbjct: 67 PAAQGKLVWVTRGSVFDVALDLRTGSPTYGKAYTAVLSAANFLRLFIPRGFAHGYMTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+TE YKV +Y+ + ++G+ W D +DI WP + +S KD LP L SPF Y
Sbjct: 127 HTEFQYKVDAYYAPQAEAGIRWDDPDLDIPWP---DMEAVLSPKDAELPRLCDFASPFVY 183
>gi|302875844|ref|YP_003844477.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium cellulovorans
743B]
gi|307689277|ref|ZP_07631723.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium cellulovorans
743B]
gi|302578701|gb|ADL52713.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium cellulovorans
743B]
Length = 185
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ F D RG+F +TY+ KE GL VFVQDN S S G +RGLHFQ
Sbjct: 11 IKDLYIIEPTVFGDHRGYFMETYNYDEFKEAGLDMVFVQDNQSKSKK-GVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G ++D+AVD+R S TYG + +S N Q Y+P GFAHGF+
Sbjct: 69 FPQGKLVRVIKGEVYDVAVDLREGSETYGKCYGVFLSEENKRQFYVPEGFAHGFLVTSEE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E +YK T+ Y E + G+ W D I + WPL +S+KD+N L + + F
Sbjct: 129 AEFVYKCTNLYHPEFEGGILWNDPEIGVEWPLDGIEEVLLSDKDKNAKTLKESNVKF 185
>gi|121592970|ref|YP_984866.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax sp. JS42]
gi|120605050|gb|ABM40790.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax sp. JS42]
Length = 182
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 113/179 (63%), Gaps = 4/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F ++++ + E+ G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVVLIEPKVFGDARGFFFESFNQRAFNEVTGTNHHFVQDNHSRSTK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FD+AVDIR++S T+G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVVQGAVFDVAVDIRKSSATFGQWVGVELSAENHRQLWVPPGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ +YK TD+Y+ +++ +AW D ++ I WP + P++S KD L Q + P
Sbjct: 124 SDTADFLYKTTDYYAPQYERCIAWNDPTLAIAWP-DLGMRPTLSAKDGAGKLLQQAELP 181
>gi|163743492|ref|ZP_02150870.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phaeobacter gallaeciensis
2.10]
gi|161383195|gb|EDQ07586.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phaeobacter gallaeciensis
2.10]
Length = 184
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 4/182 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V+IL +F D+RG+F ++++ + E GL FVQDNHS S + GT+RGLHFQ P
Sbjct: 7 DLPGVKILTPARFGDARGFFCESWNKARMAEAGLDFDFVQDNHSLSMEVGTLRGLHFQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVRC G +FD+AVDIR+ SPTYG W +E+SA NG Q+ IP GF HGF+T
Sbjct: 67 PHAQAKLVRCGQGALFDVAVDIRKGSPTYGRWTGVELSAANGRQLLIPAGFLHGFITRSP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TEV+YK +Y+ + D GVAW S I W T P +SEKD P +DSPF +
Sbjct: 127 GTEVLYKCDAYYAPDCDGGVAWD--SCGIDWGFDGT--PVLSEKDAAAPRFEDLDSPFVW 182
Query: 182 DG 183
+G
Sbjct: 183 EG 184
>gi|188588633|ref|YP_001922562.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E3 str.
Alaska E43]
gi|188498914|gb|ACD52050.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E3 str.
Alaska E43]
Length = 192
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ V I++ + F D+RG+F +TY+ + E GL FVQDN S S G +RGLHFQ
Sbjct: 10 SIDGVYIIEPKVFGDNRGYFMETYNREQFLEAGLDMTFVQDNESRSTK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++Q KLVR G +FD+AVD+R SPTYG + ++ ++ N Q YIP GFAHGF+ L
Sbjct: 68 KHSQGKLVRATKGEVFDVAVDLRHGSPTYGKYEAVILTEENKKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID----S 177
YK TD Y+ E+D GV W D I+I WPL +SEKD+ P L +D S
Sbjct: 128 EAVFNYKCTDLYAPEYDGGVMWNDNDINIKWPLDKIEDIVLSEKDKVHPNLKDLDLKNYS 187
Query: 178 PFEYD 182
F Y
Sbjct: 188 DFMYK 192
>gi|41033607|emb|CAF18470.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoproteus tenax]
Length = 187
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 107/181 (59%), Gaps = 4/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ F D RG+F++ Y G+ FVQ + S S G +RGLH+Q
Sbjct: 9 LEIPDVILIEPVVFPDHRGFFAELYKRTDFLAGGVPYDFVQVSVSMSRR-GVVRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV + GR+ D+AVD+RR SP +G +V++E+SA+ ++IP GFAHGF LE
Sbjct: 68 KPAEQGKLVAVLRGRVLDVAVDVRRGSPWFGRYVAVELSADEPRLLWIPPGFAHGFQALE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T +Y +T YS +H+ V W D + I WP+ D +SEKD+ P L + ++ FE
Sbjct: 128 DDTLFMYLMTKEYSPQHERCVRWDDPEVGIPWPIGD---AILSEKDRRCPPLREAETNFE 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|317498846|ref|ZP_07957132.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316893874|gb|EFV16070.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 184
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F+D RG+F +TY+ +KE GL VFVQDN S S G +RGLHFQ
Sbjct: 10 DIEGLYVIEPTVFKDERGYFVETYNQNDMKEAGLDMVFVQDNQSMSTR-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G++FD+AVD+R +S TYG W +E+SA N Q YIP GFAHGF+ L
Sbjct: 68 QFPQGKLVRVVRGKVFDVAVDLRSDSKTYGKWFGVELSAENMKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TDFY + G+AW D I + WPL + + +SEKDQ L F++
Sbjct: 128 EAEFCYKCTDFYHPGDEGGLAWNDPEIGVEWPLEEGVDLIISEKDQKWKGLKD---TFKF 184
>gi|238927849|ref|ZP_04659609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas flueggei ATCC
43531]
gi|238884294|gb|EEQ47932.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas flueggei ATCC
43531]
Length = 186
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ + F D+RGWF +++S K +++ G+ FVQDNHSFS GT+RGLH+Q P
Sbjct: 8 LPGVMIIEPQVFGDARGWFMESWSEKKMEDAGIHAAFVQDNHSFSAQKGTLRGLHYQLNP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQAKL+R G IFD+AVDIRRNSPTY WV E+SA N Q++IP GFAHGF+TL +
Sbjct: 68 MAQAKLLRASRGAIFDVAVDIRRNSPTYAQWVGAELSAENYRQLFIPRGFAHGFITLTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ-IDSPFEY 181
EV YK + Y+ + D + W D +I I WPL T +SEKD P L + + F Y
Sbjct: 128 VEVQYKADNLYASDCDGNIRWDDPTIGIAWPLAPT---VLSEKDAAAPLLAERSELNFVY 184
Query: 182 D 182
+
Sbjct: 185 E 185
>gi|330823239|ref|YP_004386542.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alicycliphilus denitrificans
K601]
gi|329308611|gb|AEB83026.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alicycliphilus denitrificans
K601]
Length = 181
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F ++++ K E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVVLIEPKVFGDARGFFFESFNQKAFDEATGTNFQFVQDNHSRSGR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G ++D+AVDIRRNSPT+G WV E+S +N Q+++P GFAHGF+ L
Sbjct: 65 -VQQPQGKLVRVVRGAVWDVAVDIRRNSPTFGRWVGAELSEDNQRQLWVPPGFAHGFVAL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ +H+ +AW D + I WP P +S KDQ L + +
Sbjct: 124 SESADFLYKTTDYYAPQHERCIAWNDAQLAIAWPYAGE--PVLSAKDQAGKPLAEAE 178
>gi|167648897|ref|YP_001686560.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter sp. K31]
gi|167351327|gb|ABZ74062.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter sp. K31]
Length = 190
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 82/184 (44%), Positives = 116/184 (63%), Gaps = 6/184 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQ 59
+++ V ++ + DSRGWFS+T+ L+E G + FVQDNH S G +RGLHFQ
Sbjct: 6 LSVPDVLLITPARHGDSRGWFSETFRQSALEEAGFEGGAFVQDNHVRSTRRGILRGLHFQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+PP+AQ KL+RC G IFD+AVDIRR SPT+G WV E+SA+N Q+ +P GFAH + TL
Sbjct: 66 KPPHAQDKLLRCARGAIFDVAVDIRRGSPTFGQWVGAELSADNARQLLVPKGFAHAYCTL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVS--EKDQNLPFLNQIDS 177
EV+YKVTD+Y+ + + W D ++ I WP+ +S ++D L +D+
Sbjct: 126 TEECEVLYKVTDYYAPAAEGALRWNDPAVGIDWPVP---AAEISTNDRDAAASLLADLDT 182
Query: 178 PFEY 181
PF Y
Sbjct: 183 PFTY 186
>gi|319761364|ref|YP_004125301.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Alicycliphilus denitrificans
BC]
gi|317115925|gb|ADU98413.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alicycliphilus denitrificans
BC]
Length = 181
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F ++++ K E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVVLIEPKVFGDARGFFFESFNQKAFDEATGTHFQFVQDNHSRSGR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G ++D+AVDIRRNSPT+G WV E+S +N Q+++P GFAHGF+ L
Sbjct: 65 -VQQPQGKLVRVVRGAVWDVAVDIRRNSPTFGRWVGAELSEDNQRQLWVPPGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ +H+ +AW D + I WP P +S KDQ L + +
Sbjct: 124 SESADFLYKTTDYYAPQHERCIAWNDAQLAIAWPYAGE--PVLSAKDQAGKPLAEAE 178
>gi|163740057|ref|ZP_02147461.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phaeobacter gallaeciensis
BS107]
gi|161386688|gb|EDQ11053.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phaeobacter gallaeciensis
BS107]
Length = 184
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 91/182 (50%), Positives = 119/182 (65%), Gaps = 4/182 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V+IL +F D+RG+F ++++ + E GL FVQDNHS S + GT+RGLHFQ P
Sbjct: 7 DLPGVKILTPARFGDARGFFCESWNKARMAEAGLDFDFVQDNHSLSMEVGTLRGLHFQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVRC G +FD+AVDIR+ SPTYG W +E+SA NG Q+ IP GF HGF+T
Sbjct: 67 PHAQAKLVRCGQGALFDVAVDIRKGSPTYGRWTGVELSAANGRQLLIPAGFLHGFITCSP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TEV+YK +Y+ + D GVAW S I W T P +SEKD P DSPF +
Sbjct: 127 GTEVLYKCDAYYAPDCDGGVAWD--SCGIDWGFDGT--PVLSEKDARAPRFEDFDSPFVW 182
Query: 182 DG 183
+G
Sbjct: 183 EG 184
>gi|89068412|ref|ZP_01155815.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Oceanicola granulosus
HTCC2516]
gi|89046066|gb|EAR52125.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Oceanicola granulosus
HTCC2516]
Length = 185
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 80/178 (44%), Positives = 117/178 (65%), Gaps = 1/178 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V IL+ R+F D RGWF ++++ + L+ G++ FVQDNHS+S GT+R LH+Q PP
Sbjct: 8 LPGVLILEPRRFGDDRGWFMESWNRETLRGHGIEIDFVQDNHSYSAPKGTVRALHYQSPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVR G + D+AVD RR SPTYG V++++SA NG Q+++P GF HGF TL +
Sbjct: 68 HAQAKLVRVARGTVRDVAVDARRGSPTYGRHVAVDLSAENGRQLFVPAGFLHGFATLTPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+++YK +D Y+ + D VAW D + I W + D + ++S KD+ P SPF
Sbjct: 128 VDLLYKCSDIYAPDCDGAVAWDDPDLGIDWGI-DPVTATLSNKDRAAPQFADWTSPFT 184
>gi|134300868|ref|YP_001114364.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfotomaculum reducens
MI-1]
gi|134053568|gb|ABO51539.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfotomaculum reducens
MI-1]
Length = 186
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 89/180 (49%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N++ V I++ F D RGWF +TY+ E GL FVQDN SFS GT+RG+H+Q
Sbjct: 7 NLDGVIIVEPAVFGDHRGWFMETYNESKFLEAGLTYKFVQDNQSFSAVKGTLRGIHYQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLVRCI G IFDIAVDIR+ SP +G W+ ++++A N Q+ IP GFAHGFMTL
Sbjct: 67 PKAQAKLVRCIRGAIFDIAVDIRKGSPNFGKWIGIKLTAENKKQLLIPRGFAHGFMTLTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ EV YKV + Y+ E D + W D I I WP+ I P +S KD+ P L ++ F Y
Sbjct: 127 DVEVQYKVDELYAPELDRSILWSDPVIGIKWPM--DITPLLSTKDEKAPLLEDAENNFSY 184
>gi|325281645|ref|YP_004254187.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Odoribacter splanchnicus DSM
20712]
gi|324313454|gb|ADY34007.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Odoribacter splanchnicus DSM
20712]
Length = 190
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F D RG+F +++S + + + VFVQDN S S G +RGLHFQ+PP
Sbjct: 8 IPGVVIVQPRIFGDERGYFFESFSQRDFERQVCKTVFVQDNESKSCY-GVVRGLHFQQPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR + GR+ D+AVDIR+ SPT+G VS+E++ N Q ++P GFAHGF L
Sbjct: 67 YAQSKLVRVVKGRVLDVAVDIRKGSPTFGKHVSVELTEENKRQFFVPRGFAHGFAVLSAE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ E + +AW D + I W + + +SEKD+ P L ++D F+Y
Sbjct: 127 AVFQYKCDNFYAPESEGALAWDDPDLGIDWRIPAAKM-ILSEKDKRHPRLKEVDWLFDYK 185
Query: 183 G 183
Sbjct: 186 D 186
>gi|316935627|ref|YP_004110609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
DX-1]
gi|315603341|gb|ADU45876.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
DX-1]
Length = 184
Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V++L R+F D RGWFS++Y+ K L + + FVQDNHS+S GTIRG HFQ
Sbjct: 6 LDIPGVKLLSPRRFSDDRGWFSESYNQKTLAQFDIHWQFVQDNHSYSKHAGTIRGFHFQA 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRC+ G I DIAVD+R SPTY WV+ E+SA NG Q+++P GFAH F+TL+
Sbjct: 66 PPHAQDKLVRCVRGSIVDIAVDLRAGSPTYAKWVAAELSAENGEQLFVPVGFAHAFITLQ 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEV+YKVT FY+ E D GV W D +I W L P +S KD LP L I++PF
Sbjct: 126 PDTEVLYKVTSFYAPESDGGVRWDDPTIGFPWKLPQG-APHLSAKDAKLPRLQDIETPF 183
>gi|239503785|ref|ZP_04663095.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Acinetobacter
baumannii AB900]
Length = 188
Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 6/180 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-----DVFVQDNHSFSFDCGTIRGL 56
I + IL+ + F D RGWF ++++ K ++ + FVQDNHS S G +RGL
Sbjct: 7 KIKGLLILEPKVFGDDRGWFMESFNQKAFEQALHERGLDIPQFVQDNHSLSQK-GVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q PYAQ KLVR + G+ +D+AVDIR++SPT+G WV +E++ N Q +IP GFAHGF
Sbjct: 66 HYQLNPYAQGKLVRVVQGKAWDVAVDIRKSSPTFGQWVGVELTGENHKQFWIPAGFAHGF 125
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ LE NT+ +YK T++Y+ E + + W D SI I WPL + VS+KD+ L
Sbjct: 126 VALEDNTQFLYKTTNYYNKESEGAIVWNDPSIAIDWPLSNINQVLVSDKDKVASKLEDAK 185
>gi|319791467|ref|YP_004153107.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Variovorax paradoxus EPS]
gi|315593930|gb|ADU34996.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Variovorax paradoxus EPS]
Length = 184
Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D+RG+F ++Y+ ++ + G F QDNHS S G +RGLH+Q
Sbjct: 8 IPDVLILEPKVFGDARGFFLESYNEEVFRRATGSDLAFKQDNHSRSSK-GVLRGLHYQ-V 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIR SPT+G WV +E++ +N Q+++P G AHGF+ L
Sbjct: 66 KQPQGKLVRVVQGAVFDVAVDIRPTSPTFGKWVGVELNESNHRQLWVPPGLAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ +YK TD+Y+ H+ +AW D +I I WPL P +S KD P L +
Sbjct: 126 TADFLYKTTDYYAPAHERSIAWNDPAIGIDWPLS-GASPVLSAKDAAAPTLAE 177
>gi|153206209|ref|ZP_01945472.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii 'MSU Goat
Q177']
gi|212217811|ref|YP_002304598.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii CbuK_Q154]
gi|120577339|gb|EAX33963.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii 'MSU Goat
Q177']
gi|212012073|gb|ACJ19453.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coxiella burnetii CbuK_Q154]
Length = 189
Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats.
Identities = 78/183 (42%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M I V ++K++ F D RG+F +T+ + G+ F+QDNHS S G +RGLH+Q
Sbjct: 8 MPIPEVILIKSKVFTDDRGFFIETFKQSDFRRHGINGEFLQDNHSLSMKKGVLRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVR + G++FD+AVD+RR SPT+G WVS E+S+ N ++IP GFAHG + LE
Sbjct: 68 DPHAQGKLVRVVLGKVFDVAVDLRRESPTFGKWVSTELSSTNNHMLWIPPGFAHGMLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT ++YK T Y + + W D I+I WP+ + + +SEKD FL + + +
Sbjct: 128 ENTHLLYKCTAEYVPASERYIRWDDPDINIKWPIKNNL--LLSEKDAAGVFLQRAEINAQ 185
Query: 181 YDG 183
Y G
Sbjct: 186 YHG 188
>gi|226943712|ref|YP_002798785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azotobacter vinelandii DJ]
gi|226718639|gb|ACO77810.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azotobacter vinelandii DJ]
Length = 182
Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 112/177 (63%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ + + + + F D RG+F ++Y+ + ++ G FVQDNHS S G +RGLH+Q
Sbjct: 6 LDISGLVLFEPKVFGDDRGFFFESYNQRHFEDAVGRAVNFVQDNHSRS-AQGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PP+AQ KLVR + G +FD+AVDIR++SPT+G WV + +SA N Q +IP GFAHGF+TL
Sbjct: 65 LPPHAQGKLVRVVQGEVFDVAVDIRKSSPTFGQWVGVLLSAENKRQFWIPEGFAHGFVTL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + + W D ++ I W P +S KDQ P L +
Sbjct: 125 SETAEFLYKTTDYYAPDSERSILWNDPALAIDW--RGIEAPLLSGKDQKAPLLANAE 179
>gi|323483216|ref|ZP_08088607.1| hypothetical protein HMPREF9474_00356 [Clostridium symbiosum
WAL-14163]
gi|323691340|ref|ZP_08105615.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium symbiosum
WAL-14673]
gi|323403489|gb|EGA95796.1| hypothetical protein HMPREF9474_00356 [Clostridium symbiosum
WAL-14163]
gi|323504680|gb|EGB20467.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium symbiosum
WAL-14673]
Length = 186
Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 105/181 (58%), Gaps = 5/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F+D RG+F +TY+ +E GL VFVQDN S S G +RGLH+Q
Sbjct: 10 DIEGLYVIEPTVFKDERGYFVETYNQNDFREAGLDMVFVQDNQSMSVK-GVLRGLHYQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R S TYG W + ISA N Q YIP GFAHGF+ L
Sbjct: 68 EFPQGKLVRAVRGEVFDVAVDLRTGSRTYGKWFGVVISAENKKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TDFY + G+A+ D I I WP+ + + +SEKD+ F++
Sbjct: 128 EAEFAYKCTDFYHPGDEGGLAYNDPEIGIEWPVTEGMELIISEKDKKWGGFKD---TFKF 184
Query: 182 D 182
Sbjct: 185 Q 185
>gi|302340708|ref|YP_003805914.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta smaragdinae DSM
11293]
gi|301637893|gb|ADK83320.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta smaragdinae DSM
11293]
Length = 185
Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I + ++K F D RG+F +TY + + G+ ++FVQDNHS S IRGLH Q+
Sbjct: 8 LAIEGLVVVKPHAFVDERGFFMETYKASAFQTAGIHEIFVQDNHSRSRK-NVIRGLHLQK 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PY+Q KLVRC+AG ++D+AVD+R SPTY W LE+SA N L ++P GFAHGF L
Sbjct: 67 NPYSQGKLVRCVAGVVWDVAVDLRVGSPTYKQWYGLELSAENRLMFFLPPGFAHGFAVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E +YKVT Y+ E D G+ W D I I WP+ + + +SEKD+ LP+L+ ++ P+
Sbjct: 127 DTAESVYKVTAEYAPESDGGIRWNDPDIGIKWPISEDEV-LISEKDRGLPWLSDLEEPYV 185
>gi|221065027|ref|ZP_03541132.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni KF-1]
gi|220710050|gb|EED65418.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni KF-1]
Length = 183
Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F +++ L + G F+QDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVFLIEPKVFGDARGFFLESFRQDLFNQATGTNCEFIQDNHSRSSK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PP+AQ KLVR I+G +FD+AVDIRRNSPT+G WV E+SA N Q++IP GFAHGF+ L
Sbjct: 65 LPPHAQGKLVRVISGAVFDVAVDIRRNSPTFGQWVGAELSAENHHQLWIPPGFAHGFVVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T +Y+ E D G+ W D + I WP LD I S+SEKD+N P Q +
Sbjct: 125 SDTADFVYKTTAYYAPESDRGLLWNDPDLGIAWPQLD-IEFSLSEKDRNQPAFKQAE 180
>gi|317153812|ref|YP_004121860.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio aespoeensis
Aspo-2]
gi|316944063|gb|ADU63114.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio aespoeensis
Aspo-2]
Length = 190
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 115/181 (63%), Gaps = 1/181 (0%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ +L+ R F+D RG+F ++YS + +G+ FVQDNH++S D +RG HFQ PP+
Sbjct: 9 PGLLVLEPRVFQDERGFFLESYSRETFSRVGIDCEFVQDNHAYSRDVCVLRGFHFQLPPH 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
AQAKLV G + D+ VD+R+ SPT+G + +SA N +++IP GF H ++T+ +T
Sbjct: 69 AQAKLVWVTRGAVLDVVVDLRKGSPTFGKCQHVILSAANFKRMFIPRGFGHAYVTIMPDT 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITW-PLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E +YKV Y +H+ G+AW D I W P LD +P +SEKD+ L FL + DSPF ++
Sbjct: 129 EFLYKVDAPYRPDHECGLAWNDPDIGFDWSPALDGRMPVLSEKDRRLGFLAEFDSPFTHE 188
Query: 183 G 183
Sbjct: 189 E 189
>gi|332885219|gb|EGK05470.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dysgonomonas mossii DSM
22836]
Length = 197
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + F D RG+F ++Y+ FVQDN S S G +RGLHFQ+PP
Sbjct: 9 IKDVVIIEPKIFGDDRGYFFESYNQAEFNTSIRTVHFVQDNESKSCY-GVLRGLHFQKPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR I G + D+AVDIRRNSPT+G V++ +S N Q++IP GFAHGF+ L
Sbjct: 68 FAQSKLVRVIEGEVLDVAVDIRRNSPTFGKHVAVILSGENHRQLFIPRGFAHGFVVLSNE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK + YS + + +AW D I I W ++ +SEKD PFL F+Y+
Sbjct: 128 AVFQYKCDNSYSPQSEGAIAWNDPEIGIDW-IVAPEDIILSEKDTRHPFLKDATQLFDYN 186
>gi|193222278|emb|CAL61333.2| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) (dTDP-L-rhamnose synthetase)
[Herminiimonas arsenicoxydans]
Length = 181
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
M I V +++ + F D RG+F ++++ + G FVQDNHS S G +RGLH+Q
Sbjct: 6 MAIPDVLLIEPKVFGDDRGFFFESFNEQRFAAAVGKTVEFVQDNHSRSAR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV +SA N Q++IP GFAHGF+
Sbjct: 65 IQQ-PQGKLVRVVSGEVFDVAVDIRKSSPTFGLWVGALLSAENKRQMWIPEGFAHGFVVT 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ H+ +AW D +I I WP+ + P +S KDQN L +
Sbjct: 124 SDSAEFLYKTTDYWAPGHERCIAWNDPAIGIEWPITGS--PILSGKDQNGTSLADAE 178
>gi|198276704|ref|ZP_03209235.1| hypothetical protein BACPLE_02903 [Bacteroides plebeius DSM 17135]
gi|198270229|gb|EDY94499.1| hypothetical protein BACPLE_02903 [Bacteroides plebeius DSM 17135]
Length = 191
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ R F+D RG+F +++S + + FVQDN S S G +RGLHFQ+P
Sbjct: 7 EIEGVVIIEPRLFKDERGYFFESFSQRDFDKQVRTIHFVQDNESKSCY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR I G + D+AVDIR+ SPT+G V++E++ +N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVIKGAVLDVAVDIRKGSPTFGQHVAVELTEDNHRQFFIPRGFAHGFSVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D ++ I W + T +SEKD++ P L + F+Y
Sbjct: 126 EVIFQYKCDNFYAPQSEGAIAWNDPALKIDWRIP-TEKVILSEKDKHHPLLADAEWLFDY 184
>gi|291559812|emb|CBL38612.1| dTDP-4-dehydrorhamnose 3,5-epimerase [butyrate-producing bacterium
SSC/2]
Length = 184
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F+D RG+F +TY+ +KE GL VFVQDN S S G +RGLHFQ
Sbjct: 10 DIEGLYVIEPTVFKDERGYFVETYNQNDMKEAGLDMVFVQDNQSMSTR-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G++FD+AVD+R +S TYG W +E+SA N Q YIP GFAHGF+ L
Sbjct: 68 QFPQGKLVRVVRGKVFDVAVDLRSDSKTYGKWFGVELSAENMKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TDFY + G+ W D I + WPL + + +SEKDQ L F++
Sbjct: 128 EAEFCYKCTDFYHPGDEGGLTWNDPEIGVEWPLEEGVDLIISEKDQKWKGLKD---TFKF 184
>gi|315225494|ref|ZP_07867307.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga ochracea
F0287]
gi|314944592|gb|EFS96628.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga ochracea
F0287]
Length = 182
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D RG+F +++S + EL VFVQDN S S G +RGLHFQ+P
Sbjct: 7 KIEGVVIIEPQVFFDGRGYFFESFSQQRFNELVSPTVFVQDNESQSTY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVR + G + D+AVD+R SP++G + S+ ++ N Q +IP GFAHGF L
Sbjct: 66 PFAQAKLVRVVKGEVLDVAVDLREGSPSFGQYESVILNEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK ++Y+ E + V W D +I I W L ++ +SEKD+ P L +
Sbjct: 126 EAIFQYKCDNYYAPESEGSVRWDDPTIGIDWRLPAEVI-QLSEKDKKAPLLVEAK 179
>gi|298290100|ref|YP_003692039.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Starkeya novella DSM 506]
gi|296926611|gb|ADH87420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Starkeya novella DSM 506]
Length = 193
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 85/181 (46%), Positives = 113/181 (62%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ + D RG+F +TY G+ FVQDN S S G +RGLHFQ
Sbjct: 7 LAIPDVVLVQPVRHGDGRGYFCETYKKPAFDAFGIDLAFVQDNESLSRPVGVVRGLHFQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQAKLVR + G IFD+AVDIRR SP+YG WV+ ++A G Q+++P GFAHGF TLE
Sbjct: 67 PPMAQAKLVRVLRGAIFDVAVDIRRGSPSYGKWVAATLTAEEGNQLFMPHGFAHGFCTLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T + YKV YS +D+G+AW D + I WP+ T +S+KD+ P L SPF
Sbjct: 127 PDTLIAYKVDAPYSRPNDAGIAWDDPDLAIDWPVT-TETAVLSDKDRVQPRLRDYASPFA 185
Query: 181 Y 181
Y
Sbjct: 186 Y 186
>gi|260170808|ref|ZP_05757220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D2]
gi|315919142|ref|ZP_07915382.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D2]
gi|313693017|gb|EFS29852.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D2]
Length = 190
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 83/187 (44%), Positives = 112/187 (59%), Gaps = 3/187 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V I++ R F+D RG+F +++S + E FVQDN S S G +RGLHFQ
Sbjct: 7 NIEGVVIIEPRLFKDDRGYFFESFSQREFDEKVRPIKFVQDNESMS-SYGVMRGLHFQTM 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+Q+KLVRC+ G + D+AVDIR+ SPTYG V++E++ N Q +IP GFAHGF L
Sbjct: 66 PYSQSKLVRCVKGTVLDVAVDIRKGSPTYGQHVAVELTEENHRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ +HD G++ D S+ I W + T +SEKD P L +SPF Y
Sbjct: 126 KAVFQYKCDNFYAPQHDGGISILDDSLGICWRIP-TGKAILSEKDTKHPLLKDFESPFLY 184
Query: 182 DGLPLLS 188
G L
Sbjct: 185 -GEDLYK 190
>gi|154490151|ref|ZP_02030412.1| hypothetical protein PARMER_00381 [Parabacteroides merdae ATCC
43184]
gi|154089043|gb|EDN88087.1| hypothetical protein PARMER_00381 [Parabacteroides merdae ATCC
43184]
Length = 217
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 110/180 (61%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F+D+RG+F + + +E + FVQDN S S G +RGLH+Q
Sbjct: 39 EIPGVWIIEPKVFKDARGYFMEAWKKAEFEEHIGKVEFVQDNESCSSK-GVLRGLHYQLA 97
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+Q+KLVR I G + D+AVD+R+ SPT+G +V++E+S N Q +IP GFAHGF +
Sbjct: 98 PYSQSKLVRVIKGCVLDVAVDLRKGSPTFGKYVAVELSDENKRQFFIPQGFAHGFHVMSE 157
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YKV + Y+ H+ G+ + D ++ + W + + + ++S+KD+N L + FE+
Sbjct: 158 EAVFTYKVDNPYAPTHERGLRFDDPTVGVDWKITEPAILNLSDKDRNAALLQDAEINFEF 217
>gi|300728483|ref|ZP_07061842.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
gi|299774201|gb|EFI70834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
Length = 190
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/182 (40%), Positives = 107/182 (58%), Gaps = 2/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI+ V I++ R F D RG+F ++++ K E FVQDN S S G +RGLHFQ+
Sbjct: 7 NIDGVVIIEPRIFADERGYFYESWNEKEFNEKVRPIRFVQDNQSKSSY-GVLRGLHFQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++Q+KLVR + GR+ D+AVDIR+ SPT+G V++E++ +N Q +IP GFAHGF L
Sbjct: 66 EHSQSKLVRVVKGRVLDVAVDIRKGSPTFGQHVAVELTEDNQRQFFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK + Y E + +AW D+++ I W + +SEKD N P L F+Y
Sbjct: 126 TAIFQYKCDNLYCKESEGAIAWDDEALGIDWKIP-ADQVILSEKDANHPLLKDSPYLFDY 184
Query: 182 DG 183
Sbjct: 185 QE 186
>gi|167765914|ref|ZP_02437967.1| hypothetical protein CLOSS21_00405 [Clostridium sp. SS2/1]
gi|167712412|gb|EDS22991.1| hypothetical protein CLOSS21_00405 [Clostridium sp. SS2/1]
Length = 194
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F+D RG+F +TY+ +KE GL VFVQDN S S G +RGLHFQ
Sbjct: 20 DIEGLYVIEPTVFKDERGYFVETYNQNDMKEAGLDMVFVQDNQSMSTR-GVLRGLHFQ-K 77
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G++FD+AVD+R +S TYG W +E+SA N Q YIP GFAHGF+ L
Sbjct: 78 QFPQGKLVRVVRGKVFDVAVDLRSDSKTYGKWFGVELSAENMKQFYIPEGFAHGFLVLSD 137
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TDFY + G+ W D I + WPL + + +SEKDQ L F++
Sbjct: 138 EAEFCYKCTDFYHPGDEGGLTWNDPEIGVEWPLEEGVDLIISEKDQKWKGLKD---TFKF 194
>gi|283798719|ref|ZP_06347872.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. M62/1]
gi|291073581|gb|EFE10945.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. M62/1]
gi|295090733|emb|CBK76840.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium cf.
saccharolyticum K10]
gi|295114995|emb|CBL35842.1| dTDP-4-dehydrorhamnose 3,5-epimerase [butyrate-producing bacterium
SM4/1]
Length = 184
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/173 (45%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F+D RG+F +TY+ KE GL VFVQDN S S G +RGLH+Q
Sbjct: 10 DIKGLYVIEPTVFKDERGYFVETYNQNDFKEAGLDMVFVQDNQSMSVK-GVLRGLHYQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR I G +FD+AVD+R +S TYG W + +SA N Q YIP GFAHGF+ L
Sbjct: 68 QYPQGKLVRAIRGTVFDVAVDLRADSETYGKWFGVVLSAENKKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TDFY + G+AW D I + WP+ + + +SEKDQ
Sbjct: 128 EAEFAYKCTDFYHPGDEGGLAWNDPEIGVEWPIEEGMKLIISEKDQKWGGFKD 180
>gi|60418017|dbj|BAD90657.1| polysaccharide synthesis enzyme [Acetobacter tropicalis]
Length = 185
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ +F D+RG+FS+TY+ +++ G+ FVQDN S S G +RGLH Q
Sbjct: 6 LAIPDVILVTPPRFGDNRGFFSETYNIDRMRDAGITQPFVQDNQSLSRQKGVVRGLHCQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC G I+D+A+D R SPTYG WV+ E+S N Q++IP GF HGF TL
Sbjct: 66 DPYAQGKLVRCTKGAIWDVAIDARTGSPTYGKWVAAELSEENWSQLWIPPGFLHGFCTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
N EV YK T Y+ + V W + I WP+ +SEKD P + F+
Sbjct: 126 ENAEVQYKCTGLYNKASERAVIWNSAELAIDWPVKPEDA-ILSEKDLEAPEFSAAKGWFQ 184
Query: 181 Y 181
+
Sbjct: 185 F 185
>gi|331668735|ref|ZP_08369583.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli TA271]
gi|331063929|gb|EGI35840.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli TA271]
Length = 179
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T++Y E D G+ W D S+ I WPL +T P +S +D+ L+
Sbjct: 126 ETAEFLYKTTNYYHPESDRGIIWNDPSLKIEWPLDNT--PVLSARDKAHSILD 176
>gi|88705326|ref|ZP_01103037.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Congregibacter
litoralis KT71]
gi|88700416|gb|EAQ97524.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Congregibacter
litoralis KT71]
Length = 182
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +L + F D RG+F ++++++ KE G FVQDNHS S G +RGLH+Q
Sbjct: 8 LPGVYLLTPQVFGDERGFFVESWNAEAFKEAGFDLHFVQDNHSRSAQ-GILRGLHYQ-TA 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR AG ++D+AVD+RR+SPT G W + + A +++P GFAHGF
Sbjct: 66 HTQGKLVRVTAGSVYDVAVDLRRDSPTLGQWYGVTLDAKTQQMLWVPPGFAHGFYVTSEY 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK TD Y + +AW D + I WPL+D P++S KDQ
Sbjct: 126 ADFQYKCTDKYDPGSEVSIAWDDPELAIDWPLVDGKEPALSAKDQTGLAFRDAP 179
>gi|325169025|ref|YP_004285771.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
gi|325052900|dbj|BAJ83234.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
Length = 184
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + V+++ +F DSRGWFS+T++ L LG + FVQDNHS S GTIRGLH Q
Sbjct: 5 LVLPDVKLITPPRFADSRGWFSETWNQAKLAALGFTETFVQDNHSCSTRPGTIRGLHCQI 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRCI G I+D+AVDIR SP +G + + E+SA NG Q++IP GF HGF TLE
Sbjct: 65 APFAQGKLVRCIRGAIWDVAVDIRHGSPGFGRFAAAELSAANGAQLWIPPGFLHGFCTLE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TEV+YKVT Y + GV W D + + WP+ +S+KD LP L + + F
Sbjct: 125 PDTEVVYKVTAPYDKASERGVIWNDPDLALPWPVPGDGA-LLSDKDNLLPRLAEAEPWFT 183
>gi|326402834|ref|YP_004282915.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
gi|326403405|ref|YP_004283486.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
gi|325049695|dbj|BAJ80033.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
gi|325050266|dbj|BAJ80604.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
Length = 184
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ V ++ +F DSRGWFS+T++ L LG + FVQDNHS S GTIRGLH Q
Sbjct: 5 LDLPGVMLITPPRFADSRGWFSETWNQARLAALGFTETFVQDNHSSSTRPGTIRGLHCQL 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRCI G I+D+AVDIR SP++G + E+SA NG Q++IP GF HGF T E
Sbjct: 65 APFAQGKLVRCIRGAIWDVAVDIRHGSPSFGRHAAAELSAANGRQLWIPPGFLHGFCTTE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEV+YKVT Y + GV W D + + WP+ +S+KD LP L + + F
Sbjct: 125 PDTEVVYKVTAPYDKASERGVIWNDPDLALPWPVP-AGTALLSDKDNLLPRLAEAEPWF 182
>gi|254168004|ref|ZP_04874852.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aciduliprofundum boonei T469]
gi|289595933|ref|YP_003482629.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aciduliprofundum boonei T469]
gi|197623047|gb|EDY35614.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aciduliprofundum boonei T469]
gi|289533720|gb|ADD08067.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aciduliprofundum boonei T469]
Length = 191
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ + FED RG+F +TY ++ G++ F+QDNHS S G +RGLHFQR
Sbjct: 14 EMRDVIIIRPKVFEDERGFFMETYKKDDFEKNGIKGEFLQDNHSHSKY-GVLRGLHFQRE 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQAK+VRCI G IFD+AVD+R +SPT+G +V + +S N ++IP GFAHGF+ L
Sbjct: 73 PYAQAKIVRCIKGEIFDVAVDLRESSPTFGKYVGVVLSEKNKKMLFIPRGFAHGFLVLSE 132
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+V+YKV + Y+ E++ G+ W D ++I WP I P +SEKD+N P L ++ +
Sbjct: 133 EADVVYKVDNIYAPEYEGGLIWNDPDVNIEWP---EIKPILSEKDKNWPTLKELKNK 186
>gi|148259626|ref|YP_001233753.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium cryptum JF-5]
gi|148260219|ref|YP_001234346.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium cryptum JF-5]
gi|146401307|gb|ABQ29834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium cryptum JF-5]
gi|146401900|gb|ABQ30427.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium cryptum JF-5]
Length = 184
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ V ++ +F DSRGWFS+T++ L LG + FVQDNHS S GTIRGLH Q
Sbjct: 5 LDLPGVMLITPPRFADSRGWFSETWNQARLAALGFTETFVQDNHSSSTRPGTIRGLHCQL 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRCI G I+D AVDIR SP++G + E+SA NG Q++IP GF HGF T E
Sbjct: 65 APFAQGKLVRCIRGAIWDAAVDIRHGSPSFGRHAAAELSAANGRQLWIPPGFLHGFCTTE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEV+YKVT Y + GV W D + + WP+ +S+KD LP L + + F
Sbjct: 125 PDTEVVYKVTAPYDKASERGVIWNDPDLALPWPVP-AGTALLSDKDNLLPRLAEAEPWF 182
>gi|171184950|ref|YP_001793869.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoproteus neutrophilus
V24Sta]
gi|170934162|gb|ACB39423.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoproteus neutrophilus
V24Sta]
Length = 187
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 106/181 (58%), Gaps = 4/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ F D RG+F++ Y G+ FVQ + S S G +RGLH+Q
Sbjct: 9 LEIPDVILIEPVVFPDQRGFFAELYKRTDFLAGGVPYDFVQVSVSMSRR-GVVRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV + GR+ D+AVD+RR SP +G +V++E+SA+ ++IP GFAHGF LE
Sbjct: 68 KPAEQGKLVTVLRGRVLDVAVDVRRGSPWFGRYVAVELSADEPRLLWIPPGFAHGFQALE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
T +Y +T YS +H+ V W D + I WP+ D +SEKD+ P L + ++ FE
Sbjct: 128 DGTLFMYLMTKEYSPQHERCVRWDDPEVGIPWPIGD---AILSEKDRRCPPLREAETNFE 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|134297304|ref|YP_001121039.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia vietnamiensis
G4]
gi|134140461|gb|ABO56204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia vietnamiensis
G4]
Length = 181
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D RG+F ++++ + +G FVQDNHS S +RGLH+Q
Sbjct: 6 LAIPDVVLIEPQVFGDERGFFFESFNQGKFEQAIGRPVQFVQDNHSRSTRH-VLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FD+AVD+R++SPT+G WV ++A+N Q+++P GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVVQGAVFDVAVDLRKSSPTFGQWVGATLTADNKQQLWVPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ H+ +AW D +I I WP ++P +S KD+ + Q +
Sbjct: 124 SDTAEFLYKTTDYYAPAHERSIAWNDPAIGIQWP--AGLVPQLSAKDKAGVSIQQAE 178
>gi|256820076|ref|YP_003141355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga ochracea DSM
7271]
gi|256581659|gb|ACU92794.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga ochracea DSM
7271]
Length = 182
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D RG+F +++S + EL VFVQDN S S G +RGLHFQ+P
Sbjct: 7 KIEGVVIIEPQVFFDGRGYFFESFSQQRFNELVSPTVFVQDNESQSTY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVR + G + D+AVD+R++SPT+G + S+ ++ N Q +IP GFAHGF L
Sbjct: 66 PFAQAKLVRVVKGEVLDVAVDLRKDSPTFGQYESVILNEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK ++Y+ E + V W D +I I W L ++ +SEKD+ P L +
Sbjct: 126 EAIFQYKCDNYYAPESEGSVRWDDPTIGIDWRLPAEVI-QLSEKDKKAPLLVEAK 179
>gi|326798979|ref|YP_004316798.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobacterium sp. 21]
gi|326549743|gb|ADZ78128.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobacterium sp. 21]
Length = 182
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 82/177 (46%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + +ED+RG F +TY+ L +E G+ + FVQDN S S G +RGLH Q P
Sbjct: 8 IEGVVIIEPKIWEDNRGQFFETYNEALFRENGIDEKFVQDNQSVSCK-GALRGLHAQAGP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR I G + D+AVDIR+NSPT+G +E+S N ++IP GF HGF+ LE N
Sbjct: 67 HAQGKLVRVIKGSVIDVAVDIRKNSPTFGQTFHIELSEANAKMLWIPVGFLHGFVALEEN 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T YKVT Y ++ GV + D + +I WPL L +S+KD LP L I++PF
Sbjct: 127 TIFCYKVTGKYDKANEIGVRYNDPTFNIQWPLPQEEL-ILSDKDLQLPLLADINNPF 182
>gi|134094385|ref|YP_001099460.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Herminiimonas arsenicoxydans]
Length = 176
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
M I V +++ + F D RG+F ++++ + G FVQDNHS S G +RGLH+Q
Sbjct: 1 MAIPDVLLIEPKVFGDDRGFFFESFNEQRFAAAVGKTVEFVQDNHSRSAR-GVLRGLHYQ 59
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV +SA N Q++IP GFAHGF+
Sbjct: 60 IQQ-PQGKLVRVVSGEVFDVAVDIRKSSPTFGLWVGALLSAENKRQMWIPEGFAHGFVVT 118
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ H+ +AW D +I I WP+ + P +S KDQN L +
Sbjct: 119 SDSAEFLYKTTDYWAPGHERCIAWNDPAIGIEWPITGS--PILSGKDQNGTSLADAE 173
>gi|170743901|ref|YP_001772556.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium sp. 4-46]
gi|168198175|gb|ACA20122.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium sp. 4-46]
Length = 184
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 80/179 (44%), Positives = 116/179 (64%), Gaps = 2/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+++ + D+RGWFS+TY + LL + G+ D+F+QDN SFS GT+RG+HFQ
Sbjct: 7 SIPDVKLVVPARHGDARGWFSETYRADLLAQAGITDLFIQDNQSFSAQVGTVRGIHFQTH 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR ++G I D+AVD+RR SP+YG V++ + A NG Q+Y+P GF H F TLE
Sbjct: 67 PHAQGKLVRVVSGAILDVAVDLRRASPSYGRHVAVRLDAENGHQLYVPVGFGHAFCTLEP 126
Query: 122 NTEVIYKVT-DFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T + YKV+ +YS HD + W D + I WP+ +S KD+ P L + + F
Sbjct: 127 DTAIAYKVSGGYYSPAHDGALLWNDPDLGIDWPVSPE-AAILSAKDKAAPRLADLPAHF 184
>gi|119947064|ref|YP_944744.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychromonas ingrahamii 37]
gi|119865668|gb|ABM05145.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychromonas ingrahamii 37]
Length = 185
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE--LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V+I++ F D RG+F +T++ KL ++ G +FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKIIEPAVFGDERGFFMETWNQKLFEKEVTGKPTLFVQDNHSKSKK-GILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR I+G +FD+AVDIR++S T+G WV + +S N Q+++P GFAHGF+
Sbjct: 66 TENT-QGKLVRVISGEVFDVAVDIRKSSATFGQWVGVTLSEENKRQLWVPEGFAHGFLVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK TD+Y+ + + W D I I WP+ + + P +SEKD+N L
Sbjct: 125 SDEAEFVYKCTDYYNPTSEVSILWNDPDIGIEWPIKEEV-PLLSEKDKNAKLLK 177
>gi|189461252|ref|ZP_03010037.1| hypothetical protein BACCOP_01902 [Bacteroides coprocola DSM 17136]
gi|189432069|gb|EDV01054.1| hypothetical protein BACCOP_01902 [Bacteroides coprocola DSM 17136]
Length = 189
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 109/179 (60%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V I++ R F+D RG+F +++S + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IDGVVIIEPRLFKDDRGYFFESFSERDFNAQVRTVRFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR + G + D+AVDIR+ SPT+G V++E++ N Q +IP GFAHGF L
Sbjct: 67 FAQSKLVRVVKGAVLDVAVDIRKGSPTFGQHVAVELTEENHRQFFIPRGFAHGFSVLTDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D ++ I W + + +SEKD++ P L D F Y
Sbjct: 127 VIFQYKCDNFYAPQSEGAIAWDDPALGIDWKIPAEKV-ILSEKDKHHPLLKDADWLFSY 184
>gi|239628626|ref|ZP_04671657.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518772|gb|EEQ58638.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 187
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F D RG+F +TY+ +E GL VFVQDN S S G +RGLHFQ
Sbjct: 12 DIKGLYVIEPTVFRDERGYFVETYNQNDFREAGLDMVFVQDNQSMSVK-GVLRGLHFQ-K 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR + G +FD+AVD+R +S TYG W + +SA N Q YIP GFAHGF+ L
Sbjct: 70 QYPQGKLVRAVRGTVFDVAVDLRSDSETYGKWFGVVLSAENKKQFYIPEGFAHGFLVLSD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK TDFY + G+ W D + + WP+ D + +SEKD+ L + +
Sbjct: 130 EAEFAYKCTDFYHPGDEGGLKWDDPEVGVDWPVSDGMELIISEKDRKWGGLKDTFNKY 187
>gi|163748303|ref|ZP_02155585.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oceanibulbus indolifex
HEL-45]
gi|161378422|gb|EDQ02909.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oceanibulbus indolifex
HEL-45]
Length = 189
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V IL + D+RG+FS+++++K L + GL FVQDNHS S T+RGLHFQ PP
Sbjct: 8 LAGVLILTPVRHGDARGFFSESWNAKTLADAGLDYHFVQDNHSLSEAPNTLRGLHFQTPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVRC G +FD+AVDIR SP++G WV +++S NG Q+ IP GF HGF+T
Sbjct: 68 HAQAKLVRCGRGALFDVAVDIRHGSPSFGQWVGVDLSFENGRQLLIPAGFLHGFVTRVPM 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TE+IYK TD Y+ + D+ V W D I I W L P +S+KD + P L++I F Y+
Sbjct: 128 TEIIYKCTDTYAPDCDAAVRWDDPEIGIDWGLQ-GQTPILSKKDASAPLLSEIVPHFTYE 186
>gi|325105319|ref|YP_004274973.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pedobacter saltans DSM 12145]
gi|324974167|gb|ADY53151.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pedobacter saltans DSM 12145]
Length = 182
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 81/177 (45%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ + ++D RG+F ++Y+ KL KE G+ FVQDN S+S GT+RGLH Q P
Sbjct: 8 IKGLIVIEPKIWKDDRGYFYESYNEKLFKEAGIDTSFVQDNQSYSQK-GTLRGLHAQANP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR I G++ D+AVDIR++SPTYG + S+E+S N ++P GF HGF+TLE N
Sbjct: 67 FAQGKLVRVIQGKVLDVAVDIRKDSPTYGQYFSVELSGENFKMFWVPPGFLHGFITLEDN 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T YKVT Y + GV W D ++I W DT +SEKD+ L + +SPF
Sbjct: 127 TIFSYKVTGLYDKASELGVLWNDPDLNIDWKF-DTRQAILSEKDKQLISFKEFNSPF 182
>gi|224540703|ref|ZP_03681242.1| hypothetical protein BACCELL_05617 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517670|gb|EEF86775.1| hypothetical protein BACCELL_05617 [Bacteroides cellulosilyticus
DSM 14838]
Length = 190
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N+ + I++ R F+D RG+F +++S + +E + FVQDN S S G +RGLHFQ+P
Sbjct: 7 NVEGLVIIEPRLFKDERGYFFESFSQREFEEKVHKVNFVQDNESMSSY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + GR+ D+AVDIR+ SPTYG V++E+S +N LQ +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVVKGRVLDVAVDIRKGSPTYGEHVAVELSEDNHLQFFIPKGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK ++Y+ + D G++ D+ I I W + T +SEKD P L +SPFEY
Sbjct: 126 VAVFQYKCDNYYAPQADGGISILDEGIGIDWKIP-TDKAILSEKDTKHPLLRDFESPFEY 184
>gi|325300031|ref|YP_004259948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides salanitronis DSM
18170]
gi|324319584|gb|ADY37475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides salanitronis DSM
18170]
Length = 183
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/178 (43%), Positives = 106/178 (59%), Gaps = 2/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F D RG+F +++S + E FVQDN S S G +RGLHFQRPP
Sbjct: 8 IEGVVIIEPRLFRDERGYFFESFSQREFDEKVGHVTFVQDNESMSSY-GVMRGLHFQRPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ QAKLVRC+ G + D+AVDIR+ SPTYG V++E++ +N Q +IP GFAHGF L
Sbjct: 67 FTQAKLVRCVKGAVLDVAVDIRKGSPTYGKHVAVELTEDNHRQFFIPKGFAHGFAVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
YK +FY E + G++ DK + I W + +S KD P L ++PFE
Sbjct: 127 AVFQYKCDEFYHPEAEGGISILDKELGIDWRIPADGA-ILSGKDTAHPLLKDFETPFE 183
>gi|160940165|ref|ZP_02087510.1| hypothetical protein CLOBOL_05054 [Clostridium bolteae ATCC
BAA-613]
gi|158436745|gb|EDP14512.1| hypothetical protein CLOBOL_05054 [Clostridium bolteae ATCC
BAA-613]
Length = 210
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 105/180 (58%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F+D RG+F +TY+ KE GL VFVQDN S S G +RGLHFQ
Sbjct: 36 DIKGLYVIEPAVFKDERGYFMETYNQNDFKEAGLGMVFVQDNQSMSVK-GVLRGLHFQ-K 93
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR + G ++D+AVD+R +S TYG W + +SA N Q YIP GFAHGF+ L
Sbjct: 94 QYPQGKLVRVVRGTVYDVAVDLRSDSETYGKWFGVILSAENKKQFYIPEGFAHGFLVLSD 153
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TDFY + G+ W D I + WP+ + +S+KD+ L F++
Sbjct: 154 EAEFAYKCTDFYHPGDEGGLLWSDPEIGVDWPIEPDMQLIISDKDRKWSGLRD---TFKF 210
>gi|99077996|ref|YP_611255.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruegeria sp. TM1040]
gi|99034939|gb|ABF61993.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruegeria sp. TM1040]
Length = 182
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V+IL +F D+RG+FS++++ K + E GL FVQDNHS S D GTIRGLHFQ P
Sbjct: 7 KLSGVKILTPARFGDARGFFSESWNRKRMAEHGLDLEFVQDNHSMSADVGTIRGLHFQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVRC G +FD+ VDIR SPTYG W+ +E+SA NG Q+ +P GF HGF+T
Sbjct: 67 PHAQDKLVRCGQGVLFDVVVDIRNGSPTYGEWIGVELSAENGRQLLVPKGFLHGFITRAP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TE+IYK TD+Y+ E D GV W S I W P +SEKD P + SPF +
Sbjct: 127 MTEIIYKCTDYYAPECDGGVRWD--SCGIDWGFDG--QPILSEKDAAAPKFADLQSPFVF 182
>gi|332686303|ref|YP_004456077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Melissococcus plutonius ATCC
35311]
gi|332370312|dbj|BAK21268.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Melissococcus plutonius ATCC
35311]
Length = 190
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F DSRG+F+++YS + + GL FVQDNHS S + G +RGLHFQ+
Sbjct: 7 KLQDVKIIEMDVFGDSRGFFTESYSRQKFETFGLNFDFVQDNHSLSSEAGVLRGLHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR I G + D+ VDIR+NSPTYG W S +S N Q+ +P G+AHGF+TL
Sbjct: 67 KAAQTKLVRVITGALLDVIVDIRKNSPTYGKWESYILSEYNHRQLLVPKGYAHGFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
N YK ++Y+ E D G+A+ D + I WP+ D SEKD+ P + ++ F
Sbjct: 127 NVNFAYKCDNYYNDEADGGIAFDDPDLGIAWPM-DLNKAITSEKDKKHPTFKEFEQENLF 185
Query: 180 EY 181
Y
Sbjct: 186 VY 187
>gi|258517198|ref|YP_003193420.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM
771]
gi|257780903|gb|ACV64797.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM
771]
Length = 461
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 3/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N + +++T D+RGWF++TY+ G+ FVQDN S+S GT+RG+HFQ
Sbjct: 7 NFKGLFVIETNVHGDNRGWFTETYTKSKFAAQGIDTDFVQDNQSYSAQKGTLRGIHFQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ K++RC G I D VD+R+ S TY W S+E+SA N Q+YIP GF H F+T+
Sbjct: 67 PMAQTKMIRCTRGAIIDTVVDLRKGSDTYKQWYSIELSAENKKQMYIPKGFGHAFLTITE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ EV YKV ++YS E D + + D I I W + + P +S+KD N P L D+ F
Sbjct: 127 DVEVQYKVDEYYSKECDRSIKFNDPEIGIDWGIEN---PVLSQKDLNAPLLKDSDADF 181
>gi|167748151|ref|ZP_02420278.1| hypothetical protein ANACAC_02895 [Anaerostipes caccae DSM 14662]
gi|317472316|ref|ZP_07931644.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaerostipes sp. 3_2_56FAA]
gi|167652143|gb|EDR96272.1| hypothetical protein ANACAC_02895 [Anaerostipes caccae DSM 14662]
gi|316900273|gb|EFV22259.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 184
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 80/173 (46%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ F D RG+F +TY+ K +E GL FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLHIIEPAVFPDERGYFMETYNQKDFEEAGLGMTFVQDNQSMSVK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR + G++FD+AVD+R++S TYG W +E+SA N Q YIP GFAHGF+ L
Sbjct: 68 QYPQGKLVRVVRGKVFDVAVDLRKDSQTYGKWFGVELSAENKKQFYIPEGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TDFY + G+ W D I I WP + +SEKDQ L
Sbjct: 128 EAEFCYKCTDFYHPGDEGGIKWDDPDIGIEWPFEEGTELVISEKDQKWSGLKD 180
>gi|254168131|ref|ZP_04874978.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aciduliprofundum boonei T469]
gi|197622897|gb|EDY35465.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aciduliprofundum boonei T469]
Length = 191
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 82/177 (46%), Positives = 117/177 (66%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+ + FED RG+F +TY ++ G++ F+QDNHS+S G +RGLHFQR
Sbjct: 14 EIRDVIIITPKVFEDERGFFMETYKKDDFEKNGIKGEFLQDNHSYSKY-GVLRGLHFQRE 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQAK+VRCI G IFD+AVD+R +SPT+G +V + +S N ++IP GFAHGF+ L
Sbjct: 73 PYAQAKIVRCIKGEIFDVAVDLRESSPTFGKYVGVVLSEENKKMLFIPRGFAHGFLVLGE 132
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+V+YKV Y+ E++ G+ W D ++I WP I P +SEKD+N P L ++ +
Sbjct: 133 EADVMYKVDSVYAPEYEGGLIWSDPDVNIKWP---EIKPILSEKDKNWPTLRELKNK 186
>gi|264680360|ref|YP_003280270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni CNB-2]
gi|262210876|gb|ACY34974.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni CNB-2]
Length = 183
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 83/177 (46%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F +++ L + G F+QDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVFLIEPKVFGDARGFFLESFRQDLFNQATGTNHEFIQDNHSRSSK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P+AQ KLVR I+G +FD+AVDIRR+SPT+G WV E+SA N Q++IP GFAHGF+ L
Sbjct: 65 LSPHAQGKLVRVISGTVFDVAVDIRRSSPTFGQWVGAELSAENHRQLWIPPGFAHGFVVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T +Y+ E D G+ W D I I WP LD I S+SEKD+N P Q +
Sbjct: 125 SDTADFVYKTTAYYAPESDRGLLWNDPDIAIAWPQLD-IEFSLSEKDRNQPAFKQAE 180
>gi|225574462|ref|ZP_03783072.1| hypothetical protein RUMHYD_02537 [Blautia hydrogenotrophica DSM
10507]
gi|225038312|gb|EEG48558.1| hypothetical protein RUMHYD_02537 [Blautia hydrogenotrophica DSM
10507]
Length = 194
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +R+++ F D RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 22 IEGLRVIEPTVFGDDRGYFMETYNYNDFKEAGIDVEFVQDNQS-SSRKGVLRGLHFQI-N 79
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR ++G +FD+AVD+R S TYG W + +SA N Q +IP FAHGF+ L +
Sbjct: 80 YPQDKLVRVVSGEVFDVAVDLREGSATYGQWYGVVLSAENKKQFFIPKNFAHGFLVLSDH 139
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E YK TDFY + G+ W D I I WP+ + + SEKDQ L +
Sbjct: 140 AEFTYKCTDFYHPNDEGGLIWNDPDIGIQWPVPEGMELIFSEKDQKWGTLRDLKK 194
>gi|300866607|ref|ZP_07111295.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oscillatoria sp. PCC 6506]
gi|300335379|emb|CBN56455.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oscillatoria sp. PCC 6506]
Length = 182
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ R F D RG+F ++++ + E G++ FVQDNHS S +RGLH+Q
Sbjct: 7 EIPEVLIIEPRVFGDDRGFFFESFNHRAFAEKTGVKAEFVQDNHSKSAQ-NVLRGLHYQM 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR G IFD+AVDIR+NSPT+G WV +SA N Q+++P GFAHGF+ +
Sbjct: 66 QQ-PQGKLVRVAMGEIFDVAVDIRKNSPTFGQWVGYLLSAENKRQLWVPAGFAHGFLVVS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK T++Y+ EH+ + W D + I WPL D P +S KD++ L +
Sbjct: 125 EVAEVLYKTTEYYAPEHERCILWNDPDLAIAWPLGD-ATPILSAKDRSGQTLKTAE 179
>gi|332715608|ref|YP_004443074.1| dTDP-rhamnose-3,5-epimerase [Agrobacterium sp. H13-3]
gi|325062293|gb|ADY65983.1| dTDP-rhamnose-3,5-epimerase [Agrobacterium sp. H13-3]
Length = 189
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 83/180 (46%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ ++ + +F DSRG+FS+ + + +E FVQDN S S GT+RGLHFQ
Sbjct: 7 SISGLKKITPARFGDSRGYFSEVFKREWFRENVSDVEFVQDNESLSAQAGTVRGLHFQTQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVRC+ GR+ D+AVDIR SPT+G W ++E+S NG Q+++P GFAHGFMTL
Sbjct: 67 PFAQGKLVRCLRGRLLDVAVDIRTGSPTFGQWTAVELSPENGEQLWVPAGFAHGFMTLVD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T + YKVT YS +D GV W D +I I WP +S+KD P L+++ F Y
Sbjct: 127 DTVISYKVTAPYSAANDRGVKWDDPAIGINWP--KMDSCVLSDKDAKQPSLSELPEYFTY 184
>gi|224369621|ref|YP_002603785.1| RfbC2 [Desulfobacterium autotrophicum HRM2]
gi|223692338|gb|ACN15621.1| RfbC2 [Desulfobacterium autotrophicum HRM2]
Length = 182
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI V +++ + F D RG+F +T+ K+ + FVQDNHS S +RGLH+Q
Sbjct: 6 LNIPDVILMEPQVFGDHRGFFMETFRDDEFKQKVVHTTFVQDNHSKSSQ-NILRGLHYQI 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLV+ +G++FD+AVDIR++SP +G W +SA N +++P GFAHGF L
Sbjct: 65 KQ-PQGKLVQVTSGKVFDVAVDIRKSSPFFGKWSGATLSAENKKMLWVPPGFAHGFYVLS 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E YK TD+Y+ EH+ + W D SI I WP++ P +S+KD + L++ +
Sbjct: 124 DEAEFTYKCTDYYAPEHERSILWNDPSIAIDWPIIHGASPILSQKDIDGVTLDKAE 179
>gi|70733809|ref|YP_257449.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens Pf-5]
gi|68348108|gb|AAY95714.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens Pf-5]
Length = 181
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V I++ + F D RG+F +++++K E G+ FVQDNHS S G +RGLH+Q
Sbjct: 7 DLPGVLIIEPKVFGDERGFFYESFNAKAFAEATGIDAQFVQDNHSRSQK-GVLRGLHYQ- 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR G + D+AVDIRR+SP +G WV++ + A N Q+++P GFAHGF+ L
Sbjct: 65 LQNTQGKLVRVTQGEVLDVAVDIRRSSPHFGQWVAVRLYAQNHRQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + W D ++ I W L + P +S KDQ L + D
Sbjct: 125 DFAEFLYKTTDYYTPSAERCIRWDDPTLAIDWELDEP--PQLSAKDQAGALLTEAD 178
>gi|220925351|ref|YP_002500653.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium nodulans ORS
2060]
gi|219949958|gb|ACL60350.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium nodulans ORS
2060]
Length = 184
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+++ ++F D RGWFS+T+ + +L + G+ F+QDN SFS GT+RG+HFQ P
Sbjct: 8 IPEVKLVIPKRFGDERGWFSETFRADILAQAGITAPFIQDNQSFSAHPGTVRGIHFQTHP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVR +AG I D+AVD+RR SP+YG V++ + A G Q+YIP GF H F TLE N
Sbjct: 68 HAQAKLVRVLAGAILDVAVDLRRASPSYGRHVAVRLDAEAGHQLYIPIGFGHAFCTLEPN 127
Query: 123 TEVIYKV-TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T V YKV +Y+ EHD + W D ++ I WP+ +S+KD+ P L+ + + F
Sbjct: 128 TMVAYKVAGGYYNREHDGNLLWNDPALGIDWPVS-AEAAVLSDKDRAAPRLSDLPALF 184
>gi|20502683|gb|AAM22546.1|AF343089_3 putative dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas
hydrophila]
Length = 183
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +TY K G+ FVQDN S S +RGLHFQ+
Sbjct: 7 KIADLLIIEPKVFGDERGFFYETYQEARYKAAGITPDFVQDNRSRSTQ-NVLRGLHFQKT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV GR+FD+AVD+R +SPT+G S+ ++ N +Q YIP GFAHGF L
Sbjct: 66 K-PQGKLVTVTQGRVFDVAVDLRPDSPTFGQHESVLLTGENKIQFYIPPGFAHGFCVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ YK TD+Y +SG+ W D ++ I WPL P +S KD P L QI
Sbjct: 125 TADFQYKCTDYYDPTDESGLLWNDPALGIEWPL---TAPLLSPKDSVQPTLAQIRDN 178
>gi|297569754|ref|YP_003691098.1| Sigma 54 interacting domain protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296925669|gb|ADH86479.1| Sigma 54 interacting domain protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 181
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 78/177 (44%), Positives = 114/177 (64%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +L+ + F D RG+F ++++ ++ ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPEVMLLEPKVFGDERGFFYESFNRRVFEQATGVSGEFVQDNHSRS-RRGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PP AQ KLVR + G +FD+AVD+RR SPT G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 65 LPPKAQGKLVRVVQGEVFDVAVDLRRASPTCGQWVGVHLSAANKHQLWIPPGFAHGFVTL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ E++ + W D + I+WPL D P ++ KDQ Q +
Sbjct: 125 SETAEFLYKTTDYYAPEYERCIIWNDPDLAISWPLPDP--PQLAAKDQQGQPFRQAE 179
>gi|170748798|ref|YP_001755058.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
radiotolerans JCM 2831]
gi|170655320|gb|ACB24375.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
radiotolerans JCM 2831]
Length = 183
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 85/178 (47%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++F D+RGWFS+T+ + L G+ F+QDN SFS GT+RGLHFQ
Sbjct: 7 EIPDVKRIVLKRFGDARGWFSETFRADTLARAGIATPFIQDNQSFSAPQGTVRGLHFQIA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R + G I D+AVDIR +SPTYG +V++ + A G Q+YIP GFAHGF TL
Sbjct: 67 PRAQAKLIRVLQGAILDVAVDIRSDSPTYGKYVAVTLDAEKGEQLYIPHGFAHGFCTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ V YKV D+YS EHD + W D +I I WP+ +S+KD+ P L + S F
Sbjct: 127 DVMVTYKVDDYYSPEHDRALFWNDPAIGIPWPVSGE-AAILSDKDRRAPKLADLGSVF 183
>gi|29346748|ref|NP_810251.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338645|gb|AAO76445.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 182
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V I++ R F+D RG+F +++S + +E + FVQDN S S G +RGLHFQ+P
Sbjct: 7 NIEGVVIIEPRIFKDDRGYFFESFSQREFEEKVCKTTFVQDNESKSSY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR I G + D+AVDIR+ SPT+G +VS+E++ N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVIKGAVLDVAVDIRKGSPTFGQYVSVELTGENHRQFFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK +FYS + + +AW D ++I W + + +SEKD P L + F
Sbjct: 126 EVIFQYKCDNFYSPQSEGAIAWNDPDLNIDWRIPAEKV-VLSEKDSKHPRLKDWQNMF 182
>gi|302348457|ref|YP_003816095.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidilobus saccharovorans
345-15]
gi|302328869|gb|ADL19064.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidilobus saccharovorans
345-15]
Length = 185
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++K + F D RG+F +T+ +K ++ G++ VQ+N S+S G IRGLH+QR
Sbjct: 8 LDIPDVVLVKPKVFRDQRGYFMETFVAKAFEQAGVKFNVVQENQSYSRR-GVIRGLHYQR 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQAK+VR + G I+D+AVDIR SPT+G V++ +S +NG +YIP GFAHGF L
Sbjct: 67 GQWAQAKIVRAVKGEIYDVAVDIRPWSPTFGKHVAVRLSEDNGYALYIPRGFAHGFQVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V+Y V + Y+ + + G+ W D I I+WP+ P +SEKD P L +
Sbjct: 127 EYAIVVYLVDNDYAPQAEGGIRWDDSDIAISWPISG---PVLSEKDARWPTLREA 178
>gi|21672269|gb|AAM74476.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas hydrophila]
Length = 183
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +TY K G+ FVQDN S S +RGLHFQ+
Sbjct: 7 KIADLLIIEPKVFGDERGFFYETYQEARYKAAGITPDFVQDNRSRSTQ-NVLRGLHFQKT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV GR+FD+AVD+R +SPT+G S+ ++ N +Q YIP GFAHGF L
Sbjct: 66 K-PQGKLVTVAQGRVFDVAVDLRPDSPTFGQHESVLLTGENKIQFYIPPGFAHGFCVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ YK TD+Y +SG+ W D ++ I WPL P +S KD P L QI
Sbjct: 125 TADFQYKCTDYYDPTDESGLLWNDPALGIEWPL---TAPLLSPKDSVQPTLAQIRDN 178
>gi|46015557|pdb|1RTV|A Chain A, Rmlc (Dtdp-6-Deoxy-D-Xylo-4-Hexulose 3,5-Epimerase)
Crystal Structure From Pseudomonas Aeruginosa, Apo
Structure
gi|112491446|pdb|2IXJ|A Chain A, Rmlc P Aeruginosa Native
gi|118138550|pdb|2IXH|A Chain A, Rmlc P Aeruginosa With Dtdp-Rhamnose
gi|118138551|pdb|2IXH|B Chain B, Rmlc P Aeruginosa With Dtdp-Rhamnose
Length = 184
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + R F D RG+F ++Y+ + +E G FVQDNHS S G +RGLH+Q
Sbjct: 9 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSAR-GVLRGLHYQ 67
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR G +FD+AVD+RR SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 68 IRQ-AQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVL 126
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TDF++ EH+ + W D + I WPL D P +SEKD+ D
Sbjct: 127 SEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFADADC 182
>gi|94311664|ref|YP_584874.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cupriavidus metallidurans
CH34]
gi|93355516|gb|ABF09605.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Cupriavidus metallidurans CH34]
Length = 184
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 112/175 (64%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D+RG+F ++++ K E GL FVQDNHS S G +RGLH+Q
Sbjct: 10 IPDVMIIEPKVFGDARGFFFESFNQKAFGEATGLDLEFVQDNHSRSAK-GVLRGLHYQIQ 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + GR+FD+AVDIR+ S T+G WV +E+S +N Q ++P GFAHGF+ L
Sbjct: 69 Q-PQGKLVRVVRGRVFDVAVDIRKQSATFGKWVGVELSEDNHRQFWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ + + +AW D I I WP ++ ++P +S KDQ L+ +
Sbjct: 128 SADFLYKTTDYYAPQFERTIAWNDPEIGIEWPQMN-VVPLLSAKDQAGVSLSSAE 181
>gi|56752004|ref|YP_172705.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
6301]
gi|81300907|ref|YP_401115.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
7942]
gi|56686963|dbj|BAD80185.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
6301]
gi|81169788|gb|ABB58128.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
7942]
Length = 183
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 78/175 (44%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++++ EL GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LADVCILEPKVFGDDRGFFLESFNARTFAELTGLNVTFVQDNHSRSQQ-GVLRGLHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC+ G IFD+AVD+R++SP +G WV +SA+N Q+++P GFAHGF+ L
Sbjct: 67 Q-AQGKLVRCVVGEIFDVAVDLRQSSPQFGQWVGERLSADNHRQLWVPPGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ EV+YK TD+Y+ H+ + W D +I I WPL P +S KD L + +
Sbjct: 126 SAEVLYKTTDYYAPTHERSLRWDDPAIAIDWPLAAGQQPQLSAKDAAAVNLLEAE 180
>gi|313203692|ref|YP_004042349.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Paludibacter propionicigenes
WB4]
gi|312443008|gb|ADQ79364.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paludibacter propionicigenes
WB4]
Length = 182
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I+K R F D+RG+F ++Y+ K + F QDN S S G IRGLH+Q P
Sbjct: 8 IKDLVIIKPRVFADARGFFFESYNEAAYKAANINIHFCQDNQSKSSY-GVIRGLHYQLLP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+Q KLV + G ++D+AVD+R++SPT+G W +E++ N LQ IP GFAHGF L
Sbjct: 67 QSQTKLVSVVQGAVWDVAVDLRKDSPTFGQWYGVELTEENHLQFIIPQGFAHGFSVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK DFYS + + G+ + D ++ I W + +S+KD P L + F
Sbjct: 127 AVFTYKCDDFYSPQLERGIMYNDPALAIDWKIP-ADKAIISDKDTKHPLLKDAELNF 182
>gi|49081796|gb|AAT50298.1| PA5164 [synthetic construct]
Length = 182
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + R F D RG+F ++Y+ + +E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSAR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR G +FD+AVD+RR SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 65 IRQ-AQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TDF++ EH+ + W D + I WPL D P +SEKD+ D
Sbjct: 124 SEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFADADC 179
>gi|320352680|ref|YP_004194019.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfobulbus propionicus DSM
2032]
gi|320121182|gb|ADW16728.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfobulbus propionicus DSM
2032]
Length = 183
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 116/175 (66%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F ++Y+ ++ ++L GL FVQDNHS S G +RGLH+Q P
Sbjct: 9 IADLLIIEPKIFGDERGFFYESYNERVFRQLTGLTVNFVQDNHSRS-TRGVLRGLHYQLP 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRC+ G +FD+AVDIR+ SPT+G WV L +SA+N Q +IP GFAHGF+ L
Sbjct: 68 PAAQGKLVRCVVGEVFDVAVDIRKQSPTFGRWVGLHLSADNKRQFWIPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y ++D G+ W D + ITWPL DT P +SEKD P +
Sbjct: 128 TAEFLYKTTEYYQPQYDRGIRWNDPDLAITWPLHDT--PQLSEKDCTAPLFTAAE 180
>gi|192360654|ref|YP_001983891.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellvibrio japonicus Ueda107]
gi|190686819|gb|ACE84497.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellvibrio japonicus Ueda107]
Length = 182
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 115/174 (66%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I + + F D RG+F +++S + +E GL+ FVQDNHS S G +RGLH+Q P
Sbjct: 8 IPDVKIFEPKVFGDERGFFFESFSQRAFEEATGLKREFVQDNHSKS-SKGVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR G +FD+AVDIR++SPT+G WV + +SA+N Q++IP GFAHGF+TL
Sbjct: 67 PMAQGKLVRVAQGEVFDVAVDIRKSSPTFGQWVGVILSADNKRQLWIPEGFAHGFLTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS H+ + W D +++I WP DT +S KD+ P L Q
Sbjct: 127 TAEFLYKTTNYYSPSHEGSIIWSDPTLNIQWP--DTSAVQISTKDRTAPILKQA 178
>gi|332701642|ref|ZP_08421730.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio africanus str.
Walvis Bay]
gi|332551791|gb|EGJ48835.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio africanus str.
Walvis Bay]
Length = 181
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V ++K F D RG+F +T+ ++ + G+ FVQDN S S G +RGLHFQ
Sbjct: 7 DIEGVLLIKPNAFGDHRGFFLETFQAQRYGQAGIGLPFVQDNLSRSRQ-GILRGLHFQ-R 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLV GR+FD+AVDIR SPT+G W + N Q+++ G AHGF +
Sbjct: 65 TYPQGKLVSVTRGRVFDVAVDIRPASPTFGKWYGAVLDDENHHQLWVAPGLAHGFCVMSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y E + + W D I I WP+ P++S+KD P L ++
Sbjct: 125 TADFTYKCTDYYHPEDEGCLRWNDPDIGIDWPV---QSPTLSDKDAKAPSLREL 175
>gi|112491444|pdb|2IXI|A Chain A, Rmlc P Aeruginosa With Dtdp-Xylose
gi|112491445|pdb|2IXI|B Chain B, Rmlc P Aeruginosa With Dtdp-Xylose
gi|114794832|pdb|2IXK|A Chain A, Rmlc P Aeruginosa With Dtdp-4-Keto Rhamnnose (The Product
Of The Reaction)
gi|114794833|pdb|2IXK|B Chain B, Rmlc P Aeruginosa With Dtdp-4-Keto Rhamnnose (The Product
Of The Reaction)
Length = 184
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + R F D RG+F ++Y+ + +E G FVQDNHS S G +RGLH+Q
Sbjct: 9 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSAR-GVLRGLHYQ 67
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR G +FD+AVD+RR SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 68 IRQ-AQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVL 126
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TDF++ EH+ + W D + I WPL D P +SEKD+ D
Sbjct: 127 SEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFADADC 182
>gi|16765424|ref|NP_461039.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|141363|sp|P26394|RMLC_SALTY RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|7767043|pdb|1DZR|A Chain A, Rmlc From Salmonella Typhimurium
gi|7767044|pdb|1DZR|B Chain B, Rmlc From Salmonella Typhimurium
gi|7767045|pdb|1DZT|A Chain A, Rmlc From Salmonella Typhimurium
gi|7767046|pdb|1DZT|B Chain B, Rmlc From Salmonella Typhimurium
gi|581655|emb|CAA40118.1| rmlC [Salmonella enterica]
gi|16420626|gb|AAL20998.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|261247309|emb|CBG25134.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267994148|gb|ACY89033.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158655|emb|CBW18167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|323130417|gb|ADX17847.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332989029|gb|AEF08012.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 183
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +EL G + FVQDNHS S +RGLHFQR
Sbjct: 9 IPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 68 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 128 YAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFS--QLPELSAKDAAAPLLDQA 179
>gi|108805902|ref|YP_645839.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rubrobacter xylanophilus DSM
9941]
gi|108767145|gb|ABG06027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rubrobacter xylanophilus DSM
9941]
Length = 183
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 106/173 (61%), Gaps = 5/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ + F D RG+F ++++ + +E GL + FVQDN S S G +RGLHFQ P
Sbjct: 7 ELPGVLVVEPQVFGDERGFFMESFNGRRYREAGLPERFVQDNLSLS-RRGVLRGLHFQHP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G +FD+AVD+RR SPT+G WV L +S N Q+YIP GFAHGF+ L
Sbjct: 66 R-GQGKLVSVLRGEVFDVAVDVRRGSPTFGRWVGLSLSEENRRQLYIPPGFAHGFVVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK T++Y+ E + V W D I I WP+ + P +SEKD+ P L +
Sbjct: 125 AALFFYKCTEYYAPECERTVLWSDPEIGIGWPVEE---PVLSEKDRKAPALRE 174
>gi|298480819|ref|ZP_06999014.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
gi|298272842|gb|EFI14408.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
Length = 190
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 83/187 (44%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V I++ R F D RG+F +++S + E FVQDN S S G +RGLHFQ
Sbjct: 7 NIEGVVIIEPRLFMDDRGYFFESFSQREFDEKVHPVKFVQDNESMSSY-GVMRGLHFQTM 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY Q+KLVRC+ G + D+AVDIR+ SPTYG V++E++ N Q +IP GFAHGF L
Sbjct: 66 PYCQSKLVRCVEGAVLDVAVDIRKGSPTYGQHVAVELTEENHRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ +HD G++ D+S+ I W + T +SEKD P L +SPF Y
Sbjct: 126 TAVFQYKCDNFYAPQHDGGISILDESLGICWRMP-TGKAILSEKDTKHPLLKDFESPFLY 184
Query: 182 DGLPLLS 188
G L
Sbjct: 185 -GEDLYK 190
>gi|167991009|ref|ZP_02572108.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168242167|ref|ZP_02667099.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194451405|ref|YP_002046144.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261750|ref|ZP_03161824.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|194409709|gb|ACF69928.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197240005|gb|EDY22625.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205330504|gb|EDZ17268.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205338551|gb|EDZ25315.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|312913085|dbj|BAJ37059.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224742|gb|EFX49805.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
Length = 182
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +EL G + FVQDNHS S +RGLHFQR
Sbjct: 8 IPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 127 YAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFS--QLPELSAKDAAAPLLDQA 178
>gi|312960467|ref|ZP_07774976.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens WH6]
gi|311285352|gb|EFQ63924.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens WH6]
Length = 179
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ R + D+RG+F ++Y + +++G++ FVQDNHS S G +RGLHFQR
Sbjct: 8 LPGVLIIEPRVYGDARGFFLESYQQQRYRDIGIEQPFVQDNHSRSAQ-GVLRGLHFQRSR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR G ++D+ VDI S T G V++E++A + LQ+++P G+AHGF L
Sbjct: 67 -PQGKLVRVTRGAVYDVVVDIDPASATCGEHVAVELTAEDHLQLWVPPGYAHGFCVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ YK TD Y + + G+ W D + I WPL P +SEKDQ P L
Sbjct: 126 ADFQYKCTDLYDPKDEGGLLWNDPDLGIAWPL---GSPLLSEKDQRHPRLR 173
>gi|288816201|gb|ADC54925.1| RmlC [Escherichia coli]
Length = 182
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/176 (44%), Positives = 115/176 (65%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++S T+G WV + +SA N Q++IP G+AHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSSTFGKWVGVNLSAENKRQLWIPEGYAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y + D G+ W D SI+I+WP+ + +S KD P L +I+
Sbjct: 126 ETAEFLYKTTNYYHPQSDRGIKWDDPSINISWPVDSQV--LLSAKDNKHPPLTKIE 179
>gi|206901649|ref|YP_002250032.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dictyoglomus thermophilum
H-6-12]
gi|206740752|gb|ACI19810.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dictyoglomus thermophilum
H-6-12]
Length = 194
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 120/181 (66%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++T+ F D+RG+F +TY+ K +E+GL+ FVQDN S S G +RGLHFQ
Sbjct: 11 IKDLVLIETKIFRDNRGFFMETYNQKEFEEIGLKLNFVQDNLSLSKK-GVLRGLHFQF-K 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KL+R I G+++D+AVD+R NSPT+G W +E++ NGL YIP GFAHGF+TLE +
Sbjct: 69 YPQGKLIRVIKGKVYDVAVDLRINSPTFGKWYGVELTGENGLAFYIPEGFAHGFLTLEDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
T YK T+ Y E+DSG+ W D IDI WPL +SEKD+NLP L I + +
Sbjct: 129 TYFFYKCTEIYYPEYDSGIIWNDPDIDIKWPLEKVEELIISEKDKNLPKLKDIIDKLKEE 188
Query: 183 G 183
G
Sbjct: 189 G 189
>gi|323697532|ref|ZP_08109444.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio sp. ND132]
gi|323457464|gb|EGB13329.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio desulfuricans
ND132]
Length = 189
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +L + F+D RG+F ++Y++ +ELG+ F+QDNH++S D G +RG HFQRP
Sbjct: 7 EFPGLLVLVPQVFQDERGFFLESYNANHFRELGITCTFIQDNHAYSRDVGVLRGFHFQRP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLV G + D+ VD+R SPTYG W + +SA N +++IP GF H ++T+
Sbjct: 67 PQAQAKLVWVTRGAVLDVVVDLRIGSPTYGRWQHVILSAANFKRMFIPRGFGHAYVTIMP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL-DTILPSVSEKDQNLPFLNQIDSPFE 180
+TE YKV Y+ + G+AW D I + W P +SEKD+ L L +SPF
Sbjct: 127 DTEFQYKVDAPYAPALEGGLAWDDPDIGMDWDAALHGQEPILSEKDRRLSGLAGFESPFT 186
Query: 181 YDG 183
++G
Sbjct: 187 FEG 189
>gi|37678487|ref|NP_933096.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio vulnificus
YJ016]
gi|37197227|dbj|BAC93067.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio vulnificus
YJ016]
Length = 185
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 108/177 (61%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I ++I++ F D RG+F +T+ +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPEIKIIEPMVFGDERGFFMETWHQARFEELVTGKPTRFVQDNHSKS-KQGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ Q KLVR ++G +FD+AVDIR+ SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 M-QHTQGKLVRVVSGEVFDVAVDIRQGSPTFGQWVGVYLSAENKRQMWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y + + +AW D I I WP+ P +S+KD + P L++
Sbjct: 125 SEEAEFVYKCTDYYHPQSEQCIAWNDTVIGIDWPIPIGKGPMLSKKDASAPNLSECK 181
>gi|58580417|ref|YP_199433.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58425011|gb|AAW74048.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 185
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG+F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFVQSNVSTS-AKGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVD+R SP +G W ++ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ + P +S KD PFL + + +
Sbjct: 126 AVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISN---PLLSAKDAAAPFLADVPA----E 178
Query: 183 GLPLLSL 189
LP+ +
Sbjct: 179 RLPVYTP 185
>gi|30248687|ref|NP_840757.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosomonas europaea ATCC
19718]
gi|30180282|emb|CAD84589.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosomonas europaea ATCC
19718]
Length = 181
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F D RG+F ++++ +E +G + FVQDNHS S +RGLH+Q
Sbjct: 8 IPEVVLIEPKVFGDERGFFFESFNQARFEETVGREINFVQDNHSRSVK-NVLRGLHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVVQGEVFDVAVDLRKSSPTFGRWVGQVLSAENKHQLWIPEGFAHGFVVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ H+ + W D ++I WPL I P +S KD ++ +
Sbjct: 126 TAEFLYKTTDYYAPAHERCLLWNDPVLNIQWPL--GIAPVLSAKDTQGKPFSEAE 178
>gi|220924209|ref|YP_002499511.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium nodulans ORS
2060]
gi|219948816|gb|ACL59208.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium nodulans ORS
2060]
Length = 184
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+++ ++F D RGWFS+T+ + +L + G+ F+QDN SFS GT+RG+HFQ P
Sbjct: 8 IPEVKLVIPKRFGDERGWFSETFRADILAQAGITAPFIQDNQSFSAHPGTVRGIHFQTHP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVR +AG I D+AVD+RR SP+YG V++ + A G Q+YIP GF H F TLE N
Sbjct: 68 HAQAKLVRVLAGAILDVAVDLRRASPSYGRHVAVRLDAEAGHQLYIPIGFGHAFCTLEPN 127
Query: 123 TEVIYKV-TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T V YKV +YS EHD + W D ++ I WP+ +S+KD+ P L+ + + F
Sbjct: 128 TMVAYKVAGGYYSREHDGNLLWNDPALGIDWPVS-AEAAVLSDKDRAAPRLSDLPALF 184
>gi|168259602|ref|ZP_02681575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168466248|ref|ZP_02700118.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194442370|ref|YP_002041364.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194401033|gb|ACF61255.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|195631440|gb|EDX50000.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|205351188|gb|EDZ37819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 182
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + ++L G + FVQDNHS S +RGLHFQR
Sbjct: 8 IPDVLILEPKVFGDERGFFFESYNQQTFEKLIGRKITFVQDNHSKS-KKNVLRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 ANAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 127 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLDQA 178
>gi|289668426|ref|ZP_06489501.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 185
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG+F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFVQSNVSTS-AKGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVD+R SP +G W ++ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ + P +S KD PFL + + +
Sbjct: 126 AVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISN---PLLSAKDAAAPFLADVPA----E 178
Query: 183 GLPLLSL 189
LP+ +
Sbjct: 179 RLPVYTP 185
>gi|15895598|ref|NP_348947.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium acetobutylicum
ATCC 824]
gi|15025340|gb|AAK80287.1|AE007734_1 DTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium acetobutylicum
ATCC 824]
gi|325509746|gb|ADZ21382.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium acetobutylicum EA
2018]
Length = 185
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 107/178 (60%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ V I++T F D+RG+F +TY+ + KE GL VFVQDN S S G +RGLHFQ
Sbjct: 10 DIDGVYIIETGVFGDNRGYFMETYNYEEFKEAGLDMVFVQDNQSKSRK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R S TYG WV + +S N Q YIP GFAHGF+ L
Sbjct: 68 KHTQGKLVRVVKGEVFDVAVDLREGSKTYGKWVGVTLSEENKKQFYIPEGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK TDFY + G+ W D + I WP+ D SEKDQ P L++ F
Sbjct: 128 EAEFCYKCTDFYDPTSEGGILWNDPEVGIKWPIDDIENLIFSEKDQKWPKLSECGIKF 185
>gi|330994213|ref|ZP_08318141.1| dTDP-4-dehydrorhamnose 3-5-epimerase [Gluconacetobacter sp. SXCC-1]
gi|329758680|gb|EGG75196.1| dTDP-4-dehydrorhamnose 3-5-epimerase [Gluconacetobacter sp. SXCC-1]
Length = 189
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI + +L +FED RG+F++TY++ LKE+G+ + FVQDNHS S G +RGLH Q P
Sbjct: 7 NIKGLVLLTPPRFEDDRGYFTETYNAARLKEIGITEPFVQDNHSLSRQRGVVRGLHCQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVRC G I+D+ VDIR SPT+G WV +SA NG Q++IP GF HGF TL
Sbjct: 67 PHAQGKLVRCTRGSIWDVGVDIRAGSPTFGQWVGETLSAENGAQLWIPAGFLHGFCTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
N EV YK TDF++ E + V W D + I WP+ VS KD + +D F
Sbjct: 127 NAEVQYKCTDFWNRECERSVRWDDPLLAIDWPVA-AGEAIVSAKDAQALAFSSVDDWFT 184
>gi|15600357|ref|NP_253851.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa PAO1]
gi|107104265|ref|ZP_01368183.1| hypothetical protein PaerPA_01005339 [Pseudomonas aeruginosa PACS2]
gi|116053311|ref|YP_793635.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218894264|ref|YP_002443134.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa
LESB58]
gi|254238136|ref|ZP_04931459.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa C3719]
gi|313110227|ref|ZP_07796123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa 39016]
gi|81622016|sp|Q9HU21|RMLC_PSEAE RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|9951466|gb|AAG08549.1|AE004929_4 dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa PAO1]
gi|27262962|emb|CAC82199.1| dTDP-4-keto-6-deoxy-D-glucose 3,5 epimerase [Pseudomonas
aeruginosa]
gi|115588532|gb|ABJ14547.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170067|gb|EAZ55578.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa C3719]
gi|218774493|emb|CAW30310.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa
LESB58]
gi|310882625|gb|EFQ41219.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa 39016]
Length = 181
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + R F D RG+F ++Y+ + +E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSAR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR G +FD+AVD+RR SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 65 IRQ-AQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TDF++ EH+ + W D + I WPL D P +SEKD+ D
Sbjct: 124 SEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFADADC 179
>gi|150017459|ref|YP_001309713.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium beijerinckii
NCIMB 8052]
gi|149903924|gb|ABR34757.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium beijerinckii
NCIMB 8052]
Length = 191
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D+RG+F + Y+ K + G FVQDN S S G +RGLHFQ
Sbjct: 10 KIKGLYIIEPKVFGDNRGYFMENYNKKQFEAAGFNMNFVQDNESKSVK-GVLRGLHFQ-R 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++Q KL+R G +FD+AVD+R S TYG W + +S N Q Y+P GFAHGF+ +
Sbjct: 68 EHSQGKLIRVTKGEVFDVAVDLRNGSKTYGNWEGIVLSEENKKQFYVPEGFAHGFLVISN 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK TD+Y+ E++ G+ W D I++ WPL + +SEKD+ L+++D
Sbjct: 128 EAILNYKCTDYYAKEYECGIMWNDPDINVNWPLENIENVILSEKDKANSMLSELD 182
>gi|119485672|ref|ZP_01619947.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lyngbya sp. PCC 8106]
gi|119456997|gb|EAW38124.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lyngbya sp. PCC 8106]
Length = 182
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 79/176 (44%), Positives = 109/176 (61%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ + F D RG+F ++++ K + G+ FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPEVLILEPKVFGDERGFFFESFNQKSFADQTGVTTEFVQDNHSRSRQ-GVLRGLHYQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KL+R +AG IFD+AVDIR++SPT+G WV ISA N Q ++P FAHGF+ L
Sbjct: 66 EQV-QGKLLRVVAGEIFDVAVDIRKSSPTFGQWVGCIISAENKRQFWVPPKFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD+Y+ +H+ + W D + I WP+ D I P +S KDQ+ L D
Sbjct: 125 EVAEVLYKTTDYYAPQHERSILWNDPDLGIEWPV-DGITPVLSAKDQDGKTLKTAD 179
>gi|325279646|ref|YP_004252188.1| Sigma 54 interacting domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324311455|gb|ADY32008.1| Sigma 54 interacting domain protein [Odoribacter splanchnicus DSM
20712]
Length = 183
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ V IL+ R F D RG+F +++S + E + FVQDN S S G +RGLH+Q P
Sbjct: 7 SISDVVILEPRVFGDERGYFFESFSQREFNEQVAEVTFVQDNESKSSY-GVVRGLHYQLP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY QAKLVR + G + D+ VD+R+NS T+G V++ +S N Q +IP GFAHGF L
Sbjct: 66 PYTQAKLVRVVEGEVLDVVVDLRKNSATFGKHVAVVLSGENKRQFFIPKGFAHGFAVLSP 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK ++Y+ +++SG+ + D ++ I W + + + +S KD+ L++ F +
Sbjct: 126 QAVFQYKCDNYYAPQYESGIQFDDPALGIDWKIPEAEM-ILSAKDRKHKGLSEA---FVF 181
Query: 182 DG 183
+G
Sbjct: 182 EG 183
>gi|325281623|ref|YP_004254165.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Odoribacter splanchnicus DSM
20712]
gi|324313432|gb|ADY33985.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Odoribacter splanchnicus DSM
20712]
Length = 190
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F D RG+F +++S + + + VFVQDN S S G +RGLHFQ+PP
Sbjct: 8 IPGVVIVQPRIFGDERGYFFESFSQRDFERQVCKTVFVQDNESKSCY-GVVRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR + GR+ D+AVDIR+ SPT+G +VS+E++ N Q +IP GFAHGF L
Sbjct: 67 YAQSKLVRVVKGRVLDVAVDIRKGSPTFGKYVSVELTEENKRQFFIPRGFAHGFAVLSTE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ E + +AW D + I W + +SEKD++ P L F+Y+
Sbjct: 127 AVFQYKCDNFYAPESEGALAWDDPDLGIDWRIP-AAKVILSEKDRHHPCLKDACDWFDYN 185
>gi|148556919|ref|YP_001264501.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingomonas wittichii RW1]
gi|148502109|gb|ABQ70363.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingomonas wittichii RW1]
Length = 185
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 101/184 (54%), Positives = 129/184 (70%), Gaps = 1/184 (0%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V+++ TR+F D RGWFS+TY G + FVQDNHS+S GT+RG+HFQ PP+AQ
Sbjct: 3 VKLIHTRRFGDDRGWFSETYHRPRWTADGAAEEFVQDNHSYSKHAGTLRGIHFQAPPHAQ 62
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
AKLVRCI GRI D AVD+R SPTYG V+ E+SA+NG Q+YIP GF H F+TLE ++EV
Sbjct: 63 AKLVRCIRGRILDYAVDLRAGSPTYGRHVAAELSADNGDQLYIPVGFGHAFVTLEPDSEV 122
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLP 185
IYKV+D Y+ + D G++W ++ I WPL P +S+KD+ LP L DSPF YDG P
Sbjct: 123 IYKVSDVYAPDVDGGISWDCPTLAIDWPLPPGG-PVLSDKDRTLPHLADWDSPFAYDGAP 181
Query: 186 LLSL 189
L L
Sbjct: 182 LRPL 185
>gi|117624234|ref|YP_853147.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli
APEC O1]
gi|237704492|ref|ZP_04534973.1| RmlC [Escherichia sp. 3_2_53FAA]
gi|300936658|ref|ZP_07151562.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 21-1]
gi|115513358|gb|ABJ01433.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli
APEC O1]
gi|226900858|gb|EEH87117.1| RmlC [Escherichia sp. 3_2_53FAA]
gi|300458239|gb|EFK21732.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 21-1]
gi|323951790|gb|EGB47664.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli H252]
Length = 182
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 80/176 (45%), Positives = 115/176 (65%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++S T+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSSTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y + D G+ W D SI+I+WP+ + +S KD P L +I+
Sbjct: 126 ETAEFLYKTTNYYHPQSDRGIKWDDPSINISWPVDSQV--LLSAKDNKHPPLTKIE 179
>gi|166713451|ref|ZP_02244658.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 185
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG+F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFVQSNVSTS-AKGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVD+R SP +G W ++ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENNKQFWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ D P +S KD PFL + + +
Sbjct: 126 AVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISD---PLLSAKDAAAPFLADVPA----E 178
Query: 183 GLPLLSL 189
LP+ +
Sbjct: 179 RLPVYTP 185
>gi|205353237|ref|YP_002227038.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857530|ref|YP_002244181.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|205273018|emb|CAR37966.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206709333|emb|CAR33673.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326623928|gb|EGE30273.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628324|gb|EGE34667.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 183
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +EL G + FVQDNHS S +RGLHFQR
Sbjct: 9 IPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 68 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 128 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLHQA 179
>gi|254243955|ref|ZP_04937277.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa 2192]
gi|296392019|ref|ZP_06881494.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa PAb1]
gi|126197333|gb|EAZ61396.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa 2192]
Length = 181
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + R F D RG+F ++Y+ + +E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSAR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR G +FD+AVD+RR SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 65 IRQ-AQGKLVRATLGEVFDVAVDLRRGSPTFGHWVGERLSAENKRQMWIPAGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TDF++ EH+ + W D + I WPL D P +SEKD+ D
Sbjct: 124 SEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFADADC 179
>gi|161613226|ref|YP_001587191.1| hypothetical protein SPAB_00936 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551040|ref|ZP_02344795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|198246059|ref|YP_002216181.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|161362590|gb|ABX66358.1| hypothetical protein SPAB_00936 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197940575|gb|ACH77908.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205324010|gb|EDZ11849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 182
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +EL G + FVQDNHS S +RGLHFQR
Sbjct: 8 IPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 127 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLHQA 178
>gi|152987706|ref|YP_001351220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa PA7]
gi|150962864|gb|ABR84889.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas aeruginosa PA7]
Length = 181
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 107/177 (60%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + R F D RG+F ++Y+ + +E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSAR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR G +FD+AVD+RR SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-AQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TDF++ E++ + W D + I WPL + P +SEKD+ + D
Sbjct: 124 SEYAEFLYKTTDFWAPEYERSIVWNDPDLKIDWPLRE--APLLSEKDRQAKAFAEAD 178
>gi|154247475|ref|YP_001418433.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthobacter autotrophicus
Py2]
gi|154161560|gb|ABS68776.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthobacter autotrophicus
Py2]
Length = 188
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 111/180 (61%), Gaps = 2/180 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ V ++ R+F D+RG+F +TY L G+ FVQDN S S GT+RGLH Q
Sbjct: 7 LDLPEVILVTPRRFGDARGYFCETYVKPLYAANGIVADFVQDNESLSALPGTVRGLHMQA 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQAKLVR ++G IFD+AVD+R+ SPTYG W ++A G Q+++P GFAHGF TL
Sbjct: 67 PPFAQAKLVRVLSGAIFDVAVDVRKGSPTYGRWAGARLTAEGGEQLFVPQGFAHGFCTLA 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T V YKV FY + G+ W D + I W +S+KD+ LP L DSPF
Sbjct: 127 PDTRVAYKVDAFYDRASECGIIWNDPDLAIDWRFTGET--ILSDKDRILPRLKDFDSPFV 184
>gi|320530257|ref|ZP_08031327.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas artemidis F0399]
gi|320137690|gb|EFW29602.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas artemidis F0399]
Length = 184
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ VRIL+ + F D+RGWF +++S K +++ G+ FVQDNHSFS + GT+RGLH+Q
Sbjct: 7 KLPGVRILEPQVFGDARGWFMESWSQKKMEDAGIHVDFVQDNHSFSVERGTLRGLHYQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R G +FD+AVDIRR SPTY W+ +E+SA N Q++IP GFAHGF+TL
Sbjct: 67 PMAQAKLLRVSRGAVFDVAVDIRRGSPTYAQWIGIELSAENYRQLFIPRGFAHGFITLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ-IDSPFE 180
N EV YK + Y+ + D + W D +I + WP +SEKD P L + I+ F
Sbjct: 127 NVEVQYKADNLYAPDCDGNIRWDDPAIGVAWPFTP---VVLSEKDAIAPSLAERIELNFV 183
Query: 181 Y 181
Y
Sbjct: 184 Y 184
>gi|150006431|ref|YP_001301175.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus ATCC
8482]
gi|237712178|ref|ZP_04542659.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 9_1_42FAA]
gi|237726325|ref|ZP_04556806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D4]
gi|254881652|ref|ZP_05254362.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 4_3_47FAA]
gi|265751869|ref|ZP_06087662.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_33FAA]
gi|294777048|ref|ZP_06742506.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus PC510]
gi|319643037|ref|ZP_07997670.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_40A]
gi|149934855|gb|ABR41553.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus ATCC
8482]
gi|229434851|gb|EEO44928.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides dorei 5_1_36/D4]
gi|229453499|gb|EEO59220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 9_1_42FAA]
gi|254834445|gb|EET14754.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 4_3_47FAA]
gi|263236661|gb|EEZ22131.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_33FAA]
gi|294449106|gb|EFG17648.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides vulgatus PC510]
gi|317385318|gb|EFV66264.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_40A]
Length = 189
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V IL+ R F D+RG+F +++S + +E + FVQDN SFS G +RGLHFQ+PP
Sbjct: 8 IDGVFILEPRIFNDARGYFFESFSGREFEEKVCRTTFVQDNESFSTY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR I G + D+AVDIR+ SPT+G V++E++ N Q +IP GFAHGF L
Sbjct: 67 FTQSKLVRVIKGAVLDVAVDIRKGSPTFGKHVAVELTGENHRQFFIPRGFAHGFAVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +Y+ + + G+AW D + I W L + +S+KD+ P L + F+++
Sbjct: 127 VLFQYKCDHYYAPQSEGGIAWDDPDLGIDWRLPADKV-ILSDKDKKHPRLKDYQTDFDFN 185
>gi|289577889|ref|YP_003476516.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter italicus
Ab9]
gi|289527602|gb|ADD01954.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter italicus
Ab9]
Length = 183
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 81/174 (46%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++T FED+RG+F ++Y+ K K G+ VFVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLYIIETGVFEDNRGYFMESYNYKDFKAAGIDAVFVQDNQSKSKK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R+NS TYG WV + +S N Q YIP GFAHGF+ L
Sbjct: 68 KHPQGKLVRVLKGEVFDVAVDLRKNSKTYGKWVGVILSDKNKRQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TDFY + + G+ W D I+I WPL +SEKD+ P L +
Sbjct: 128 EAEFFYKCTDFYYPDDEGGIIWNDPDINIQWPLEGIEEVILSEKDKKWPRLRDL 181
>gi|13476272|ref|NP_107842.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Mesorhizobium loti
MAFF303099]
gi|14027033|dbj|BAB53987.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Mesorhizobium loti
MAFF303099]
Length = 183
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 85/176 (48%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I+ V + ++ D+RG+F +TY+++ + G+ VFVQDNHS+S G +RGLH+Q
Sbjct: 6 LGIDGVLEIVPKRHGDARGFFMETYNAERFSQAGIDLVFVQDNHSYSATAGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R I G I D+AVDIRR S T+G WV+ EISA G QI +P GFAHGF+TL
Sbjct: 66 EPRAQDKLLRVIRGSILDVAVDIRRGSKTFGKWVACEISAEKGNQILVPKGFAHGFVTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+TEV+YKVTD YS EHD V + D I I WP +S+KD P L + +
Sbjct: 126 PDTEVLYKVTDTYSPEHDRSVRFDDPVIGIEWP-SVAGGFQLSDKDLKAPVLAEAE 180
>gi|168481307|gb|ACA24796.1| RmlC [Escherichia coli]
Length = 183
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 78/174 (44%), Positives = 113/174 (64%), Gaps = 3/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKWSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK T++Y+ ++ + W DK + I WP T+ +S+KD P L++
Sbjct: 126 ETAEFVYKTTNYYAPGYEGSIIWNDKILSIDWP-ELTLEYILSDKDLKAPILSE 178
>gi|254286303|ref|ZP_04961262.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae AM-19226]
gi|150423718|gb|EDN15660.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae AM-19226]
Length = 182
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 111/177 (62%), Gaps = 6/177 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPAVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TDFY+ + + + W D +I I WP+ +T P +SEKD L ++
Sbjct: 125 SDEAEFVYKCTDFYNPKAEHSIRWDDDTIGIKWPITET--PLLSEKDSVGKLLKDVE 179
>gi|198284962|ref|YP_002221283.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218666255|ref|YP_002427647.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198249483|gb|ACH85076.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218518468|gb|ACK79054.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 182
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++ + F D RG+F ++++ + GL FVQDNHS S G +RGLH+Q
Sbjct: 6 LSIPEVLLIAPKVFGDVRGFFMESWNRRAFAAAGLDLDFVQDNHSRSQQ-GVLRGLHYQI 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVD+RR+SP +G W +SA N +++P GFAHGF L
Sbjct: 65 HQ-PQGKLVRVVSGAVFDVAVDLRRSSPHFGRWAGATLSAENQQMLWVPPGFAHGFYVLS 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ + +YK T+FY+ E + V W D I I WPL+D P ++ KD L+ ++
Sbjct: 124 ESADFLYKTTEFYAPEAERCVIWNDPDIAIDWPLVDGKPPLLATKDAAGLPLSASET 180
>gi|213052828|ref|ZP_03345706.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213419660|ref|ZP_03352726.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213425548|ref|ZP_03358298.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213620978|ref|ZP_03373761.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650448|ref|ZP_03380501.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852951|ref|ZP_03382483.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289807299|ref|ZP_06537928.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|289827039|ref|ZP_06545847.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 182
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +E +G + FVQDNHS S +RGLHFQR
Sbjct: 8 IPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 127 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLHQA 178
>gi|83645209|ref|YP_433644.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hahella chejuensis KCTC 2396]
gi|83633252|gb|ABC29219.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hahella chejuensis KCTC 2396]
Length = 179
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 78/175 (44%), Positives = 103/175 (58%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V I++ R F D RG+F +TY E G++ FVQDNHS S G +RGLHFQ+
Sbjct: 7 KLSGVVIIEPRVFGDHRGFFMETYQVARYRNEAGIELEFVQDNHSRSGR-GVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR G +FD+AVD+R+ S TYG W + +S N LQ YIP GFAHGF L
Sbjct: 66 TK-PQGKLVRVTQGEVFDVAVDLRKGSSTYGQWEGVILSGENHLQFYIPPGFAHGFCVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y + G+ W D I I WP+ P++S+KD LP L +I
Sbjct: 125 ETADFQYKCTDYYDPADEGGLIWNDPDIGIVWPIE---SPNLSQKDLALPTLREI 176
>gi|16761026|ref|NP_456643.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29141278|ref|NP_804620.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|25292478|pir||AC0767 dTDP-4-dehydrorhamnose 3,5-epimerase [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503324|emb|CAD02457.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29136904|gb|AAO68469.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 183
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +E +G + FVQDNHS S +RGLHFQR
Sbjct: 9 IPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 68 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 128 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLHQA 179
>gi|115503061|gb|ABI98984.1| RmlC [Escherichia coli]
gi|156539326|gb|ABU80589.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella flexneri]
gi|156539341|gb|ABU80599.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella flexneri]
gi|168481278|gb|ACA24770.1| RmlC [Shigella flexneri 6]
gi|320185804|gb|EFW60558.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri CDC 796-83]
Length = 185
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 78/179 (43%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E +YK T++Y + D G+ W D + I WP ++ +S KD L+ + F
Sbjct: 126 ETAEFLYKTTNYYHPDSDRGIVWNDPILSIKWPTIEHNNYILSIKDARAKELHNMKELF 184
>gi|77456517|ref|YP_346022.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens
Pf0-1]
gi|77380520|gb|ABA72033.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens
Pf0-1]
Length = 193
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V I++ + F D RG+F +++++K ++ GL FVQDNHS S G +RGLH+Q
Sbjct: 19 DLPGVLIIEPKVFGDERGFFYESFNAKAFQDATGLDTQFVQDNHSRSQK-GVLRGLHYQ- 76
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR AG + D+AVDIRR+SP +G WV++ +SA+N Q+++P GFAHGF+ L
Sbjct: 77 LENTQGKLVRVTAGEVLDVAVDIRRSSPHFGKWVAVRLSADNHRQLWVPEGFAHGFVVLS 136
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + W D + I W L + P +S KDQ L D
Sbjct: 137 EFAEFLYKTTDYYNPSSERSIRWDDPDLGIDWQLDE--APKLSAKDQAAALLKDAD 190
>gi|168236252|ref|ZP_02661310.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194734639|ref|YP_002115183.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194710141|gb|ACF89362.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197290480|gb|EDY29835.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 182
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +E +G + FVQDNHS S +RGLHFQR
Sbjct: 8 IPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 127 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLHQA 178
>gi|26988513|ref|NP_743938.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida KT2440]
gi|24983280|gb|AAN67402.1|AE016367_2 dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida KT2440]
Length = 182
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 81/177 (45%), Positives = 116/177 (65%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I V + + F D RG+F +++++++ E+ GLQ FVQDNHS S G +RGLH+Q
Sbjct: 6 LDIPEVVLFTPKVFGDERGFFYESFNARVFSEVTGLQPDFVQDNHSRS-VKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P+AQ KLVR + G +FD+AVDIRR+S T+G WV +SA N Q++IP GFAHGF+TL
Sbjct: 65 LAPHAQGKLVRVVQGEVFDVAVDIRRSSTTFGKWVGAVLSAENKNQLWIPPGFAHGFVTL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TDFYS + + +AW D ++ I WP+ +PS+S KDQ L +
Sbjct: 125 SETAEFLYKTTDFYSPQCERCIAWNDPAVGIEWPI--DSVPSLSGKDQLGVALADAE 179
>gi|296114300|ref|ZP_06832954.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter hansenii
ATCC 23769]
gi|295979061|gb|EFG85785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter hansenii
ATCC 23769]
Length = 186
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 75/179 (41%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ +F D+RG+FS+TY+ + + G+ FVQDN S S G +RGLH Q
Sbjct: 6 LAIPDVILVTPARFGDTRGFFSETYNLHRMADAGIHAPFVQDNQSLSRHKGVVRGLHCQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC G I+D+AVD R SPTYG WV+ E+S +N Q+++P GF HGF+T+
Sbjct: 66 APHAQGKLVRCTRGAIWDVAVDARMGSPTYGQWVAAELSEDNWSQLWLPPGFLHGFVTMS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NTEV YK T Y + V W + I WP+ +S+KD+ P F
Sbjct: 126 DNTEVQYKCTSLYDKASERAVIWNCPELKIDWPIA-QEDAILSDKDKVAPGFAAAHGWF 183
>gi|197248407|ref|YP_002147052.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212110|gb|ACH49507.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 182
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +E +G + FVQDNHS S +RGLHFQR
Sbjct: 8 IPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 127 YAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFS--QLPELSAKDAAAPLLHQA 178
>gi|56413002|ref|YP_150077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197361930|ref|YP_002141567.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56127259|gb|AAV76765.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197093407|emb|CAR58862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 180
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +E +G + FVQDNHS S +RGLHFQR
Sbjct: 6 IPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 65 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 125 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLHQA 176
>gi|153214711|ref|ZP_01949556.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae 1587]
gi|29725987|gb|AAO88920.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
gi|124115147|gb|EAY33967.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae 1587]
Length = 181
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG--LQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T+ + +EL FVQDNHS S T+RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWQQRKFEELVTCKPTQFVQDNHSKS-KKATLRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR I+G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF
Sbjct: 66 -TKNAQGKLVRVISGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWIPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D I + WPL +SEKD P L+
Sbjct: 125 SDEAEFVYKCTDYYNPNAEGTIVWSDPDIGVEWPLDQYTDLIISEKDSAAPLLSDA 180
>gi|75758500|ref|ZP_00738621.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228904956|ref|ZP_04069008.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
4222]
gi|74494027|gb|EAO57122.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228854698|gb|EEM99304.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
4222]
Length = 194
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I++ K D RG+F +TY+ K + L LQ FVQDN S S GTIRGLH+Q P
Sbjct: 14 LDGVFIIELDKCSDKRGYFIETYNKKKFELLDLQGEFVQDNQSLSVHTGTIRGLHYQLNP 73
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ K+V CI+G I+D+ VDIR+ SPTYG W +S N + +P GFAHGF T+E N
Sbjct: 74 KAQMKVVSCISGSIYDVVVDIRKGSPTYGQWFGTILSEYNNRLLTVPKGFAHGFCTIEPN 133
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T V YKV ++YS H+ G+ W D++I I WP T P +SEKD+ LP L + F Y
Sbjct: 134 TIVQYKVDEYYSPNHEEGILWNDETIGIFWP---TNQPILSEKDRKLPRLKDTNINFVY 189
>gi|332532393|ref|ZP_08408273.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038260|gb|EGI74706.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 181
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+I++ + F D RG+F +T+ ++L + + FVQ+NHS S G +RGLH+Q
Sbjct: 7 SIPDVKIIEPQVFGDERGFFMETFRTELFNQHCGERTFVQENHSKSAH-GILRGLHYQTQ 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR G ++D+AVD+R++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 NT-QGKLVRVTQGEVYDVAVDMRQSSPTFGQWVGVLLSAENKRQLWVPEGFAHGFYVTTE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD Y+ + + W D +++I WPL++ LP +S KD+
Sbjct: 125 TAEFVYKCTDVYNPNVEVSIKWDDPTLNIDWPLVEGKLPQLSAKDEAGLSFKNAPK 180
>gi|127514631|ref|YP_001095828.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella loihica PV-4]
gi|126639926|gb|ABO25569.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella loihica PV-4]
Length = 182
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V++L+ + F D RG F +T+ + KE + FVQ+N S S GT+RGLH+Q
Sbjct: 7 SIPDVKLLEPQVFGDERGCFFETFRQQWFKEHLMDLDFVQENQSHSLQ-GTLRGLHYQ-L 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KL+R ++G IFD+ VD+RR SP++G W +SA+N Q+++P GFAHGF +
Sbjct: 65 RQPQGKLIRVVSGEIFDVCVDLRRTSPSFGQWTGHHLSADNKHQLWVPPGFAHGFYVVSP 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK TD+Y+ + + W D ++ I WPLL T P +S KD+ + D
Sbjct: 125 EAHCFYKCTDYYAPNDEHSIRWDDDTLAIDWPLLSTQSPLLSPKDKAAGTFAEAD 179
>gi|295110606|emb|CBL24559.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus obeum A2-162]
Length = 189
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 100/176 (56%), Gaps = 2/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ++++ F D RG+F +TY+ K G+ FVQDN S S G +RGLHFQ
Sbjct: 11 IEGLKVITPTVFGDERGYFMETYNYNDYKAAGIDMEFVQDNQS-SSRKGVLRGLHFQI-N 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR ++G +FD+AVD+R S TYG W + +SA N Q +IP FAHGF+ L
Sbjct: 69 YPQDKLVRVVSGEVFDVAVDLREGSATYGQWYGVLLSAENKKQFFIPKNFAHGFVVLSDT 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E YK TDFY + G+A+ D I + WP+ + + +S+KDQ + +
Sbjct: 129 AEFAYKCTDFYHPNDEGGLAYNDPDIGVEWPIPEGMELILSDKDQKWGSFKEYTAN 184
>gi|254478574|ref|ZP_05091948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Carboxydibrachium pacificum
DSM 12653]
gi|214035503|gb|EEB76203.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Carboxydibrachium pacificum
DSM 12653]
Length = 185
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++T FED+RG+F ++Y+ + K G+ VFVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLYIIETGIFEDNRGYFMESYNYRDFKAAGIDAVFVQDNQSKSKK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R+NS TYG WV + +S N Q YIP GFAHGF+ L
Sbjct: 68 KHPQGKLVRVLKGEVFDVAVDLRKNSKTYGKWVGVILSDKNKRQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E YK TDFY + + G+ W D I+I WPL +SEKD+ P L ++
Sbjct: 128 EAEFFYKCTDFYYPDDEGGIIWNDPDINIQWPLEGIEEVILSEKDKKWPRLRDLE 182
>gi|62955960|gb|AAY23336.1| RmlC [Shigella boydii]
Length = 185
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 115/173 (66%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S + G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-NKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +S+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSSENMRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T +Y E DSG+ W DK+I I WPL + P +SEKD NL
Sbjct: 126 DTAEFLYKTTKYYHPESDSGIIWNDKNIGICWPLREK--PIISEKDSNLLPFA 176
>gi|307293848|ref|ZP_07573692.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobium chlorophenolicum
L-1]
gi|306879999|gb|EFN11216.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobium chlorophenolicum
L-1]
Length = 181
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + F D RG+F +++++ +E GL FVQDNHS S G +RGLHFQ P
Sbjct: 8 IPDLLIIEPKVFGDDRGFFMESWNADRFREQGLDLTFVQDNHSRS-AKGVLRGLHFQ-NP 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR AGR++D+AVD+RR+S +G WV +E+SA N ++P GFAHGF+TLE
Sbjct: 66 NPQGKLVRVTAGRVWDVAVDLRRSSRHFGKWVGVELSAENRRMFWVPPGFAHGFLTLEDG 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T+ +YK T Y H+ + W D ++ + WPL D I P +S KD L +I+
Sbjct: 126 TDFLYKCTGRYDPSHEHSLLWNDPTVGVDWPL-DGIEPQLSGKDVAGKPLAEIE 178
>gi|266622170|ref|ZP_06115105.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium hathewayi DSM
13479]
gi|288866122|gb|EFC98420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium hathewayi DSM
13479]
Length = 184
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 77/173 (44%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ F DSRG+F +TY+ KE GL VFVQDN S S G +RGLHFQ
Sbjct: 10 DIKGLYVIEPTVFPDSRGYFMETYNQNDFKEAGLNMVFVQDNQSMSVK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R +S TYG W + +SA N Q YIP GFAHGF+ L
Sbjct: 68 QFPQGKLVRVVRGSVFDVAVDLRSDSETYGKWFGVLLSAENKKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TDFY + G+ W D I I WP+ + + +S+KDQ +
Sbjct: 128 EAEFAYKCTDFYHPGDEGGILWSDPEIGIDWPIEEGMELIISDKDQKWSGIRD 180
>gi|257061453|ref|YP_003139341.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8802]
gi|256591619|gb|ACV02506.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8802]
Length = 181
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ F D RG+F +++++K +E G+ FVQDNHS S +RGLH+Q
Sbjct: 7 KIPDVMIIEPNVFGDDRGFFYESFNAKKFAEETGINPNFVQDNHSKSGK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G + DIAVDIR++SP++G WV ++ N Q ++P GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVVVGEVLDIAVDIRKSSPSFGQWVGCILNTENKRQFWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ +++ + W D I+I W + D P +S+KDQ L +
Sbjct: 125 DVAEFLYKTTDYYAPQYERSILWNDPDINIDWQITDE--PILSKKDQLASRLKDAE 178
>gi|162149146|ref|YP_001603607.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545110|ref|YP_002277339.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787723|emb|CAP57319.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532787|gb|ACI52724.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 183
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/179 (44%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I + +L R+F D RG+FS+TY+ + + + G+ FVQDNHS S G IRGLH Q
Sbjct: 6 LSIPDILLLTPRRFADERGFFSETYNLRTMAQAGIDVAFVQDNHSLSRQRGVIRGLHCQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRC G I+D+AVD R+ SP++G WV+ E+S NG Q++IP GF HGF TL
Sbjct: 66 PPHAQGKLVRCTRGAIWDVAVDARQGSPSFGRWVAAELSEENGSQLWIPPGFLHGFCTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
N EV YK TD + + + V W + I WP+ +SEKD P + + F
Sbjct: 126 ENAEVQYKCTDLWDRDCERSVRWNSPDLAIAWPVAPEDA-VLSEKDAAAPDFSTVRDWF 183
>gi|311278965|ref|YP_003941196.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterobacter cloacae SCF1]
gi|308748160|gb|ADO47912.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterobacter cloacae SCF1]
Length = 184
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/176 (45%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL---GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ V+I++ F D RG+F +T++ K +EL G+ FVQDNHS S G +RGLHFQ
Sbjct: 8 LEEVKIIEPTVFGDDRGFFMETWNQKKFEELVTNGVSTKFVQDNHSKSKK-GILRGLHFQ 66
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G +FD+AVD+R+NSPT G WV +E+SA N Q+++P GFAHGF L
Sbjct: 67 -SENTQGKLVRVGVGAVFDVAVDVRKNSPTLGKWVGVELSAENKRQLWVPEGFAHGFYVL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E IYK TDFY+ + + + W D +I + WPL +T+ +SEKD N L
Sbjct: 126 SDTAEFIYKCTDFYNPKAEHSIIWNDPAIGVDWPLDETVPLILSEKDMNGVTLKMF 181
>gi|157961246|ref|YP_001501280.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella pealeana ATCC
700345]
gi|157846246|gb|ABV86745.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella pealeana ATCC
700345]
Length = 189
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-----GLQDVFVQDNHSFSFDCGTIRGL 56
+I V + + + F D+RG+F +T+ + L + FVQ+N S S +RGL
Sbjct: 8 SIPDVLLFEPQVFGDARGFFMETFRQSEFEALFAEVGMVCPSFVQENMSRSAK-NVLRGL 66
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q Q KL+R AG IFD+AVD+R+ S TYG W +SA N LQ+YIP GFAHGF
Sbjct: 67 HYQ-TLQPQGKLIRVTAGSIFDVAVDLRKGSKTYGQWFGQTLSAENRLQLYIPPGFAHGF 125
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
+TL + ++IYK TD+Y+ EH+ +AW D ++I WP+ + + P +SEKD
Sbjct: 126 LTLSDHADIIYKCTDYYAPEHERTIAWNDPQLNIQWPIGEGVKPILSEKDGKA 178
>gi|332879845|ref|ZP_08447534.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332682222|gb|EGJ55130.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 182
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D RG+F +++S + E FVQDN S S G +RGLHFQ+P
Sbjct: 7 KIEGVVIIEPQVFFDGRGYFFESFSQQRFNEQVAPITFVQDNESKSSY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q+KLVR + G++ D+AVD+RRNSPT+G + S+ ++ N Q ++P GFAHGF L
Sbjct: 66 PFTQSKLVRVVKGKVLDVAVDLRRNSPTFGQYESVLLTEENKRQFFVPQGFAHGFAVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK ++Y+ + + V W D SI+I W L +SEKD+N P L +++ F
Sbjct: 126 EAIFQYKCDNYYAPQSEGSVRWDDPSINIDWQLP-IADVLLSEKDKNAPLLEALETIF 182
>gi|255020605|ref|ZP_05292668.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidithiobacillus caldus ATCC
51756]
gi|254969990|gb|EET27489.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidithiobacillus caldus ATCC
51756]
Length = 182
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/177 (40%), Positives = 107/177 (60%), Gaps = 2/177 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ R F D+RG+F ++++ + GL FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPEVLLITPRVFGDARGFFLESWNRRSFAAAGLDLDFVQDNHSRSQR-GVLRGLHYQI 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR +AG +FD+AVD+RR+SP +G WV +SA+N +++P GFAHGF+ L
Sbjct: 65 RQ-PQGKLVRVVAGEVFDVAVDLRRSSPHFGRWVGARLSADNAQMLWVPPGFAHGFLVLS 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD+Y E + + W D S+ + WPL P+++ KD L Q++
Sbjct: 124 EQADFLYKTTDYYLPEAERCLRWDDPSVGVQWPLAPGSQPTLAAKDAAGSLLAQLEC 180
>gi|110640208|ref|YP_680418.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cytophaga hutchinsonii ATCC
33406]
gi|110282889|gb|ABG61075.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cytophaga hutchinsonii ATCC
33406]
Length = 181
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 5/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + V ++ F D RG+F +TY+ + + GL FVQDNHS S G +RGLHFQ+
Sbjct: 6 LELKDVILISPNVFGDERGFFMETYNKAVFSKAGLDREFVQDNHSKS-SAGVLRGLHFQK 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVR G I+DI VD+R+NS TY + + + + +Y+P GFAHGF+++E
Sbjct: 65 NPYAQGKLVRATKGSIWDIVVDLRKNSATYKKAIKILLDDKDKRMLYVPEGFAHGFISIE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EV YK T+ Y+ E + G+ W D + I W + + P VS KDQ LP+L I+S
Sbjct: 125 D-CEVQYKCTNLYNKESEGGIRWNDPELGIDWGIEN---PVVSTKDQELPYLKDIESALN 180
Query: 181 Y 181
+
Sbjct: 181 F 181
>gi|291548483|emb|CBL21591.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus sp. SR1/5]
Length = 185
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 105/176 (59%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I +++++ F DSRG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 11 DIEGLKVIEPTVFGDSRGYFMETYNYNDFKEAGIDVEFVQDNQS-SSRYGVLRGLHFQI- 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR + G +FD+AVD+R S T+G W + +SA N Q +IP GFAHGF+ L
Sbjct: 69 SYPQDKLVRVVNGEVFDVAVDLREGSKTFGKWYGVVLSAENKKQFFIPKGFAHGFLVLSE 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
N E YK +DFY + G+ W DK I++ WP+ + + S+KDQ + +
Sbjct: 129 NAEFTYKCSDFYHPNDEGGLIWNDKDINVEWPIPEGMELIFSDKDQKWGSFEEYKN 184
>gi|119898165|ref|YP_933378.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azoarcus sp. BH72]
gi|119670578|emb|CAL94491.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azoarcus sp. BH72]
Length = 181
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +L+ + F DSRG+F +++++ + GL VFVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVLMLEPQVFGDSRGFFLESFNANRFETATGLPPVFVQDNHSRSSR-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR GR+FD+AVD+RR+S T+ WV E+S N Q++IP GFAHGF+ L
Sbjct: 66 SQPQGKLVRVARGRVFDVAVDLRRSSATFAQWVGTELSDENQRQMWIPPGFAHGFVVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD+Y+ E + V W D ++ I WP+ + P +S KDQ+ L + +
Sbjct: 126 TADFLYKTTDYYAPEAERCVLWNDPALGIEWPISEP--PLLSAKDQSGKLLAEAEC 179
>gi|331086187|ref|ZP_08335269.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406346|gb|EGG85860.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 183
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ ++++ F D RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIDGLKVITPTVFGDERGYFMETYNYNDYKEAGIDMEFVQDNQSCSKK-GVLRGLHFQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR ++G ++D+AVD+R S TYG W + +SA N Q +IP FAHGF+ L
Sbjct: 68 NYPQDKLVRVVSGEVYDVAVDLREGSETYGKWYGVLLSAENKKQFFIPKNFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ E YK TDFY + G+AW D I + WP+ + + ++SEKDQ + ++
Sbjct: 128 SAEFAYKCTDFYHPNDEGGLAWNDPDIGVEWPIPEGMELTISEKDQKWTGIKELKK 183
>gi|303230617|ref|ZP_07317367.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Veillonella atypica
ACS-049-V-Sch6]
gi|302514672|gb|EFL56664.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Veillonella atypica
ACS-049-V-Sch6]
Length = 178
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/172 (46%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ R F D RG+F ++++ ++L ELG+ FVQDN SFS + GT+RG+HFQ
Sbjct: 10 KLKGVYILEPRVFGDHRGYFFESWNERVLHELGIDINFVQDNQSFSAEQGTLRGIHFQTG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVRC+ G + D+AVD+R +S TY W+S+E+SA+N Q+ IP GF HGF+TL
Sbjct: 70 EWAQAKLVRCVRGAVLDVAVDLRADSSTYLQWISVELSADNKRQLLIPRGFGHGFVTLTP 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ E +YK +FY VE + G W D +I + W + + P +S+KD+ LPF+
Sbjct: 130 DVEFLYKADNFYHVEAEGGYRWNDPTIGVEWGIEN---PILSDKDKQLPFIK 178
>gi|168229416|ref|ZP_02654474.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469870|ref|ZP_03075854.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456234|gb|EDX45073.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205335685|gb|EDZ22449.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 182
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + ++L G + FVQDNHS S +RGLHFQR
Sbjct: 8 IPDVLILEPKVFGDERGFFFESYNQQTFEKLIGRKITFVQDNHSKS-KKNVLRGLHFQRG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 ANAQGKLVRCAIGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++YS + + W D++I I WP LP +S KD P L+Q
Sbjct: 127 YAEFLYKATNYYSPSSEGSILWNDETIGIEWPFS--QLPELSAKDAAAPLLHQA 178
>gi|323936932|gb|EGB33215.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli E1520]
Length = 178
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 79/175 (45%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S + G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-NKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y E D G+ W D+ I+I WP + P +S+KD+ ++++
Sbjct: 126 ETAEFLYKTTNYYHPESDRGIIWNDQDINIIWP--NIAEPLLSDKDKLAKNISEL 178
>gi|84489349|ref|YP_447581.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosphaera stadtmanae DSM
3091]
gi|84372668|gb|ABC56938.1| predicted dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosphaera
stadtmanae DSM 3091]
Length = 185
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 78/178 (43%), Positives = 107/178 (60%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ V I++ F D+RG+F +TY ++ G+ FVQDN S S G +RGLHFQ
Sbjct: 10 SIDGVYIIEPTVFGDNRGYFMETYQKEVFSRAGISSEFVQDNQSKSKK-GVLRGLHFQ-R 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G +FD+AVD+R NS TYG WV + +S+ N Q YIP GFAHGF+ L
Sbjct: 68 TQPQGKLVRVIKGEVFDVAVDLRSNSSTYGKWVGVILSSENKKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK TD+Y + + G+ W D++I I WPL D +S+KD+ L + + F
Sbjct: 128 EAEFTYKCTDYYKADDEDGIKWDDETIGIKWPLDDVDEIILSDKDKLWKSLEETNVDF 185
>gi|157376144|ref|YP_001474744.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sediminis HAW-EB3]
gi|157318518|gb|ABV37616.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sediminis HAW-EB3]
Length = 181
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I++ + F D RG+F +T+ + L KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKIIEPQVFGDERGFFMETFRTSLFKEKCGDIEFVQENHSKSNH-GILRGLHYQTEQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR G +FD+AVD+R++SPTYG WV +SA N Q+++P GFAHGF + +
Sbjct: 67 T-QGKLVRVTKGEVFDVAVDLRKDSPTYGQWVGEILSAENKRQLWVPAGFAHGFYVMSED 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK TD+Y+ + + W D ++++ WP +D P +SEKD+N
Sbjct: 126 AEFMYKCTDYYNPSAEVSIKWDDPTLNVQWPWVDKQAPLLSEKDKNGLSFE 176
>gi|168481295|gb|ACA24785.1| RmlC [Shigella dysenteriae]
Length = 183
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 78/174 (44%), Positives = 114/174 (65%), Gaps = 3/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK T++Y+ ++ + W DK + I WP T+ +S+KD P L++
Sbjct: 126 ETAEFVYKTTNYYAPGYEGSIIWNDKILSIDWP-ELTLEYILSDKDLKAPILSE 178
>gi|187731823|ref|YP_001879841.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella boydii CDC 3083-94]
gi|187428815|gb|ACD08089.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella boydii CDC 3083-94]
Length = 185
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 115/173 (66%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S + G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAIGRKVEFVQDNHSKS-NKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +S+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSSENMRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T +Y E DSG+ W DK+I I WPL + P +SEKD NL
Sbjct: 126 DTAEFLYKTTKYYHPESDSGIIWNDKNIGICWPLREK--PIISEKDSNLLPFA 176
>gi|56476693|ref|YP_158282.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aromatoleum aromaticum EbN1]
gi|56312736|emb|CAI07381.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Aromatoleum aromaticum EbN1]
Length = 181
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 115/176 (65%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V +++ + F D+RG+F ++++++ ++ GL + FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPDVLLIEPKVFGDARGFFFESFNARAFRDATGLDETFVQDNHSRSAR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVD+RR SP++G W +E+S +N Q++IP GFAHGF+ L
Sbjct: 66 RQ-PQGKLVRVVRGAVFDVAVDLRRASPSFGRWAGVELSEDNHRQLWIPPGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ EH+ +AW D ++ I WPL + P +S KD+ L +
Sbjct: 125 ESADFLYKTTDYYAPEHERCLAWNDPAVGIEWPL--GVAPLLSGKDREGKLLAACE 178
>gi|189500844|ref|YP_001960314.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
BS1]
gi|189496285|gb|ACE04833.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
BS1]
Length = 195
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 113/192 (58%), Gaps = 3/192 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I + + F D RG+F +++ + + Q FVQDN S S G +RGLHFQ+P
Sbjct: 7 SIPDVLIFEPKVFGDERGYFFESFRQDVFELHVGQVNFVQDNQSKSKY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q+KLVR + G + D+AVDIR+ SP +G +V++++ + +++P GFAHGF+ L
Sbjct: 66 PFTQSKLVRVLDGCVIDVAVDIRKGSPWFGQYVAVKLDSAKNNMLWVPQGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ YK ++Y+ ++D+G+ W D + I W + + VS+KD P L++ F Y
Sbjct: 126 DAVFAYKCDNYYAPDYDAGIRWNDPELAIDWTIPVADI-QVSQKDATQPLLDEA-YLFSY 183
Query: 182 DGLPLLSLNMER 193
+ ++ +R
Sbjct: 184 ESFKKEAVYPQR 195
>gi|60682913|ref|YP_213057.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis NCTC 9343]
gi|253566043|ref|ZP_04843497.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
gi|265766787|ref|ZP_06094616.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
gi|60494347|emb|CAH09143.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis NCTC 9343]
gi|251945147|gb|EES85585.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
gi|263253164|gb|EEZ24640.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
gi|301164376|emb|CBW23934.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis 638R]
Length = 180
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V IL+ R F+D RG+F ++++ + +E + FVQDN S S G +RGLHFQ+ P
Sbjct: 8 IDGVVILEPRIFKDDRGYFFESFNQREFEEKVCKTTFVQDNESKSSY-GVLRGLHFQQAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR + G + D+AVDIR+ SPT+G V++E++ +N Q +IP G AHGF L
Sbjct: 67 FAQSKLVRVVKGAVLDVAVDIRKGSPTFGQHVAVELTEDNHRQFFIPRGLAHGFSVLSEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK +FY+ + + W D + I W + + +SEKD P L ++
Sbjct: 127 VVFQYKCDNFYAPHSEGAITWDDPDLGIDWRIPADRV-ILSEKDSRHPRLKDLN 179
>gi|154505986|ref|ZP_02042724.1| hypothetical protein RUMGNA_03528 [Ruminococcus gnavus ATCC 29149]
gi|153793485|gb|EDN75905.1| hypothetical protein RUMGNA_03528 [Ruminococcus gnavus ATCC 29149]
Length = 183
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++++ F D RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLKVITPAVFGDERGYFMETYNYNDYKEAGIDMEFVQDNQS-SSKKGVLRGLHFQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR ++G +FD+AVD+R+ S TYG W + +SA N Q +IP FAHGF+ L
Sbjct: 68 NYPQDKLVRVVSGEVFDVAVDLRKGSKTYGQWYGVVLSAENKKQFFIPKDFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ E YK TDFY + G+AW D I I WP+ + + ++SEKDQ + +++
Sbjct: 128 SAEFAYKCTDFYHPNDEGGLAWNDPDIGIEWPIPEDMELTISEKDQKWGGIKELNK 183
>gi|149277136|ref|ZP_01883278.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pedobacter sp. BAL39]
gi|149232013|gb|EDM37390.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pedobacter sp. BAL39]
Length = 184
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/178 (43%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + ++D+RG+F +++++K+L + G+ FVQDN SFS G +RGLH Q+ P
Sbjct: 8 IKGLLIVEPKVWKDNRGYFYESFNAKILSDAGIDVTFVQDNQSFSQK-GALRGLHAQKDP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR I GR+ D+AVDIR++SPT+G +LE+S N LQ+++P GF HGF+TLE +
Sbjct: 67 FAQGKLVRVIQGRVMDVAVDIRKSSPTFGQHFALELSGENHLQLWVPPGFLHGFITLEDD 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL-DTILPSVSEKDQNLPFLNQIDSPF 179
T YKV+++Y + GV W D ++I W +S+KDQ LP SPF
Sbjct: 127 TIFTYKVSNYYDKNSEIGVIWNDADLNIEWGKEVPESEFLLSDKDQVLPAFKDFSSPF 184
>gi|307153968|ref|YP_003889352.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7822]
gi|306984196|gb|ADN16077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7822]
Length = 180
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ + F D RG+F ++++ K ++ + FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVLIIEPKVFGDDRGFFYESFNQKAFQDKTEIITDFVQDNHSRSLK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVDIR +SPT+G WV +SA N Q +IP GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVVVGEVFDVAVDIRSSSPTFGQWVGCLLSAENKRQFWIPAGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ E++ + W D + I WPL P +S KD L + +
Sbjct: 125 EAAEFLYKTTDYYAPEYERSILWNDPDLAIDWPLQGE--PILSNKDLAGKLLKEAE 178
>gi|219670474|ref|YP_002460909.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfitobacterium hafniense
DCB-2]
gi|219540734|gb|ACL22473.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfitobacterium hafniense
DCB-2]
Length = 186
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 114/179 (63%), Gaps = 3/179 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V I++ + F D RGWF + +S + +KE GL+ FVQDNHSFS GT+RGLHFQ+ A
Sbjct: 10 DVYIIEPKVFGDHRGWFMEAWSIQKMKEAGLEYDFVQDNHSFSAQKGTLRGLHFQKGDAA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLVRC G + D+AVD+R+ SPTY WV++E+SA N Q+ IP G AH F+TL N E
Sbjct: 70 QTKLVRCSRGAVLDVAVDLRKGSPTYKKWVAVELSAENKRQLLIPRGMAHAFLTLTDNVE 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDG 183
+YK +FY E D + W D I++TW + + P VSEKD + P L D F Y+
Sbjct: 130 FLYKADNFYCPEADRSIIWNDPEINVTWGIEN---PIVSEKDASAPCLRNSDIDFVYEE 185
>gi|291615365|ref|YP_003525522.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sideroxydans lithotrophicus
ES-1]
gi|291585477|gb|ADE13135.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sideroxydans lithotrophicus
ES-1]
Length = 182
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 4/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F ++++ + EL G+ D FVQDNHS S +RGLH+Q
Sbjct: 8 IPDLFIVEPKVFGDDRGFFYESFNQRRFTELTGVTDPFVQDNHSKSAR-NVLRGLHYQIR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR IAG + DIAVDIRR+S T+G WV + +SA N +++P GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVIAGEVLDIAVDIRRSSATFGQWVGVNLSAENKKMLWVPKGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ E +YK TD+++ EH+ +AW D + I W L P +S KDQ L ++
Sbjct: 126 SAEFLYKTTDYWAPEHERCIAWNDPDLAIDWQLA-GATPLLSAKDQAGKLLRDAET 180
>gi|209693793|ref|YP_002261721.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aliivibrio salmonicida
LFI1238]
gi|209693856|ref|YP_002261784.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aliivibrio salmonicida
LFI1238]
gi|208007744|emb|CAQ77862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aliivibrio salmonicida
LFI1238]
gi|208007807|emb|CAQ77931.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aliivibrio salmonicida
LFI1238]
Length = 185
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 82/176 (46%), Positives = 112/176 (63%), Gaps = 6/176 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
NI V+I + F D RG+F +T+S K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 NIPDVKIFEPTVFGDERGFFMETWSQKKFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+ VDIR NSPT+G WV +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVVVDIRENSPTFGQWVGTYLSAENKHQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ E +YK TD+Y+ + + +AW DK+I I WP+ T P +SEKD+N L+Q+
Sbjct: 125 SEDAEFVYKCTDYYNPKSEISIAWDDKAIGIEWPI--TTPPQLSEKDKNAMILSQV 178
>gi|313894857|ref|ZP_07828417.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sp. oral taxon
137 str. F0430]
gi|312976538|gb|EFR41993.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sp. oral taxon
137 str. F0430]
Length = 184
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 84/181 (46%), Positives = 115/181 (63%), Gaps = 4/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ VRIL+ + F D+RGWF +++S K ++ G+ FVQDNHSFS + GT+RGLH+Q
Sbjct: 7 KLPGVRILEPQVFGDARGWFMESWSQKKMENAGIHVDFVQDNHSFSAERGTLRGLHYQLN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R G +FD+AVDIR SPTY W+ +E+SA N Q++IP GFAHGF+TL
Sbjct: 67 PMAQAKLLRVSRGAVFDVAVDIRCGSPTYAQWIGIELSAENYRQLFIPRGFAHGFITLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ-IDSPFE 180
N EV YK + Y+ + D + W D +I + WP +SEKD P L + + F
Sbjct: 127 NVEVQYKADNLYAPDCDGNIRWDDPAIGVAWPFTP---VVLSEKDAIAPSLAERTELNFV 183
Query: 181 Y 181
Y
Sbjct: 184 Y 184
>gi|311109417|ref|YP_003982270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Achromobacter xylosoxidans
A8]
gi|310764106|gb|ADP19555.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Achromobacter xylosoxidans
A8]
Length = 180
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +L+ R D RG+F ++++ + + GLQ FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVLLLEPRVLGDERGFFFESFNQAVFEAATGLQRNFVQDNHSRSAR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KL+R AG IFD+AVD+RR+SP++G WV +SA N Q++IP GFAHGF+TL
Sbjct: 65 -VEQPQGKLMRVCAGEIFDVAVDLRRDSPSFGQWVGTLLSAENKRQVWIPEGFAHGFLTL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD+Y+ +H+ + W D + I WP P +SEKD+N
Sbjct: 124 SDYAEVLYKTTDYYAPQHERCIRWDDPQLAIAWPC--QQPPLLSEKDRNGAPFADAP 178
>gi|104779535|ref|YP_606033.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Pseudomonas
entomophila L48]
gi|95108522|emb|CAK13216.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Pseudomonas
entomophila L48]
Length = 181
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D RG+F ++++++ ++ G + FVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVLIIEPKVFGDDRGFFFESFNAREFAEKAGFEAGFVQDNHSRSQR-GVLRGLHYQID 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G + D+AVDIRR+S T+G WV+ + A + Q +IP GFAHGF+ L
Sbjct: 67 N-PQGKLVRVVQGEVLDVAVDIRRSSKTFGKWVATRLCAKDHTQFWIPPGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD+Y+ + + + W D + I W L P +S KDQ FL++ +
Sbjct: 126 TADFLYKTTDYYNPKAERCIRWDDPELGIEWGL--EAPPILSAKDQAGAFLHEAE 178
>gi|154151293|ref|YP_001404911.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Methanoregula
boonei 6A8]
gi|153999845|gb|ABS56268.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanoregula boonei 6A8]
Length = 191
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 88/184 (47%), Positives = 120/184 (65%), Gaps = 4/184 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+N + I++ F+D RG+F +TY+ + E+G+ D FVQDN S S G +RGLH+Q
Sbjct: 10 KLNDITIIRPTVFKDDRGFFLETYNREEFAEVGITDEFVQDNVSHS-AKGVVRGLHYQ-S 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR + G+IFD+ VDIR SPTYG + +E+ A + +++P GFAHGFM L+
Sbjct: 68 KNAQGKLVRVLRGKIFDVVVDIRNGSPTYGHHLGIELDAQDAGMLFVPVGFAHGFMALKD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL--PSVSEKDQNLPFLNQIDSPF 179
TEV+YKVTDFYS ++D+G+ W D + I WP+ + P VS KD LPFL I SPF
Sbjct: 128 ATEVMYKVTDFYSPQYDAGIRWDDPDLRIPWPMKAQEISRPVVSPKDAVLPFLRDIISPF 187
Query: 180 EYDG 183
Y G
Sbjct: 188 NYAG 191
>gi|254416320|ref|ZP_05030074.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microcoleus chthonoplastes
PCC 7420]
gi|196177002|gb|EDX72012.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microcoleus chthonoplastes
PCC 7420]
Length = 181
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/176 (44%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ R F D RG+F ++Y+ K ++ + FVQDNHS S +RGLH+Q
Sbjct: 7 KIPDVVIIEPRVFGDERGFFLESYNQKAFTEKANIAANFVQDNHSRSVK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR I G + D+AVDIR++SPT+G WVS +SA N QI+IP GFAHGF+ +
Sbjct: 66 QQ-PQGKLVRAIVGTVLDVAVDIRQSSPTFGQWVSCLLSAENKRQIWIPPGFAHGFLVVS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EVIYK TD+Y+ +H+ + W D + I W L T P +S KDQ L +
Sbjct: 125 EVAEVIYKTTDYYAPQHERTLLWNDPDLGIDWDL--TTEPILSAKDQAGQPLKTAE 178
>gi|225386850|ref|ZP_03756614.1| hypothetical protein CLOSTASPAR_00598 [Clostridium asparagiforme
DSM 15981]
gi|225047047|gb|EEG57293.1| hypothetical protein CLOSTASPAR_00598 [Clostridium asparagiforme
DSM 15981]
Length = 185
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/172 (45%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ F+D RG+F +TY+ +E GL VFVQDN S S G +RGLHFQ
Sbjct: 12 IEGLYVIEPTVFKDERGYFVETYNQNDFREAGLNMVFVQDNQSMSVK-GVLRGLHFQ-KQ 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I G +FD+AVD+R +S TYG W + +SA N Q YIP GFAHGF+ L
Sbjct: 70 YPQGKLVRAIRGTVFDVAVDLRSDSGTYGKWFGVTLSAENKKQFYIPEGFAHGFLVLSDE 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TDFY + G+ W D I + WP+ + + +SEKDQ L
Sbjct: 130 AEFAYKCTDFYHPGDEGGLLWSDPEIGVEWPIEEGMELIISEKDQKWSGLKD 181
>gi|193213370|ref|YP_001999323.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobaculum parvum NCIB
8327]
gi|193086847|gb|ACF12123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobaculum parvum NCIB
8327]
Length = 185
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V + + + F D RGWF +++ + ++ FVQDN SFS G +RGLH+Q+P
Sbjct: 7 SLPGVLVFEPQVFGDDRGWFFESFRQDMFEQHAGSHRFVQDNESFSRH-GVVRGLHYQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY Q KLVR G + D+AVDIR+ SPT+G + +S NN +++P GFAHGF L
Sbjct: 66 PYTQGKLVRASRGEVLDVAVDIRKGSPTFGQHTAQLLSENNRRMMWLPPGFAHGFAVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK T +Y+ HD+G+ W D +I I W L + + S+S+KD P L++I+
Sbjct: 126 SAVFSYKCTGYYAPTHDAGIRWNDPAIGIDWRLSEQEI-SLSDKDLRQPLLHEIE 179
>gi|73809592|gb|AAZ85717.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli]
gi|323948402|gb|EGB44386.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli H120]
gi|324119067|gb|EGC12956.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli E1167]
Length = 176
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKIFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G ++D+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVYDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y E + G+ W DK+I+I WP++D +P +S+KD N L
Sbjct: 126 ETAEFVYKTTNYYHPESERGIIWDDKNINIHWPIVD--IPILSKKDHNNTSL 175
>gi|317048788|ref|YP_004116436.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pantoea sp. At-9b]
gi|316950405|gb|ADU69880.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pantoea sp. At-9b]
Length = 182
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ F D RG+F +T+ K +EL FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVKIIEPAVFGDERGFFMETWQQKKFEELVSPRTFVQDNHSKSSK-GILRGLHYQTV 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AG +FD+AVD+RR+SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 NT-QGKLVRVVAGEVFDVAVDMRRSSPTFGKWVGVLLSAENKRQLWVPEGFAHGFYVTSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ E +YK TD+Y+ +H+ + W D+ ++I WP+ PS+S KD ++
Sbjct: 125 SAEFVYKCTDYYNPQHEHSLLWNDRELNINWPINSDNPPSLSAKDAVGTPFSEA 178
>gi|146343780|ref|YP_001208828.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Bradyrhizobium sp. ORS278]
gi|146196586|emb|CAL80613.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Bradyrhizobium sp. ORS278]
Length = 184
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V IL+ + F D RG+F +T+ + +ELG+ FVQDN S S G +RGLH Q P
Sbjct: 7 DLPEVIILEPKLFGDHRGFFLETFQAARYRELGINGPFVQDNMSRSSY-GVLRGLHLQNP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + GR+ D+AVD+R SP +G V++E+S N Q+++P GFAHGF+ L
Sbjct: 66 NT-QGKLVSAMRGRVLDVAVDVRVGSPNFGKHVAVELSEENRRQLWVPRGFAHGFVVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YK D+YS + + V W D +I I W + + P +S KD P L + + Y
Sbjct: 125 SADFFYKCDDYYSPKDEMSVRWNDPAIGIDWGVPE---PKLSPKDAEAPLLAEARNLPVY 181
>gi|84622379|ref|YP_449751.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188578646|ref|YP_001915575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|84366319|dbj|BAE67477.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188523098|gb|ACD61043.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 185
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG+F +T++++ + GL F+Q N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFLQSNVSTSAK-GVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVD+R SP +G W ++ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ + P +S KD PFL + + +
Sbjct: 126 AVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISN---PLLSAKDAAAPFLADVPA----E 178
Query: 183 GLPLLSL 189
LP+
Sbjct: 179 RLPVYKP 185
>gi|332306499|ref|YP_004434350.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332173828|gb|AEE23082.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 182
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+N V I + + F D RG+F +T+ + L E VQDNHS S G +RGLH+Q
Sbjct: 8 LNDVLIFEPKVFGDERGFFMETFRADLFTETTGVQTLVQDNHSKSRQ-GILRGLHYQ-LE 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR G ++D+ VD+R++S T+G LE+S N Q+++P GFAHGF
Sbjct: 66 HTQGKLVRVTQGSVYDVVVDLRQSSSTFGQSFGLELSVQNNKQLWVPAGFAHGFYVTSET 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK +D+Y + + + W D ++I WPL++ +P++SEKD+
Sbjct: 126 AEFVYKCSDYYHPQSEVSILWNDPDLNIEWPLVNGDVPALSEKDKVGCLFKDAPK 180
>gi|307265775|ref|ZP_07547326.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919170|gb|EFN49393.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 185
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++T FED+RG+F ++Y+ + K G+ VFVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLYIIETGIFEDNRGYFMESYNCRDFKAAGIDAVFVQDNQSKSKK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R+NS TYG WV + +S N Q YIP GFAHGF+ L
Sbjct: 68 KHPQGKLVRVLKGEVFDVAVDLRKNSKTYGKWVGVILSDKNKRQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E YK TDFY + + G+ W D I+I WPL +SEKD+ P L ++
Sbjct: 128 EAEFFYKCTDFYYPDDEGGIIWNDPDINIQWPLEGIEEIILSEKDKKWPRLRDLE 182
>gi|303257171|ref|ZP_07343185.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderiales bacterium
1_1_47]
gi|331000814|ref|ZP_08324460.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parasutterella
excrementihominis YIT 11859]
gi|302860662|gb|EFL83739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderiales bacterium
1_1_47]
gi|329570342|gb|EGG52075.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parasutterella
excrementihominis YIT 11859]
Length = 185
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ + F D RG+F +T+ K +E G+ FVQDN SFS GT+RGLHFQ
Sbjct: 8 IQGLLEIQPKVFGDKRGFFLETWQKKRYEEAGIHYQFVQDNRSFSSR-GTLRGLHFQ-KR 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLV I G +FD+AVD+RR S TYG W L +SA Q++IP GFAHGF L
Sbjct: 66 FPQGKLVSVIFGEVFDVAVDLRRGSNTYGNWFGLVLSAEKCNQLWIPPGFAHGFYVLSET 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK TD+Y E ++G+ W DK I + WP+ +SEKD+N +I
Sbjct: 126 AFFEYKCTDYYHPEDEAGILWNDKDIGVDWPIPPASTVLLSEKDRNGLPFKEI 178
>gi|116687025|ref|YP_840272.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
HI2424]
gi|116652740|gb|ABK13379.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
HI2424]
Length = 193
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ F D+RG+F +++ + L++ G+ FVQDN S S G +RGLH+Q
Sbjct: 9 LPGVLLIEPGVFGDARGFFVESFRASWLRDAGVDATFVQDNQSRSRR-GVLRGLHYQ-RV 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV G ++D+AVDIRR SP++G W + + ++IP GFAHGF L
Sbjct: 67 NPQGKLVHASRGAVYDVAVDIRRGSPSFGRWFGALLDDVSHRMLWIPPGFAHGFCVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T +Y + D+GV W D +I I WP +S+KD+ P L ++
Sbjct: 127 ADFAYKCTQYYDPDSDAGVRWDDPAIGIDWP-DSGAPYQLSDKDRRQPPLAEL 178
>gi|153001414|ref|YP_001367095.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS185]
gi|151366032|gb|ABS09032.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS185]
Length = 185
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/177 (40%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +T+ ++ + G+ FVQDN S S G +RGLHFQ+
Sbjct: 7 KIKDLLIIEPKVFGDDRGFFYETFQNERYRAAGIDVEFVQDNRSRSTK-GVLRGLHFQKT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV G +FD+AVD+R S T+G ++ ++ N LQ Y+P GFAHGF L
Sbjct: 66 K-PQGKLVTVTDGEVFDVAVDLRPGSETFGQHETIILTGKNKLQFYVPPGFAHGFCVLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ YK TD+Y +SG+ W D S+ I WPL P +SEKD P L I
Sbjct: 125 TADFQYKCTDYYDPSDESGLLWNDPSLAIQWPLS---QPLLSEKDAVQPHLAAITHN 178
>gi|307302365|ref|ZP_07582123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica BA175]
gi|306914403|gb|EFN44824.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica BA175]
Length = 184
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 100/177 (56%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +T+ + K G+ D FVQDN S S G +RGLHFQ
Sbjct: 7 KIKDLLIIEPKVFGDDRGFFYETFQKERYKAAGIIDDFVQDNRSRS-TKGVLRGLHFQ-K 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV G +FD+AVD+R NS T+G + ++ ++ N LQ Y+P GF HGF L
Sbjct: 65 TKPQGKLVTVTEGEVFDVAVDLRPNSETFGQYEAIILTGANKLQFYVPPGFGHGFCVLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ YK TD+Y +SG+ W D ++I WP+ P +SEKD LP L I
Sbjct: 125 IADFQYKCTDYYDPADESGLLWSDAELNIQWPID---APLLSEKDAQLPTLMDIKDK 178
>gi|115358135|ref|YP_775273.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria AMMD]
gi|115283423|gb|ABI88939.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria AMMD]
Length = 193
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ F D+RG+F +++ L++ G+ FVQDN S S G +RGLH+Q
Sbjct: 9 LPGVLVIEPGVFGDARGFFVESFRESWLRDAGVDATFVQDNQSRSRR-GVLRGLHYQ-RV 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV G ++D+AVDIRR SP++G W ++ + ++IP GFAHGF L
Sbjct: 67 NPQGKLVHAARGTVYDVAVDIRRGSPSFGRWFGAQLDDISHRMLWIPPGFAHGFCVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T +Y + D+GV W D +I I WP +S+KD+ P L ++
Sbjct: 127 ADFAYKCTQYYDPDSDAGVRWDDPAIGIDWPAS-GAPYQLSDKDRRQPPLAEL 178
>gi|10803348|emb|CAC13136.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter xylinus]
Length = 185
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N+ + +L +F D RG+FS+T+++ +KE+G+ FVQDNHS S G +RGLH Q
Sbjct: 7 NVAGIILLTPPRFGDERGYFSETFNAARMKEIGIPGPFVQDNHSLSRARGVVRGLHCQLS 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q KLVRC G I+D+ VDIR SPT+G WV +S NG Q++IPTGF HGF TL
Sbjct: 67 PHPQGKLVRCTRGSIWDVGVDIRAGSPTFGQWVGATLSEENGSQLWIPTGFLHGFCTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
N EV YK TD++ + + V W D + I WP+ +S KD + + +D F
Sbjct: 127 NAEVQYKCTDYWDRDCERSVRWDDPLLAIDWPVTPKDA-ILSAKDADALPFSSVDDWF 183
>gi|170702909|ref|ZP_02893751.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria
IOP40-10]
gi|170132189|gb|EDT00675.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria
IOP40-10]
Length = 193
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ F D+RG+F +++ L++ G+ FVQDN S S G +RGLH+Q
Sbjct: 9 LPGVLVIEPGVFGDARGFFVESFRESWLRDAGVDATFVQDNQSRSRR-GVLRGLHYQ-RV 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV G ++D+AVDIRR SP++G W ++ + +++P GFAHGF L
Sbjct: 67 NPQGKLVHAARGTVYDVAVDIRRGSPSFGRWFGAQLDDISHRMLWVPPGFAHGFCVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T +Y + D+GV W D +I I WP +S+KD+ P L ++
Sbjct: 127 ADFAYKCTQYYDPDSDAGVRWDDPAIGIDWPAS-GAPYQLSDKDRRQPPLAEL 178
>gi|228946127|ref|ZP_04108462.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228813540|gb|EEM59826.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 194
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 112/179 (62%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I++ K D RG+F +T + K + L LQ FVQDN S S GTIRGLH+Q P
Sbjct: 14 LDGVFIIELDKCSDKRGYFIETCNKKKFELLDLQGDFVQDNQSLSVHTGTIRGLHYQLNP 73
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ K+V CI+G I+D+ VDIR+ SPTYG W +S N + +P GFAHGF T E N
Sbjct: 74 KAQMKVVSCISGSIYDVVVDIRKGSPTYGQWFGTILSEYNNRLLTVPKGFAHGFCTTEPN 133
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T V YKV ++YS +H+ G+ W D++I I WP T P +SEKD+ LP L + F Y
Sbjct: 134 TIVQYKVDEYYSPKHEGGILWNDETIGIFWP---TNQPILSEKDRKLPRLKDTNVNFVY 189
>gi|302337208|ref|YP_003802414.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta smaragdinae DSM
11293]
gi|301634393|gb|ADK79820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta smaragdinae DSM
11293]
Length = 180
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I+K R F D RG+F +TY + G+ FVQDNHS+S G +RG+HFQ+
Sbjct: 9 KISGVMIVKPRIFPDERGFFMETYKKSDFESAGICADFVQDNHSYSAF-GVLRGIHFQKA 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLV + G ++D+AVD+R +SPT+ WV + +++ G +Y+P G HGF+ L
Sbjct: 68 SHAQGKLVHAVEGSVWDVAVDLRPSSPTFKQWVGITLNSEEGTMLYLPPGCGHGFVVLSH 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+YK T Y+ + D G+ W D + + WP+ P VSEKD LPF +++
Sbjct: 128 TVHFLYKCTTEYAPQADGGIRWNDPDLAVAWPVDH---PQVSEKDAALPFFSEV 178
>gi|255011088|ref|ZP_05283214.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis 3_1_12]
gi|313148896|ref|ZP_07811089.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis 3_1_12]
gi|313137663|gb|EFR55023.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis 3_1_12]
Length = 180
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V IL+ R F+D RG+F ++++ + +E + FVQDN S S G +RGLHFQ+ P
Sbjct: 8 IDGVVILEPRIFKDDRGYFFESFNQREFEEKVCKTTFVQDNESKSSY-GVLRGLHFQQAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR + G + D+AVDIR+ SPT+G V++E++ +N Q +IP G AHGF L
Sbjct: 67 FAQSKLVRVVKGAVLDVAVDIRKGSPTFGQHVAVELTEDNHRQFFIPRGLAHGFSVLSEA 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK +FY+ + VAW D + I W + + +SEKD P L ++
Sbjct: 127 VVFQYKCDNFYAPHSEGAVAWDDPDLGIDWRIPADRV-ILSEKDSRHPRLKDLN 179
>gi|9957867|gb|AAG09540.1|AF279625_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 179
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/172 (46%), Positives = 114/172 (66%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFSDERGFFMESFNQKVFEEAVGRKIEFVQDNHSKS-TKGVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC AG +FD+AVDIR++S T+G WV + IS+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCTAGEVFDVAVDIRKDSETFGKWVGVNISSENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + +YK +++YS H+ G+ W D +I+I WP+ I +SEKD LP
Sbjct: 126 DSADFLYKTSNYYSPVHERGIVWNDPTININWPI--NIDKILSEKDTILPKF 175
>gi|153813189|ref|ZP_01965857.1| hypothetical protein RUMOBE_03605 [Ruminococcus obeum ATCC 29174]
gi|149830720|gb|EDM85811.1| hypothetical protein RUMOBE_03605 [Ruminococcus obeum ATCC 29174]
Length = 189
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 102/176 (57%), Gaps = 2/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ++++ F D RG+F +TY+ K G+ FVQDN S S G +RGLHFQ
Sbjct: 11 IEGLKVITPAVFGDERGYFMETYNYNDYKAAGIDMEFVQDNQS-SSRKGVLRGLHFQI-N 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR ++G +FD+AVD+R SPTYG W + +SA N Q +IP FAHGF+ L +
Sbjct: 69 YPQDKLVRVVSGEVFDVAVDLREGSPTYGQWYGVLLSAENKKQFFIPKNFAHGFVVLSDS 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E YK TDFY + G+A+ D I + WP+ + + +S+KDQ + +
Sbjct: 129 AEFAYKCTDFYHPNDEGGLAYNDPDIGVEWPIPEGMELILSDKDQKWGSFKEYTAN 184
>gi|109898447|ref|YP_661702.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoalteromonas atlantica
T6c]
gi|109700728|gb|ABG40648.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoalteromonas atlantica
T6c]
Length = 182
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+N V I + + F D RG+F +T+ + L E VQDNHS S G +RGLH+Q
Sbjct: 8 LNDVLIFEPKVFGDERGFFMETFRADLFTEATGVKALVQDNHSKSRQ-GILRGLHYQ-LE 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR G ++D+ VD+R++S ++G +E+SA N Q+++P GFAHGF
Sbjct: 66 HTQGKLVRVTQGSVYDVVVDLRQSSSSFGQSYGIELSAQNNKQLWVPAGFAHGFYVTSET 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK +D+Y + + + W D ++ I WPL++ P++SEKD+ +
Sbjct: 126 AEFVYKCSDYYHPQSEVSILWNDPALSIQWPLVNGETPALSEKDKVGCLFSDAPK 180
>gi|296447932|ref|ZP_06889841.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylosinus trichosporium
OB3b]
gi|296254569|gb|EFH01687.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylosinus trichosporium
OB3b]
Length = 184
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 87/178 (48%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+I+ +KF D RG+FS+T++ GL FVQDNHS S + G IRGLHFQ P
Sbjct: 8 LAGVKIVTPKKFGDERGFFSETHNQNKWDAHGLHYRFVQDNHSLSREVGVIRGLHFQTAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR + GRI D+AVDIRR+SPT+G V++E+SA N Q+ +P GFAH F TLE +
Sbjct: 68 FAQDKLVRVVRGRILDVAVDIRRSSPTFGRHVAVELSAENWRQLLVPIGFAHAFCTLEPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
TEV YKVT+FYS +D G+A+ D + I WP+ +S+KD+ P L + F+
Sbjct: 128 TEVFYKVTNFYSGANDRGLAFDDPDLGIDWPVA-LERAVLSDKDRRWPRLRDLADAFD 184
>gi|260162548|dbj|BAI43790.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Klebsiella pneumoniae]
Length = 184
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 111/176 (63%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + R F D+RG+F +++SSK+ E G Q FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPRVFGDARGFFFESFSSKVFNEAVGRQVDFVQDNHSQSQK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+ G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGFM L
Sbjct: 66 DPHAQGKLVRCVEGEVFDVAVDIRRSSPTFGKWVGAVLSAENKRQLWIPEGFAHGFMALS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y+ + + + W D I I WP L S+SEKD L +
Sbjct: 126 DTVQFVYKATNYYAPQSERSIIWNDPEIGIDWPALGDCALSLSEKDLQAHTLATAE 181
>gi|126741092|ref|ZP_01756774.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseobacter sp. SK209-2-6]
gi|126717856|gb|EBA14576.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseobacter sp. SK209-2-6]
Length = 197
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 95/180 (52%), Positives = 127/180 (70%), Gaps = 4/180 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++IL+ +F D+RG+FS++++ + ++E G+ FVQDNHS S + GT+RGLHFQ PP
Sbjct: 19 LPGLKILEPARFGDARGFFSESWNQRRMQEHGIDLDFVQDNHSLSSEVGTLRGLHFQSPP 78
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVRC GR+FD+AVDIR+ SPTYG W E+S +NGLQ+ IP GF HGF+T E +
Sbjct: 79 HAQAKLVRCGRGRLFDVAVDIRKGSPTYGKWFGTELSFDNGLQLLIPAGFLHGFITREPD 138
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TE+IYK TD+Y+ E D VAW S DI W T P +S+KD P L DSPF Y+
Sbjct: 139 TEIIYKCTDYYAPECDGAVAWD--SCDIDWGFEGT--PMLSDKDAAAPKLADFDSPFTYE 194
>gi|170734748|ref|YP_001773862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
MC0-3]
gi|169820786|gb|ACA95367.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
MC0-3]
Length = 193
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ F D+RG+F +++ + L++ G+ FVQDN S S G +RGLH+Q
Sbjct: 9 LPGVLLIEPGVFGDARGFFVESFRASWLRDAGVDATFVQDNQSRSRR-GVLRGLHYQ-RV 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV G ++D+AVDIR SP +GCW ++ + ++IP GFAHGF L
Sbjct: 67 NPQGKLVHAARGAVYDVAVDIRYGSPFFGCWFGAQLDDVSHRMLWIPPGFAHGFCVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T +Y + D+GV W D +I I WP +S+KD+ P L ++
Sbjct: 127 ADFAYKCTQYYDPDSDAGVRWDDPAIGIDWP-DSGAPYQLSDKDRRQPPLAEL 178
>gi|218247213|ref|YP_002372584.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8801]
gi|218167691|gb|ACK66428.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8801]
Length = 181
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ F D RG+F +++++K +E G+ FVQDNHS S +RGLH+Q
Sbjct: 7 KIPDVMIIEPNVFGDDRGFFYESFNAKKFAEETGVNPNFVQDNHSKSGK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G + DIAVDIR++SP++G WV ++ N Q ++P GFAHGF+ L
Sbjct: 66 QQT-QGKLVRVVVGEVLDIAVDIRKSSPSFGQWVGCILNTENKRQFWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ +++ + W D I+I W + D P +S+KDQ L +
Sbjct: 125 DVAEFLYKTTDYYAPQYERSILWNDPDINIDWQITD--QPILSKKDQLASRLKDAE 178
>gi|325920446|ref|ZP_08182374.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas gardneri ATCC
19865]
gi|325549093|gb|EGD20019.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas gardneri ATCC
19865]
Length = 185
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/187 (39%), Positives = 106/187 (56%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG+F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTNFVQSNVSTS-ARGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIR SP +G W ++ +SA N Q++IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDIRSGSPHFGHWTAVLLSAENRRQVWIPEGFAHGFAVLSEK 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D I I WP+ D P +S KD + PFL+++ D
Sbjct: 126 ALFSYLCTDVYVREADAGVRWNDAEIGIDWPISD---PLLSAKDASAPFLSEVPV----D 178
Query: 183 GLPLLSL 189
LP+ +
Sbjct: 179 RLPVYTP 185
>gi|74317796|ref|YP_315536.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thiobacillus denitrificans
ATCC 25259]
gi|74057291|gb|AAZ97731.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thiobacillus denitrificans
ATCC 25259]
Length = 180
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 79/175 (45%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +L+ + F D+RG+F ++++ K LGL FVQDNHS S G +RGLH+Q
Sbjct: 7 SLPEVLLLEPKVFGDARGFFLESWNRKTFSALGLDVDFVQDNHSRSAR-GVLRGLHYQIK 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+RR SP +G WV E+SA N ++IP GFAHGF+ L
Sbjct: 66 D-PQGKLVRVVNGSVFDVAVDLRRASPNFGRWVGYELSAENQRMLWIPPGFAHGFLVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK T +Y+ E D GV W D I I WP + P++S KDQ LPFL +
Sbjct: 125 SADFLYKTTAYYAPEWDRGVCWNDPEIGIEWPWSGS--PTLSAKDQVLPFLKDAE 177
>gi|315299445|gb|EFU58696.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 16-3]
Length = 182
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S +RG+H+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKSKI-NVLRGMHYQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR I+G ++D+AVD+R S T+G WV +E+S NN Q++IP GFAHGF LE
Sbjct: 66 QNT-QGKLVRVISGSVYDVAVDLREKSKTFGKWVGVELSGNNKRQLWIPEGFAHGFYVLE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
NTE +YK TD Y+ H+ + W D +I+I+WP++ P +SEKD N +
Sbjct: 125 ENTEFVYKCTDTYNPAHEHTLLWNDPTINISWPIIQNCKPIISEKDANGHLFS 177
>gi|121607688|ref|YP_995495.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Verminephrobacter eiseniae
EF01-2]
gi|121552328|gb|ABM56477.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Verminephrobacter eiseniae
EF01-2]
Length = 182
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/177 (37%), Positives = 109/177 (61%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + D+RG+F ++++ + ++ G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPEVVLIEPQVHGDARGFFYESFNQRAFEQATGCAGRFVQDNHSRSAQ-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G + D+ VD+R++SP++G WV+ E+SA+N Q+++P GFAHGF+ L
Sbjct: 65 IRQ-PQGKLVRVVRGAVLDVVVDLRKSSPSFGQWVAEELSADNHRQLWVPPGFAHGFLVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ H+ +AW D ++ I W L P +S +D P L +
Sbjct: 124 SDSAECLYKTTDYYAPAHERCIAWDDPALAIDWRLRGNR-PLLSPRDAQAPPLAHAE 179
>gi|160425306|gb|ABX39498.1| RmlC [Aeromonas hydrophila]
Length = 183
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ + I++ + F D RG+F +TY K G+ FVQDN S F +RGLHFQ+
Sbjct: 7 KISDLLIIEPKVFGDERGFFYETYQDARYKAAGITLDFVQDNRSR-FTQNVLRGLHFQKT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV GR+FD+AVD+R +SPT+G S+ ++ N +Q YIP GFAHGF L
Sbjct: 66 K-PQGKLVTVTQGRVFDVAVDLRPDSPTFGQHESVLLTGENKVQFYIPPGFAHGFCVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y +SG+ W D + I WPL P +S KD P L QI
Sbjct: 125 TADFQYKCTDYYDPADESGLLWNDPELGIEWPL---AAPVLSPKDSVQPTLAQI 175
>gi|218438466|ref|YP_002376795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7424]
gi|218171194|gb|ACK69927.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7424]
Length = 180
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ + F D RG+F ++++ K+ K+ + FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVLIIEPKVFGDDRGFFYESFTEKVFKDKTEVDTHFVQDNHSRSLK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVDIR NSPT+G WV +SA N Q+++P GFAHGF+ L
Sbjct: 66 KQ-PQGKLVRVVLGEVFDVAVDIRSNSPTFGQWVGCRLSAENKRQLWVPEGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ E++ + W D I I WP+ D P +S KDQ + D
Sbjct: 125 EAAEFLYKTTDYYAPEYERTIIWNDPDIGIDWPIEDE--PILSNKDQAGKLFKEAD 178
>gi|194334530|ref|YP_002016390.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prosthecochloris aestuarii
DSM 271]
gi|194312348|gb|ACF46743.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prosthecochloris aestuarii
DSM 271]
Length = 181
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V + + R F D RG+F +++ ++ FVQDN S S G +RGLHFQ+
Sbjct: 8 IPDVLVFEPRIFGDERGYFFESFRQDFFEKHAGDVHFVQDNESRSHY-GVLRGLHFQKAQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q KLVR + G + D+AVDIR+ SP +G V++ ++A ++IP GFAHGF+ L
Sbjct: 67 YSQGKLVRVVEGAVLDVAVDIRKGSPWFGKHVAMHLNAEKKNMMWIPRGFAHGFVVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK ++Y+ E D+G+ W D ++ I W + D + VSEKD NL L +I
Sbjct: 127 AVFTYKCDNYYAPEADAGIRWNDPALGIEWGV-DASVIEVSEKDANLALLAEI 178
>gi|222109772|ref|YP_002552036.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Acidovorax ebreus TPSY]
gi|221729216|gb|ACM32036.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax ebreus TPSY]
Length = 181
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 114/177 (64%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F ++++ K E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPEVVLIEPQVFGDARGFFFESFNQKTFNEATGTNHQFVQDNHSRSSQ-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G+++D+AVDIR++SPT+G WV E+S +N Q+++P GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVARGKVWDVAVDIRKSSPTFGQWVGAELSEDNQHQLWVPPGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ EH+ +AW D+++ I+WP+ I P +S KDQ L +
Sbjct: 124 SESADFLYKTTDYYAPEHERCIAWNDEALTISWPVS--ITPILSAKDQLGAALCDAE 178
>gi|228912334|ref|ZP_04076029.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
200]
gi|228847317|gb|EEM92276.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
200]
Length = 194
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I++ K D RG+F +T + K + L LQ FVQDN S S GTIRGLH+Q P
Sbjct: 14 LDGVFIIELDKCSDKRGYFIETCNKKKFELLDLQGDFVQDNQSLSVHTGTIRGLHYQLNP 73
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ K+V CI+G I+D+ VDIR+ SPTYG W +S N + +P GFAHGF T E N
Sbjct: 74 KAQMKVVSCISGSIYDVVVDIRKGSPTYGQWFGTILSEYNNRLLTVPKGFAHGFCTTEPN 133
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T V YKV ++YS H+ G+ W D++I I WP T P +SEKD+ LP L + F Y
Sbjct: 134 TIVQYKVDEYYSPNHEGGILWNDETIGIFWP---TNQPILSEKDKKLPRLKDTNVNFVY 189
>gi|114326768|ref|YP_743925.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Granulibacter bethesdensis
CGDNIH1]
gi|114314942|gb|ABI61002.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Granulibacter bethesdensis
CGDNIH1]
Length = 188
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 85/181 (46%), Positives = 111/181 (61%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V ++ +F D+RG+FS+TY + E G+ FVQDNHS S GTIRGLH Q
Sbjct: 6 LAIPEVILVTPDRFGDNRGFFSETYQHRKYAEGGISGTFVQDNHSLSAQRGTIRGLHCQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLVRC+ G I+D+AVD R SPTYG WV+ E+SA N Q+++P GF H F TL+
Sbjct: 66 APNVQGKLVRCVRGAIWDVAVDARTGSPTYGQWVAAELSAENWQQLWVPGGFLHAFCTLQ 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TEVIYKVT Y + GV W D +D+ WP+ + + SEKD LP + F
Sbjct: 126 PDTEVIYKVTGDYDKSAERGVIWNDAELDLPWPVAPEEVVT-SEKDLQLPPFSAAKGWFT 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|150020961|ref|YP_001306315.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosipho melanesiensis
BI429]
gi|149793482|gb|ABR30930.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosipho melanesiensis
BI429]
Length = 190
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I+K + DSRG+F ++++ K E+GL FVQDNHS S G +RGLHFQ
Sbjct: 11 IEGLYIIKPTVYGDSRGFFMESWNRKEFAEIGLDMDFVQDNHSKS-KKGVLRGLHFQ-EK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G ++D+AVD+R++SPT+G + + +S N L YIP GFAHGF+ L
Sbjct: 69 YPQGKLVRVVKGVVYDVAVDLRKDSPTFGKYYGVILSEENKLMFYIPEGFAHGFLVLSDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL--PSVSEKDQNLPFLNQ 174
+YK T++Y E+DSG+ W D I I WP + + P +SEKD+ LP L +
Sbjct: 129 VHFLYKATEYYYPEYDSGIIWNDPDIAIKWPFEEYRIEYPILSEKDKKLPTLRE 182
>gi|21244308|ref|NP_643890.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas axonopodis pv.
citri str. 306]
gi|21109959|gb|AAM38426.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 185
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG+F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTKFVQSNVSTS-AKGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVD+R SP +G W ++ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ + P +S KD PFL + + +
Sbjct: 126 AVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISN---PLLSAKDSAAPFLGDVPA----E 178
Query: 183 GLPLLSL 189
LP+ +
Sbjct: 179 RLPVYTP 185
>gi|171057313|ref|YP_001789662.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptothrix cholodnii SP-6]
gi|170774758|gb|ACB32897.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptothrix cholodnii SP-6]
Length = 183
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + F D+RG+F ++++ +G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIADVLIIEPKVFGDARGFFMESWNQSRFDAAVGSPVRFVQDNHSRS-ARGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR G +FD+AVD+RR+SPT G W+ E+SA+N +++IP GFAHGFM L
Sbjct: 66 PPHAQGKLVRVTRGVVFDVAVDLRRSSPTLGRWICTELSADNHRELWIPPGFAHGFMVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + +YK TD+++ + ++ V W D + I WP LDT P +S KDQ P +
Sbjct: 126 DSADFLYKTTDYHAPDCEAAVRWDDPELAIAWPALDT-PPLLSAKDQQAPGWREA 179
>gi|254250563|ref|ZP_04943882.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Burkholderia
cenocepacia PC184]
gi|124879697|gb|EAY67053.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Burkholderia
cenocepacia PC184]
Length = 192
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ F D+RG+F +++ + L++ G+ FVQDN S S G +RGLH+Q
Sbjct: 9 LPGVLLIEPGVFGDARGFFVESFRASWLRDAGVDATFVQDNQSRSRR-GVLRGLHYQ-RV 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV G ++D+AVDIR SP +GCW ++ + ++IP GFAHGF L
Sbjct: 67 NPQGKLVHAARGAVYDVAVDIRHGSPFFGCWFGAQLDDVSHRMLWIPPGFAHGFCVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T +Y + D+GV W D I I WP +S+KD+ P L ++
Sbjct: 127 ADFAYKCTQYYDPDSDAGVRWDDPEIGIEWP-DPGAPYQLSDKDRRQPPLAEL 178
>gi|327399838|ref|YP_004340707.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hippea maritima DSM 10411]
gi|327182467|gb|AEA34648.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hippea maritima DSM 10411]
Length = 191
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 113/186 (60%), Gaps = 5/186 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D+RG+F +T+ + ++ + F+QDN S S G +RGLH+Q P
Sbjct: 7 KIPDVVIIELKVFGDNRGYFMETFRQDIFEKNVRKINFIQDNESKSKR-GVLRGLHYQLP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR I G + D+AVDIR+ S T+G +V++E+S +N Q++IP GFAHGF+
Sbjct: 66 PFAQSKLVRVIKGSVIDVAVDIRKGSSTFGKYVAVELSEDNKKQLFIPRGFAHGFLVTSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YKV ++Y+ E+D + + D I+I W + VSEKD+N P L + +
Sbjct: 126 EAIFTYKVDNYYAPEYDRNIRFDDPDININWNFPKDKI-LVSEKDKNAPLLKDAE---IF 181
Query: 182 DGLPLL 187
+ + L
Sbjct: 182 EYVDLY 187
>gi|302388126|ref|YP_003823948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium saccharolyticum
WM1]
gi|302198754|gb|ADL06325.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium saccharolyticum
WM1]
Length = 184
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 5/179 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ F DSRG+F +TY+ +E GL VFVQDN S S G +RGLHFQ
Sbjct: 11 IKGLFVIEPAVFHDSRGYFMETYNQNDFQEAGLDMVFVQDNQSMSAK-GVLRGLHFQ-KQ 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G++FD+AVD+R +S TYG W +E+SA N Q YIP GFAHGF+ L
Sbjct: 69 FPQGKLVRVVRGKVFDVAVDLRSSSETYGKWFGVELSAENKKQFYIPEGFAHGFLVLSDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TDFY + G+ W D SI I WP+ + + +S+KDQ + + F++
Sbjct: 129 AEFAYKCTDFYHPGDEGGILWSDPSIGIDWPIEEGMELIISDKDQKWGGIRE---TFKF 184
>gi|189500820|ref|YP_001960290.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
BS1]
gi|189496261|gb|ACE04809.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
BS1]
Length = 201
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 3/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V + + R F DSRG+F +++ +L+E + FVQDN S S G +RGLHFQ+PP
Sbjct: 10 IPDVLVFEPRVFGDSRGYFFESFRKDILQEHVGKVDFVQDNQSKSGY-GVLRGLHFQKPP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR IAG + D+AVDIR SP YG V++++ + ++IP GFAHGF+ L
Sbjct: 69 FTQSKLVRVIAGAVLDVAVDIREGSPWYGRHVAVKLDSERNNMLWIPQGFAHGFIVLSKE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK ++Y+ ++D+G+ W DK++ I W L + + VS+KD +LPFL + F YD
Sbjct: 129 AIFSYKCDNYYAPDYDAGIRWNDKALGIDWTLPEEDI-QVSDKDASLPFLKEA-YHFSYD 186
Query: 183 G 183
Sbjct: 187 D 187
>gi|330962124|gb|EGH62384.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 181
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 79/175 (45%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ R F D RG+F +++++K +E GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPRVFGDERGFFYESFNAKAFQEATGLTRQFVQDNHSRSQQ-GVLRGLHYQIE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 67 N-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W L PS+S KDQ L + D
Sbjct: 126 HAEFLYKTTDYYTPSAERCIAWDDPDLAIDWQLDG--QPSLSAKDQQGKRLKEAD 178
>gi|317055130|ref|YP_004103597.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus albus 7]
gi|315447399|gb|ADU20963.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus albus 7]
Length = 183
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+ + + D RG+F +TY K GL FVQDN S S G +RGLHFQ
Sbjct: 10 KIKGVYIIDVKTYGDERGYFMETYKEDDFKAAGLDYKFVQDNQS-SSRKGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ QAKLVR + G +FD+AVD+R+ S TYG WV +S N Q IP GFAHGF+ +
Sbjct: 68 THPQAKLVRVLKGEVFDVAVDLRKGSETYGQWVGAVLSEENKRQFMIPRGFAHGFLVMSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK D Y E + G+ W D +I I W D +SEKD++ P L + F
Sbjct: 128 YAEFAYKCDDLYHPEDEGGIMWNDPAIGIEW--KDVGELILSEKDKHHPSLAESKIEF 183
>gi|332827873|gb|EGK00595.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dysgonomonas gadei ATCC
BAA-286]
Length = 182
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 65/173 (37%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V I++ R F D RG+F ++Y +E + F+QDN S S G +RGLH+Q
Sbjct: 7 NIKGVWIIEPRVFTDERGYFMESYRKDAFEEHIGRVEFIQDNESKS-TRGVLRGLHYQTG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLVR + G + D+ VD+R++SPT+G +++E++ +N Q+++P GFAHGF+ L
Sbjct: 66 KYAQAKLVRVLKGSVLDVVVDLRKSSPTFGKSLAVELTEDNKKQLFVPRGFAHGFLVLSP 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YKV + Y+ +++ + W D +I+I W + + L +S KD+ +
Sbjct: 126 EAIFSYKVDNMYAPGYEASLLWNDPTININWGIKEEEL-ILSAKDKAGKLFTE 177
>gi|297181613|gb|ADI17797.1| dtdP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[uncultured Sphingobacteriales bacterium HF0130_33B19]
Length = 182
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 111/179 (62%), Gaps = 4/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I + I+K + F D RG F ++++ K +++GL F QDN S S G +RGLHFQ
Sbjct: 6 LSIEGLLIIKPKVFGDERGHFFESWNKKAYQDIGLDLDFTQDNQSIS-QKGVLRGLHFQN 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PPYAQ KLVR I G + D+AVD+R+ S TYG +S++++ N +IP GFAHGF+ LE
Sbjct: 65 PPYAQGKLVRVIKGAVIDVAVDLRKGSLTYGQHISVKLTEQNMKTFWIPPGFAHGFVALE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T YK T+ Y+ + + + W D ++I+W + + P VSEKD++ SPF
Sbjct: 125 NDTIFSYKCTEVYNQDAEGSLLWNDPDLNISWGVQN---PLVSEKDKHSCLFKNFKSPF 180
>gi|258517208|ref|YP_003193430.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfotomaculum acetoxidans
DSM 771]
gi|257780913|gb|ACV64807.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfotomaculum acetoxidans
DSM 771]
Length = 182
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 79/172 (45%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ F D RG+F +TY K E GL FVQDN S S G +RGLHFQ
Sbjct: 11 IQGLYIIEPMIFGDHRGYFMETYHLKEFSEAGLNMAFVQDNQSKSKK-GVLRGLHFQ-RK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I G +FD+AVD+R +S TYG W + +S N Q YIP FAHGF+ L
Sbjct: 69 YPQGKLVRVIKGEVFDVAVDLRMDSKTYGKWFGVILSEENKKQFYIPESFAHGFLVLSDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK TD+Y E + G+ W D +I I WPL +SEKDQ L
Sbjct: 129 AEFVYKCTDYYHPEDEDGILWNDPAIGIAWPLDRIDDIILSEKDQKWKGLKD 180
>gi|325662387|ref|ZP_08150996.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471389|gb|EGC74612.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae bacterium
4_1_37FAA]
Length = 185
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++++ F D RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLKVITPTVFGDERGYFMETYNYNDYKEAGIDMEFVQDNQS-SSKKGVLRGLHFQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR ++G +FD+AVD+R S TYG W + +SA N Q +IP FAHGF+ L
Sbjct: 68 NFPQDKLVRVVSGEVFDVAVDLREGSKTYGQWYGVLLSAENKKQFFIPKDFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E YK TDFY + G+AW D I I WP+ + + ++SEKDQ + +
Sbjct: 128 TAEFAYKCTDFYHPNDEGGLAWNDPDIGIQWPIPEGMELTISEKDQKWTGIKTLKK 183
>gi|292669522|ref|ZP_06602948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas noxia ATCC 43541]
gi|292648731|gb|EFF66703.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas noxia ATCC 43541]
Length = 186
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V IL+ + F D+RGWF +++S K ++ G+ FVQDNHSFS GT+RGLH+Q P
Sbjct: 8 LEGVFILEPQVFGDARGWFMESWSQKKMENAGINVNFVQDNHSFSAQRGTLRGLHYQLNP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQAKL+R G IFD+AVDIRR SPTY WV +E+SA N Q++IP GFAHGF+TL N
Sbjct: 68 MAQAKLLRVSRGAIFDVAVDIRRGSPTYAKWVGIELSAENYRQLFIPRGFAHGFITLTDN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ-IDSPFEY 181
EV YK +FY+ D + W D I I WP+ +S+KD P L++ + F Y
Sbjct: 128 VEVQYKADNFYAPGCDGNIRWNDPVISIVWPMNPR---VLSDKDAAAPTLSERNELNFTY 184
>gi|262374524|ref|ZP_06067798.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acinetobacter junii SH205]
gi|262310520|gb|EEY91610.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acinetobacter junii SH205]
Length = 191
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 111/181 (61%), Gaps = 6/181 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-----DVFVQDNHSFSFDCGTIRGL 56
I + IL+ + F D RGWF ++++ K + L+ FVQDNHSFS G +RGL
Sbjct: 7 KIKGLLILEPKVFGDDRGWFMESFNQKSFESALLERGMDIPQFVQDNHSFSQK-GVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q P AQ KLVR + GR +D+AVDIR+NSPT+G WV +E++ N Q +IP GFAHGF
Sbjct: 66 HYQLNPCAQGKLVRVVQGRAWDVAVDIRQNSPTFGEWVGIELTGENHRQFWIPAGFAHGF 125
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ LE NT+ +YK T++YS E + + W D I WP+ + +++KD+ P
Sbjct: 126 IALEDNTQFLYKTTNYYSKECERSIVWNDVDFAIEWPIESGLELKLTDKDKLAPAFKDAK 185
Query: 177 S 177
+
Sbjct: 186 T 186
>gi|168481330|gb|ACA24817.1| RmlC [Escherichia coli]
Length = 182
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/175 (44%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y E D G+ W D I I W + +S+KD+ P + +
Sbjct: 126 ETAEFVYKTTNYYHPESDRGIRWDDPYIGIKW--ENEYNVKLSDKDKKNPTMKDV 178
>gi|119384854|ref|YP_915910.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paracoccus denitrificans
PD1222]
gi|119374621|gb|ABL70214.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paracoccus denitrificans
PD1222]
Length = 193
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 94/183 (51%), Positives = 123/183 (67%), Gaps = 5/183 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
++ V +L R+F D RG+F +++S K L + GL FVQDNHS S GT+RGLHFQ
Sbjct: 7 SLPGVLVLVPRRFGDERGFFCESWSRKTLHDAGLDLPEFVQDNHSLSAAAGTLRGLHFQA 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRC GR+FD+AVDIR+ SP+YG W E+S NG Q++IP GF HGF+T E
Sbjct: 67 PPHAQGKLVRCGRGRLFDVAVDIRKGSPSYGRWTGCELSFENGRQLWIPPGFLHGFVTRE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+TE++YK TD+Y+ + D VAW SI I W + P +S KD P LN+ DSPF
Sbjct: 127 PDTEILYKCTDYYAPDCDGAVAWD--SIGIDWGVSG--QPILSAKDAGAPVLNEFDSPFT 182
Query: 181 YDG 183
Y+G
Sbjct: 183 YEG 185
>gi|170720580|ref|YP_001748268.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida W619]
gi|169758583|gb|ACA71899.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida W619]
Length = 182
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 86/177 (48%), Positives = 116/177 (65%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + F D RG+F +++++ + KE+ GLQ FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVFLFTPKVFGDERGFFFESFNANVFKEVTGLQPDFVQDNHSRS-VKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PP+AQ KLVR + G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGF+TL
Sbjct: 65 LPPHAQGKLVRVVQGEVFDVAVDIRRSSPTFGQWVGAVLSAENKNQLWIPPGFAHGFVTL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TDFYS + +AW D I I WP+ +PS+S KDQ L+ D
Sbjct: 125 SDTAEFLYKTTDFYSPSSERCLAWNDPEIGIEWPI--DFVPSLSGKDQLGLALSDSD 179
>gi|319957143|ref|YP_004168406.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Nitratifractor salsuginis DSM
16511]
gi|319419547|gb|ADV46657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitratifractor salsuginis DSM
16511]
Length = 191
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 84/181 (46%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + D RG+F +TY + L+E LG + F QDN S S G +RGLH+Q
Sbjct: 7 DIPDVIIVEPKIHGDERGYFVETYRADKLEEFLGYKINFCQDNESKS-SYGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR I G++ D+AVDIR++SPT+G +V++E+S N Q+ IP GFAHGF+ LE
Sbjct: 66 PPHAQTKLVRVIKGKVLDVAVDIRKSSPTFGQYVAVELSEENKKQLLIPRGFAHGFLVLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T YKV +YS E D G+A+ D I I W + L +S KD+ P L+ D FE
Sbjct: 126 DDTVFAYKVDSYYSPECDRGIAFDDPEIGIDWRIPHDKL-ILSAKDKAQPKLSDTDDLFE 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|160896725|ref|YP_001562307.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Delftia acidovorans SPH-1]
gi|160362309|gb|ABX33922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Delftia acidovorans SPH-1]
Length = 182
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F D RG+F ++++ + + G FVQDNHS S G +RGLH+Q P
Sbjct: 8 IPEVMLIEPKVFGDDRGFFLESFNQQAFNQATGTDHQFVQDNHSRS-KKGVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR + G +FD+AVDIR+ SPT+G WV E++ +N Q+++P GFAHGFM L
Sbjct: 67 PHAQGKLVRVVRGAVFDVAVDIRKGSPTFGQWVGAELTEDNHRQLWVPPGFAHGFMVLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK T FY+ + D G+AW D +I + WP LD + S+S+KD P L +
Sbjct: 127 SADFLYKATAFYAPQADRGIAWDDPAIGVQWPQLD-VELSLSDKDLKQPLLADAE 180
>gi|9957832|gb|AAG09512.1|AF279618_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 182
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/177 (44%), Positives = 113/177 (63%), Gaps = 2/177 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ F D RG+F ++++ ++ + L ++ FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVFILEPLVFVDERGFFMESFNHRVFETLLDIKVNFVQDNHSKS-TKNVVRGLHYQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCI+G ++D+AVD+R S TYGCWV +E+SA N Q++IP GFAHGF+TL
Sbjct: 66 EPYAQGKLVRCISGAVYDVAVDLRSTSQTYGCWVGVELSALNMRQLWIPEGFAHGFLTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
N E +YK T++Y+ E + + + D +DI WP+ + VS+KD+ I
Sbjct: 126 DNVEFLYKTTNYYNKESERCIRYNDPDLDIIWPISNKDNIIVSDKDKKGILFRDIKK 182
>gi|298375207|ref|ZP_06985164.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_19]
gi|301310780|ref|ZP_07216719.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
gi|298267707|gb|EFI09363.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_19]
gi|300832354|gb|EFK62985.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
Length = 193
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ + F+D+RG+F +++S + +E + FVQDN S S G +RGLHFQ+P
Sbjct: 7 DIEGVVIIEPKVFDDARGYFFESFSQREFEEKVRKINFVQDNESMSSY-GVMRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q+KLVRC+ G + D+AVDIR+ SPTYG V++E+S N Q ++P GFAHGF L
Sbjct: 66 PFTQSKLVRCVKGCVLDVAVDIRKGSPTYGKHVAVELSEENHRQFFVPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + D G+ +D+S+ I W + + +SEKD P L DSPF+Y
Sbjct: 126 IAVFQYKCDNFYAPQADGGIRIKDESLGIDWRIPMDKV-LLSEKDIKHPCLEDFDSPFDY 184
>gi|83859876|ref|ZP_00953396.1| hypothetical protein OA2633_07744 [Oceanicaulis alexandrii
HTCC2633]
gi|83852235|gb|EAP90089.1| hypothetical protein OA2633_07744 [Oceanicaulis alexandrii
HTCC2633]
Length = 186
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V+++ ++F D RGWF++T+SS L LG FVQDN S+S GT+RGLH Q
Sbjct: 6 LQIPDVKLISPKRFRDDRGWFNETWSSDKLAGLGFVQSFVQDNLSYSSASGTLRGLHCQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQ KLV + G I+D VD+R SPT+G V +E+ N Q++IP GF HGF+T
Sbjct: 66 PPCAQGKLVSVVTGAIWDFVVDVRTGSPTFGQSVRIELDENTPHQLWIPEGFLHGFLTRA 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T V YKVT YS HD +AW D + + W + D P +S+KD+ P L D F
Sbjct: 126 PDTRVSYKVTAPYSPAHDRSIAWNDPFLGLAWGVAD---PVLSDKDRQAPQLKNSDVHFT 182
Query: 181 YD 182
Y+
Sbjct: 183 YE 184
>gi|264678894|ref|YP_003278801.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni CNB-2]
gi|262209407|gb|ACY33505.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni CNB-2]
Length = 185
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 83/177 (46%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F +++ L + G F+QDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVFLIEPKVFGDARGFFLESFRQDLFNQATGTNYEFIQDNHSRS-SKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PP+AQ KLVR I+G +FD+AVDIRR+SPT+G WV E+SA N Q++IP GFAHGF+ L
Sbjct: 65 LPPHAQGKLVRVISGAVFDVAVDIRRSSPTFGQWVGAELSAENHRQLWIPPGFAHGFVVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T +Y+ E D G+ W D I I WP LD I S+SEKD++ P Q +
Sbjct: 125 SDTADFVYKTTAYYAPESDRGLLWNDPDITIAWPQLD-IEFSLSEKDRHQPAFKQAE 180
>gi|126660836|ref|ZP_01731930.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. CCY0110]
gi|126617887|gb|EAZ88662.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. CCY0110]
Length = 181
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ R F D RG+F ++Y+ K E G++ FVQDNHS S +RGLH+Q
Sbjct: 7 KIPDVVIIEPRVFGDDRGFFYESYNQKAFTEATGIERNFVQDNHSRSQK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G + D+AVDIR++S T+G WVS ++A N Q ++P GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVVVGEVLDVAVDIRKSSSTFGQWVSCLLNAENKRQFWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y+ ++ + W D + I W L D P +S+KDQ + +
Sbjct: 125 DVAEFLYKTTNYYAPPYERSILWNDPDLSIDWQLKDE--PKLSKKDQEGSSFKEAE 178
>gi|237802169|ref|ZP_04590630.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331025026|gb|EGI05082.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 181
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/176 (44%), Positives = 110/176 (62%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ R F D RG+F ++++++ +E GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVVILEPRVFGDERGFFYESFNAQAFQEATGLTRHFVQDNHSRSQQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR AG++ D+AVDIRR+SP +G WV++E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTAGKVLDVAVDIRRSSPNFGQWVAVELSAENACQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + +AW D + I W PS+S KDQ L + D
Sbjct: 125 EQAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQFDG--QPSLSAKDQQGKSLKEAD 178
>gi|159046643|ref|YP_001542312.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dinoroseobacter shibae DFL
12]
gi|157914402|gb|ABV95831.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dinoroseobacter shibae DFL
12]
Length = 184
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 89/181 (49%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++L +F D+RG+FS++YS ++L G+ FVQDNHS S GT+RGLHFQ PP
Sbjct: 8 LPGVKLLTPARFGDARGFFSESYSRRVLAGHGITLDFVQDNHSLSAQVGTVRGLHFQAPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC GR+FD+AVD+RR SPTYG W E+S NG Q+ +P GF HGF+T E +
Sbjct: 68 HAQDKLVRCGRGRLFDVAVDVRRGSPTYGQWFGAELSFENGKQLLVPAGFLHGFVTREPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TE++YK +D+Y+ E D V W S I W P +S KD L DSPF Y+
Sbjct: 128 TEIVYKCSDYYAPECDGAVHWD--SCGIDWGFEGD--PVISAKDAAAVRLADFDSPFVYE 183
Query: 183 G 183
G
Sbjct: 184 G 184
>gi|16519754|ref|NP_443874.1| dTDP-rhamnose 3,5-epimerase RmlC [Sinorhizobium fredii NGR234]
gi|2500163|sp|P55468|RMLC_RHISN RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|2182415|gb|AAB91686.1| dTDP-rhamnose 3,5-epimerase RmlC [Sinorhizobium fredii NGR234]
Length = 195
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V++++ RKF D RG+FS+ + K ++ VQDN S S GT+RGLHFQ
Sbjct: 14 LSIAEVKLIRPRKFGDCRGYFSEVFREKWFRKNVADVGLVQDNESLSAQIGTVRGLHFQL 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC G +FD+AVD+R SPTYG WVS E+S NG Q+++P GFAHGFMTL+
Sbjct: 74 EPFAQGKLVRCTRGALFDVAVDVRVGSPTYGKWVSAELSQENGAQLWVPAGFAHGFMTLK 133
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T + YKVT YS EHD G+ W D +I I WP +SEKD + P L ++ F+
Sbjct: 134 ADTVISYKVTAPYSAEHDRGLKWDDPAIGINWP--KMTTYVLSEKDSSQPSLCELPVSFQ 191
Query: 181 Y 181
Y
Sbjct: 192 Y 192
>gi|168481319|gb|ACA24807.1| RmlC [Shigella dysenteriae]
Length = 182
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/175 (44%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y E D G+ W D I I W + +S+KD+ P + +
Sbjct: 126 ETAEFVYKTTNYYHPESDRGIRWDDPYIGIKW--ENEYNVRLSDKDKKNPTMKDV 178
>gi|330806983|ref|YP_004351445.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327375091|gb|AEA66441.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 181
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ + F D RG+F ++++++ E G FVQDNHS S G +RGLH+Q
Sbjct: 8 LPDVLVIEPKVFGDDRGFFYESFNARAFAEATGCTLQFVQDNHSRSTR-GVLRGLHYQIE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR AG + D+AVDIRR+SPT+G W S+ +SA N Q+++P GFAHGF+ L
Sbjct: 67 Q-AQGKLVRVTAGEVLDVAVDIRRSSPTFGQWASVRLSAQNHRQMWVPPGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ + + W D + I W P +S KDQN L++ D
Sbjct: 126 SADFLYKTTDYYAPSAERCIRWDDPQLAIDW--EFEGAPILSAKDQNGKALHEAD 178
>gi|194334561|ref|YP_002016421.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prosthecochloris aestuarii
DSM 271]
gi|194312379|gb|ACF46774.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prosthecochloris aestuarii
DSM 271]
Length = 195
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 113/191 (59%), Gaps = 3/191 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I + + F D RG+F +++ + ++ Q FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IPDVLIFEPKVFGDERGYFFESFRQDIFEQHVGQVNFVQDNQSKSKY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR + G + D+AVDIR+ SP +G +V++++ + +++P GFAHGF+ L +
Sbjct: 67 FTQSKLVRVLDGCVIDVAVDIRKGSPWFGQYVTVKLDSVKNNMLWVPQGFAHGFVVLSED 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK ++Y+ ++D+G+ W D + I W + + VS+KD P L++ F Y+
Sbjct: 127 AVFAYKCDNYYAPDYDAGIRWNDPELSIDWAIPVADI-QVSQKDATQPLLDE-SYLFSYE 184
Query: 183 GLPLLSLNMER 193
++ +R
Sbjct: 185 SFKKEAVYPQR 195
>gi|326391871|ref|ZP_08213383.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter
ethanolicus JW 200]
gi|325992089|gb|EGD50569.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter
ethanolicus JW 200]
Length = 183
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++T FED+RG+F ++Y+ + K G+ VFVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLYIIETGIFEDNRGYFMESYNYRDFKAAGIDAVFVQDNQSKSKK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R++S TYG WV + +S N Q YIP GFAHGF+ L
Sbjct: 68 KHPQGKLVRVLKGEVFDVAVDLRKDSKTYGKWVGVILSDKNKRQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TDFY + + G+ W D I+I WPL +SEKD+ P L +
Sbjct: 128 EAEFFYKCTDFYYPDDEGGIIWNDPDINIQWPLDGIEEIILSEKDKKWPRLRDL 181
>gi|28872505|ref|NP_795124.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213970795|ref|ZP_03398919.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato T1]
gi|301383029|ref|ZP_07231447.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato Max13]
gi|302063434|ref|ZP_07254975.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato K40]
gi|302130652|ref|ZP_07256642.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855760|gb|AAO58819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213924467|gb|EEB58038.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato T1]
Length = 181
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++++ +E GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPKVFGDERGFFYESFNARAFQEATGLTRQFVQDNHSRSQR-GVLRGLHYQIE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 67 N-AQGKLVRVTVGKVLDVAVDIRRSSPNFGRWVGVELSAENARQLWVPEGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W PS+S KDQ L D
Sbjct: 126 HAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQFDGE--PSLSAKDQQGKSLKDAD 178
>gi|37523271|ref|NP_926648.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gloeobacter violaceus PCC
7421]
gi|35214275|dbj|BAC91643.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gloeobacter violaceus PCC
7421]
Length = 186
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 82/187 (43%), Positives = 111/187 (59%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ + F D+RG+F ++Y ELG+ D FVQDN S S G +RGLH+Q
Sbjct: 8 LPGVYVIEPKVFGDARGYFYESYHRAKFAELGIPDEFVQDNCSRSAR-GVLRGLHYQ-LR 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ QAKL R + G +FD+AVDIR+ SPT+G W + +SA N QIY+P GFAHGF L +
Sbjct: 66 FPQAKLCRVVEGEVFDVAVDIRKGSPTFGQWAGVVLSAENRHQIYVPAGFAHGFAVLSES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E +YK +DFY E + GV W D I I WP+ P +S KDQ LNQ D +
Sbjct: 126 AEFLYKCSDFYHPEDEQGVLWNDPDIGIPWPVE---APVLSGKDQKYLPLNQTDP----E 178
Query: 183 GLPLLSL 189
LP+
Sbjct: 179 RLPVYHQ 185
>gi|298484711|ref|ZP_07002813.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160744|gb|EFI01763.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 181
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F ++++++ + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNARAFQAATGLTREFVQDNHSRSQQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
N E +YK TD+Y+ + +AW D + I W P++S KDQ L + D
Sbjct: 125 ENAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQFDG--QPNLSAKDQQGKRLEEAD 178
>gi|213962325|ref|ZP_03390588.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sputigena
Capno]
gi|213954991|gb|EEB66310.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sputigena
Capno]
Length = 182
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ + F D RG+F +++S + E FVQDN S S G +RGLHFQ+P
Sbjct: 7 KLEGVVIIEPQVFFDDRGYFFESFSQQRFNEQVAPITFVQDNESKSSY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + G++ D+AVD+R+ SPT+G + S+ +S N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVVKGKVLDVAVDLRKGSPTFGQYESVVLSEENKRQFFIPQGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK ++Y+ + + V W D +I I W L + + +S KD+ P L+Q+
Sbjct: 126 EAIFQYKCDNYYAPQSEGSVRWNDPTIAIDWQLPEKDI-ILSAKDEKAPLLSQL 178
>gi|152971027|ref|YP_001336136.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955876|gb|ABR77906.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 184
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + R F D+RG+F +++SSK+ E G Q FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPEVLIFEPRVFGDARGFFFESFSSKVFNEAVGRQVEFVQDNHSQSQK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+ G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGFM L
Sbjct: 66 DPHAQGKLVRCVEGEVFDVAVDIRRSSPTFGKWVGAVLSAENKRQLWIPEGFAHGFMALS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y+ + + + W D I I WP L S+SEKD L +
Sbjct: 126 DTVQFVYKATNYYAPQSERSIIWNDPEIGIDWPALGDCALSLSEKDLQAHTLATAE 181
>gi|87201249|ref|YP_498506.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Novosphingobium
aromaticivorans DSM 12444]
gi|87136930|gb|ABD27672.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Novosphingobium
aromaticivorans DSM 12444]
Length = 181
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I +L+ R F D RG+F ++++++ + GL FVQDNHS S G +RG+HFQ P
Sbjct: 7 DIEGPLVLEPRVFGDERGFFMESWNAEAFAKAGLDLPFVQDNHSRSQK-GVLRGMHFQNP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD VD+R++SPT+G W + +SA N ++P GFAHGF+TLE
Sbjct: 66 G-PQGKLVRVVRGAVFDAVVDLRKSSPTFGKWTGVVLSAENKRMFWVPEGFAHGFLTLED 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+T+ +YK T Y+ +H+ +AW D + I WPL D I P +S KD + L +
Sbjct: 125 DTDFLYKCTAPYAPQHECSLAWDDPDVGIDWPL-DGIEPKLSAKDADGVRLADVK 178
>gi|332995215|gb|AEF05270.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Alteromonas sp. SN2]
Length = 181
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+I++ + F D RG+F +T+ + K+ FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPKVFGDERGFFLETFRTDWFKKECADVEFVQDNHSKSSQ-GILRGLHYQ-L 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G ++D+AVD+R++SPTYG WV + +SA N Q+++P GFAHGF
Sbjct: 65 EQTQGKLVRVVSGEVYDVAVDMRKDSPTYGKWVGVLLSAENKRQLWVPAGFAHGFYVTSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ E +YK TD+Y E + V + D +++I WPL++ PS+S KD+N +
Sbjct: 125 SAEFVYKCTDYYHPESEVSVKFNDPTLNIDWPLVNGEKPSLSGKDENGVAFVDAPT 180
>gi|121533495|ref|ZP_01665323.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosinus carboxydivorans
Nor1]
gi|121308054|gb|EAX48968.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosinus carboxydivorans
Nor1]
Length = 186
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 78/176 (44%), Positives = 110/176 (62%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +++ + D+RG+F +T+++ +E GL + FVQDN SFS G +RGLHFQ
Sbjct: 7 KLSGVLLIEPDVYGDNRGYFLETWNAARYREYGLPEKFVQDNLSFSRR-GVLRGLHFQ-N 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLV I G +FD+AVDIR SPT+G WV + +S++N Q+YIP GFAHGF L
Sbjct: 65 PNPQGKLVYVIQGEVFDVAVDIRPGSPTFGQWVGVTLSSDNKRQLYIPEGFAHGFCVLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
YK TDFY+ + + G+ W D I I WP+ + P +S+KD+ P L I S
Sbjct: 125 TALFAYKCTDFYNPQAEGGIIWNDFDIGIAWPVSE---PIISDKDKANPRLRDIPS 177
>gi|9957818|gb|AAG09501.1|AF279615_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 179
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 80/172 (46%), Positives = 114/172 (66%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFSDERGFFMESFNQKVFEEAVGRKIEFVQDNHSKS-TKGVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCIAG +FD+AVDIR++S T+G WV + IS+ N ++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCIAGEVFDVAVDIRKDSETFGKWVGVNISSENKRPLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + +YK +++YS H+ G+ W D +I+I WP+ I +SEKD LP
Sbjct: 126 DSADFLYKTSNYYSPIHERGIVWNDPTININWPI--NIDKILSEKDTILPKF 175
>gi|78049263|ref|YP_365438.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037693|emb|CAJ25438.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 185
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D+RG+F +T++++ K+ GL FVQ N S S +RGLH+Q P
Sbjct: 8 LPGCVVIEPSVFGDARGYFFETWNAERFKQHGLPQNFVQSNVSTS-AKSVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV +AG ++D+AVD+R SP +G W ++ +SA N Q++IP GFAHGF L
Sbjct: 67 -PQGKLVSVLAGEVYDVAVDLRSGSPHFGRWTAVLLSAENRRQVWIPEGFAHGFAVLSET 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ + P +S KD PFL + D
Sbjct: 126 ALFSYLCTDIYVNEADAGVRWDDAAIGIDWPISN---PVLSTKDAAAPFLADVPP----D 178
Query: 183 GLPLLSL 189
LP
Sbjct: 179 RLPTFPA 185
>gi|146309305|ref|YP_001189770.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas mendocina ymp]
gi|145577506|gb|ABP87038.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas mendocina ymp]
Length = 182
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++++ E G+ FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPQVFGDERGFFYESFNARRFAEATGVNREFVQDNHSRSAR-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR AG ++D+AVD+RR+SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 66 QQAQGKLVRASAGEVYDVAVDVRRSSPNFGKWVGVHLSAENKRQLWVPEGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y+ H+ + W D + I WPL D + P +S KDQ L ++
Sbjct: 126 YAEFLYKTTDYYAPAHERCIRWDDAHLAIDWPL-DGLTPQLSAKDQQGLSLQDAET 180
>gi|306820759|ref|ZP_07454385.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551208|gb|EFM39173.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 185
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ F D+RG+F +TY+ K G+ FVQDN S S G +RGLHFQ
Sbjct: 11 IKGMYVIEPEIFGDNRGYFMETYNENDFKNAGIDVEFVQDNES-SSKKGVLRGLHFQTKN 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G +FD+ VD+R+NSPTYG W +S N Q+YIP GFAHGF+ L
Sbjct: 70 V-QGKLVRVLSGEVFDVGVDLRKNSPTYGKWYGEILSCENKKQLYIPEGFAHGFVVLSDM 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK T+FY + G+AW D I I W + D + +S+KD+ L + F
Sbjct: 129 ATFAYKCTNFYDPSSEGGIAWNDPDIAIDWHISDDMEIILSDKDKVRKTLKEQKIEF 185
>gi|71733249|ref|YP_272458.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483684|ref|ZP_05637725.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289626550|ref|ZP_06459504.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649196|ref|ZP_06480539.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71553802|gb|AAZ33013.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326581|gb|EFW82631.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331097|gb|EFW87069.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330869503|gb|EGH04212.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330871968|gb|EGH06117.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330892261|gb|EGH24922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv. mori
str. 301020]
gi|331012162|gb|EGH92218.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 181
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F ++++++ + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNARAFQAATGLTREFVQDNHSRSQQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W P++S KDQ L + D
Sbjct: 125 EHAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQFDG--QPNLSAKDQQGKRLKEAD 178
>gi|225016237|ref|ZP_03705429.1| hypothetical protein CLOSTMETH_00140 [Clostridium methylpentosum
DSM 5476]
gi|224950995|gb|EEG32204.1| hypothetical protein CLOSTMETH_00140 [Clostridium methylpentosum
DSM 5476]
Length = 182
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 101/173 (58%), Gaps = 2/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I+ +F+D+RG+F +TY+ + GL FVQDN S S G +RGLHFQ
Sbjct: 11 IKDLYIIDNARFDDARGYFMETYNKQDFDAAGLTMNFVQDNQSKSTK-GVLRGLHFQ-KT 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR G ++D+AVD+R S TYG W + +S N Q Y+P GFAHGF+ L
Sbjct: 69 HPQGKLVRVTKGAVYDVAVDLRPGSETYGKWHGVTLSEENHRQFYVPEGFAHGFLVLSDV 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TDFY E + + W D + I WP+ + + +S+KD+ P L I
Sbjct: 129 AEFVYKCTDFYHPEDEGALFWNDPDVGIDWPITEDMTILLSDKDKKNPLLKDI 181
>gi|224023786|ref|ZP_03642152.1| hypothetical protein BACCOPRO_00502 [Bacteroides coprophilus DSM
18228]
gi|224017008|gb|EEF75020.1| hypothetical protein BACCOPRO_00502 [Bacteroides coprophilus DSM
18228]
Length = 189
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I IL+ R F D RG+F +++S + E + FVQDN S S G +RGLHFQ+P
Sbjct: 7 SIEGPLILEPRIFRDDRGYFFESFSQRTFNEEVREIHFVQDNESKSSY-GVVRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q+KLVR I G + D+AVDIRR SPT+G +V +E++ N Q ++P GFAHGF L
Sbjct: 66 PFTQSKLVRVIQGAVLDVAVDIRRGSPTFGQYVKVELTGENHRQFFVPRGFAHGFSVLTD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D + I W + + +SEKD++ P L + F++
Sbjct: 126 EVVFQYKCDNFYAPQSEGAIAWDDPDLGIDWQIPADKV-ILSEKDKHHPRLKDAEWLFDW 184
Query: 182 DG 183
+
Sbjct: 185 NE 186
>gi|73809580|gb|AAZ85706.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
Length = 178
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ +YK T++Y E +SG+ W D +IDI WP+ + P +S KD +I
Sbjct: 126 ETADFLYKTTNYYHPESESGLLWNDYTIDIAWPIENE--PLLSAKDLKARRFLEI 178
>gi|330966030|gb|EGH66290.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 181
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++++ ++ GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPKVFGDERGFFYESFNARAFQQATGLTRQFVQDNHSRSQR-GVLRGLHYQIE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR G + D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 67 N-AQGKLVRVTVGTVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W PS+S KDQ L D
Sbjct: 126 HAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQFDGE--PSLSAKDQQGKSLKDAD 178
>gi|148658186|ref|YP_001278391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseiflexus sp. RS-1]
gi|148570296|gb|ABQ92441.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseiflexus sp. RS-1]
Length = 193
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I++ F D RG+F ++++ + G+ FVQDNHS S +RG H+Q
Sbjct: 10 LPGAIIIEPACFRDERGFFLESWNRRDFAAHGITIDFVQDNHSRSVKH-VLRGFHYQDMT 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLVRC G + D+ VD+R SPT+G W ++E++A N LQ+ +P GF H F+TL
Sbjct: 69 APMVKLVRCTLGSVLDVIVDLRVGSPTFGRWHAVELTAENMLQLLVPVGFGHAFLTLSDV 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ-IDSP-FE 180
E+ YK + +Y+ + + W D I + WP+ + P +S++D+ L + ++ P F
Sbjct: 129 AEIQYKCSAYYTPSAEGVITWNDPDIGVDWPVTE---PILSQRDRRGMRLAEYLERPAFR 185
Query: 181 YDG 183
++
Sbjct: 186 FEE 188
>gi|300853758|ref|YP_003778742.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium ljungdahlii DSM
13528]
gi|300433873|gb|ADK13640.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium ljungdahlii DSM
13528]
Length = 191
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 79/177 (44%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++T F D+RG+F +TY+ K +GL VFVQDN S S G +RGLHFQ
Sbjct: 13 EIEGVYIIETGIFGDNRGYFMETYNYSDFKAVGLDMVFVQDNQSKSKK-GVLRGLHFQ-K 70
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+Q KLVR + G++FD+AVD+R S TYG W+ + +S N Q YIP GFAHGF+ +
Sbjct: 71 NYSQGKLVRVVKGKVFDVAVDLRDGSSTYGKWIGVTLSEENRKQFYIPKGFAHGFLVISD 130
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E YK T+FY E + G+ W D I+I WPL SE+D+ P L + +
Sbjct: 131 EAEFCYKCTEFYHPEDEGGIIWNDPDINIKWPLEGIDNIIFSERDKLWPTLKECKNN 187
>gi|291460665|ref|ZP_06600055.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oribacterium sp. oral taxon
078 str. F0262]
gi|291416624|gb|EFE90343.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oribacterium sp. oral taxon
078 str. F0262]
Length = 213
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 106/197 (53%), Gaps = 21/197 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ DSRG+F +TY+ + ++E GL FVQDN S S G +RGLHFQ
Sbjct: 20 IRGLYIIEPAVHGDSRGYFMETYNQRDMEEAGLNMRFVQDNQSMSVR-GVLRGLHFQ-KQ 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I GR++D+AVD+R S +YG +E++A N Q YI GFAHGF+ L
Sbjct: 78 YPQGKLVRVIRGRVYDVAVDLREGSESYGEHFGVELTAENHRQFYISEGFAHGFLVLSEE 137
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKVTDFY + G+AW D + I WP L D +SEKD
Sbjct: 138 AEFCYKVTDFYRPGDEGGIAWNDPELHIDWPELTGTYPGSADASSYCLKDGTKLILSEKD 197
Query: 167 QNLPFLNQIDSPFEYDG 183
Q L + F + G
Sbjct: 198 QKWLGLRE---SFHFTG 211
>gi|260887357|ref|ZP_05898620.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sputigena ATCC
35185]
gi|330838667|ref|YP_004413247.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sputigena ATCC
35185]
gi|260862895|gb|EEX77395.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sputigena ATCC
35185]
gi|329746431|gb|AEB99787.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas sputigena ATCC
35185]
Length = 190
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 85/181 (46%), Positives = 117/181 (64%), Gaps = 5/181 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V IL+ + F D+RGWF +++S K ++E GL FVQDN SFS + GT+RGLH+Q+ P
Sbjct: 8 LKGVFILEPQVFGDARGWFMESWSKKKMEEAGLFYDFVQDNQSFSAEKGTLRGLHYQKNP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQAKL+RC G I D+AVDIR+ SP Y WVS+ +SA N Q+ IP GFAHGF+TL +
Sbjct: 68 MAQAKLLRCTRGEILDVAVDIRKGSPQYAKWVSVRLSAENKRQLMIPRGFAHGFITLTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS--PFE 180
EV YK ++Y+ E D + W D +I + W + T +S KD+ P L + +S F
Sbjct: 128 VEVQYKADNYYAPECDGNILWSDPAIGVDWEIAPT---VLSAKDEAAPTLAERESQLNFV 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|254516003|ref|ZP_05128063.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium NOR5-3]
gi|219675725|gb|EED32091.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium NOR5-3]
Length = 182
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +L F D RG+F +++++++ ++ G FVQDNHS S G +RGLH+Q
Sbjct: 8 LAGVYLLTPSVFGDERGFFVESWNAEVFRDAGFDLNFVQDNHSRSAQ-GILRGLHYQ-TN 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR +G +FD+AVD+RR+SPT G W + + A + +++P GFAHGF
Sbjct: 66 HTQGKLVRVTSGSVFDVAVDMRRDSPTLGQWYGVTLDAKSQQMLWVPPGFAHGFYVTSEF 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK TD Y + + +AW D SI I WPL++ PS+S KDQ
Sbjct: 126 ADFQYKCTDKYDPKSEVSIAWDDPSIGIEWPLIEGKAPSLSAKDQTGLAFADAP 179
>gi|29726024|gb|AAO88950.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 183
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + F D RG+F +T+ + +E G+ FVQDN S S G +RGLHFQ+
Sbjct: 7 KIQDLLIIEPKVFGDDRGFFYETFQKQRYREAGIDAEFVQDNRSRSSK-GVLRGLHFQKT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+Q KLV G +FD+AVD+R NSPT+G + ++ ++ N LQ Y+P GFAHGF L
Sbjct: 66 K-SQGKLVTVTDGEVFDVAVDLRPNSPTFGQYETIILTGKNKLQFYVPPGFAHGFCVLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ YK TD+Y +SG+ W D S++I WP+ + P +SEKD+ P L I +
Sbjct: 125 TADFQYKCTDYYDPSDESGLLWNDASLNIQWPIEN---PLLSEKDKLQPELAAIRNN 178
>gi|328957829|ref|YP_004375215.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Carnobacterium sp. 17-4]
gi|328674153|gb|AEB30199.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Carnobacterium sp. 17-4]
Length = 216
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 79/186 (42%), Positives = 114/186 (61%), Gaps = 1/186 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N+ V+I++ F D RG+F+++Y+ + E G+ F+QDNHS S + G +RG+HFQ
Sbjct: 7 NLQDVKIIEMAVFGDHRGFFTESYTKEKFLEAGIIIDFIQDNHSLSVEPGVLRGMHFQTL 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR G I+D+ VD+R SPTYG W +S N Q+ +P GFAH F+TL
Sbjct: 67 EKAQTKLVRATTGVIYDVIVDMRVGSPTYGQWEGYILSEFNHRQLLVPKGFAHAFVTLTP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N V YKV +++S EHD G+A+ D +++I WP+ L +SEKD P L + ++PF Y
Sbjct: 127 NCNVQYKVDEYFSSEHDGGIAFDDPALNIQWPMPIDKL-VLSEKDTKHPKLAEFNNPFVY 185
Query: 182 DGLPLL 187
L
Sbjct: 186 KKFKLG 191
>gi|260162574|dbj|BAI43815.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Klebsiella pneumoniae]
Length = 184
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 111/176 (63%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + R F D+RG+F +++SSK+ E G Q FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPEVLIFEPRVFGDARGFFFESFSSKVFNEAVGRQVEFVQDNHSQSQK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+ G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGFM L
Sbjct: 66 DPHAQGKLVRCVEGEVFDVAVDIRRSSPTFGKWVGAVLSAENKRQLWIPEGFAHGFMALS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y+ + + + W D I I WP L S+SEKD L +
Sbjct: 126 DTVQFVYKATNYYAPQSERSIIWNDPEIGIDWPALSDCALSLSEKDLQAHTLATAE 181
>gi|167038025|ref|YP_001665603.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116438|ref|YP_004186597.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856859|gb|ABY95267.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929529|gb|ADV80214.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 183
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++T FED+RG+F ++Y+ K GL VFVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLYIIETGIFEDNRGYFMESYNYNDFKVAGLDMVFVQDNQSKSKR-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R+NS TYG WV + +S N Q YIP GFAHGF+ L
Sbjct: 68 KHPQGKLVRVLKGEVFDVAVDLRKNSKTYGKWVGVILSEENKKQFYIPEGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK T+FY + + G+ W D I+I WPL +SEKD+ P L +
Sbjct: 128 EAEFFYKCTNFYYPDDEGGIIWNDPDINIQWPLDGIEEIILSEKDKKWPRLKDL 181
>gi|88802242|ref|ZP_01117769.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaribacter irgensii 23-P]
gi|88781100|gb|EAR12278.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaribacter irgensii 23-P]
Length = 184
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ F D RG+F ++++ + +E F+QDN S S G +RGLHFQ+
Sbjct: 7 EIQDVYIIEPSIFGDERGYFLESFNLEKFEENIYPIKFLQDNESKSSK-GVLRGLHFQKT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ QAKLVRCI GR+ D+AVD+R+ SPTYG V++E+S N Q+++P GFAHGF L
Sbjct: 66 PFDQAKLVRCIVGRVMDVAVDLRKGSPTYGKHVAIELSGENKKQLFVPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YKV + Y+ E+D G+ + D+ ++I W L + + +SEKD++LPF +DSPF +
Sbjct: 126 TAVFAYKVDNTYAPEYDFGIRYNDEDLNIDWGLAENEV-QLSEKDKDLPFFKNLDSPFNF 184
>gi|262192433|ref|ZP_06050585.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae CT 5369-93]
gi|262031697|gb|EEY50283.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae CT 5369-93]
Length = 178
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 110/176 (62%), Gaps = 6/176 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G +FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTLFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D+ + I WP+ P +SEKD L +I
Sbjct: 125 SEEAEFVYKCTDYYNPKAEVSIRWNDEKLAIEWPIS--TKPQLSEKDTQALQLAKI 178
>gi|187880505|gb|ACD37023.1| RmlC [Shigella boydii]
Length = 179
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 110/173 (63%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T +Y E + G+ W D++I + WPL +S KD P N
Sbjct: 126 ETAEFVYKTTQYYHPECERGIRWDDENIGVDWPLS--TDLILSFKDTKHPKFN 176
>gi|160863322|gb|ABX51888.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Cronobacter sakazakii]
Length = 180
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 118/175 (67%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I+ V I + + F D RG+F ++++ K + +G + FVQDNHS S CG +RGLH+Q
Sbjct: 7 DISDVLIFEPKVFGDDRGFFFESFNQKTFMEAVGRKVTFVQDNHSKS-ACGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR+NS T+G WV + +SA+N Q++IP GFAHGF+ L
Sbjct: 66 DPYAQGKLVRCVVGEVFDVAVDIRKNSTTFGKWVGVNLSADNKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y+ E D G+ W D+ I I WPL P +S KD+N LN+I
Sbjct: 126 ETAEFVYKTTNYYNPESDRGIIWNDEDISIEWPL--VRDPILSHKDKNQKKLNEI 178
>gi|120612800|ref|YP_972478.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax citrulli AAC00-1]
gi|120591264|gb|ABM34704.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax citrulli AAC00-1]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V +L+ + F D+RG+F ++++ + E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPDVVVLEPKVFGDARGFFFESFNQRAFDEATGSRHAFVQDNHSRSAR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVD+RR+SPT+G WV E+S N Q+++P GFAHGF+ L
Sbjct: 66 RQ-PQGKLVRVVRGTVFDVAVDLRRSSPTFGQWVGEELSEENQRQMWVPPGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ EH+ +AW D + I W PS+S KD L + +
Sbjct: 125 ESADFLYKTTDYYAPEHERCIAWNDPELGIDWRFAGE--PSLSAKDAKGAALREAE 178
>gi|329912057|ref|ZP_08275652.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545743|gb|EGF30878.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacteraceae bacterium
IMCC9480]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ F D RG+F ++++ + EL GL FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVLIIEPTVFGDERGFFFESFNQRRFFELTGLSVDFVQDNHSQSAK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVDIRR+SPT+G +V +E+SANN ++IP GFAHGF+ +
Sbjct: 66 QQ-PQGKLVRVVQGVVFDVAVDIRRSSPTFGKYVGVELSANNKRMVWIPPGFAHGFVVMS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD++ + +AW D SI I WP+ +P++SEKD+ L+ +
Sbjct: 125 EVAEFLYKTTDYWVPGFERSIAWNDPSIGIDWPIEG--VPTLSEKDRLSKLLSDAEC 179
>gi|307825026|ref|ZP_07655248.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacter tundripaludum
SV96]
gi|307734073|gb|EFO04928.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacter tundripaludum
SV96]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ F D RG+F ++++ + EL G FVQDNHS S +RGLH+Q
Sbjct: 8 IPDVLIIEPNVFGDERGFFFESFNRRRFAELTGCDVDFVQDNHSRSVK-NVLRGLHYQIR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIRR+SP++G V LE+SA N ++IP GFAHGF+ +
Sbjct: 67 Q-PQGKLVRVVQGAVFDVAVDIRRSSPSFGQSVGLELSAENKRMLWIPEGFAHGFVVISE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+++ E + +AW D +I I WPL P++S KDQ L + +
Sbjct: 126 TAEFLYKTTDYWAPEFERSIAWNDPAIGIQWPLQGE--PALSVKDQQATSLAEAE 178
>gi|157158061|ref|YP_001463389.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli E24377A]
gi|157080091|gb|ABV19799.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli E24377A]
Length = 182
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK T++Y E D G+ W D+ + ITWP + + +S KDQ P
Sbjct: 126 ETAEFVYKTTNYYHPESDRGIRWDDEELSITWPRGNELN--LSNKDQQHPSFQN 177
>gi|301632557|ref|XP_002945349.1| PREDICTED: dTDP-4-dehydrorhamnose 3,5-epimerase-like [Xenopus
(Silurana) tropicalis]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 75/182 (41%), Positives = 112/182 (61%), Gaps = 8/182 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +L+ + F D+RG+F ++++ K ++ G VFVQDNHS S G +RGLH+Q
Sbjct: 6 LTIPDVVLLEPKVFGDARGFFFESFNQKAFQQATGSDGVFVQDNHSRSSR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G ++D+AVD+R+++PT+G WV E+S N Q+++P GFAHGF+ L
Sbjct: 65 IAQ-PQGKLVRVARGSVWDVAVDLRKSAPTFGQWVGAELSEENQRQLWVPPGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ + +YK TD+Y+ +H+ +AW D + I WP T PS+S KD L Q F
Sbjct: 124 SDSADFLYKTTDYYAPQHERCIAWNDAQLAIQWPYAGT--PSLSAKDAQGVSLAQA---F 178
Query: 180 EY 181
Y
Sbjct: 179 IY 180
>gi|291568776|dbj|BAI91048.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arthrospira platensis
NIES-39]
Length = 182
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ + F D RG+F ++++ K+ ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVFLVEPKVFGDHRGFFFESFNQKVFTEKTGVTTDFVQDNHSRSSQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KL+R + G +FD+AVDIR++SPT+G WV +SA N Q++IP GFAHGF+
Sbjct: 66 QQT-QGKLLRVVLGEVFDVAVDIRKSSPTFGQWVGYYLSAENKQQLWIPPGFAHGFLVTS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD+Y+ +++ + W D I I WPL +++ P +SEKD+N L +
Sbjct: 125 PVAEVLYKTTDYYAPQYERSLLWNDPDIAIEWPL-ESLEPKLSEKDKNAHTLTNAE 179
>gi|94497766|ref|ZP_01304333.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingomonas sp. SKA58]
gi|94422815|gb|EAT07849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingomonas sp. SKA58]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I I++ R F D RG+F ++Y++ K GL FVQDNHS S G +RGLHFQ P
Sbjct: 8 IPGPVIIEPRVFGDERGFFYESYNAGAFKAAGLDLNFVQDNHSKS-AKGVLRGLHFQ-NP 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR AGR++D+AVDIRR+SP +G WV +E+SA N ++P GFAHGF+ LE
Sbjct: 66 NPQGKLVRVTAGRVWDVAVDIRRSSPHFGKWVGVELSAANKRMFWVPEGFAHGFIALEDG 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
TE +YK T Y + + W D ++ I WPL + + P +S KD L++I+
Sbjct: 126 TEFLYKCTATYDPSAEHSLMWNDPAVGIEWPL-EGLEPQLSGKDAQGKALSEIE 178
>gi|303244741|ref|ZP_07331071.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanothermococcus
okinawensis IH1]
gi|302484875|gb|EFL47809.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanothermococcus
okinawensis IH1]
Length = 185
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V ++K + F D RG+F +TY + +++G+ F+QDNHS S G +RGLHFQ+
Sbjct: 9 KIPEVILIKPKVFGDERGFFLETYKKEDFEKVGINGEFIQDNHSKSCY-GVLRGLHFQKE 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQAK+VRCI G I+D+AVD+RR+SPT+G WV +S N Q+YIP GFAHGF L
Sbjct: 68 PYAQAKIVRCIRGVIYDVAVDLRRSSPTFGQWVGAVLSEYNKHQLYIPRGFAHGFCVLSG 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
EV+YKV + Y+ E++ GV W D I I W + + P +S+KD+ L ++D
Sbjct: 128 EAEVVYKVDNKYAPEYECGVIWNDGDIGIDWLIDE---PILSDKDKQWHTLKELDKK 181
>gi|163859123|ref|YP_001633421.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella petrii DSM 12804]
gi|163262851|emb|CAP45154.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella petrii]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 5/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I V +++ D+RG+F ++Y++ L LG +FVQDN S S +RGLH+Q
Sbjct: 6 LSIPDVLLIEPEVHADARGYFFESYNAARLQAALGRAPMFVQDNQSRSLRH-VVRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
QAKLVR +AG +FD+AVD+RR SPT+G W +SA N Q+++P GFAHGFM L
Sbjct: 65 IRQ-PQAKLVRVVAGEVFDVAVDLRRASPTFGQWAGAVLSAENKCQLWVPEGFAHGFMAL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E +YK +D+Y+ H+ V W D I I WP D + VSEKD+ L D+
Sbjct: 124 SDVAETLYKASDYYAPAHERCVRWDDPDIGIAWPARDDV--IVSEKDRRGVALRDADTY 180
>gi|149195145|ref|ZP_01872236.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caminibacter mediatlanticus
TB-2]
gi|149134697|gb|EDM23182.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caminibacter mediatlanticus
TB-2]
Length = 187
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ + F D RG+F +T+ L ++ + F+QDN S S G +RGLH+Q P
Sbjct: 7 KLPEVVIIEPKVFGDDRGYFMETFRQDLFEKNIRKIDFIQDNESKSKR-GVLRGLHYQLP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR I G++ D+AVDIR+NSPT+ +V++E+S N Q++IP GFAHGF+ L
Sbjct: 66 PFAQSKLVRVIKGKVLDVAVDIRKNSPTFKQYVAVELSEENKRQLFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV ++YS EHD + + D I I W L +SEKD+N PFL +
Sbjct: 126 EAIFTYKVDNYYSPEHDRSIRFDDLEIGIDWNFPKEEL-IISEKDKNAPFLKDAE 179
>gi|332877115|ref|ZP_08444866.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332685005|gb|EGJ57851.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 190
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F D+RG+F +++S + L FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEGVVIIEPRLFNDARGYFFESFSQRDFDRLVRTVHFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G V++E++ N Q +IP GFAHGF L
Sbjct: 67 YAQSKLVRVIKGAVLDVAVDIRKGSPTFGQHVAVELTEENHRQFFIPRGFAHGFSVLSPE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D +DI W + + +SEKD++ P L + F+Y
Sbjct: 127 VIFQYKCDNFYAPQSEGALAWDDPDLDINWRIPSDKI-ILSEKDKHHPRLKDAEWLFDY 184
>gi|224538134|ref|ZP_03678673.1| hypothetical protein BACCELL_03025 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520262|gb|EEF89367.1| hypothetical protein BACCELL_03025 [Bacteroides cellulosilyticus
DSM 14838]
Length = 193
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI+ + I++ + DSRG+F ++++ K +E + FVQDN S S G +RGLHFQ+P
Sbjct: 7 NIDQIAIIEPQIHSDSRGYFFESFNQKEFEEKVCKTTFVQDNESKSSY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + G + D+AVDIR SPT+G VS+E++ +N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVVKGAVLDVAVDIRIGSPTFGQHVSIELTEDNHRQFFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK + Y+ +++ +AW D + I W + + +SEKD+ P L + + F+Y
Sbjct: 126 EVIFQYKCDNLYAPQYEGAIAWDDPDLGIDWHIPKDKM-LLSEKDKTHPRLKEAEWLFDY 184
Query: 182 DGL 184
+
Sbjct: 185 SDM 187
>gi|1314580|gb|AAC44073.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Sphingomonas sp. S88]
Length = 188
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 84/181 (46%), Positives = 115/181 (63%), Gaps = 1/181 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V K+ D RG+FS+ + L G++ +VQDN SFS GTIRGLH Q PP
Sbjct: 9 LSGVIEFTPPKYGDHRGFFSEVFKQSTLDAEGVEARWVQDNQSFSAAPGTIRGLHLQAPP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVR + G I+D+AVDIRR SPTYG WV +E+SA+ Q+ +P G+AHGFMTL +
Sbjct: 69 FAQAKLVRVLRGAIYDVAVDIRRGSPTYGQWVGVELSADKWNQLLVPAGYAHGFMTLVPD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E++YKV+ YS E + + W D + ITWP + P +SEKD + ++PF Y
Sbjct: 129 CEILYKVSAKYSKESEMAIRWDDPDLAITWP-DIGVEPVLSEKDAVATPFAEFNTPFFYQ 187
Query: 183 G 183
G
Sbjct: 188 G 188
>gi|327482466|gb|AEA85776.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas stutzeri DSM
4166]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I V +L R F D RG+F ++++ + + +G FVQDNHS S +RGLH+Q
Sbjct: 6 LDIPEVLLLVPRVFGDERGFFFESFNQRTFEQAIGSPASFVQDNHSRSAR-NVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G ++D+AVDIRR+SPT+G WV +SA N Q++IP GFAHGF+ L
Sbjct: 65 IAQ-PQGKLVRVVVGEVYDVAVDIRRSSPTFGKWVGAILSAENNHQLWIPQGFAHGFLVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ EH+ +AW D + I WPL PS+S KD L Q +
Sbjct: 124 SETAEFLYKTTDYYAPEHERCIAWNDPHLAIQWPL--EQAPSLSNKDSQGLPLAQAE 178
>gi|282898469|ref|ZP_06306459.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Raphidiopsis
brookii D9]
gi|281196635|gb|EFA71541.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Raphidiopsis
brookii D9]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ + F D RG+F ++++ KL + G+ FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVLLIEPQVFGDERGFFYESFNEKLFAQKTGISPHFVQDNHSRSGK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR AG +FDIAVD+R++SPT+ WV + IS+ N Q++IP GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVTAGEVFDIAVDLRKSSPTFSQWVGVYISSANKHQLWIPPGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD+Y+ + + + W D + I+WP+ D P VS KD++ +Q +
Sbjct: 125 EYADFLYKTTDYYAQKSERTILWNDPDLAISWPIGDE--PIVSSKDKSAQLFSQAE 178
>gi|82543416|ref|YP_407363.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella boydii Sb227]
gi|16611726|gb|AAL27313.1|AF402312_5 dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella boydii]
gi|81244827|gb|ABB65535.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella boydii Sb227]
gi|167410112|gb|ABZ79716.1| RmlC [Escherichia coli]
gi|332097110|gb|EGJ02093.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella boydii 3594-74]
Length = 189
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 80/183 (43%), Positives = 116/183 (63%), Gaps = 3/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EISDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC G +FD+AVDIR++SPT+G WV + +SA N Q++IP G AHGF+ L
Sbjct: 66 EPYAQGKLVRCAVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGLAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E +YK T++Y E D G+ W D ID+ WPL P +S KD+ ++ + +
Sbjct: 126 ETAEFLYKTTNYYHPESDRGIIWDDPDIDVKWPLS-IHKPILSIKDEKQKMFKEMIALEK 184
Query: 181 YDG 183
++G
Sbjct: 185 WNG 187
>gi|21673145|ref|NP_661210.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium tepidum TLS]
gi|21646222|gb|AAM71552.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium tepidum TLS]
Length = 185
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V + + F D RGWF +++ + ++ FVQDN SFS G +RGLH+Q+P
Sbjct: 7 SIPDVLLFEPEVFGDERGWFCESFRQDIFEQHAGCHRFVQDNESFSRY-GVVRGLHYQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q KLVR I G + D+AVDIR+ SPT+G + ++ +N ++IP GFAHGF L
Sbjct: 66 PHVQGKLVRVIRGEVLDVAVDIRKGSPTFGHHTAQLLNESNRRMMWIPPGFAHGFAVLSQ 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK TD+Y+ HD+G+ W D +I I W + ++ + +S+KD + P L++I+
Sbjct: 126 TAVFSYKCTDYYAPSHDAGIRWNDPAIGIEWSVPESEI-RLSDKDLHHPMLHEIE 179
>gi|110833775|ref|YP_692634.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alcanivorax borkumensis SK2]
gi|110646886|emb|CAL16362.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Alcanivorax borkumensis SK2]
Length = 183
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+++K + F D RG+F +T++++ E G+ FVQDNHS S T+RGLH+Q
Sbjct: 8 IPEVKLIKPKVFGDERGFFMETWNARAFAEAGIDATFVQDNHSRS-VKNTLRGLHYQIKQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVRC G +FD+AVD+R++SPT+G WV +S N Q+++P GFAHGF+ +
Sbjct: 67 -PQGKLVRCTRGEVFDVAVDLRKSSPTFGQWVGEILSEENQNQLWVPPGFAHGFLVMTET 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTI-LPSVSEKDQNLPFLNQID 176
+ YK TDFY+ EHD + W D I I WP P VS+KD L +
Sbjct: 126 ADFQYKCTDFYAPEHDRCIHWADSKIGIDWPFEPEARSPLVSQKDAAGARLLDAE 180
>gi|310817081|ref|YP_003965045.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ketogulonicigenium vulgare
Y25]
gi|308755816|gb|ADO43745.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ketogulonicigenium vulgare
Y25]
Length = 183
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 92/182 (50%), Positives = 123/182 (67%), Gaps = 4/182 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I+ + D+RG+FS++++ + + + GL FVQDNHS S GT+RGLHFQ P
Sbjct: 6 SLPGVMIVTPARHGDARGFFSESWNRQRMADAGLVYDFVQDNHSLSMRVGTLRGLHFQSP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVRC GR+FD+AVDIR+ SPTYG WV +E+S NG Q+ IP GF HGF+TLE
Sbjct: 66 PHAQAKLVRCGRGRLFDVAVDIRKGSPTYGKWVGVELSFENGRQLLIPEGFLHGFVTLEP 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TEV+YK TD+Y+ + D V W S I WPL P +S+KD L+ DSPF++
Sbjct: 126 ETEVVYKCTDYYAPDCDGAVLWD--SCGIEWPLEGE--PLLSDKDLRAVPLSDFDSPFDF 181
Query: 182 DG 183
G
Sbjct: 182 KG 183
>gi|218779339|ref|YP_002430657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfatibacillum
alkenivorans AK-01]
gi|218760723|gb|ACL03189.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfatibacillum
alkenivorans AK-01]
Length = 184
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 70/177 (39%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ F D RG F +TY S GL FVQDN S S +RGLH+Q
Sbjct: 7 SLPGVLIIEPSVFSDHRGLFMETYHSGRFAAHGLDVKFVQDNLSIS-GENVLRGLHYQIT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLV+ + GRIFD+AVD+R+ SPT+G W + + Q++IP GFAHGF L
Sbjct: 66 HVQA-KLVQAVQGRIFDVAVDVRKGSPTFGQWTGAVLDDESHRQMFIPAGFAHGFCVLSK 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
V YK Y+ + + W D + + WPL D P +SEKDQ P L I
Sbjct: 125 EARVCYKCDALYAPGDEGTLLWSDPDVGVEWPLSD---PILSEKDQAGPRLKDIPPN 178
>gi|330989098|gb|EGH87201.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 181
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F ++++++ + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNARAFQAATGLTREFVQDNHSRSQQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W P++S KDQ L + D
Sbjct: 125 EHAEFLYKTTDYYTPSAERCIAWNDPDLAINWQFDG--QPNLSAKDQQGKRLKEAD 178
>gi|237654463|ref|YP_002890777.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thauera sp. MZ1T]
gi|237625710|gb|ACR02400.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thauera sp. MZ1T]
Length = 178
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 100/174 (57%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ + F D RG+F +T+ + +E G+ FVQDNHS S G +RGLHFQ
Sbjct: 8 LPGVLIIEPKAFGDHRGFFLETFQVERYREAGITLPFVQDNHSRSQR-GVLRGLHFQ-KT 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV G ++D+AVDI S TYG +V +E++ +N Q+++P G+AHGF L
Sbjct: 66 RPQGKLVSVSRGAVYDVAVDIDPASATYGKFVGVELNDDNHRQMWVPPGYAHGFCVLSEV 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK TDFY + G+AW D + I WP+ P +S KD N P L +
Sbjct: 126 ADFQYKCTDFYLPADEGGLAWNDPDVGIPWPIE---APQLSAKDMNNPRLRDLK 176
>gi|157161533|ref|YP_001458851.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli HS]
gi|300946366|ref|ZP_07160644.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 116-1]
gi|301643905|ref|ZP_07243934.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 146-1]
gi|157067213|gb|ABV06468.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli HS]
gi|300453958|gb|EFK17578.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 116-1]
gi|301077725|gb|EFK92531.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 146-1]
Length = 184
Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + R F D+RG+F +++SSK+ E G Q FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPEVLIFEPRVFGDARGFFFESFSSKVFNEAVGRQVDFVQDNHSQSQK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+ G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGFM L
Sbjct: 66 APHAQGKLVRCVEGEVFDVAVDIRRSSPTFGKWVGAVLSAENKRQLWIPEGFAHGFMALS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y+ + + + W D I I WP L S+SEKD L +
Sbjct: 126 DTVQFVYKATNYYAPQSERSIIWNDPEIGIDWPALSDCALSLSEKDLQAHTLATAE 181
>gi|189465696|ref|ZP_03014481.1| hypothetical protein BACINT_02057 [Bacteroides intestinalis DSM
17393]
gi|189433960|gb|EDV02945.1| hypothetical protein BACINT_02057 [Bacteroides intestinalis DSM
17393]
Length = 182
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D RG+F + + + K FVQDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFRDERGYFMEAFKEEDFKAHIGDVHFVQDNESKS-SFGVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q+KLVR I G++ D+AVD+RR SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYCQSKLVRVIKGKVLDVAVDLRRTSPTFGKYVSVELSEENQRQFFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D++I I WP+ + L +S KD+ P
Sbjct: 126 EAIFTYKVDNVYAPQAEASIRFNDETIGIDWPVAEEHL-LLSPKDKAAPLFKDA 178
>gi|330998420|ref|ZP_08322244.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paraprevotella xylaniphila
YIT 11841]
gi|329568526|gb|EGG50331.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paraprevotella xylaniphila
YIT 11841]
Length = 190
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F D+RG+F +++S + L FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEGVVIIEPRLFNDARGYFFESFSQRDFDRLVRTVHFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G V++E++ N Q +IP GFAHGF L
Sbjct: 67 YAQSKLVRVIKGAVLDVAVDIRKGSPTFGQHVAVELTEENHRQFFIPRGFAHGFSVLTPE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D + I W + + +SEKD+ P L + F+Y
Sbjct: 127 VIFQYKCDNFYAPQSEGALAWDDPDLGINWHIPSDKI-LLSEKDKRHPRLKDAEWLFDY 184
>gi|237745879|ref|ZP_04576359.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
HOxBLS]
gi|229377230|gb|EEO27321.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
HOxBLS]
Length = 189
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 70/170 (41%), Positives = 96/170 (56%), Gaps = 2/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ + F D RG+F ++Y+ K+ GL VFVQDN S S GTIRG+HFQ
Sbjct: 8 LEGVYIIEPKVFSDPRGYFFESYNQDKFKKAGLDYVFVQDNQSKS-SYGTIRGIHFQTGK 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLV + G + DIAVD+R SPT+G V++E+S N Q+ IP GF HGF L
Sbjct: 67 HAQTKLVWVLQGTVLDIAVDLRVGSPTFGQHVAVELSGENYRQLLIPRGFGHGFSVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
YK +FY + V + D + I W + D +SEKD+ P
Sbjct: 127 AVFSYKCDNFYMPSSEGSVRFDDPDLAIDWRV-DRKRALLSEKDKTAPDF 175
>gi|209526055|ref|ZP_03274588.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arthrospira maxima CS-328]
gi|209493581|gb|EDZ93903.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arthrospira maxima CS-328]
Length = 182
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ + F D RG+F ++++ K+ ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVFLVEPKVFGDDRGFFFESFNQKVFTEKTGVTTDFVQDNHSRSSQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KL+R + G +FD+AVDIR++SPT+G WV +SA N Q++IP GFAHGF+
Sbjct: 66 QQT-QGKLLRVVLGEVFDVAVDIRKSSPTFGQWVGYYLSAENKQQLWIPPGFAHGFLVTS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD+Y+ +++ + W D I I WPL +++ P +SEKD+N L +
Sbjct: 125 PVAEVLYKTTDYYAPQYERSLLWNDPDIAIEWPL-ESLEPKLSEKDKNGNTLTNAE 179
>gi|319789558|ref|YP_004151191.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermovibrio ammonificans
HB-1]
gi|317114060|gb|ADU96550.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermovibrio ammonificans
HB-1]
Length = 187
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 109/182 (59%), Gaps = 6/182 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I + ++++R F+D RG+F + + + G++ FVQDN S S +RGLH+Q
Sbjct: 8 LPIPGLLLVESRLFKDGRGFFMELFKLPDFEAAGIKGPFVQDNLSLS-RKNVLRGLHYQV 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KLV C+ G++FD+AVD+R+ SPT+G W E+ +YIP GFAHGF+TL
Sbjct: 67 EPAAQGKLVTCLRGKVFDVAVDLRKGSPTFGRWFGTELFPGKM--LYIPEGFAHGFLTLS 124
Query: 121 MNTEVIYKVTD-FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V YKVT YS EHD + W D I I WPL P +SEKD+N P L++ + F
Sbjct: 125 EEALVFYKVTGSPYSPEHDRSLKWNDPQIGIEWPLDGE--PILSEKDRNAPSLSEAEINF 182
Query: 180 EY 181
+
Sbjct: 183 RW 184
>gi|325143337|gb|EGC65670.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
961-5945]
Length = 185
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y+ E + + W D ++ I WPL P +S KD Q +
Sbjct: 126 AEFVYKCTDYYNPEAEHSLIWNDPTVGIDWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|46451854|gb|AAS98029.1| RmlC [Shigella boydii]
Length = 177
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 115/173 (66%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T++Y E D G+ W D I+I WP + I +S+KD++ P L+
Sbjct: 126 ETAEFLYKTTNYYHPESDRGIIWDDSFINIQWPYAECI--ILSDKDKHQPRLS 176
>gi|257093452|ref|YP_003167093.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045976|gb|ACV35164.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 180
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 109/177 (61%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ + F D+RG+F +T++ + +LGL FVQDNHS S G +RGLH+Q
Sbjct: 7 DLPDVWIVEPKVFGDARGFFMETWNRRTFADLGLDVEFVQDNHSRS-RQGVLRGLHYQIH 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +G +FD+AVD+RR+SP +G W + +S N +++P GFAHGF+ +
Sbjct: 66 E-PQGKLVRVTSGEVFDVAVDLRRSSPHFGRWAGVTLSGENQRMLWVPPGFAHGFLVVSP 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ +YK T +Y+ EH+ VAW D I I WPL D P++S KD+ L ++
Sbjct: 125 AADFLYKTTAYYAPEHERCVAWNDPDIGIRWPLDDE--PALSAKDRIGTPLRLAEAY 179
>gi|46579112|ref|YP_009920.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603309|ref|YP_967709.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio vulgaris DP4]
gi|46448525|gb|AAS95179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563538|gb|ABM29282.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio vulgaris DP4]
gi|311232955|gb|ADP85809.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio vulgaris RCH1]
Length = 190
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 78/179 (43%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +R+L + D RG+F +TY L FVQDNH+ S D G +RGLHFQ PP
Sbjct: 8 LPGLRLLTPQAHRDERGFFLETYRESFFDTLTHGQRFVQDNHARSEDAGVLRGLHFQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLV + G I+D+AVD+R SPT+G W ++A + +IY+P GFAHG+MTLE
Sbjct: 68 MTQAKLVWAVQGSIYDVAVDLREGSPTFGRWFGCTLTAASFQRIYVPRGFAHGYMTLEPG 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
TEV+YKV +Y+ + G+ W D I ITWP + P +S KDQ +PF +
Sbjct: 128 TEVMYKVDAYYAPALEQGLPWNDPDIGITWP---DMTPILSAKDQRHGTFRDFRTPFSF 183
>gi|134046343|ref|YP_001097828.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanococcus maripaludis C5]
gi|132663968|gb|ABO35614.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanococcus maripaludis C5]
Length = 187
Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 112/181 (61%), Gaps = 4/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ + F D RG+F +TY + G+ + FVQDNHS S G +RGLHFQ
Sbjct: 8 LKIPEVILIEPKVFPDERGFFLETYKFSDFFDAGITENFVQDNHSKSKY-GVLRGLHFQN 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KLVRCI G IFD+AVD+RRNSP YG WV +S N +YIP GFAHGF L
Sbjct: 67 DPKAQGKLVRCIKGEIFDVAVDLRRNSPKYGKWVGEILSEENKKMLYIPNGFAHGFCVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E+IYK T+ Y D+G+ W D++I I WP++D P +SEKD LP L + F
Sbjct: 127 SEAEIIYKCTEEYVPGCDAGILWNDETIGIDWPVVD---PIISEKDSLLPNLVDSNVNFR 183
Query: 181 Y 181
Y
Sbjct: 184 Y 184
>gi|218681703|ref|ZP_03529504.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli CIAT
894]
Length = 192
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ P
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAVAGTVRGLHFQIGP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP++G W+S E+S G+Q++IP GFAHGF+T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIRVGSPSFGKWLSQELSPETGMQLWIPAGFAHGFVTIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YKVT YS +HD G+AW D +I I WP + + S S+KD+ LP L + S F Y
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFDEKDMVS-SDKDKTLPRLADLPSHFSY 185
>gi|9957823|gb|AAG09505.1|AF279616_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 177
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/172 (48%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EVPDVLIFEPKVFSDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCIAG +FD+AVDIR++S T+G WV + IS+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCIAGEVFDVAVDIRKDSETFGKWVGVNISSENKRQLWIPEGFAHGFLVLG 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK ++FY+ + D GVAW D I I WPL++ P +S KD PFL
Sbjct: 126 EEAEFVYKTSNFYNPDSDRGVAWNDPDIGINWPLINN--PLLSNKDSKQPFL 175
>gi|51246075|ref|YP_065959.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Desulfotalea
psychrophila LSv54]
gi|50877112|emb|CAG36952.1| probable dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Desulfotalea
psychrophila LSv54]
Length = 184
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ R F D+RG+F +T+ K EL FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPELVIIEPRVFADARGFFMETWQQKKFDELIGPQTFVQENHSKSSA-GILRGLHYQ-E 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIR++S T+G WV + +SA N Q +IP GFAHGF +
Sbjct: 65 KNTQGKLVRIVIGEVFDVAVDIRKDSNTFGQWVGVLLSAENKRQFWIPKGFAHGFYVISQ 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ +YK TD+Y+ + + + W D + I WPL P +SEKDQ+ +QI
Sbjct: 125 EADFVYKCTDYYNPQAERTILWNDPDLAIDWPLK--TPPQLSEKDQSGMPFSQI 176
>gi|239993213|ref|ZP_04713737.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Alteromonas macleodii
ATCC 27126]
Length = 181
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+I++ + F D RG+F +T+ + K+ FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPKVFGDERGFFLETFRTDWFKKECADVDFVQDNHSKSSQ-GILRGLHYQME 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G ++D+AVD+R++SPTYG WV + +SA N Q+++P GFAHGF
Sbjct: 66 QT-QGKLVRVVSGEVYDVAVDMRKDSPTYGKWVGVTLSAENKRQLWVPAGFAHGFYVTSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ E +YK TD+Y E + V + D +++I WPL++ PS+S KD+ +
Sbjct: 125 SAEFVYKCTDYYHPESEISVKYDDPTLNIDWPLVNGEKPSLSGKDEAGLAFVNAPT 180
>gi|330874358|gb|EGH08507.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 181
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++++ ++ GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPKVFGDERGFFYESFNARAFQQATGLTRQFVQDNHSRSQR-GVLRGLHYQIE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 67 N-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W PS+S KDQ L D
Sbjct: 126 HAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQF--DAEPSLSAKDQQGKSLKDAD 178
>gi|85710316|ref|ZP_01041381.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erythrobacter sp. NAP1]
gi|85689026|gb|EAQ29030.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erythrobacter sp. NAP1]
Length = 181
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ I++ + F D RG+F ++++++ + GL FVQDNHS S G +RG+HFQ P
Sbjct: 7 EIDGPLIIEPKVFGDERGFFMESWNAQAFADAGLDIAFVQDNHSRS-QKGVLRGMHFQNP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G +FD+AVD+RR+SPT+G WV +E+SA N ++P GFAHGF+TLE
Sbjct: 66 G-PQGKLVRVVSGAVFDVAVDLRRSSPTFGKWVGVELSAQNKRMFWVPQGFAHGFLTLED 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
NT+ +YK Y+ + + +AW D + I WP D + +S KD+ L +++
Sbjct: 125 NTDFLYKCDAPYAPQTEHSLAWDDPEVGIQWP-TDGLEVQLSSKDREGKSLGEVE 178
>gi|329118014|ref|ZP_08246727.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465902|gb|EGF12174.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 179
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+IL+ + F D RG+F +T+ K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPEVKILEPQVFGDERGFFMETFRDDWFKAHVCERTFVQENHSQS-GGGVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR +AG +FD+AVD+RRNSPT+G W +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVAGAVFDVAVDLRRNSPTFGQWAGAILSAENKRQLWVPEGFAHGFYVLGGG 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D +I I WPL P +S KD L +
Sbjct: 126 AEFVYKCTDYYNPRAEHTLLWNDPAIGIAWPLHGE--PKLSAKDAAGKTLAEA 176
>gi|260460165|ref|ZP_05808417.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mesorhizobium opportunistum
WSM2075]
gi|259033810|gb|EEW35069.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mesorhizobium opportunistum
WSM2075]
Length = 184
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I+ V + ++ D+RG+F +TY+++ + G+ VFVQDNHS+S G +RGLH+Q
Sbjct: 7 LGIDGVLEIVPKRHGDARGFFVETYNAERFAQAGIDLVFVQDNHSYSAAAGVLRGLHYQL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R I G + D+AVDIRR S T+G WV+LE+SA G QI +P GFAHGF+TL
Sbjct: 67 APRAQDKLLRVIRGSVLDVAVDIRRGSKTFGKWVALEVSAKKGNQILVPKGFAHGFVTLV 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+TEV+YKVTD YS EHD + + D +I I WP +S+KD P L +
Sbjct: 127 PDTEVLYKVTDTYSPEHDRSICFDDPAIGIEWP-SLASGFQLSDKDLKAPLLAAAE 181
>gi|256017789|ref|ZP_05431654.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella sp. D9]
gi|332278810|ref|ZP_08391223.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella sp. D9]
gi|332101162|gb|EGJ04508.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella sp. D9]
Length = 185
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 81/178 (45%), Positives = 113/178 (63%), Gaps = 4/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKIFEEAVGRKVEFVQDNHSKS-RKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAKLVRCI G +FDIAVDIR++SP +G WV + +SA N Q++IP GFAHGF+ +
Sbjct: 66 EPYAQAKLVRCIEGEVFDIAVDIRKSSPFFGKWVGVTLSAENKRQLWIPEGFAHGFVVIS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E +YK ++YS + + + + DK + I WPL +SEKD N P +I S
Sbjct: 126 DTAEFVYKTNNYYSQQAERSIIFDDKDLGIAWPL--NTHYILSEKDLNAPTFKKISSN 181
>gi|39933195|ref|NP_945471.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Rhodopseudomonas palustris
CGA009]
gi|39652820|emb|CAE25562.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Rhodopseudomonas palustris
CGA009]
Length = 185
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 117/178 (65%), Gaps = 1/178 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I+ R F DSRG F +TY+ + + G+ FVQDN S S GT+RGLHFQ P
Sbjct: 9 IEAVKIITPRAFADSRGSFVETYNRQRFVDHGVALEFVQDNQSISAAVGTVRGLHFQSAP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR GRI D+AVD+RR+SPTYG WV+ E+SA +G Q+ IP GFAHGF TLE +
Sbjct: 69 FAQDKLVRVAKGRILDVAVDLRRSSPTYGQWVAEELSAEDGKQLLIPIGFAHGFCTLEPD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
T V YKVT++YS HD G+AW D + + WP+ +S+KD LP + + FE
Sbjct: 129 TVVAYKVTNYYSPPHDLGIAWNDPDLAVRWPVT-ADQAVLSDKDLELPPFASLPNYFE 185
>gi|15890372|ref|NP_356044.1| dTDP-rhamnose-3,5-epimerase [Agrobacterium tumefaciens str. C58]
gi|11385991|gb|AAG35059.1|AF314183_1 dTDP-rhamnose-3,5-epimerase [Agrobacterium tumefaciens]
gi|15158589|gb|AAK88829.1| dTDP-rhamnose-3,5-epimerase [Agrobacterium tumefaciens str. C58]
Length = 189
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ ++ + +F D+RG+FS+ + + +E FVQDN S S GT+RGLHFQ P
Sbjct: 8 ISGLKKIIPARFGDNRGYFSEVFKREWFRENVANVEFVQDNESLSAQAGTVRGLHFQTEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRCI GR+ D+AVDIR SPT+G W ++E+S NG Q+++P GFAHGFMTL +
Sbjct: 68 FAQGKLVRCIRGRLLDVAVDIRTGSPTFGQWAAVELSPENGEQLWVPAGFAHGFMTLVAD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T + YKVT YS HD GV W D +I I WP + +S+KD P L+++ F Y
Sbjct: 128 TVISYKVTAPYSAAHDRGVKWDDPAIGINWP--NVADCVLSDKDAKQPLLSELPEYFTY 184
>gi|172036645|ref|YP_001803146.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. ATCC 51142]
gi|171698099|gb|ACB51080.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. ATCC 51142]
Length = 181
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ R F D RG+F ++Y+ K E G++ FVQDNHS S +RGLH+Q
Sbjct: 7 KIPDVVIIEPRVFGDDRGFFYESYNQKAFTEATGIERNFVQDNHSRSQK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G + D+AVDIR++SPT+G WVS +S N Q ++P GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVVVGEVLDVAVDIRKSSPTFGQWVSCLLSEENKRQFWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ +++ + W D + I W L D P +S+KDQ +
Sbjct: 125 DAAEFLYKTTDYYAPQYERSILWNDPDLAIDWQLKDE--PKLSKKDQEGLPFKAAE 178
>gi|28377962|ref|NP_784854.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus plantarum
WCFS1]
gi|28270796|emb|CAD63701.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus plantarum
WCFS1]
Length = 182
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 1/171 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D RG+F++TYS + KE G+ F+QDN S S + G +RGLHFQR
Sbjct: 10 KLQDVKIIEPAVFGDKRGFFTETYSDRDFKEAGIDFDFIQDNQSLSAEAGVLRGLHFQRG 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G + D+ VD+R SPTYG W IS +N Q+ +P GFAHGF+TL
Sbjct: 70 KAAQTKLIRVVTGAVLDVIVDVRAGSPTYGEWEGYIISESNHRQLLVPRGFAHGFVTLTD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
N +YK ++Y+ E D G+ + DK ++I WP+ D S+KD
Sbjct: 130 NVNFLYKCDNYYNAEADGGITFMDKDLNINWPI-DYDQAITSDKDAKQQTF 179
>gi|332142156|ref|YP_004427894.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Alteromonas macleodii
str. 'Deep ecotype']
gi|327552178|gb|AEA98896.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Alteromonas macleodii
str. 'Deep ecotype']
Length = 181
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+I++ + F D RG+F +T+ + K+ FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPKVFGDERGFFLETFRTDWFKKECADVDFVQDNHSKSSQ-GILRGLHYQIE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G ++D+AVD+R++SPTYG WV + +SA N Q+++P GFAHGF
Sbjct: 66 QT-QGKLVRVVSGEVYDVAVDMRKDSPTYGKWVGVTLSAENKRQLWVPAGFAHGFYVTSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
N E +YK TD+Y E + V + D +++I WPL++ PS+S KD+ +
Sbjct: 125 NAEFVYKCTDYYHPESEISVKYNDSTLNIDWPLVNGEKPSLSGKDEAGLAFVDAPT 180
>gi|192288554|ref|YP_001989159.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
TIE-1]
gi|192282303|gb|ACE98683.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
TIE-1]
Length = 185
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I+ R F DSRG FS+TY+ + + G+ FVQDN S S GT+RGLHFQ P
Sbjct: 9 IEAVKIITPRAFADSRGTFSETYNRQRFVDHGVALEFVQDNQSISAAVGTVRGLHFQSAP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR GRI D+AVD+RR+SPTYG WV+ E+SA +G Q+ IP GFAHGF TLE +
Sbjct: 69 FAQDKLVRVAKGRILDVAVDLRRSSPTYGQWVAEELSAEDGKQLLIPIGFAHGFCTLEPD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
T + YKVT++YS HD G+AW D + + WP+ +S+KD LP + + FE
Sbjct: 129 TVLAYKVTNYYSPPHDLGIAWNDPDLAVRWPVT-ADQAVLSDKDLKLPPFASLPNYFE 185
>gi|285808321|gb|ADC35851.1| dTDP-4-dehydrorhamnose 35-epimerase [uncultured bacterium 92]
Length = 180
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ + +++ + FED RG+F +TY S G+ Q+NHS S GT+RGLH QR
Sbjct: 8 LDLPDIILIEPKVFEDPRGFFMETYKSSDFTAAGITAPLKQENHSRSIR-GTLRGLHAQR 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+ + G IFD+A+DIRR SPT+G W + +S N Q++IP G+AHGF L
Sbjct: 67 APKAQGKLISVLEGEIFDVALDIRRESPTFGRWTTATLSRANRYQLFIPPGYAHGFAVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK T+ Y+ E + GV W D + I WPL P +S +D++ P L +
Sbjct: 127 DVAEVVYKTTEEYAPELEYGVRWDDPELAIPWPLRGE--PILSSRDRSWPRLRDL 179
>gi|301311243|ref|ZP_07217171.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
gi|300830817|gb|EFK61459.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
Length = 193
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 79/180 (43%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ + F+D+RG+F +++S + +E + FVQDN S S G +RGLHFQRP
Sbjct: 7 DIEGVVIIEPKVFDDARGYFFESFSQREFEEKVRKINFVQDNESMS-SYGVMRGLHFQRP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q+KLVRC+ G + D+AVDIR+ SPTYG V++E+S +N Q ++P GFAHGF L
Sbjct: 66 PFTQSKLVRCVKGCVLDVAVDIRKGSPTYGKHVAVELSEDNHRQFFVPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + D G+ +D+S+ I W + +SEKD P L DSPF+Y
Sbjct: 126 IAVFQYKCDNFYAPQADGGICIKDESLGIDWRIP-MDKALLSEKDIKHPCLEDFDSPFDY 184
>gi|158605286|gb|ABW74896.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Sphingomonas sp. ATCC 53159]
Length = 188
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 1/182 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V K+ D RG+FS+ + +L G++ +VQDN SFS GTIRGLH Q P
Sbjct: 8 ELSGVIEFTPPKYGDHRGFFSEVFKQSVLDAEGVEARWVQDNQSFSAAPGTIRGLHLQAP 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVR + G IFD+AVDIRR SPTYG WV +E+SA Q+ +P G+AHGFMTL
Sbjct: 68 PFAQAKLVRVLRGAIFDVAVDIRRGSPTYGKWVGVELSAEKWNQLLVPAGYAHGFMTLVP 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ E++YKV+ YS + + + W D + I WP + P +SEKD + ++PF Y
Sbjct: 128 DCEILYKVSAKYSKDSEMAIRWDDPDLAIAWP-DIGVEPVLSEKDAVATPFAEFNTPFFY 186
Query: 182 DG 183
G
Sbjct: 187 QG 188
>gi|194337317|ref|YP_002019111.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309794|gb|ACF44494.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 206
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I + + F D RG+F +++ L ++ FVQDN S S G +RGLHFQ+PP
Sbjct: 19 IPDVLIFEPKVFGDDRGYFFESFRQDLFEQHVGHVAFVQDNESKSGY-GVLRGLHFQKPP 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR + G + D+AVD+R SP YG VS + +++P GFAHGF+ L
Sbjct: 78 FTQSKLVRALYGSVLDVAVDLRLGSPWYGRHVSCLLDTERKRMLWVPKGFAHGFLVLSQE 137
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK ++Y+ HD+G+ W D S+ + W L ++ VS KD P + +D+ F Y+
Sbjct: 138 AVFAYKCDNYYTPSHDAGIRWNDPSLAVDWQLPPEVI-RVSGKDAEQPAFSSVDT-FAYE 195
>gi|282898610|ref|ZP_06306598.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein
[Cylindrospermopsis raciborskii CS-505]
gi|281196478|gb|EFA71387.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein
[Cylindrospermopsis raciborskii CS-505]
Length = 181
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ + F D RG+F ++++ KL ++ G+ FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVLLIEPQVFGDERGFFYESFNEKLFTEKTGISPHFVQDNHSRSGK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR AG +FDIAVD+R++SPT+ WV + +S+ N Q++IP GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRVAAGEVFDIAVDLRKSSPTFSQWVGVYLSSANKHQLWIPPGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD+Y+ E+D G+ W D + I+WP+ + P VS KD++ Q +
Sbjct: 125 EYADFLYKTTDYYAPEYDRGILWNDPDLAISWPIGNE--PIVSSKDKSGKLFFQAE 178
>gi|308048796|ref|YP_003912362.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ferrimonas balearica DSM
9799]
gi|307630986|gb|ADN75288.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ferrimonas balearica DSM
9799]
Length = 181
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + F D RG+F +T+ ++ + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IADVVIIEPKVFGDDRGFFMETFRTEEFNKHCAVREFVQENHSKSAK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G +FD+AVD+R +SPT+G WV +E+SA N Q+++P GFAHGF +
Sbjct: 67 T-QGKLVRVVSGAVFDVAVDMRESSPTFGQWVGVELSAENKRQLWVPEGFAHGFYVMTDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD Y+ + + W D +++I WP+ PS+S KD
Sbjct: 126 AEFVYKCTDVYNPNAEVSLRWDDPALNIEWPITVEQQPSLSGKDTEGLLFKDAPK 180
>gi|330505516|ref|YP_004382385.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas mendocina NK-01]
gi|328919802|gb|AEB60633.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas mendocina NK-01]
Length = 182
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 4/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++++ E G+ FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPQVFGDERGFFYESFNARRFAEATGVTRDFVQDNHSRSAR-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR AG ++D+AVD+RR+SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 66 QQAQGKLVRVSAGEVYDVAVDVRRSSPNFGKWVGVHLSAENKRQLWVPEGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y+ H+ + W D+ + I WPL + + P +S KDQ L ++
Sbjct: 126 YAEFLYKTTDYYAPAHERCIRWDDQQLAIDWPL-EGLTPQLSAKDQQGLSLTDAET 180
>gi|237748596|ref|ZP_04579076.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
OXCC13]
gi|229379958|gb|EEO30049.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
OXCC13]
Length = 191
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 101/173 (58%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+++ V I++ + F DSRG+F ++Y+ + K+ GL FVQDN S S GTIRG+HFQ+
Sbjct: 7 SLDGVLIIEPKVFADSRGYFFESYNQESFKKAGLDYSFVQDNESKSVH-GTIRGIHFQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKLVR + G + D+ VD+R S T+G V++E+S N Q+ IP GF HGF L
Sbjct: 66 EFSQAKLVRVLEGNVLDVVVDLRMGSHTFGQHVAVELSGENKRQLLIPRGFGHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK +FY + + + D + I W + + +SEKD+ P Q
Sbjct: 126 TAVFSYKCDNFYMPASEGSILFNDPELAIDWQIPPDDI-LLSEKDKKSPGFQQ 177
>gi|296136994|ref|YP_003644236.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thiomonas intermedia K12]
gi|295797116|gb|ADG31906.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thiomonas intermedia K12]
Length = 187
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 10/185 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++Y+ K + GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPKVFGDERGFFFESYNRKTFALDTGLDVEFVQDNHSKSAQ-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G ++D+AVD+RR+SP + WV +E+SA N +++P GF HGF+ L
Sbjct: 66 VKPQGKLVRAVTGTVWDVAVDLRRSSPRFKQWVGVELSAQNQRLLWVPPGFGHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EHD +AW D + I WPL PS++ KD P L Q +
Sbjct: 126 TADFLYKTTDYWYPEHDRNLAWNDPELAIAWPLKGLHLPGGQPSLAAKDAAAPRLAQAE- 184
Query: 178 PFEYD 182
Y+
Sbjct: 185 --VYE 187
>gi|76666636|emb|CAJ31157.1| probable dTDP-4-dehydrorhamnose 3,5-epimerase [uncultured
sulfate-reducing bacterium]
Length = 180
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
V +LK + FED+RG+F +T++SK L ELG+ +VQDNHS S G +RGLH+Q
Sbjct: 2 PGVYLLKPQVFEDNRGFFMETFNSKGLAELGIDRQWVQDNHSRSAR-GVLRGLHYQ-LGR 59
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
QAKLVR GR+FD+AVDIR SP +G W E+S N L ++ P GFAHGF+ L
Sbjct: 60 PQAKLVRATRGRVFDVAVDIRPGSPHFGQWTGAELSEENKLMLFAPEGFAHGFVVLSDVA 119
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK +D+++ + +AW D I I WP+ + P +S KD P L ++
Sbjct: 120 EFQYKCSDYWAPAEERAIAWNDPDIGIEWPV-EGFEPQLSGKDAANPKLAEV 170
>gi|330961714|gb|EGH61974.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 181
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 113/177 (63%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K +E+ G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVIVFEPKTFGDDRGFFFESFNQKAFEEVVGRSVKFVQDNHSRSVK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR AG +FD+AVD+R++SPT+G WV L ++A N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVTAGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ EH+ +AW D +++I WPL D PS+S KDQ +
Sbjct: 124 SESAEFLYKTTDYWAPEHERSLAWNDPTVNIEWPLSD--APSLSVKDQKAVTFEDAE 178
>gi|190891199|ref|YP_001977741.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium etli CIAT 652]
gi|190696478|gb|ACE90563.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli CIAT
652]
Length = 192
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 87/179 (48%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ P
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRGLHFQISP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP+YG W+S E+S G Q++IP GFAHGF T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIRVGSPSYGEWLSQELSPETGKQLWIPAGFAHGFATIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YKVT YS +HD G+AW D +I I WP + + S S+KD+ LP L + S F Y
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFDERDMVS-SDKDKTLPRLADLPSHFSY 185
>gi|146294971|ref|YP_001185395.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella putrefaciens
CN-32]
gi|145566661|gb|ABP77596.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella putrefaciens
CN-32]
gi|319424481|gb|ADV52555.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella putrefaciens 200]
Length = 181
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ + F D RG+F ++++ + + G Q FVQDNHS S G +RGLH+Q
Sbjct: 7 KIADVKIIEPKVFGDERGFFFESFNQQQFEAAIGRQVQFVQDNHSKS-SKGVLRGLHYQG 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQAKLVRC+ G +FD+ VDIR+NS T+G W+ + ++A N Q++IP GFAHGF+TL
Sbjct: 66 SPHAQAKLVRCVVGEVFDVVVDIRKNSSTFGEWLGVSLTAENKRQLWIPQGFAHGFLTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y + + W D ++I WP+ P +S KDQ
Sbjct: 126 DTAECLYKTTDYYHQASEGAIRWDDPQLNIQWPIK---SPLLSLKDQQAQTFLDFK 178
>gi|284051016|ref|ZP_06381226.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arthrospira platensis str.
Paraca]
Length = 182
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ + F D RG+F ++++ K+ ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVFLVEPKVFGDHRGFFFESFNQKVFTEKTGVTTDFVQDNHSRSSQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KL+R + G +FD+AVDIR++SPT+G WV +SA N Q++IP GFAHGF+
Sbjct: 66 QQT-QGKLLRVVLGEVFDVAVDIRKSSPTFGQWVGYYLSAENKQQLWIPPGFAHGFLVTS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD+Y+ +++ + W D I I WPL +++ P +SEKD+N L +
Sbjct: 125 PVAEVLYKTTDYYAPQYERSLLWNDPDIAIQWPL-ESLEPKLSEKDKNAHTLTNAE 179
>gi|259414800|ref|ZP_05738723.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Silicibacter sp. TrichCH4B]
gi|259349251|gb|EEW60998.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Silicibacter sp. TrichCH4B]
Length = 182
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 87/178 (48%), Positives = 115/178 (64%), Gaps = 4/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V+IL +F D RG+FS++++ + ++ G+ FVQDNHS S + GTIRGLHFQ P
Sbjct: 7 KLSGVKILTPARFGDERGFFSESWNRQRMEAHGIDLDFVQDNHSMSAEVGTIRGLHFQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVRC G +FD+AVD+R SPTYG WV +E++A NG Q+ +P GF HGF+T
Sbjct: 67 PHAQDKLVRCGQGALFDVAVDVRVGSPTYGDWVGVELTAENGRQLLVPKGFLHGFITRAP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
TE+IYK TD+Y+ E D V W S I W T P +SEKD L SPF
Sbjct: 127 MTEIIYKCTDYYAPECDGAVRWD--SCGIDWGF--TGQPILSEKDTAAQALADFKSPF 180
>gi|150400816|ref|YP_001324582.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanococcus aeolicus
Nankai-3]
gi|150013519|gb|ABR55970.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanococcus aeolicus
Nankai-3]
Length = 185
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 83/177 (46%), Positives = 115/177 (64%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V ++K + F D RG+F +TY + + G++ FVQDNHS S G +RGLHFQ+
Sbjct: 9 KISEVILIKPKIFGDERGFFLETYEKEDFENAGIKGEFVQDNHSKSCH-GVLRGLHFQKE 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQAK+VRCI G IFD+AVD+R +SPT+G WV + +S N Q+YIP GFAHGF L
Sbjct: 68 PYAQAKIVRCIKGVIFDVAVDLRGSSPTFGQWVGVVLSEYNKHQLYIPRGFAHGFCVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
EV+YKV + Y+ E + GV W D+ I I W + + P +S+KD+ L ++D
Sbjct: 128 EAEVVYKVDNKYAPECECGVIWNDEDIGIDWLIDE---PILSDKDKQWHTLKELDEK 181
>gi|327188681|gb|EGE55884.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli
CNPAF512]
Length = 192
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 87/179 (48%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ P
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRGLHFQIAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP+YG W+S E+S + G Q++IP GFAHGF T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIRVGSPSYGKWLSQELSPDTGKQLWIPAGFAHGFATIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YKVT YS +HD G+AW D +I I WP + + S S+KD+ LP L + S F Y
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFDERDMVS-SDKDKTLPRLADLPSHFSY 185
>gi|325970228|ref|YP_004246419.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta sp. Buddy]
gi|324025466|gb|ADY12225.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta sp. Buddy]
Length = 183
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 78/171 (45%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ R F D RG+F +TY+ + G+ FVQDN S S G +RGLHFQ
Sbjct: 10 DIEGVLIIEPRVFGDERGYFMETYNKADFYKAGITCEFVQDNQSKS-RKGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y QAKLVR G ++D+AVD+R+ SPTYG +V +SA Q +IP GFAHGF+ L
Sbjct: 68 QYPQAKLVRVTKGEVYDVAVDLRKESPTYGKYVGATLSAELKNQFFIPRGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E YK +FY E + G+ W D SI I WP I +SEKD+ L L
Sbjct: 128 EAEFTYKCDEFYHPEDEGGIRWDDPSIGIQWP-EIGIEYCLSEKDKALSTL 177
>gi|325138752|gb|EGC61304.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
ES14902]
gi|325197361|gb|ADY92817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis G2136]
Length = 185
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y+ E + + W D ++ I WPL P++S KD Q +
Sbjct: 126 AEFVYKCTDYYNPEAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKTWAQAEK 178
>gi|325680882|ref|ZP_08160419.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus albus 8]
gi|324107346|gb|EGC01625.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus albus 8]
Length = 183
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/178 (43%), Positives = 100/178 (56%), Gaps = 4/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+ + + D+RG+F +TY K GL FVQDN S S G +RGLHFQ
Sbjct: 10 KIKGVYIIDVKTYGDNRGYFMETYKEADFKAAGLDYNFVQDNQS-SSRKGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ QAKLVR I G +FD+AVD+R+ S TYG WV + +S N Q IP GFAHGF+ +
Sbjct: 68 THPQAKLVRVIKGEVFDVAVDLRKGSETYGQWVGVLLSEENHRQFMIPRGFAHGFVVVSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK D Y E + G+ W D +I I W D +SEKD++ P L + F
Sbjct: 128 YAEFAYKCDDVYHPEDEGGIMWNDPAIGIEW--ADVGEVILSEKDKHHPSLAESKIEF 183
>gi|113475072|ref|YP_721133.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Trichodesmium erythraeum
IMS101]
gi|110166120|gb|ABG50660.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Trichodesmium erythraeum
IMS101]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 112/176 (63%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ + F D RG+F ++++ + ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPEVLLIEPKVFGDERGFFMESFNQRNFSEKTGVNLEFVQDNHSRSSQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KL+R + G IFD+AVDIR+NSP +G WV +SA N Q+++P GFAHGF +
Sbjct: 66 QQ-AQGKLLRVVLGEIFDVAVDIRKNSPNFGKWVGYLLSAENKRQLWVPPGFAHGFFVVS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+V+YK TD+Y+ E++ + W D I I+WP+ + I +S+KD++ L + D
Sbjct: 125 ETADVLYKTTDYYAPEYERSILWNDSEIGISWPI-NGIEVKLSQKDKDGTTLKEAD 179
>gi|330954841|gb|EGH55101.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae Cit 7]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F +++++K + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNAKAFQAATGLTREFVQDNHSRSQR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W PS+S KDQ L + D
Sbjct: 125 EHAEFLYKTTDYYTPSAERCIAWNDADLAIDWQFDG--QPSLSAKDQQGKRLKEAD 178
>gi|331018758|gb|EGH98814.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++++ +E GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPKVFGDERGFFYESFNARAFQEATGLTRQFVQDNHSRSQR-GVLRGLHYQIE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR G++ D+AVDIRR SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 67 N-AQGKLVRVTVGKVLDVAVDIRRTSPNFGRWVGVELSAENARQLWVPEGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W PS+S KDQ L D
Sbjct: 126 HAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQFNGE--PSLSVKDQQGKSLKDAD 178
>gi|313747666|gb|ADR74245.1| RmlC [Escherichia coli]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 5/170 (2%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+++ + F D+RG+F +TY + +E+G+ + FVQDN S S G +RGLHFQ
Sbjct: 10 GCIVIEPKVFRDARGFFVETYQKEKYQEIGITEDFVQDNRSRSAK-GVLRGLHFQ-TNQP 67
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLV +G ++D+AVD+R S T+G + L +SA Q+YIP GFAHGF L + +
Sbjct: 68 QGKLVSVTSGAVYDVAVDLRPESATFGSYFGLVLSAELNNQLYIPPGFAHGFCVLSDSAD 127
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+YK T +Y+ +SG+ W D ++ I WP+ + P +SEKD LP
Sbjct: 128 FLYKCTQYYNPASESGIQWNDPTLKINWPISN---PFISEKDSTLPSFKD 174
>gi|152980058|ref|YP_001353941.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Janthinobacterium sp.
Marseille]
gi|151280135|gb|ABR88545.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Janthinobacterium sp.
Marseille]
Length = 183
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I + +L+ D RG+F ++++ + E+ G FVQDNHS S G +RGLH+Q
Sbjct: 9 KIPDILLLEPNVLGDDRGFFFESFNERRFAEVTGKTVKFVQDNHSRSLR-GVLRGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIR++SPT+G W +SA N Q++IP GFAHGF+
Sbjct: 68 QQ-PQGKLVRVVSGEVFDVAVDIRKSSPTFGQWAGAVLSAENQRQMWIPEGFAHGFVVTS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+++ EH+ +AW D +I I WP+ +P +S KDQ L +
Sbjct: 127 DTAEFLYKTTDYWAPEHERCIAWDDPAIGIDWPI--NGVPILSAKDQQGTRLADAE 180
>gi|308388300|gb|ADO30620.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis alpha710]
Length = 180
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D RG+F +T+ + ++ + FVQ+NHS S G +RGLH+Q
Sbjct: 9 IPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTFVQENHSKSTQ-GVLRGLHYQTEN 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G +FD+AVD+RR+SPT+G WV +SA+N Q+++P GFAHGF L
Sbjct: 68 T-QGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLSADNKRQLWVPEGFAHGFYVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D ++ I WPLL PS+S KD L +
Sbjct: 127 AEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE--PSLSAKDLAGKMLAEA 177
>gi|293115726|ref|ZP_05792782.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Butyrivibrio crossotus DSM
2876]
gi|292808617|gb|EFF67822.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Butyrivibrio crossotus DSM
2876]
Length = 195
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I +++++ R F D RG+F ++Y+ KE G+ VFVQDN S S G +RGLHFQ
Sbjct: 20 EIEGLKVIEPRVFGDERGYFFESYNYNDFKEAGIPQVFVQDNQSASKR-GVLRGLHFQ-K 77
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR I G +FD+AVD+R+ S TYG W + +S +N Q +IP FAHGF+ L
Sbjct: 78 NFPQDKLVRVIRGEVFDVAVDLRKGSKTYGKWFGVVLSEDNKKQFFIPKNFAHGFLVLSD 137
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TDFY + + G+ + D I + WP + + +S+KDQ + +
Sbjct: 138 YAEFAYKCTDFYHPDDEGGLLYNDPDIGVEWPFEEGVELILSDKDQKWSGIKE 190
>gi|325131124|gb|EGC53845.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
OX99.30304]
gi|325137147|gb|EGC59742.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis M0579]
gi|325201266|gb|ADY96720.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M01-240149]
gi|325207125|gb|ADZ02577.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
NZ-05/33]
Length = 179
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D RG+F +T+ + ++ + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTFVQENHSKSTQ-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G +FD+AVD+RR+SPT+G WV +SA+N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLSADNKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D ++ I WPLL PS+S KD L +
Sbjct: 126 AEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE--PSLSAKDLAGKMLAEA 176
>gi|325915780|ref|ZP_08178082.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas vesicatoria ATCC
35937]
gi|325538044|gb|EGD09738.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas vesicatoria ATCC
35937]
Length = 185
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D+RG F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDARGQFFETWNAERFGQHGLPTSFVQSNVSTSAK-GVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIR SP +G W ++ +SA N Q++IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDIRAGSPHFGRWTAVLLSAENRRQVWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ D P +S KD PFL + +
Sbjct: 126 ALFSYLCTDVYVKEADAGVRWDDAAIGIDWPISD---PVLSAKDAAAPFLADVPG----E 178
Query: 183 GLPLLSL 189
LP+ +
Sbjct: 179 RLPVFAA 185
>gi|224535807|ref|ZP_03676346.1| hypothetical protein BACCELL_00671 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522530|gb|EEF91635.1| hypothetical protein BACCELL_00671 [Bacteroides cellulosilyticus
DSM 14838]
Length = 190
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 81/181 (44%), Positives = 111/181 (61%), Gaps = 2/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ R F D RG+F +++S E + FVQDN S S G +RGLHFQ+
Sbjct: 7 EIDGVVIIEPRIFCDERGYFFESFSQLEFDEKVMPINFVQDNESMS-SYGVMRGLHFQKM 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY Q+KLVRC+ G + D+AVDIR+ SPTYG V++E+S +N Q +IP GFAHGF L
Sbjct: 66 PYTQSKLVRCVKGAVLDVAVDIRKGSPTYGQHVAVELSEDNHRQFFIPRGFAHGFSVLTE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + D G+ D S+ I W + T +SEKD P L + DSPF+Y
Sbjct: 126 IAVFQYKCDNFYAPQADGGIQLIDGSLGIDWRIP-TNKVILSEKDLKHPLLAEYDSPFDY 184
Query: 182 D 182
+
Sbjct: 185 N 185
>gi|187880677|gb|ACD37177.1| RmlC [Escherichia coli]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/176 (46%), Positives = 113/176 (64%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFCVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK +FYS + G+ W DKSI+I WP+ + P +S+KD N D
Sbjct: 126 DEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQN---PLLSDKDINGQKFVDAD 178
>gi|313202900|ref|YP_004041557.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Paludibacter propionicigenes
WB4]
gi|312442216|gb|ADQ78572.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paludibacter propionicigenes
WB4]
Length = 190
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ F D RG+F +++S K +E + VFVQDN S S G +RGLH+Q+P
Sbjct: 7 KLEGVCIIEPVVFADERGYFFESFSQKEFEEKVCKTVFVQDNESKSTY-GVLRGLHYQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ+KLVR + G++ D+A+DIRR SPT+G V++E+S N Q ++P GFAHGF+ L
Sbjct: 66 PYAQSKLVRVVKGKVLDVALDIRRGSPTFGQHVAVELSEENKRQFFVPRGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ YK +FY+ +++ +AW D + I W + + +SEKD++ L ++ F+Y
Sbjct: 126 DVIFQYKCDNFYAPKNEGALAWDDADLSIDWKIPSGDV-ILSEKDKHHSSLKEMKLVFDY 184
Query: 182 D 182
Sbjct: 185 K 185
>gi|96669|pir||S23343 hypothetical protein 7.0 - Salmonella choleraesuis
gi|46986|emb|CAA43075.1| rmlC [Salmonella enterica]
Length = 176
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 81/172 (47%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFSDERGFFMESFNQKVFEEAVGRKIEFVQDNHSKS-TKGVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCIAG +FD+AVDIR +S T+G WV + IS+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCIAGEVFDVAVDIRNDSETFGKWVGVNISSENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK +++YS EH+ G+ W D I+ITW + P +S KD+ L
Sbjct: 126 EEAEFVYKTSNYYSGEHERGIIWNDPDINITWGID---SPILSLKDKIHKGL 174
>gi|119503620|ref|ZP_01625703.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [marine gamma
proteobacterium HTCC2080]
gi|119460682|gb|EAW41774.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [marine gamma
proteobacterium HTCC2080]
Length = 183
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/179 (39%), Positives = 110/179 (61%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V ++K + F D RG+F ++++ E G+ FVQDNHS S G +RGLHFQ
Sbjct: 8 LSGVMLIKPKVFGDDRGFFLESWNRCAFAEAGIPSDFVQDNHSRSRQ-GILRGLHFQ-TQ 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR I+G ++D+ VD+R NS T+G W +SA N Q+++P+GFAHGF + +
Sbjct: 66 QPQGKLVRVISGSVYDVTVDLRTNSATFGQWFGCLLSAENKTQLWVPSGFAHGFYVVSES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ +YK TD+Y + + +AW D I+I WPL++ P +S KD + ++I FE+
Sbjct: 126 ADFLYKCTDYYHPQSEVSLAWNDAHINIQWPLVNGENPELSAKDASALSWSEIP-KFEF 183
>gi|154247480|ref|YP_001418438.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthobacter autotrophicus
Py2]
gi|154161565|gb|ABS68781.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthobacter autotrophicus
Py2]
Length = 185
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 84/181 (46%), Positives = 112/181 (61%), Gaps = 1/181 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I + + +F D+RG+FS+ + + ++ F+QDN S S GT+RGLHFQ
Sbjct: 6 LAIPEIVKITPARFGDARGYFSEVFKDEWFRKNVSDSTFIQDNQSLSSTVGTVRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC AG IFD+AVDIR SPT+G WV +E++ NG Q++IP GFAHGF TL
Sbjct: 66 DPFAQGKLVRCTAGAIFDVAVDIRVGSPTFGRWVGVELTPENGDQLWIPPGFAHGFATLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
++ + YKVT YS HD G+ W D I I WPL T +SEKD+ P L + F
Sbjct: 126 PDSVIFYKVTAPYSAAHDRGLLWNDPEIGIDWPLK-TGQAVLSEKDKVQPRLADLPPSFA 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|153826358|ref|ZP_01979025.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae MZO-2]
gi|149739927|gb|EDM54114.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae MZO-2]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK TD+Y+ + + + W D SI+I WP + + +S+KD+ ++
Sbjct: 125 SDEAEFVYKCTDYYNPKAEHSLLWNDPSINIEWPRSEGL--LLSDKDKEGLRFSE 177
>gi|168818217|ref|ZP_02830217.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205344842|gb|EDZ31606.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320086526|emb|CBY96297.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 176
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 81/172 (47%), Positives = 113/172 (65%), Gaps = 5/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFSDERGFFMESFNQKVFEEAVGRKIEFVQDNHSKS-TKGVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCIAG +FD+AVDIR++S T+G WV + IS+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCIAGEVFDVAVDIRKDSETFGKWVGVNISSENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK +++YS EH+ G+ W D I+ITW + P +S KD+ L
Sbjct: 126 EEAEFVYKTSNYYSGEHERGIIWNDPDINITWGID---SPILSLKDKIHKGL 174
>gi|307594677|ref|YP_003900994.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vulcanisaeta distributa DSM
14429]
gi|307549878|gb|ADN49943.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vulcanisaeta distributa DSM
14429]
Length = 188
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 3/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ F D RG+F++ Y G+ FVQ + S S G +RGLH+Q
Sbjct: 9 LEIPDVILVEPVVFPDVRGFFAELYKRTDFLAGGIPYDFVQVSLSKSRR-GVVRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV I GR+ D+AVD+RR SP +G +V +E+SA+N +++P GFAHGF LE
Sbjct: 68 KPMEQGKLVTVIRGRVVDVAVDVRRGSPWFGKYVMVELSADNPRLLWVPPGFAHGFQALE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T +Y T YS +H+ VAW D I I WP+ + + +SEKD P L Q ++ F+
Sbjct: 128 DDTLFLYLQTKEYSPQHERCVAWNDPEIGIPWPIRENV--IISEKDSKCPPLRQAETNFD 185
Query: 181 Y 181
Y
Sbjct: 186 Y 186
>gi|29725992|gb|AAO88924.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
gi|115279712|gb|ABI85328.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK TD+Y+ + + + W D SI+I WP + + +S+KD+ ++
Sbjct: 125 SDEAEFVYKCTDYYNPKAEHSLLWNDPSINIEWPSSEGL--LLSDKDKEGLRFSE 177
>gi|229154885|ref|ZP_04282999.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 4342]
gi|228628443|gb|EEK85156.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 4342]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 119/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFTESYNKKVLETLGVTYSFVQDNVSYSTEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS HDSGV W DK + I WP+ P +S+KD+ LP L + F
Sbjct: 130 VMYKVDEYYSANHDSGVLWNDKDLAIPWPV---TSPILSDKDRILPSLQDCEDSF 181
>gi|168481341|gb|ACA24827.1| RmlC [Escherichia coli]
gi|320198728|gb|EFW73328.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli EC4100B]
Length = 177
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 115/173 (66%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T++Y E D G+ W D I+I WP + I +S+KD++ P L+
Sbjct: 126 ETAEFLYKTTNYYHPESDRGIIWDDSFINIQWPYDECI--ILSDKDKHQPGLS 176
>gi|93115449|gb|ABE98411.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
gi|203285011|gb|ACH97130.1| RmlC [Escherichia coli]
gi|203285023|gb|ACH97141.1| RmlC [Escherichia coli]
Length = 180
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ + +E+ G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQRQFEEIVGRKISFVQDNHSKS-KKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRCI G ++D+AVD+R S YG WV + +SA N Q++IP GFAHGF+ +
Sbjct: 66 PPFAQGKLVRCINGEVYDVAVDLRPESINYGKWVGIILSAENKKQLWIPEGFAHGFLVIS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E YK T++YS E + G+ W D +I+I WP +S KD PF+
Sbjct: 126 EFAEFAYKTTNYYSKESERGIRWNDPTINIQWP--KMGQYLLSPKDALAPFIE 176
>gi|119513382|ref|ZP_01632415.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like protein [Nodularia
spumigena CCY9414]
gi|119461961|gb|EAW42965.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like protein [Nodularia
spumigena CCY9414]
Length = 212
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V +++ + F DSRG+F ++Y+ + +LG+ FVQDNHS S +RGLH+Q
Sbjct: 38 EISEVYLIEPQVFTDSRGFFLESYNQQKFTDKLGITVNFVQDNHSASQQ-NVLRGLHYQI 96
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G+IFD+AVDIR++SPT+G WV E+SA N Q++IP GFAHGF+ L
Sbjct: 97 IQ-PQGKLVRAVVGKIFDVAVDIRKSSPTFGQWVGYELSAENKRQLWIPPGFAHGFLVLS 155
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EV YK TD+Y+ + D + W D + I WP+ P +S+KD +
Sbjct: 156 EVAEVTYKTTDYYAAQGDRTILWNDPDLAINWPIK--QPPILSDKDNKGQPFKTAE---V 210
Query: 181 YD 182
Y+
Sbjct: 211 YE 212
>gi|332702170|ref|ZP_08422258.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio africanus str.
Walvis Bay]
gi|332552319|gb|EGJ49363.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio africanus str.
Walvis Bay]
Length = 177
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V ++K F D+RG+F +T+ + + G+ FVQDN S S G +RGLHFQ
Sbjct: 8 IAGVLLIKPHVFGDNRGFFLETFQQERYRSAGIALPFVQDNRSRSRK-GILRGLHFQ-RQ 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLV GR+FD+AVDIR SPT+G W + Q+++P G AHGF L
Sbjct: 66 HPQGKLVSVARGRVFDVAVDIRPESPTFGQWFGAVLDDEKHHQLWVPPGLAHGFCVLSDV 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ +YK TDFY E + V W D I I WP + P +SEKD P L +
Sbjct: 126 ADFVYKCTDFYYSEDEGSVRWDDPEIGIGWPFEE---PILSEKDAKAPLLRDL 175
>gi|86160705|ref|YP_467490.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777216|gb|ABC84053.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 188
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/182 (37%), Positives = 104/182 (57%), Gaps = 7/182 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + +++ R F D+RG+F ++++ + +G FVQDNHS S +RGLH+Q
Sbjct: 8 LPGLLVVEPRVFGDARGFFFESFNQRAFDAAVGRHVEFVQDNHSLSTR-NVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLVR G +FD+AVD+RR SPT+G W +SA + Q++IP GFAHGF+ L
Sbjct: 66 PNPQGKLVRVTRGEVFDVAVDLRRGSPTFGRWAGETLSAEDKRQLWIPEGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E +YK+TD++ EH+ + W D ++ I WP P VS KD + +
Sbjct: 126 EAEFVYKITDYWHPEHEHCIRWDDPALGIDWP-TGGAPPIVSAKDAGGRSFREAA---VF 181
Query: 182 DG 183
+G
Sbjct: 182 EG 183
>gi|47568422|ref|ZP_00239123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus G9241]
gi|206977669|ref|ZP_03238561.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus H3081.97]
gi|217958796|ref|YP_002337344.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH187]
gi|222094943|ref|YP_002529003.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Q1]
gi|228984390|ref|ZP_04144569.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229138008|ref|ZP_04266606.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-ST26]
gi|229195516|ref|ZP_04322284.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus m1293]
gi|47554970|gb|EAL13320.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus G9241]
gi|206744097|gb|EDZ55512.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus H3081.97]
gi|217065626|gb|ACJ79876.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH187]
gi|221239001|gb|ACM11711.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Q1]
gi|228588056|gb|EEK46106.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus m1293]
gi|228645353|gb|EEL01587.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-ST26]
gi|228775359|gb|EEM23746.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 181
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFTESYNKKVLETLGVTYSFVQDNVSYSTEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSANHDSGVLWNDKDLAIPWPV---TSPILSDKDRILPSLQECEDSF 181
>gi|326318817|ref|YP_004236489.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375653|gb|ADX47922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 181
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +L+ + F D+RG+F ++++ + E G + FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVVVLEPKVFGDARGFFFESFNQRAFDEATGSRHAFVQDNHSRSAR-GVLRGLHYQIR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+RR+SPT+G WV E+S N Q+++P GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVVRGTVFDVAVDLRRSSPTFGQWVGEELSEENQRQMWVPPGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ EH+ +AW D I I W PS+S KD L + +
Sbjct: 126 SADFLYKTTDYYAPEHERCIAWNDPGIGIDWRFAGE--PSLSAKDAKGTSLREAE 178
>gi|220935510|ref|YP_002514409.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996820|gb|ACL73422.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thioalkalivibrio sp.
HL-EbGR7]
Length = 189
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ R F D RG+F +TY + E G+ FVQDN S S G +RGLH Q P
Sbjct: 8 LPGVLLIEPRVFGDERGFFMETYQASRYAEAGIAGPFVQDNLSLS-RHGILRGLHLQHPG 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLV + G +FD+AVD+R +SPT+G WV +S N Q+++P GFAHGF
Sbjct: 67 -AQGKLVSVLKGEVFDVAVDVRTDSPTFGQWVGEYLSETNKRQLWVPEGFAHGFCVTSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK T YS + + + W D +I I WP+ P++S+KDQ FL I
Sbjct: 126 ALFAYKCTRLYSPQTEISIRWDDPAIGIQWPVD---APALSQKDQAGLFLADI 175
>gi|86748688|ref|YP_485184.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
HaA2]
gi|86571716|gb|ABD06273.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
HaA2]
Length = 185
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 93/178 (52%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I+ + F DSRG F +TY+ + E G+ FVQDN S S GTIRGLHFQ P
Sbjct: 9 IEAVKIIVPKGFADSRGVFCETYNHRRFVEYGVSFDFVQDNQSSSARAGTIRGLHFQSHP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR + GRI D+AVD+RR SPTYG WV+ E+SA+NG Q+ +P GFAHGF TLE
Sbjct: 69 AAQDKLVRVLRGRILDVAVDLRRTSPTYGRWVAEELSADNGKQLLVPVGFAHGFCTLEPE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
T V+YKVT +Y+ HD GVAW D + I WP+ +SEKD LP + + FE
Sbjct: 129 TLVLYKVTGYYAPAHDLGVAWNDPDLAIDWPVS-ADQAVLSEKDMQLPSFRSLPAYFE 185
>gi|332297029|ref|YP_004438951.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema brennaborense DSM
12168]
gi|332180132|gb|AEE15820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema brennaborense DSM
12168]
Length = 193
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/184 (40%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I+ + ++ + F DSRG+F +TYS K GL FVQDN S S G +RGLHFQ
Sbjct: 9 SISGLYEIQPKLFGDSRGYFLETYSEKDFFAAGLTMRFVQDNQS-SSSKGVLRGLHFQ-K 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR ++G ++D+AVD+R SPT+G + + +SA Q YIP GFAHGF L
Sbjct: 67 RFPQGKLVRALSGEVYDVAVDLRVGSPTFGQYHGVVLSAEKQNQFYIPAGFAHGFFVLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFE 180
YK TDFY E + G+ W D + I W L P +S KD P + + F+
Sbjct: 127 TAVFAYKCTDFYHPEDEGGIPWNDPAFGIDWRALAPGTEPILSAKDTAHPAFDPAAAYFD 186
Query: 181 YDGL 184
+G+
Sbjct: 187 ENGV 190
>gi|34863497|gb|AAQ82927.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Raoultella terrigena]
Length = 184
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 81/176 (46%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + R F D+RG+F +++SSK+ E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPEVLICEPRVFGDARGFFFESFSSKIFDEAVGRKVEFVQDNHSQSQK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+ G +FD+AVD+RR+SPT+G WV + +SA N Q++IP GFAHGFM L
Sbjct: 66 APHAQGKLVRCVEGEVFDVAVDVRRSSPTFGQWVGVVLSAENKRQLWIPEGFAHGFMALS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y+ + + + W D I I WP L S+SEKD L +
Sbjct: 126 ETVQFVYKATNYYAPQSERSILWNDPQIGIEWPELSGCALSLSEKDMQAHTLATAE 181
>gi|320162336|ref|YP_004175561.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaerolinea thermophila
UNI-1]
gi|319996190|dbj|BAJ64961.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaerolinea thermophila
UNI-1]
Length = 182
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 79/176 (44%), Positives = 111/176 (63%), Gaps = 2/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V IL+ + F D+RG+F +T+ + LGL FVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVMILEPQVFRDARGFFMETFHEEKFAALGLPTRFVQDNHSASRR-GVLRGLHYQIQQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR I+G +FD+AVD+RR+SPT+G WV +SA N ++IP GFAHGF+ L
Sbjct: 67 -AQGKLVRVISGEVFDVAVDLRRSSPTFGQWVGEVLSAENHRMMWIPAGFAHGFLVLSDW 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
EV+YK TDFY+ + + + W D ++ + W + P +SEKDQ L+Q ++
Sbjct: 126 AEVLYKTTDFYAPQWERTLLWNDPAVGVRWLISPGEQPLLSEKDQRGLPLSQCETY 181
>gi|91211322|ref|YP_541308.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli UTI89]
gi|300986909|ref|ZP_07177887.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 45-1]
gi|91072896|gb|ABE07777.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) (dTDP-L-rhamnose synthetase) [Escherichia
coli UTI89]
gi|288816226|gb|ADC54948.1| RmlC [Escherichia coli]
gi|294493064|gb|ADE91820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli IHE3034]
gi|300407838|gb|EFJ91376.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 45-1]
gi|307626418|gb|ADN70722.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli
UM146]
gi|315295252|gb|EFU54587.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 153-1]
Length = 185
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 81/178 (45%), Positives = 113/178 (63%), Gaps = 4/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++Y+ ++ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESYNQRVFEEAVGRKVEFVQDNHSKS-RKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAKLVRCI G +FDIAVDIR++SP +G WV + +SA N Q++IP GFAHGF+ +
Sbjct: 66 EPYAQAKLVRCIEGEVFDIAVDIRKSSPFFGKWVGVTLSAENKRQLWIPEGFAHGFVVIS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E +YK ++YS + + + + DK + I WPL +SEKD N P +I S
Sbjct: 126 DTAEFVYKTNNYYSQQAERSIIFDDKDLGIAWPL--NTHYILSEKDLNAPTFKKISSN 181
>gi|300114908|ref|YP_003761483.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus watsonii C-113]
gi|299540845|gb|ADJ29162.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus watsonii C-113]
Length = 181
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ R F D RG+F ++Y+ +Q FVQDNHS+S +RGLH+Q
Sbjct: 8 LPGVLLIEPRVFGDERGFFFESYNRVAFAAATDIQAEFVQDNHSYSAKH-VLRGLHYQIH 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR IAG +FD+AVD+RR+SP +G WV +SA N Q++IP GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVIAGEVFDVAVDLRRHSPGFGRWVGYRLSAENRRQLWIPGGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T +Y+ E++ + W D + I WPL + +P +S KDQ + +
Sbjct: 126 YAEFLYKTTAYYAPEYERCIRWDDPDLAIDWPLEE--VPLISAKDQAGCAFKEAE 178
>gi|121633943|ref|YP_974188.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis FAM18]
gi|120865649|emb|CAM09369.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis FAM18]
Length = 190
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y+ E + + W D ++ I WPL P++S KD Q +
Sbjct: 131 AEFVYKCTDYYNPEAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKTWAQAEK 183
>gi|218674078|ref|ZP_03523747.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli GR56]
Length = 192
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 87/179 (48%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ PP
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRGLHFQIPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP++G W+S E+S + G Q++IP GFAHGF T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIRVGSPSFGKWLSQELSPDTGKQLWIPPGFAHGFATIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YKVT YS +HD G+AW D +I I WP +T + S S+KD+ LP L + + F Y
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFDETDMVS-SDKDKTLPRLADLPNHFSY 185
>gi|229095802|ref|ZP_04226781.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-29]
gi|229114753|ref|ZP_04244167.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock1-3]
gi|228668818|gb|EEL24246.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock1-3]
gi|228687635|gb|EEL41534.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-29]
Length = 181
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFTESYNKKVLETLGVTYSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+RR+SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRRDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGVLWNDKELAIPWPV---TSPILSDKDRILPLLQECEDSF 181
>gi|33591366|ref|NP_879010.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella pertussis Tohama
I]
gi|33594889|ref|NP_882532.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella parapertussis
12822]
gi|33599164|ref|NP_886724.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella bronchiseptica
RB50]
gi|33564965|emb|CAE39912.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella parapertussis]
gi|33571008|emb|CAE40487.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella pertussis Tohama
I]
gi|33575210|emb|CAE30673.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella bronchiseptica
RB50]
gi|332380767|gb|AEE65614.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bordetella pertussis CS]
Length = 182
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/179 (43%), Positives = 111/179 (62%), Gaps = 4/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D RG F ++++ L +LG + FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIADVVLIEPQVFGDERGCFFESFNQDRLDAQLGRRIRFVQDNHSCSRA-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ QAKLVR +AG +D+AVD+RR SPT+G W +SA N Q++IP GFAHGF+ L
Sbjct: 65 I-LHPQAKLVRVVAGEAYDVAVDLRRGSPTFGRWTGAYLSARNRHQLWIPEGFAHGFLAL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+TE +YK TD+Y+ EH+ V W D + + WPL P +S KD+ L + D+
Sbjct: 124 SDDTECLYKATDYYAPEHERCVRWDDPQLKVDWPLQ-GQAPILSVKDRQGVALARADTY 181
>gi|269102102|ref|ZP_06154799.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268162000|gb|EEZ40496.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 181
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/176 (44%), Positives = 109/176 (61%), Gaps = 6/176 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQKKFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR+NSPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKNSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TDFY+ + + + W D I I WPL + P +S+KD L +I
Sbjct: 125 SDEAEFVYKCTDFYNPKAEHSILWNDLDIGIEWPLDN--APVLSDKDSKGTLLTKI 178
>gi|254788158|ref|YP_003075587.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Teredinibacter turnerae
T7901]
gi|237683821|gb|ACR11085.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Teredinibacter turnerae
T7901]
Length = 182
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F D RG+F +T+ + E + FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVVIIEPRVFGDERGFFMETFRADAFAEHCTERPFVQDNHSASRQ-GILRGLHYQMEQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G++FD+AVD+R++S T+G WV +E+SA+N Q+++P GFAHGF +
Sbjct: 67 T-QGKLVRVVSGKVFDVAVDLRQSSATFGQWVGVELSADNKRQLWVPEGFAHGFYVMSEF 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y + + + W D ++ + WPL++ P++S KD + D
Sbjct: 126 AEFVYKCTDYYHPQSERSLRWDDPTVGVEWPLVNGEAPALSAKDADGALWANTD 179
>gi|325981019|ref|YP_004293421.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosomonas sp. AL212]
gi|325530538|gb|ADZ25259.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosomonas sp. AL212]
Length = 181
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 107/177 (60%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D RG+F ++++ + + +G FVQ NHS S +RGLH+Q
Sbjct: 6 LAIPDVLLIEPKVFGDERGFFYESFNQRSFESVIGRSVQFVQSNHSRSAR-NVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KL R +AG +FDIAVDIRR+SPT+G WV ++A N Q++IP GFAHGF+ L
Sbjct: 65 IKQ-AQGKLARVVAGEVFDIAVDIRRSSPTFGKWVGGILNAENKNQLWIPPGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +Y TD+++ EH+ + W D + I WP++ + P +S+KD + +
Sbjct: 124 SDYAEFLYNTTDYWAPEHERCIVWNDPMLAIDWPIIGS--PVLSDKDACGTTFEKAE 178
>gi|159042035|ref|YP_001541287.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caldivirga maquilingensis
IC-167]
gi|157920870|gb|ABW02297.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caldivirga maquilingensis
IC-167]
Length = 188
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 3/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ ++F D RG+F++ + G+ F Q + S S G +RGLH+Q
Sbjct: 9 LEIPDVILIEYQRFPDHRGFFAELWKRTDFLANGVFYDFTQLSTSVSRR-GVVRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV + GR+ D+AVD+R+ SP +G V++E+S N +++P GFAHGF LE
Sbjct: 68 KPMEQGKLVTVLRGRVIDVAVDVRKGSPWFGKHVAVELSTNEPRLLWVPPGFAHGFQALE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T +Y +T YS +H+ V W D + I WP+ + +SEKD P L ++ F
Sbjct: 128 DDTVFLYLMTKEYSPQHERCVKWDDPELGIEWPIRSNV--IISEKDSKCPPLKAAETNFN 185
Query: 181 Y 181
Y
Sbjct: 186 Y 186
>gi|170724101|ref|YP_001751789.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida W619]
gi|169762104|gb|ACA75420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida W619]
Length = 180
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + F DSRG+F ++++++ L G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVLIIEPKLFGDSRGFFFESFNAREFARLTGFDAHFVQDNHSRSQR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G + D+AVDIRR+SPT+G WV+ + A + Q +IP GFAHGF+ L
Sbjct: 66 DN-PQGKLVRVVQGEVLDVAVDIRRSSPTFGRWVATRLCAEDHRQFWIPPGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD+Y+ + + W D + I W + P +S KDQ L D
Sbjct: 125 ESADFLYKTTDYYNPAAERCIRWDDPQLAIDWGVE---APLLSAKDQAGALLADAD 177
>gi|229160276|ref|ZP_04288275.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus R309803]
gi|228623237|gb|EEK80064.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus R309803]
Length = 181
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V++L+ R FED RG+F+++Y+ K+L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DVKLLEPRLFEDERGFFTESYNKKVLETLGIAYSFVQDNVSYSTRAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N ++ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFRQWKGYILSADNHRELLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ + P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKELAIPWPVTN---PILSDKDQVLPLLQEYEDSF 181
>gi|220919523|ref|YP_002494827.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957377|gb|ACL67761.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 188
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/182 (39%), Positives = 104/182 (57%), Gaps = 7/182 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + +++ R F D+RG+F ++++ K G FVQDNHS S G +RGLH+Q
Sbjct: 8 LPGLLVVEPRVFGDARGYFFESFNQKAFDAAVGRHVEFVQDNHSLSAR-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLVR G +FD+AVD+RR SPT+G W +SA N Q++IP GFAHGF+
Sbjct: 66 PNPQGKLVRVTRGEVFDVAVDLRRGSPTFGRWAGEILSAENKRQLWIPEGFAHGFLVRSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E +YK+TD++ EH+ + W D ++ I WP + P VS KD + +
Sbjct: 126 EAEFVYKITDYWHPEHEHCIRWDDPALGIDWP-TGGVRPLVSAKDAAGRPFREAA---VF 181
Query: 182 DG 183
+G
Sbjct: 182 EG 183
>gi|125654612|ref|YP_001033806.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Rhodobacter
sphaeroides 2.4.1]
gi|77386272|gb|ABA81701.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Rhodobacter
sphaeroides 2.4.1]
Length = 187
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 80/181 (44%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL R F D+RG F + ++ L+ LG+ FVQDN S S GT+RGLH+Q P
Sbjct: 7 ELPGVLILTPRVFGDARGSFCEAWNRATLQGLGIDLDFVQDNQSISAPVGTVRGLHYQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR G I D+AVD+R SPTYG WV +E++A N Q+ +P GF HGF+T E
Sbjct: 67 PHAQDKLVRVGHGAILDVAVDVRVGSPTYGRWVGVELTAGNARQLLVPKGFLHGFVTREP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T V+YK TD Y+ + D V + D + I W + D +S+KD P SPF
Sbjct: 127 DTVVLYKTTDVYAPDCDGAVHFADPDLGIDWGI-DPASAVLSDKDARAPRFADWTSPFSI 185
Query: 182 D 182
+
Sbjct: 186 E 186
>gi|126464817|ref|YP_001041793.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides ATCC
17029]
gi|221634575|ref|YP_002523263.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides
KD131]
gi|126106632|gb|ABN79157.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides ATCC
17029]
gi|221163448|gb|ACM04410.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides
KD131]
Length = 187
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 80/181 (44%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL R F D+RG F + ++ L+ LG+ FVQDN S S GT+RGLH+Q P
Sbjct: 7 ELPGVLILTPRVFGDARGSFCEAWNRATLQGLGIDLDFVQDNQSISAPVGTVRGLHYQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR G I D+AVD+R SPTYG WV +E++A N Q+ +P GF HGF+T E
Sbjct: 67 PHAQDKLVRVGHGAILDVAVDVRVGSPTYGRWVGVELTAGNARQLLVPKGFLHGFVTREP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T V+YK TD Y+ + D V + D + I W + D +S+KD P SPF
Sbjct: 127 DTVVLYKTTDVYAPDCDGAVHFADPDLGIDWGI-DPASAVLSDKDARAPRFADWTSPFSI 185
Query: 182 D 182
+
Sbjct: 186 E 186
>gi|32456001|ref|NP_862003.1| rb128 [Ruegeria sp. PR1b]
gi|22726353|gb|AAN05149.1| RB128 [Ruegeria sp. PR1b]
Length = 184
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 93/181 (51%), Positives = 121/181 (66%), Gaps = 4/181 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+IL ++F D+RG+FS++++ + + GL FVQDNHS S + GTIRGLHFQ PP
Sbjct: 8 LPGVKILTPQRFGDARGFFSESWNRQRMAAAGLDLDFVQDNHSMSAEVGTIRGLHFQAPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC G +FD+AVDIR+ SPTYG WV +E+SA NG QI +P GF HGF+T
Sbjct: 68 HAQDKLVRCGQGALFDVAVDIRKGSPTYGEWVGVELSAENGKQILVPKGFLHGFITRAPM 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
TEVIYK TD+Y+ + D GV W S I W T P +S KD P L ++DSPF +
Sbjct: 128 TEVIYKCTDYYAPDCDGGVRWD--SCGIDWGFDGT--PVLSGKDAVAPILAELDSPFTWK 183
Query: 183 G 183
Sbjct: 184 E 184
>gi|325133154|gb|EGC55825.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis M6190]
gi|325138770|gb|EGC61322.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
ES14902]
gi|325143303|gb|EGC65639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
961-5945]
gi|325197380|gb|ADY92836.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis G2136]
Length = 179
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ E + + W D ++ I WPL P++S KD L +
Sbjct: 126 AEFVYKCTDYYNPEAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|298370183|ref|ZP_06981499.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria sp. oral taxon 014
str. F0314]
gi|298281643|gb|EFI23132.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria sp. oral taxon 014
str. F0314]
Length = 179
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPEVKLLEPQVFGDARGFFMETFRDEWFKANVCDRTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G W +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKSSPTFGKWAGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D S+ I WPL P++S KD L +
Sbjct: 126 AEFVYKCTDYYNPKAEHSLIWNDPSVGINWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|229078512|ref|ZP_04211072.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock4-2]
gi|228704828|gb|EEL57254.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock4-2]
Length = 181
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DVKLLEPRLFGDERGFFSESYNKQVLETLGITYSFVQDNVSYSAKAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ D P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKDLAIPWPVTD---PILSDKDQILPLLEEYEDSF 181
>gi|309274612|gb|ADO64236.1| RmlC [Vibrio vulnificus]
Length = 181
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
NI V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 NIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV +SA N Q++IP GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGQWVGEYLSAENKRQLWIPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + + W D+++ I WPL + +P +S KD + +
Sbjct: 125 SNEAEFVYKCTDYYNPDSEVSIKWDDETLKIQWPLAN--MPILSNKDLAAQNFLESE 179
>gi|307320269|ref|ZP_07599688.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti AK83]
gi|306894148|gb|EFN24915.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti AK83]
Length = 194
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V + + ED RG+FS+T++ + L E G+ FVQDNHSFS G +RGLH Q
Sbjct: 9 LGLDGVLEILPGRIEDERGFFSETWNERKLAEAGIALHFVQDNHSFSAAKGVLRGLHHQL 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVR I G IFD+AVDIRR SPT+ WV+ E+SA QI IP GF+HGF+TLE
Sbjct: 69 SPYAQDKLVRVIRGAIFDVAVDIRRGSPTFAQWVAAEVSARKWNQILIPKGFSHGFLTLE 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NTEVIYKVT+ YS +D + + D I I WPL +S KD P L Q + F
Sbjct: 129 PNTEVIYKVTNPYSPAYDRSIRFDDPEIAIAWPLP-VAEFQLSGKDAAAPPLGQAE-LFN 186
Query: 181 Y 181
+
Sbjct: 187 F 187
>gi|229587853|ref|YP_002869972.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens
SBW25]
gi|229359719|emb|CAY46567.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens
SBW25]
Length = 181
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V I++ + F D RG+F ++Y+++ + G FVQDNHS S G +RGLH+Q
Sbjct: 7 ELPGVLIIEPKVFGDERGFFYESYNARNFAQATGQHVDFVQDNHSRS-QKGVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQ KLVR AG + D+AVDIRR+SP +G W S+ +SA N Q++IP GFAHGF+ L
Sbjct: 66 -EHAQGKLVRVTAGEVLDVAVDIRRSSPHFGKWASVRLSAENSRQLWIPPGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + + W D +DI W T P++S KDQN L + D
Sbjct: 125 DSAEFLYKTTDYYTPSAERCIRWDDADLDIDWQFAGT--PTLSGKDQNGKSLKEAD 178
>gi|60681053|ref|YP_211197.1| putative dTDP-4-dehydrorhamnose 3,5 epimerase [Bacteroides fragilis
NCTC 9343]
gi|60492487|emb|CAH07257.1| putative dTDP-4-dehydrorhamnose 3,5 epimerase [Bacteroides fragilis
NCTC 9343]
Length = 191
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/180 (40%), Positives = 107/180 (59%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + I++ R F D RG+F ++++ + E + +FVQDN S S G IRGLHFQ+P
Sbjct: 7 DIKGLVIIEPRLFRDERGYFFESFNQNVFIEKVCKTMFVQDNESKSSY-GVIRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + G + D+AVDIR+ SPT+G VS+E++ +N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVVKGSVLDVAVDIRKGSPTFGKHVSVELTEDNHRQFFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D + I W + +SEKD L F+Y
Sbjct: 126 EVVFQYKCDNFYAPQCEGAIAWNDPDLGIDWKIP-MEEVILSEKDSCHSALKDAAWLFDY 184
>gi|333030494|ref|ZP_08458555.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides coprosuis DSM
18011]
gi|332741091|gb|EGJ71573.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides coprosuis DSM
18011]
Length = 184
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 106/173 (61%), Gaps = 2/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + I++ + F+D RG+F ++Y+ K E + F+QDN S S G +RGLHFQR
Sbjct: 8 LQGLYIIEPKVFKDQRGYFFESYNKKEFDEKVGRVEFIQDNESKSIY-GVVRGLHFQRGE 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+QAKLVR + G++ D+ VD+R++SP++G ++E+SA N Q+++P GFAHGF L
Sbjct: 67 YSQAKLVRVVQGKVLDVCVDLRKSSPSFGQIFTVELSAENHRQLFVPRGFAHGFSVLSEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK + Y+ E + +AW D + I W + + +SEKD++ L +I
Sbjct: 127 VIFQYKCDNLYAPESEGAIAWNDPKLGIDWGIPANDI-ILSEKDKHHKPLAEI 178
>gi|118580534|ref|YP_901784.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter propionicus DSM
2379]
gi|118503244|gb|ABK99726.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter propionicus DSM
2379]
Length = 181
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + F D RG+F ++++ ++ +EL GL FVQ NHS S G +RGLH+Q
Sbjct: 7 SIPDVLIVEPKVFGDERGFFFESFNQRIWRELTGLDGCFVQHNHSRSTA-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIRR+S T+G W +SA+N Q+++P GFAHGF
Sbjct: 66 HN-PQGKLVRVVSGEVFDVAVDIRRSSATFGRWFGAALSADNKRQLWVPPGFAHGFYVTS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +Y TDF++ EH+ +AW D + I WPL PS+S+KD+ P + +
Sbjct: 125 PVAEFLYLTTDFWAPEHERCIAWNDPDLAIQWPLAGE--PSLSDKDRAAPPFRKAE 178
>gi|329569822|gb|EGG51581.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecalis TX1467]
Length = 175
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 74/172 (43%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 12 RKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRC 71
F + RG+F+++YS E GL FVQDNHS S + G +RGLHFQ+ AQ KL+R
Sbjct: 2 DVFGNHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRGLHFQKGEAAQTKLIRV 61
Query: 72 IAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTD 131
+ G + D+ VDIR+ SPTYG W +S +N Q+ +P GFAHGF+TL N +YK +
Sbjct: 62 VTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHGFVTLTPNVNFMYKCDN 121
Query: 132 FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPFEY 181
+Y+ D G+A+ D ++ I WP+ SEKDQ P L + ++PF Y
Sbjct: 122 YYNAAADGGIAFNDPALAIDWPIAPEKA-ITSEKDQKHPTLKEFEAENPFIY 172
>gi|299133409|ref|ZP_07026604.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Afipia sp. 1NLS2]
gi|298593546|gb|EFI53746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Afipia sp. 1NLS2]
Length = 180
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 78/173 (45%), Positives = 114/173 (65%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V +++ + F D+RG+F ++++ + +E FVQDN SFS G +RGLH+Q P
Sbjct: 8 LDGVMLIEPQVFHDTRGYFFESFNHQRFRESVADVPFVQDNQSFSKK-GVVRGLHYQIAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR +AG IFD+AVDIRRNSP +G W + +SA+N Q+++P GFAHGF L
Sbjct: 67 KAQGKLVRVLAGEIFDVAVDIRRNSPQFGQWTGINLSADNKKQLWVPAGFAHGFQVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TD++S EH+ + W D ++ I WPL + P VS+KD + P L+
Sbjct: 127 AEVLYKTTDYWSAEHERAIRWNDPTLAIDWPLK--MNPVVSDKDNDAPLLSAA 177
>gi|254253075|ref|ZP_04946393.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia dolosa AUO158]
gi|124895684|gb|EAY69564.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia dolosa AUO158]
Length = 215
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E FVQDNHS S G +RGLH+Q
Sbjct: 42 LPEVKIIEPKVFGDARGYFYESFNAREFAEHVAAGVEFVQDNHSLSAK-GVLRGLHYQ-V 99
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR+ SP +G WV + +S N Q++IP GFAHGF+ L
Sbjct: 100 RHAQGKLVRVVQGEVFDVAVDIRKRSPNFGQWVGVVLSEENHRQLWIPPGFAHGFVVLSD 159
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ E++ + W D I I WP+ + P ++ KD L++ +
Sbjct: 160 AAQFLYKTTDYWYPEYERCIVWNDPEIGIEWPV--DVEPLLAAKDAAGVRLSEAE 212
>gi|293602507|ref|ZP_06684953.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Achromobacter piechaudii ATCC
43553]
gi|292819269|gb|EFF78304.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Achromobacter piechaudii ATCC
43553]
Length = 182
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 109/175 (62%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + + R F D RG+F ++++ K +E G++ FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVLVFEPRVFGDERGFFFESFNRKAFEEATGMRRDFVQDNHSRSSK-GVLRGLHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR G +FD+AVDIR++SPTYG WV +SA N Q+++P GFAHGF+ +
Sbjct: 67 QT-QGKLVRVSEGAVFDVAVDIRKSSPTYGQWVGTVLSAENKRQMWVPEGFAHGFLVISE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + ++W D SI I WPL + P +SEKD L + +
Sbjct: 126 YAEFLYKTTDYYAPQSERCISWDDPSIGIDWPL-GSDAPVMSEKDLRGRRLLEAE 179
>gi|253567875|ref|ZP_04845286.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_6]
gi|251841948|gb|EES70028.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_6]
Length = 189
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEGVFIIEPRLFKDDRGYFFESFSQREFNEKVRKVNFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G +VS+E++ +N Q +IP GFAHGF L
Sbjct: 67 YAQSKLVRVIKGAVLDVAVDIRKGSPTFGKYVSVELTEDNHRQFFIPRGFAHGFSVLTDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ + + +AW D + I W + + +SEKD + L F Y+
Sbjct: 127 VIFQYKCDNFYAPQSEGALAWDDPDLGIDWRVPANEI-VLSEKDNHHELLKDASWLFNYN 185
Query: 183 G 183
Sbjct: 186 E 186
>gi|159027477|emb|CAO89442.1| rfbC [Microcystis aeruginosa PCC 7806]
Length = 181
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ + + D RG+F ++++ K +E G+ FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVLIIEPQVYGDDRGFFLESFNQKDFREKTGVNTTFVQDNHSMSLK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ Q KLVR + G +FD+AVD R++SPT+G WVS +SA N ++P GFAHGF+ L
Sbjct: 66 -PHPQGKLVRVVNGSVFDVAVDARQSSPTFGQWVSCVLSAENKRIFWVPEGFAHGFIVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y +++ +AW D + I WPL I P +S KDQ ++
Sbjct: 125 ERAEFLYKTTNYYYPQYEKTIAWNDADLGIDWPL--EIPPILSPKDQAGQPFKSVE 178
>gi|24113423|ref|NP_707933.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str.
301]
gi|30063489|ref|NP_837660.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str.
2457T]
gi|110806007|ref|YP_689527.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 5 str.
8401]
gi|331658118|ref|ZP_08359080.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli TA206]
gi|585832|sp|P37780|RMLC_SHIFL RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|294899|gb|AAA53682.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri]
gi|454901|emb|CAA50770.1| rfbD [Shigella flexneri]
gi|24052446|gb|AAN43640.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str.
301]
gi|30041742|gb|AAP17469.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str.
2457T]
gi|110615555|gb|ABF04222.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri 5 str.
8401]
gi|187880659|gb|ACD37161.1| RmlC [Escherichia coli]
gi|187880668|gb|ACD37169.1| RmlC [Escherichia coli]
gi|281601491|gb|ADA74475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri 2002017]
gi|313649925|gb|EFS14345.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri 2a str.
2457T]
gi|331056366|gb|EGI28375.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli TA206]
gi|332756671|gb|EGJ87020.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri K-671]
gi|332756809|gb|EGJ87154.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri 2747-71]
gi|332766383|gb|EGJ96592.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri 2930-71]
gi|333002420|gb|EGK21982.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri K-218]
gi|333002550|gb|EGK22111.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri VA-6]
gi|333003378|gb|EGK22922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri K-272]
gi|333017072|gb|EGK36393.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri K-304]
gi|333017208|gb|EGK36528.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella flexneri K-227]
Length = 181
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 82/176 (46%), Positives = 113/176 (64%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFCVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK +FYS + G+ W DKSI+I WP+ + P +S+KD N D
Sbjct: 126 DEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQN---PLLSDKDINGQKFVDAD 178
>gi|288942437|ref|YP_003444677.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Allochromatium vinosum DSM
180]
gi|288897809|gb|ADC63645.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Allochromatium vinosum DSM
180]
Length = 189
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V IL+ + + D RG+F +TY + ELG+ VQDN SFS G +RGLH Q P
Sbjct: 8 IPGVLILEPKVWGDERGYFLETYRANQYAELGIPAPLVQDNQSFSRR-GVLRGLHAQHPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLV+ +AG +FD+AVDIRR SP +G WV + +S N Q +IP GFAHGF+ N
Sbjct: 67 -AQGKLVQVLAGEVFDVAVDIRRGSPHFGHWVGVTLSGENKRQFWIPPGFAHGFLVTGEN 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+YK TD+YS E + V W D + I WPL + P +S KD++ L I
Sbjct: 126 ALFVYKNTDYYSPETEFSVRWDDPDLGIDWPLA-GMTPELSAKDRDAARLRDIP 178
>gi|88604302|ref|YP_504480.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanospirillum hungatei
JF-1]
gi|88189764|gb|ABD42761.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanospirillum hungatei
JF-1]
Length = 190
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 84/181 (46%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + ++ + F+DSRG+F ++Y+ K G+ D FVQDNHS S G +RGLH+Q P
Sbjct: 11 LAGILLVVPQYFKDSRGFFVESYNKKDFSHAGITDEFVQDNHSKSQK-GVLRGLHYQY-P 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR + G I+D+AVDIR SPTYG ++ + N+ +YIP GFAHGF+ LE +
Sbjct: 69 HAQGKLVRVLKGSIYDVAVDIRIGSPTYGKPFAVTLRENDPAMLYIPVGFAHGFLALEDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQIDSPFE 180
TEV+YKVTD Y D+G+ W D ++I WPL P +SEKD P L+++ SPF
Sbjct: 129 TEVMYKVTDLYYPSGDAGLLWNDPDLNIPWPLDIIGIKEPILSEKDTKHPILSELRSPFT 188
Query: 181 Y 181
Y
Sbjct: 189 Y 189
>gi|253579894|ref|ZP_04857162.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848893|gb|EES76855.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 184
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++++ F D+RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 12 IKGLKVVEPTVFGDARGYFMETYNYNDFKEAGIDVEFVQDNQS-SSHKGVLRGLHFQI-N 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R S TYG W + +SA N Q +IP GFAHGF+ L +
Sbjct: 70 YPQDKLVRVVNGEVFDVAVDLREGSETYGKWFGVVLSAENKKQFFIPKGFAHGFLVLSEH 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK +DFY + G+ W D I + WP+ + + S S+KD +
Sbjct: 130 AEFVYKCSDFYHPNDEGGLIWNDPDIGVEWPIPEGMELSFSDKDTKWGSFKE 181
>gi|152971033|ref|YP_001336142.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955882|gb|ABR77912.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 184
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + R F D+RG+F +++SSK+ E G Q FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPEVLIFEPRVFGDARGFFFESFSSKVFNEAVGRQVEFVQDNHSQSQK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+ G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGFM L
Sbjct: 66 DPHAQGKLVRCVEGEVFDVAVDIRRSSPTFGKWVGAVLSAENKRQLWIPEGFAHGFMALS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y+ + + + W D I I WP L S+SEKD L +
Sbjct: 126 DTVQFVYKATNYYAPQSEQSIIWNDPEIGIDWPALSDCALSLSEKDLQAHTLATAE 181
>gi|307340771|gb|ADN43834.1| RmlC [Escherichia coli]
Length = 182
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 78/172 (45%), Positives = 116/172 (67%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y+ +H+ + W+D ++I+WP+ + P +SEKD+N
Sbjct: 126 ETAEFVYKTTNYYAAKHERCIQWKDGMLNISWPIGN--APILSEKDRNGNGF 175
>gi|240138979|ref|YP_002963454.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
AM1]
gi|240008951|gb|ACS40177.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
AM1]
Length = 183
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++ D RGWFS+ Y + +L E G+ + FVQDN SFS GTIRGLHFQ
Sbjct: 7 EIPAVKRVIPKRHGDDRGWFSEIYRADILSEHGIANAFVQDNQSFSAPAGTIRGLHFQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R +AG I D+AVD+R +SP+YG V++ + A G Q+++P GFAHGF TLE
Sbjct: 67 PNAQAKLIRVLAGAILDVAVDLRSDSPSYGRHVAVRLDATGGEQLFVPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T V YKV +YS D + W D +I I WP+ + +S KD+ P L + F
Sbjct: 127 DTMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADA-ILSGKDKAAPLLADLGRVF 183
>gi|91976051|ref|YP_568710.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisB5]
gi|91682507|gb|ABE38809.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisB5]
Length = 185
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 92/178 (51%), Positives = 119/178 (66%), Gaps = 1/178 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+++ + F D+RG F +TY+ K E G+ FVQDN SFS + GTIRGLHFQ PP
Sbjct: 9 IEAVKVIVPKSFADTRGTFCETYNHKRFVEHGISFEFVQDNQSFSAEAGTIRGLHFQSPP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR + GRI D+AVD+RR+SPT+G WV+ E+SA NG Q+ +P GFAHGF TLE +
Sbjct: 69 AAQDKLVRVLRGRILDVAVDLRRSSPTFGKWVAEELSAENGKQLLVPVGFAHGFCTLEPD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
T V+YKVT +YS HD GVAW D + I WP+ + +S+KD P + FE
Sbjct: 129 THVLYKVTSYYSPAHDLGVAWDDPDLAIDWPIR-SDEAVLSDKDLRQPSFRSLAPVFE 185
>gi|59803196|gb|AAX07743.1| dTDP-4-dehydrorhamnose-3,5-epimerase0 [Escherichia coli]
Length = 179
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I++ + F DSRG+F + + + + G++ FVQDN S S +RGLHFQ+
Sbjct: 8 LKDCVIIEPKVFGDSRGFFLEAWHKEKYENAGIKGNFVQDNRSRSSR-NVLRGLHFQKTK 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV I+G ++D+AVD+R +S T+G +VS+ +S Q+Y+P GFAHGF L
Sbjct: 67 -PQGKLVSVISGEVYDVAVDLRHDSETFGQYVSVLLSGKKNNQLYVPPGFAHGFCVLSEY 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ YK TDFY + + G+ W D I I WP+ + P +SEKD L L +
Sbjct: 126 ADFHYKCTDFYDPKDEGGIIWNDPDIAIDWPVTE---PLLSEKDIKLITLAEYKK 177
>gi|253996731|ref|YP_003048795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylotenera mobilis JLW8]
gi|253983410|gb|ACT48268.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylotenera mobilis JLW8]
Length = 186
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/178 (42%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + + D RG+F ++++ + ++L G++ FVQDNHS S +RGLH+Q
Sbjct: 8 IPDVLILEPQVYGDERGFFFESFNQQKFEQLTGVKTQFVQDNHSKSAA-NVLRGLHYQIS 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AG +FD+AVD+R++S T+G WV +S++N Q+++P GFAHGF+ L+
Sbjct: 67 Q-PQGKLVRVVAGEVFDVAVDLRKHSQTFGQWVGAILSSDNKRQMWVPEGFAHGFLVLKD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP---LLDTILPSVSEKDQNLPFLNQID 176
NTE +YK TD+Y+ +H+ + W D I I WP L +P +S KDQ L D
Sbjct: 126 NTEFLYKTTDYYAPQHERCIRWDDADIGIEWPTASLAAHAIPVLSAKDQLGLRLVDAD 183
>gi|238021433|ref|ZP_04601859.1| hypothetical protein GCWU000324_01333 [Kingella oralis ATCC 51147]
gi|237868413|gb|EEP69419.1| hypothetical protein GCWU000324_01333 [Kingella oralis ATCC 51147]
Length = 180
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+IL+ + F D RG+F +T+ E + FVQ+NHS S + G +RGLH+Q
Sbjct: 8 IPDVKILEPQVFGDERGFFMETFRDNWFNEHIARRTFVQENHSKS-NKGVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G + D+AVD+RR+SPT+G W +SA+N Q+++P GFAHGF LE +
Sbjct: 67 T-QGKLVRVVVGSVLDVAVDLRRSSPTFGKWAGAVLSADNKRQLWVPEGFAHGFYVLEDH 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
TE +YK TD+Y+ + + + W D +I I W L PS+S KD L +
Sbjct: 126 TEFVYKCTDYYNPKAEHSLIWNDPTIGIDWQLNGE--PSLSAKDLAGKPLAEA 176
>gi|237714662|ref|ZP_04545143.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D1]
gi|262406527|ref|ZP_06083076.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_22]
gi|294806945|ref|ZP_06765768.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides xylanisolvens SD
CC 1b]
gi|229445431|gb|EEO51222.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D1]
gi|262355230|gb|EEZ04321.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_22]
gi|294445832|gb|EFG14476.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides xylanisolvens SD
CC 1b]
Length = 189
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEGVVIIEPRLFKDDRGYFFESFSQREFTEKVRKVDFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G V++E++ N Q +IP GFAHGF+ L
Sbjct: 67 YAQSKLVRVIKGSVLDVAVDIRKGSPTFGEHVAVELTEENHRQFFIPRGFAHGFVVLTEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ + + +AW D ++ I W + + +SEKD++ L + F+Y+
Sbjct: 127 VIFQYKCDNFYAPQCEGALAWDDPALKIDWKVPADKI-ILSEKDKHHERLEEASWLFDYN 185
Query: 183 G 183
Sbjct: 186 E 186
>gi|224535678|ref|ZP_03676217.1| hypothetical protein BACCELL_00542 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522716|gb|EEF91821.1| hypothetical protein BACCELL_00542 [Bacteroides cellulosilyticus
DSM 14838]
Length = 189
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/182 (41%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG F ++++ K +E + FVQDN S S G IRGLHFQ+ P
Sbjct: 8 IEGVVIIEPRLFKDGRGCFFESFNQKEFEEKVCKTTFVQDNESKSSY-GVIRGLHFQKTP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR + G + D+AVDIR+ SPT+G V++E++ NN Q++IP GFAHGF L
Sbjct: 67 FAQSKLVRVVKGTVLDVAVDIRKGSPTFGQHVAVELTENNYRQLFIPRGFAHGFSVLSEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY + + +AW D ++I W + + +SEKD+ P L + F+Y
Sbjct: 127 VVFQYKCDNFYVPQSECALAWDDLELNIDWRIPAENV-ILSEKDRAHPNLRNSEWLFDYS 185
Query: 183 GL 184
+
Sbjct: 186 EI 187
>gi|166362759|ref|YP_001655032.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microcystis aeruginosa
NIES-843]
gi|166085132|dbj|BAF99839.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microcystis aeruginosa
NIES-843]
Length = 181
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ + + D RG+F ++++ K +E G+ FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVLIIEPQVYGDDRGFFLESFNQKDFREKTGVNTTFVQDNHSMSLK-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLVR + G +FD+AVD R++SPT+G WV +SA N ++P GFAHGF+ L
Sbjct: 66 PN-PQGKLVRVVNGSVFDVAVDARQSSPTFGQWVGCILSAENKRIFWVPEGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y +++ + W D + I WPL P +S KDQ ++
Sbjct: 125 DRAEFLYKTTNYYYPQYEKTILWNDADLGIDWPL--ETPPILSPKDQAGQPFKSVE 178
>gi|170698773|ref|ZP_02889837.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria
IOP40-10]
gi|170136330|gb|EDT04594.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria
IOP40-10]
Length = 183
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ + F D+RG+F ++++ + E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKLIEPKVFGDARGYFYESFNGREFAEHIGPGIEFVQDNHSRSAK-GVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIRR SPT+G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRRRSPTFGKWVGVILSADNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L++ +
Sbjct: 128 AAQFLYKTTDYWYPEHERCIVWDDPEIGIEWPI--DAAPVLAPKDAAGKRLSEAE 180
>gi|67920202|ref|ZP_00513722.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Crocosphaera watsonii WH
8501]
gi|67857686|gb|EAM52925.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Crocosphaera watsonii WH
8501]
Length = 181
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ R F D RG+F ++Y+ K E G+ FVQDNHS S +RGLH+Q
Sbjct: 7 KIPDVVIIEPRIFGDDRGFFYESYNHKAFTEATGISRNFVQDNHSKSER-NVLRGLHYQ- 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G + D+AVDIR++SPT+G WVS +SA N Q ++P GFAHGF+
Sbjct: 65 LQQTQGKLVRVVTGEVLDVAVDIRKSSPTFGQWVSCLLSAENKRQFWVPEGFAHGFVVSS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ EH+ + W D + I W L P +S+KDQ Q +
Sbjct: 125 DAAEFLYKTTDYYAPEHERSILWNDPDLAIDWQLKGE--PKLSKKDQEGLPFKQAE 178
>gi|319638873|ref|ZP_07993631.1| DTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Neisseria mucosa C102]
gi|317399777|gb|EFV80440.1| DTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Neisseria mucosa C102]
Length = 185
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSSK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 131 AEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 181
>gi|332705308|ref|ZP_08425386.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lyngbya majuscula 3L]
gi|332355668|gb|EGJ35130.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lyngbya majuscula 3L]
Length = 181
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/176 (46%), Positives = 112/176 (63%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ R F D RG+F ++Y+ ++L + G+ FVQDN+S S G +RGLH+Q
Sbjct: 7 KIPEVLILEPRVFGDDRGFFFESYNKRVLADKAGITAEFVQDNYSRSAQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G IFD+AVDIR++SPT+G WVS +SA N QI+IP GFAHGF+ +
Sbjct: 66 QQ-PQGKLVRVLLGTIFDVAVDIRKSSPTFGQWVSCLLSAENKQQIWIPAGFAHGFLVVS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TDFY+ +H+ + W D + I WPL D+ PS+S KDQ +
Sbjct: 125 EFAEVLYKTTDFYAPDHERTIVWNDPDLAIHWPLTDS--PSLSAKDQAGKSFKTAE 178
>gi|167031308|ref|YP_001666539.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida GB-1]
gi|166857796|gb|ABY96203.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida GB-1]
Length = 181
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F DSRG+F + ++++ + G+ FVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVLIIEPKVFGDSRGFFFEAFNAREFARQTGVNVEFVQDNHSRSIK-GVLRGLHYQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G I DIAVD+R++SPT+G WV++ +SA+N Q++IP GFAHGF +
Sbjct: 67 NT-QGKLVRVVHGEIRDIAVDVRKSSPTFGQWVAVHLSADNHRQLWIPPGFAHGFAVMSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ D + W D + I W L P +S+KD+ L + +
Sbjct: 126 SAEFLYKTTDYYNPGADRCIRWDDPQLGIDWGL--RQPPVLSDKDKVGLPLAEAE 178
>gi|254281914|ref|ZP_04956882.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium
NOR51-B]
gi|219678117|gb|EED34466.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium
NOR51-B]
Length = 183
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 108/179 (60%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V +LK R F D RG+F + ++ + + G+ FVQDNHS S G +RGLHFQ
Sbjct: 8 LSGVMLLKPRVFGDERGFFLEAWNQRTYADAGIDVHFVQDNHSRSRQ-GILRGLHFQTEQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR +G +FD+ VD+R +SPT G W +SA+N Q++IP GFAHGF L +
Sbjct: 67 T-QGKLVRVTSGSVFDVVVDLRADSPTCGQWYGATLSASNHEQLWIPPGFAHGFYVLSES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ +YK +D+Y E + +AW D S+ I WPL++ P +S KD ++Q+ F +
Sbjct: 126 ADFLYKCSDYYHPESELTLAWNDPSVGIEWPLVNDQPPQLSAKDATGLPIDQVP-LFRF 183
>gi|294341170|emb|CAZ89571.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) (dTDP-L-rhamnose synthetase) [Thiomonas
sp. 3As]
Length = 187
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 10/185 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++Y+ K + GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPKVFGDDRGFFFESYNRKTFALDTGLDVEFVQDNHSKSAQ-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G ++D+AVD+RR+SP + WV +E+SA N +++P GF HGF+ L
Sbjct: 66 VKPQGKLVRAVTGTVWDVAVDLRRSSPRFKQWVGVELSAQNQRLLWVPPGFGHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EHD +AW D + I WPL PS++ KD P L Q +
Sbjct: 126 TADFLYKTTDYWYPEHDRNLAWNDPELAIAWPLKGLHLPGGQPSLAAKDAAAPRLAQAE- 184
Query: 178 PFEYD 182
YD
Sbjct: 185 --VYD 187
>gi|158333602|ref|YP_001514774.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acaryochloris marina
MBIC11017]
gi|158303843|gb|ABW25460.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acaryochloris marina
MBIC11017]
Length = 187
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 79/188 (42%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ R F D RG+F +TY + G+ ++FVQDNHS S GT+RGLHFQ
Sbjct: 8 LPGVLVIEPRVFSDQRGFFLETYHRQRYTASGIDEIFVQDNHSRSAH-GTLRGLHFQ-LK 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR AG +FD+AVDIRR SP +G W +S N Q+Y+P GFAHGF L
Sbjct: 66 SPQGKLVRVSAGEVFDVAVDIRRGSPYFGQWFGEYLSGENNKQMYVPPGFAHGFCVLSET 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+ +YK +DFY + GVAW D ++ I WP+ P +S+KD LP ++++ D
Sbjct: 126 ADFMYKCSDFYDPTDEQGVAWDDPALAIDWPID---QPILSKKDAALPKMSEL-----MD 177
Query: 183 GLPLLSLN 190
LP +++
Sbjct: 178 CLPRFAMS 185
>gi|78186305|ref|YP_374348.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Chlorobium luteolum
DSM 273]
gi|78166207|gb|ABB23305.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium luteolum DSM 273]
Length = 194
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V L+ D RG+F +++ +++E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IPDVLELEPEVLGDQRGYFLESFRQDVIEESVGRVSFVQDNESKSRR-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q+KLVR ++GR+ D+A+DIR SP YG V+ E+ +++P GFAHGF+ L
Sbjct: 67 YTQSKLVRVVSGRVLDVALDIRIGSPWYGRHVACELDGERKNMLWVPKGFAHGFVVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK ++Y H+ G+ W D ++ I W L D L VS +D +LP L+ DS F Y+
Sbjct: 127 AVFAYKCDNYYMPSHEGGIHWNDPALGIDWKL-DPSLILVSARDSSLPGLSSADS-FRYE 184
Query: 183 GLP 185
Sbjct: 185 EFS 187
>gi|254561587|ref|YP_003068682.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
DM4]
gi|254268865|emb|CAX24826.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
DM4]
Length = 183
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++ D RGWFS+ Y + +L E G+ + FVQDN SFS GTIRGLHFQ
Sbjct: 7 EIPAVKRVIPKRHGDDRGWFSEIYRADILSEHGIANAFVQDNQSFSAPAGTIRGLHFQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R +AG I D+AVD+R SP+YG V++ + A G Q+++P GFAHGF TLE
Sbjct: 67 PNAQAKLIRVLAGAILDVAVDLRSGSPSYGRHVAVRLDATGGEQLFVPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T V YKV +YS D + W D +I I WP+ + +S KD+ P L + F
Sbjct: 127 DTMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADA-ILSGKDKAAPLLADLGRVF 183
>gi|16588697|gb|AAL26875.1|AF315583_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Acinetobacter calcoaceticus]
Length = 186
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 111/180 (61%), Gaps = 6/180 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL----KELGLQDV-FVQDNHSFSFDCGTIRGLH 57
I + IL F D RGWF ++++ + +ELGL FVQDNHS S G +RGLH
Sbjct: 8 IEGLLILHPNVFGDDRGWFMESFNQQRFAQALEELGLSVPTFVQDNHSLSQK-GVLRGLH 66
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+Q PYAQ KLVR + GR++D+AVDIR +S TYG WV +E+SA N +IP GFAHGF+
Sbjct: 67 YQNAPYAQGKLVRVVQGRVWDVAVDIRPDSKTYGEWVGVELSAENKTMFWIPEGFAHGFI 126
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+LE NT+ +YK T++Y+ E + + W D ++ I WPL VS+KDQ I
Sbjct: 127 SLEDNTQFLYKTTNYYNKESEGAIIWNDPTLAIDWPLAKVDEVLVSDKDQVASIWKNIKK 186
>gi|323960875|gb|EGB56495.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli H489]
Length = 183
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I + + F D RG+F ++++ KL +E G FVQDNHS S G +RGLH+Q P
Sbjct: 8 IPGVLIFEPKVFGDERGFFFESFNHKLFEEAVGYPVTFVQDNHSKS-SKGVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVRC+AG +FD+AVDIR++SP++G WV + +S N Q++IP GFAHGF+TL
Sbjct: 67 PHAQGKLVRCVAGEVFDVAVDIRKSSPSFGQWVGVHLSGENKRQLWIPEGFAHGFVTLTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK T++Y+ D G+AW D +I I WP L + + S KD L +
Sbjct: 127 SAEFLYKTTNYYAPASDRGIAWNDPTIGIRWPELKADILT-SAKDSIAKSLESAE 180
>gi|229016571|ref|ZP_04173511.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1273]
gi|229022778|ref|ZP_04179302.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1272]
gi|228738590|gb|EEL89062.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1272]
gi|228744747|gb|EEL94809.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1273]
Length = 181
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFTESYNKKVLETLGITYSFVQDNVSYSAQAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKESPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSG+ W+DK + I WP+ + P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSAQHDSGLLWEDKELAIPWPVTN---PILSDKDRILPSLQEYEDSF 181
>gi|289662630|ref|ZP_06484211.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 185
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ ++D RG+F ++++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCLLIEPAVYDDGRGYFFESWNAERFAKHGLPANFVQSNVS-SSSKGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+A+DIR SP +G WV+ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAIDIRHGSPHFGQWVAALLSAENNRQFWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+GV W D +I I WP+ + P +S KD PFL + + +
Sbjct: 126 AVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISN---PLLSAKDAAAPFLADVPA----E 178
Query: 183 GLPLLSL 189
LP+ +
Sbjct: 179 RLPVYTP 185
>gi|86357153|ref|YP_469045.1| dTDP-rhamnose-3,5-epimerase protein [Rhizobium etli CFN 42]
gi|86281255|gb|ABC90318.1| probable dTDP-rhamnose-3,5-epimerase protein [Rhizobium etli CFN
42]
Length = 192
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + + +F D RG+FS+ + +E F+QDN S S GT+RGLHFQ PP
Sbjct: 8 LEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFIQDNESLSAQAGTVRGLHFQIPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVRC+AGRI D+ VDIR SP+YG W+S E+S G Q++IP GFAHGF+T+E N
Sbjct: 68 LAQGKLVRCLAGRIMDVVVDIRVGSPSYGKWLSQELSPETGKQLWIPAGFAHGFVTIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YKVT YS +H+ G+AW D +I I WP + + S S+KD+ LP L + S F Y
Sbjct: 128 SVISYKVTAPYSPQHERGIAWNDPAIGIGWPFDERDMVS-SDKDKTLPRLADLPSHFSY 185
>gi|229171963|ref|ZP_04299528.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus MM3]
gi|228611306|gb|EEK68563.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus MM3]
Length = 181
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFTESYNKKVLEALGVTYSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQAMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSGV W+DK + I WP+ + P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGVLWEDKDLAIPWPVTN---PILSDKDRILPLLQECEDSF 181
>gi|149175092|ref|ZP_01853715.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Planctomyces maris DSM
8797]
gi|148846070|gb|EDL60410.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Planctomyces maris DSM
8797]
Length = 182
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I+ R F D RG+F +T+ + ++ G+ FVQDNHS S G +RGLHFQ
Sbjct: 7 EFPGLVIITPRVFSDDRGFFKETFQQERYEQAGIPGPFVQDNHSRSSA-GILRGLHFQIH 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
QAKLV + G I D+ VD+R+NSPT+G +S+ +SA N Q+++P GFAHGF L
Sbjct: 66 R-PQAKLVFAVEGEILDVCVDLRKNSPTFGKSISVLLSAENHKQLFVPAGFAHGFYVLSP 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD+Y EH+ + W D +++I WPL D P +SEKD+ L++ +
Sbjct: 125 RADFMYKCTDYYFPEHERTLLWNDPALEIEWPLSDE--PILSEKDRKGLPLSECE 177
>gi|297538358|ref|YP_003674127.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylotenera sp. 301]
gi|297257705|gb|ADI29550.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylotenera sp. 301]
Length = 180
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ F D RG+F ++++ + G FVQDNHS S + +RG+H+Q
Sbjct: 8 IADVLVIEPNVFGDDRGFFFESFNHAKFEAAIGKPVKFVQDNHSKSAE-NVLRGMHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIR+NS T+G WV +SA N Q+++P GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVVQGIVFDVAVDIRKNSSTFGQWVGEILSAENKKQLWVPEGFAHGFVVLSK 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ E + +AW D IDI WP+ +S KDQ + +
Sbjct: 126 TAEFLYKTTDYYAPEFERCIAWNDPEIDIKWPI--NGAALLSAKDQLGKSFAEAE 178
>gi|226941907|ref|YP_002796981.1| RfbC [Laribacter hongkongensis HLHK9]
gi|226716834|gb|ACO75972.1| RfbC [Laribacter hongkongensis HLHK9]
Length = 182
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 115/175 (65%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ R FED RG+F ++++ + +E G FVQDNHS S G +RGLH+Q+
Sbjct: 8 IAEVKIIEPRVFEDERGFFFESFNQQRFEEAIGYPVEFVQDNHSRS-SRGVLRGLHYQQA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVRC+AG ++D+AVD+R++SPT+G V +E+SA N Q++IP GFAHGF+TL
Sbjct: 67 PHAQGKLVRCVAGAVWDVAVDLRQSSPTFGQSVGVELSAGNRRQLWIPAGFAHGFLTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + + W D + I WP + + P +S KD +Q
Sbjct: 127 SAEFLYKTTDYYAPAAEVCLRWNDPVLAIAWP--EAVSPVLSVKDGQGLDWHQAP 179
>gi|167623434|ref|YP_001673728.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella halifaxensis
HAW-EB4]
gi|167353456|gb|ABZ76069.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella halifaxensis
HAW-EB4]
Length = 189
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-----DVFVQDNHSFSFDCGTIRGLH 57
I V + + + F D RG+F +T+ + L + FVQ+N S S +RGLH
Sbjct: 9 IPDVLLFEPKVFGDERGFFMETFRQSEFEALFAKVGMACPSFVQENMSRSQKH-VLRGLH 67
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+Q + Q KLVR AG IFD+AVDIR+ S TYG W +SA N LQ+YIP GFAHGF+
Sbjct: 68 YQ-ETHPQGKLVRVTAGSIFDVAVDIRKASKTYGQWFGQVLSAENRLQMYIPPGFAHGFL 126
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
TL + ++IYK T +Y+ E + + W D ++I WPL + + P +SEKD
Sbjct: 127 TLSDHADIIYKCTAYYAAEFEKCITWNDPQLNIQWPLEEGVEPILSEKDGKADKF 181
>gi|121633959|ref|YP_974204.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis FAM18]
gi|120865665|emb|CAM09389.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis FAM18]
Length = 184
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ E + + W D ++ I WPL P++S KD L +
Sbjct: 131 AEFVYKCTDYYNPEAEHSLIWNDPTVGIDWPL--QTAPNLSPKDLAGKVLAEA 181
>gi|29345874|ref|NP_809377.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29337767|gb|AAO75571.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 189
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEGVFIIEPRLFKDDRGYFFESFSQRKFNEKVRKVNFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G +VS+E++ +N Q +IP GFAHGF L
Sbjct: 67 YAQSKLVRVIKGAVLDVAVDIRKGSPTFGKYVSVELTEDNHRQFFIPRGFAHGFSVLTDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ + + +AW D + I W + + +SEKD + L F Y+
Sbjct: 127 VIFQYKCDNFYAPQSEGALAWDDPDLGIDWRVPANEI-VLSEKDNHHELLKDASWLFNYN 185
Query: 183 G 183
Sbjct: 186 E 186
>gi|159904979|ref|YP_001548641.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanococcus maripaludis C6]
gi|159886472|gb|ABX01409.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanococcus maripaludis C6]
Length = 187
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 116/180 (64%), Gaps = 4/180 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ + F D RG+F ++Y S + G+ + FVQDNHS S G +RGLHFQ+
Sbjct: 8 LEIPEVILIEPKVFPDERGFFLESYKSSDFFDAGITENFVQDNHSKSKY-GVLRGLHFQK 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KLVRCI G IFD+AVD+R+NSP YG WV +S N +YIP GFAHGF L
Sbjct: 67 NPKAQGKLVRCITGEIFDVAVDLRKNSPNYGKWVGEILSEENKKMLYIPKGFAHGFCVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ E+IYK T+ Y+ E D+G+ W D +I+I WP++D P +SEKD LP L D F
Sbjct: 127 SDAEIIYKCTEEYAPECDAGIKWNDNAIEIDWPVVD---PIISEKDSLLPNLLDSDINFV 183
>gi|330970569|gb|EGH70635.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 181
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F +++++K + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNAKAFQAATGLTREFVQDNHSRSQR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
N E +YK TD+Y+ + +AW D + I W P++S KDQ L + D
Sbjct: 125 ENAEFLYKTTDYYTPSAERCIAWDDAELAIDWQFDG--QPNLSAKDQQGKRLKEAD 178
>gi|229101900|ref|ZP_04232614.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-28]
gi|228681483|gb|EEL35646.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-28]
Length = 181
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFTESYNKKVLETLGITYSFVQDNVSYSAQAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKGSPTFRQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTL 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ + P +S+KD+ LP L + D F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKELAIPWPVAN---PILSDKDRILPLLQEYDDSF 181
>gi|225077086|ref|ZP_03720285.1| hypothetical protein NEIFLAOT_02139 [Neisseria flavescens
NRL30031/H210]
gi|241758982|ref|ZP_04757094.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria flavescens SK114]
gi|224951643|gb|EEG32852.1| hypothetical protein NEIFLAOT_02139 [Neisseria flavescens
NRL30031/H210]
gi|241320803|gb|EER57036.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria flavescens SK114]
Length = 184
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCDRTFVQENHSKSGK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 131 AEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 181
>gi|282801708|gb|ADB02818.1| RmlC [Escherichia coli]
Length = 180
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 4/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I+K ED RG+F ++++ K+ E+ + +FVQDNHS S GT+RGLHFQ
Sbjct: 7 KIEDVKIIKPIIHEDERGFFMESWNQKVFNEVIGKTIFVQDNHSKS-YKGTLRGLHFQ-T 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G +FD+ VD+R S T+G WV + +S+ N Q++IP GFAHGF +
Sbjct: 65 SNPQGKLVRVINGEVFDVVVDLRHQSKTFGKWVGVYLSSVNNYQLWIPEGFAHGFYVVSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ E +YK TD+Y+ ++W D + I WPL P +SEKD++ + F
Sbjct: 125 HAEFVYKCTDYYNPYSQQTLSWDDPELGILWPL--DTAPILSEKDKSGSSFKNLKGLF 180
>gi|328944086|ref|ZP_08241551.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium vaginae DSM 15829]
gi|327492055|gb|EGF23829.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium vaginae DSM 15829]
Length = 212
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 77/184 (41%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ + I+ T+ F D RG+F +TY + G+ FVQDNHS S G +RGLHFQ
Sbjct: 31 KVDGLFIINTKIFGDERGFFMETYKEPDFIQAGITTKFVQDNHSKSCR-GVLRGLHFQIH 89
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q+KLVR + GR+FD+AVD+R++S TYG W + +S +N Q +IP GFAHGF+ L
Sbjct: 90 -HPQSKLVRVVKGRVFDVAVDLRKDSATYGQWEGVILSEDNHTQFFIPQGFAHGFLVLSD 148
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL------DTILPSVSEKDQNLPFLNQI 175
E YK D Y + G+ W D I I WP L D +SEKD+ PFL
Sbjct: 149 EAEFCYKCDDIYHPGDEGGIMWNDPDIAIEWPALSGDTAFDPSELILSEKDKTHPFLRDS 208
Query: 176 DSPF 179
F
Sbjct: 209 KVSF 212
>gi|197124807|ref|YP_002136758.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaeromyxobacter sp. K]
gi|196174656|gb|ACG75629.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaeromyxobacter sp. K]
Length = 188
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 7/182 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + +++ R F D+RG+F ++++ K G FVQDNHS S G +RGLH+Q
Sbjct: 8 LPGLLVVEPRVFGDARGYFFESFNQKAFDAAVGRHVEFVQDNHSLSGR-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLVR G +FD+AVD+RR SPT+G W +SA N Q++IP GFAHGF+
Sbjct: 66 PNPQGKLVRVTRGEVFDVAVDLRRGSPTFGRWAGEILSAENKRQLWIPEGFAHGFLVRSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E +YK+TD++ EH+ + W D + I WP + P VS KD + +
Sbjct: 126 EAEFVYKITDYWHPEHEHCIRWDDPVLGIDWP-TGGVRPLVSAKDAAGRPFREAA---VF 181
Query: 182 DG 183
+G
Sbjct: 182 EG 183
>gi|119475336|ref|ZP_01615689.1| dTDP-4-dehydrorhamnose 3,5-epimerase [marine gamma proteobacterium
HTCC2143]
gi|119451539|gb|EAW32772.1| dTDP-4-dehydrorhamnose 3,5-epimerase [marine gamma proteobacterium
HTCC2143]
Length = 184
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I + F D RG+F +TY++ KE G+ + F+QDN SFS G +RGLH+Q
Sbjct: 7 ELPGVIIFEPTVFGDDRGYFLETYNADRYKEAGISENFIQDNLSFS-RKGILRGLHYQ-T 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLV+ I G ++D+AVD+R SPT+G W +S +N QIY+P GFAHGF+
Sbjct: 65 PMEQGKLVQVIKGEVYDVAVDVRAGSPTFGHWYGSVLSESNKRQIYVPAGFAHGFVVTSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
YK T+ Y+ ++ +AW D + I WP+ D P VSEKDQ L +
Sbjct: 125 TALFSYKCTELYNPTNERRIAWNDTDLAINWPITD---PLVSEKDQQAVLLKDLQK 177
>gi|283785858|ref|YP_003365723.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Citrobacter rodentium ICC168]
gi|282949312|emb|CBG88923.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Citrobacter rodentium ICC168]
Length = 182
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 112/175 (64%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAIGRKVDFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAKLVRCIAG +FD+AVDIR +SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 APYAQAKLVRCIAGEVFDVAVDIRESSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y E D G+ W D I I W + +S+KD+ P + +
Sbjct: 126 ETAEFVYKTTNYYHPECDRGIRWDDAYIGIKWG--NDYNVKLSDKDKKNPTMKDV 178
>gi|311697176|gb|ADQ00048.1| dTDP-4-dehydrorhamnose 3,5-epimerase [marine bacterium HP15]
Length = 181
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++++ + F D RG+F +T++ K +E G+ FVQDNHS S T+RGLH+Q
Sbjct: 7 KIPAVKLIEPKVFGDERGFFMETWNEKAFREAGIDATFVQDNHSRSVK-NTLRGLHYQIK 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR G +FD+AVD+R +S T G WV +S N +++P GFAHGF+
Sbjct: 66 Q-PQGKLVRVTRGEVFDVAVDLRSDSSTCGQWVGEYLSEKNNRMLWVPPGFAHGFLVTSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ YK TDFY+ E++ + WQD + I WPL ++ P +S KDQ + +
Sbjct: 125 TADFQYKCTDFYAPEYERSIYWQDLQLRICWPLQKSLKPLISRKDQLAISYAEAEK 180
>gi|228473995|ref|ZP_04058736.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga gingivalis
ATCC 33624]
gi|228274509|gb|EEK13350.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga gingivalis
ATCC 33624]
Length = 188
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 3/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + F D RG+F +++S + E FVQDN S S G +RGLHFQRPP
Sbjct: 8 IEGLVIIEPKVFSDERGYFFESFSQQKFVEEVCNTTFVQDNESKSSY-GVLRGLHFQRPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR + G ++D+AVDIRR SPT+G ++ +E++ N Q +IP GFAHGF+ L
Sbjct: 67 YAQSKLVRVVKGIVWDVAVDIRRGSPTFGQYIGVELTEQNKRQFFIPRGFAHGFVVLSPE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK FY+ H+ V W D +I I W + + +S+KDQ P L ++ F+Y
Sbjct: 127 AIFQYKCDSFYAPTHEGSVLWNDPTIGIDWKIPHNDI-ILSQKDQQGPLLQEV-WEFDYK 184
Query: 183 G 183
Sbjct: 185 E 185
>gi|32170823|gb|AAP57699.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Sphingomonas elodea]
Length = 188
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 1/182 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V KF D RG+FS+ + L G++ +VQDN SFS GTIRGLH Q P
Sbjct: 8 ELSGVIEFTPPKFGDHRGFFSEVFKQSQLDAEGVEARWVQDNQSFSAAAGTIRGLHLQAP 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVR + G I+D+AVDIRR SPTYG WV +E+SA Q+ +P G+AHGFMTL
Sbjct: 68 AFAQAKLVRVLPGAIYDVAVDIRRGSPTYGRWVGVELSAEKWNQLLVPAGYAHGFMTLVP 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ E++YKV+ YS + + + W D + ITWP + P +SEKD + ++PF Y
Sbjct: 128 DCEILYKVSAKYSKDSEMAIRWDDPDLAITWP-DIGVEPVLSEKDAVATPFVEFNTPFFY 186
Query: 182 DG 183
G
Sbjct: 187 QG 188
>gi|255321114|ref|ZP_05362280.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acinetobacter radioresistens
SK82]
gi|255301668|gb|EET80919.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acinetobacter radioresistens
SK82]
Length = 183
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-----FVQDNHSFSFDCGTIRGL 56
I + IL F D RGWF ++++ + + Q FVQDNHS S +RGL
Sbjct: 7 KIEGLLILHPNVFGDDRGWFMESFNQQRFAQALEQLNLPVPTFVQDNHSLSQK-SVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q PYAQ KLVR + GR++D+AVDIR +S TYG WV +E+SA N +IP GFAHGF
Sbjct: 66 HYQNAPYAQGKLVRVVQGRVWDVAVDIRPDSKTYGEWVGVELSAENKTMFWIPEGFAHGF 125
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ LE NT+ +YK T++Y+ E + + W D ++ I WPL + VS+KDQ
Sbjct: 126 IALEDNTQFLYKTTNYYNKESEGTIIWNDPTLAINWPLDEVGEVLVSDKDQIADAFK 182
>gi|237711069|ref|ZP_04541550.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 9_1_42FAA]
gi|229454913|gb|EEO60634.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 9_1_42FAA]
Length = 189
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG+F +++S + +E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEDVVIIEPRLFKDERGYFFESFSQREFEEKIRKISFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G V++E++ N LQ++IP GFAHGF L
Sbjct: 67 YAQSKLVRVIKGAVLDVAVDIRKGSPTFGKHVAIELTEENHLQLFIPRGFAHGFSVLSQE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ + + +AW D ++I W + T +SEKD++ L F+Y+
Sbjct: 127 VIFQYKCDNFYAPQSEGALAWDDSDLNINWRIP-TNQIILSEKDKHHEKLKDASWLFDYN 185
>gi|209518632|ref|ZP_03267450.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. H160]
gi|209500915|gb|EEA00953.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. H160]
Length = 183
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ +++G+ FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFAEKVGVDAEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +S N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVTLSVENHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ EH+ + W D + I WP+ P ++ KD L +
Sbjct: 128 SAQFLYKTTDYWFPEHERSIIWNDPDVGIEWPI--DFEPLLAAKDAAGKRLADAE 180
>gi|66048160|ref|YP_238001.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
syringae B728a]
gi|63258867|gb|AAY39963.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
syringae B728a]
Length = 181
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F +++++K + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNAKAFQAATGLTREFVQDNHSRSQQ-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W P++S KDQ L + D
Sbjct: 125 EHAEFLYKTTDYYTPSAERCIAWDDADLAIDWQFDG--QPNLSAKDQQGKRLKEAD 178
>gi|330951118|gb|EGH51378.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae Cit 7]
Length = 181
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K +E G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVIVFEPKVFGDDRGFFFESFNQKAFEEAVGRSVTFVQDNHSRS-VKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G +FD+AVD+R++SPT+G WV L ++A N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ EH+ +AW D ++ I WP PS+S KDQ +
Sbjct: 124 SESAEFLYKTTDYWAPEHERSLAWNDTTVGIDWPF--GEAPSLSAKDQKAVVFEDAE 178
>gi|218134416|ref|ZP_03463220.1| hypothetical protein BACPEC_02319 [Bacteroides pectinophilus ATCC
43243]
gi|217989801|gb|EEC55812.1| hypothetical protein BACPEC_02319 [Bacteroides pectinophilus ATCC
43243]
Length = 183
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 77/171 (45%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++++ F D+RG+F +TY+ E G+ FVQDN S S G +RGLHFQ
Sbjct: 11 IEGLKVIEPAVFGDNRGYFMETYNYNDFAEAGIDCKFVQDNQSASKK-GVLRGLHFQI-N 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVDIR+ SPTYG W + +SA N Q +IP FAHGF+ L
Sbjct: 69 YPQDKLVRVVNGEVFDVAVDIRKGSPTYGQWFGVVLSAENKKQFFIPKDFAHGFLVLSDY 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E YKVTDFY + G+ W DK I I WP+ + + SEKD P +
Sbjct: 129 AEFCYKVTDFYHPNDEGGIIWDDKDIGIEWPVPEGMELIFSEKDTKWPGIK 179
>gi|42780410|ref|NP_977657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 10987]
gi|42736329|gb|AAS40265.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 10987]
Length = 181
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDGRGFFTESYNKKVLETLGITYSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSANHDSGVLWNDKDLAIPWPV---TSPILSDKDRILPSLQECEDSF 181
>gi|153829546|ref|ZP_01982213.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae 623-39]
gi|29725982|gb|AAO88916.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
gi|148874942|gb|EDL73077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae 623-39]
Length = 181
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D I I WP +P S KD L +
Sbjct: 125 SDEAEFVYKCTDYYNPTAEISLRWDDPDIGIEWP--SDEVPIRSLKDSMGKKLKDV 178
>gi|325141237|gb|EGC63736.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis CU385]
gi|325199304|gb|ADY94759.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
H44/76]
Length = 179
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L++
Sbjct: 126 AEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLSEA 176
>gi|121606377|ref|YP_983706.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaromonas naphthalenivorans
CJ2]
gi|120595346|gb|ABM38785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaromonas naphthalenivorans
CJ2]
Length = 181
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ R F D+RG+F ++++ K + G FVQDNHS S G +RGLH+Q
Sbjct: 8 IADVLIIEPRVFGDARGFFYESFNQKAFNDATGTDHQFVQDNHSRSVK-GVMRGLHYQ-V 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR G +FD+AVDIR++SPT+G WV +E+S +N Q+++P GFAHGF+
Sbjct: 66 QQPQGKLVRVARGAVFDVAVDIRKSSPTFGKWVGVELSEDNHRQLWVPPGFAHGFVVTSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT--ILPSVSEKDQNLPFLNQI 175
+ + +YK TD+Y+ E + +AW D I I WPL P +S KD L++
Sbjct: 126 SADFLYKTTDYYAPEFERCIAWNDSVIGIQWPLAPHGIAQPVLSAKDLQGKSLSEA 181
>gi|255282133|ref|ZP_05346688.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bryantella formatexigens DSM
14469]
gi|255267452|gb|EET60657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bryantella formatexigens DSM
14469]
Length = 186
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++++ F D RG+F +TY+ K G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLKVITPAVFGDERGYFMETYNYNDYKAAGIDMEFVQDNQSASKK-GVLRGLHFQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR ++G +FD+AVD+R S TYG W +SA N Q +IP FAHGF+ L
Sbjct: 68 NFPQDKLVRVVSGEVFDVAVDLRPGSATYGKWHGEILSAENKKQFFIPKNFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TDFY + G+ W D I + WP+ + + ++SEKD+ + +
Sbjct: 128 YAEFAYKCTDFYHPNDEGGLMWNDPDIGVAWPIQEGMELTISEKDRKWGGIRE 180
>gi|75909560|ref|YP_323856.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anabaena variabilis ATCC
29413]
gi|75703285|gb|ABA22961.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anabaena variabilis ATCC
29413]
Length = 181
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 8/182 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ + +L+ + F DSRG+F ++Y+ + +LG+ FVQDNHSFS +RGLH+Q
Sbjct: 7 EISDILLLEPQVFTDSRGFFFESYNQQNFTDKLGITVNFVQDNHSFSQH-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR I G IFD+AVDIR++SPT+G WV E+SA N Q++IP GFAHGF+ L
Sbjct: 66 IQ-PQGKLVRAIVGTIFDVAVDIRKSSPTFGQWVGYELSAENKRQLWIPPGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EV+YK TD+Y+ D + W D + I WPL + P +S KD L +
Sbjct: 125 EVAEVVYKTTDYYAPGGDRTILWNDPDLAINWPLKEP--PILSAKDSQGQPLKSAE---V 179
Query: 181 YD 182
Y+
Sbjct: 180 YE 181
>gi|182416967|ref|ZP_02948348.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium butyricum 5521]
gi|237666125|ref|ZP_04526112.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182379143|gb|EDT76645.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium butyricum 5521]
gi|237658215|gb|EEP55768.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 183
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 116/181 (64%), Gaps = 5/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ + F D RGWF +TYS+ +K + FVQDN S+S G +RG+HFQ
Sbjct: 7 ELDGVYIVEPQVFGDERGWFMETYSA--IKTPEIACNFVQDNQSYSKGKGILRGIHFQNG 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVRC+ G + D+AVD+R+ SPTY WV++E+SA N Q++IP GF HGF+TL
Sbjct: 65 EHAQAKLVRCVKGAVLDVAVDLRKGSPTYKKWVAVELSAENKKQLFIPRGFGHGFVTLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ E +YK ++Y+ E+D + + D I + W + + P +SEKD+ P L D F Y
Sbjct: 125 DVEFVYKTDNYYNYENDRSIKFDDPEIGVEWGIKN---PILSEKDKKAPLLIDSDCTFVY 181
Query: 182 D 182
+
Sbjct: 182 E 182
>gi|221213794|ref|ZP_03586768.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) (dTDP-L-rhamnose synthetase)
[Burkholderia multivorans CGD1]
gi|221166583|gb|EED99055.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) (dTDP-L-rhamnose synthetase)
[Burkholderia multivorans CGD1]
Length = 183
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 112/175 (64%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F +++++K E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAKEFVEYIEPGVEFVQDNHSRSSK-GVLRGLHYQ-L 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KL+R IAG + D++VDIRR+SPT+G WV++ +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QRPQGKLLRVIAGEVLDVSVDIRRSSPTFGRWVAVNVSADNKRQVWVPRGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD++ EH+ +AW D + I WPL PS+S KD P L +
Sbjct: 128 YAEVLYKTTDYWYPEHERQIAWNDPELGIEWPL--DAPPSLSAKDAAAPLLVNAE 180
>gi|255068254|ref|ZP_05320109.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria sicca ATCC 29256]
gi|255047524|gb|EET42988.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria sicca ATCC 29256]
Length = 179
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPEVKLLEPQVFGDARGFFMETFRDEWFKANVCDRTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G W +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWAGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 126 AEFVYKCTDYYNPKAEHSLIWNDPTVGIEWPLQGE--PNLSPKDLAGKILAEA 176
>gi|240140508|ref|YP_002964988.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
AM1]
gi|240010485|gb|ACS41711.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
AM1]
Length = 183
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++ D RGWFS+ Y + +L E G+ + FVQDN SFS GTIRGLHFQ
Sbjct: 7 EIPAVKRVIPKRHGDDRGWFSEVYRADILSEHGIANAFVQDNQSFSAPAGTIRGLHFQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R +AG I D+AVD+R +SPTYG V++ + A G Q+++P GFAHGF TLE
Sbjct: 67 PNAQAKLIRVLAGAILDVAVDLRSDSPTYGRHVAVRLDATGGEQLFVPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T V YKV +YS D + W D +I I WP+ + +S KD+ P L + F
Sbjct: 127 ETMVAYKVDAYYSPADDRNLRWNDPAIGIEWPVAEAGA-ILSGKDKAAPLLADLGRVF 183
>gi|49477139|ref|YP_035453.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49328695|gb|AAT59341.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 181
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F++ Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFTEIYNKKVLETLGVTYSFVQDNVSYSTEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGVLWNDKELAIPWPV---TSPILSDKDRILPLLQECEDSF 181
>gi|298485660|ref|ZP_07003739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298159686|gb|EFI00728.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 181
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 111/177 (62%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K +E +G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVIVFEPKVFGDDRGFFFESFNQKAFEEVVGRPVTFVQDNHSRS-VKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR AG +FD+AVD+R++SPT+G WV L ++A N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVTAGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ EH+ +AW D ++ I WP + PS+S KDQ +
Sbjct: 124 SESAEFLYKTTDYWAPEHERSLAWNDVTVGIDWPFSE--APSLSAKDQKAVVFEDAE 178
>gi|115503048|gb|ABI98972.1| RmlC [Escherichia coli]
Length = 177
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 80/172 (46%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ + +G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEVAVGRKVEFVQDNHSKS-RKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y E D G+ W DK I++ WP +S KD+ LP L
Sbjct: 126 ETAEFLYKTTNYYHPESDRGIIWDDKFINVEWP--PYENYILSAKDKTLPPL 175
>gi|116749695|ref|YP_846382.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Syntrophobacter fumaroxidans
MPOB]
gi|116698759|gb|ABK17947.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Syntrophobacter fumaroxidans
MPOB]
Length = 184
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/195 (42%), Positives = 115/195 (58%), Gaps = 18/195 (9%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ + +L+ R F DSRG+F ++Y+ L++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 8 DLPGLLVLEPRVFGDSRGFFFESYNQNTLRQWGIVLPFVQDNHSGSRK-GVLRGLHYQ-V 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KL+R +AG +FD+AVD+R SP +G W + +SA QIYIP GFAHGF+T+
Sbjct: 66 GHAQGKLIRVVAGEVFDVAVDLRTKSPAFGRWFGMILSAAERKQIYIPPGFAHGFLTVSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
EV+YK TDFY+ E + + W D I I WPL P++S KD
Sbjct: 126 WAEVLYKTTDFYAPECERCIIWNDPDIGIDWPL--ECPPTLSSKDS-------------- 169
Query: 182 DGLPLLSLNMERDLL 196
+GLPL + DL
Sbjct: 170 EGLPLSKADRYEDLF 184
>gi|330900904|gb|EGH32323.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330939472|gb|EGH42817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330980590|gb|EGH78693.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 181
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F +++++K + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNAKAFQAATGLTREFVQDNHSRSQR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W P++S KDQ L + D
Sbjct: 125 EHAEFLYKTTDYYTPSAERCIAWDDADLAIDWQFDG--QPNLSAKDQQGKRLKEAD 178
>gi|326336356|ref|ZP_08202527.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691530|gb|EGD33498.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 188
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 3/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + F D RG+F +++S K E FVQDN S S G +RGLHFQR P
Sbjct: 8 IEGVVIIEPKVFPDERGYFFESFSQKKFVENICNTTFVQDNESKSSY-GVLRGLHFQRAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q+KLVR + G ++DIAVDIR+ SPT+G ++ +E++ N Q++IP GFAHGF+ L
Sbjct: 67 YTQSKLVRVVQGVVWDIAVDIRKGSPTFGKYIGVELTEENKRQLFIPRGFAHGFVVLSPE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK FY+ H+ GV W D I I W + + +S+KD++ P L+++ F+Y
Sbjct: 127 AIFQYKCDAFYAPTHEGGVLWNDPEIGIDWRIPPQDI-ILSQKDEHNPLLHEV-WEFDYK 184
Query: 183 G 183
Sbjct: 185 E 185
>gi|225863169|ref|YP_002748547.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 03BB102]
gi|229183519|ref|ZP_04310743.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BGSC 6E1]
gi|225790174|gb|ACO30391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 03BB102]
gi|228599929|gb|EEK57525.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BGSC 6E1]
Length = 181
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDDRGFFTESYNKKVLETLGVTHSFVQDNVSYSAEAGTIRGLHFQKSPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGVLWNDKELAIPWPV---TSPILSDKDRILPLLQECEDSF 181
>gi|30261324|ref|NP_843701.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str. Ames]
gi|47526494|ref|YP_017843.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184156|ref|YP_027408.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
Sterne]
gi|65318592|ref|ZP_00391551.1| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Bacillus anthracis str. A2012]
gi|118476792|ref|YP_893943.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis str.
Al Hakam]
gi|165872831|ref|ZP_02217457.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0488]
gi|167636119|ref|ZP_02394424.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0442]
gi|167641195|ref|ZP_02399449.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0193]
gi|170686788|ref|ZP_02878008.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0465]
gi|170708891|ref|ZP_02899325.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0389]
gi|177654415|ref|ZP_02936312.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0174]
gi|196036175|ref|ZP_03103574.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus W]
gi|196037366|ref|ZP_03104677.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus NVH0597-99]
gi|196044277|ref|ZP_03111513.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 03BB108]
gi|218902415|ref|YP_002450249.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH820]
gi|227815935|ref|YP_002815944.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str. CDC
684]
gi|228913891|ref|ZP_04077516.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228926356|ref|ZP_04089428.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228932594|ref|ZP_04095473.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228944926|ref|ZP_04107287.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229120841|ref|ZP_04250083.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 95/8201]
gi|229599940|ref|YP_002865745.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0248]
gi|254682614|ref|ZP_05146475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
CNEVA-9066]
gi|254725412|ref|ZP_05187194.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A1055]
gi|254734032|ref|ZP_05191746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
Western North America USA6153]
gi|254740821|ref|ZP_05198510.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
Kruger B]
gi|254753664|ref|ZP_05205700.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
Vollum]
gi|254758761|ref|ZP_05210788.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
Australia 94]
gi|301052860|ref|YP_003791071.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis CI]
gi|30255178|gb|AAP25187.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str. Ames]
gi|47501642|gb|AAT30318.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178083|gb|AAT53459.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
Sterne]
gi|118416017|gb|ABK84436.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis str.
Al Hakam]
gi|164711408|gb|EDR16959.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0488]
gi|167510836|gb|EDR86228.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0193]
gi|167528473|gb|EDR91238.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0442]
gi|170126207|gb|EDS95100.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0389]
gi|170669311|gb|EDT20054.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0465]
gi|172080699|gb|EDT65781.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0174]
gi|195991150|gb|EDX55119.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus W]
gi|196024916|gb|EDX63587.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 03BB108]
gi|196031608|gb|EDX70204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus NVH0597-99]
gi|218537776|gb|ACK90174.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH820]
gi|227007473|gb|ACP17216.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str. CDC
684]
gi|228662501|gb|EEL18099.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 95/8201]
gi|228814595|gb|EEM60855.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228827063|gb|EEM72818.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228833180|gb|EEM78745.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228845830|gb|EEM90856.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229264348|gb|ACQ45985.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis str.
A0248]
gi|300375029|gb|ADK03933.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus biovar
anthracis str. CI]
Length = 181
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDDRGFFTESYNKKVLETLGVTHSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGVLWNDKELAIPWPV---TSPILSDKDRILPLLQECEDSF 181
>gi|209883703|ref|YP_002287560.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oligotropha carboxidovorans
OM5]
gi|209871899|gb|ACI91695.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oligotropha carboxidovorans
OM5]
Length = 181
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +++ + F D+RG+F ++++++ +E FVQDN S S G +RGLH+Q
Sbjct: 8 LDGVVVIEPQVFTDARGYFFESFNAERFRERVARDVTFVQDNQSLSRK-GVVRGLHYQIA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR +AG IFD+AVDIR+ S +G W +SA N Q+++P G+AHGF L
Sbjct: 67 PKAQGKLVRALAGEIFDVAVDIRKGSKQFGQWFGTILSAENKKQLWVPEGYAHGFQVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TDF+S H+ + W D ++ I WPL + VS KD P L
Sbjct: 127 TAEVLYKTTDFWSAAHERAIRWDDPTLAIDWPLKEGC--IVSGKDGEAPLLADA 178
>gi|304310335|ref|YP_003809933.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium HdN1]
gi|301796068|emb|CBL44272.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium HdN1]
Length = 181
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 113/177 (63%), Gaps = 5/177 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ R F DSRG+F ++Y++ +EL GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPEVLILEPRVFGDSRGFFYESYNAARFRELTGLTVDFVQDNHSRSGR-GVLRGLHYQ-V 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G ++D+AVD+RR+SP++G WV +E+S N +++IP GFAHGF+ L
Sbjct: 66 QQPQGKLVRVVRGSVWDVAVDVRRSSPSFGRWVGVELSEENQKEMWIPPGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ + +YK TD+Y+ +H+ + W D+ + + W P +SEKD+ L + + P
Sbjct: 126 SADFLYKTTDYYAPQHERCIVWDDRDLGVNWMYEGD--PILSEKDKAGASLKEAELP 180
>gi|261868367|ref|YP_003256289.1| hypothetical protein D11S_1707 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413699|gb|ACX83070.1| hypothetical protein D11S_1707 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 180
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + +E FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLELQVFGDERGFFMETFRDEWFRENVADHTFVQENHSKSIK-GVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G +FD+AVD+R+NSPT G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVSGAVFDVAVDMRKNSPTLGQWVGEILSAENKRQLWVPEGFAHGFYVLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + + W D+++ I WPL PS+S KD L
Sbjct: 125 EAEFTYKCTDYYNPKAEHSLIWNDETVGIEWPLEGE--PSLSAKDLAGKVLKDA 176
>gi|330887883|gb|EGH20544.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv. mori
str. 301020]
Length = 286
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + F D RG+F ++++ ++ + + FVQDNHS S G +RG+H+Q
Sbjct: 96 LAIPDVILFTPKVFGDERGFFYESFNQQVFDSAVNRKVNFVQDNHSKSAG-GVVRGMHYQ 154
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR I G +FD+AVD+RR+SP +G WV +S N Q+++P GFAHGF+ L
Sbjct: 155 IQN-PQGKLVRVIKGEVFDVAVDLRRDSPFFGKWVGEYLSEENKKQLWVPEGFAHGFIVL 213
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ E +YK T++Y + + W D I I WP L + P++S KDQN +Q++
Sbjct: 214 SDSAEFLYKTTNYYDPRSERSLRWDDADIGIKWPAL-STQPTLSVKDQNALPFSQLE--- 269
Query: 180 EYDGLPLLS 188
++ LL
Sbjct: 270 YFEDSSLLP 278
>gi|34499468|ref|NP_903683.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Chromobacterium violaceum
ATCC 12472]
gi|34105320|gb|AAQ61675.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Chromobacterium violaceum
ATCC 12472]
Length = 180
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V+I++ + F D RG+F ++++ + ++ G FVQDNHS S +RGLH+Q
Sbjct: 7 EISAVKIIEPQIFGDERGFFFESFNQQRFEQAVGHAVDFVQDNHSRS-GKNVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ Q KLVR ++G +FD+AVDIR S T+G WV +E+SA N Q++IP GFAHGF+TL
Sbjct: 66 DPHPQGKLVRVVSGAVFDVAVDIRPGSETFGQWVGVELSAANKRQLWIPAGFAHGFLTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ E +YK TD++ E + +AW D + I WPL D P++S KDQ +
Sbjct: 126 DDVEFLYKTTDYWHPELERTLAWDDPDLAIAWPLSD--APTLSAKDQTGASFS 176
>gi|288816245|gb|ADC54965.1| RmlC [Escherichia coli]
Length = 183
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLHFQ
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+ QAKLVRCI G +FD+AVDIR NS T+G WV + +S+ N Q++IP GFAHGF+TL
Sbjct: 66 PPFEQAKLVRCIVGEVFDVAVDIRPNSETFGSWVGVTLSSENKRQLWIPEGFAHGFLTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK ++YS H+ GV W D+ I+I WP +S+KD NLP
Sbjct: 126 EIAEFVYKTNNYYSSNHERGVIWNDEEINIAWPSQSEK--ILSQKDINLPSFR 176
>gi|9957848|gb|AAG09525.1|AF279621_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 176
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 81/171 (47%), Positives = 114/171 (66%), Gaps = 5/171 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFSDERGFFMESFNQKVFEEAVGPKIEFVQDNHSKS-TKGVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCIAG +FD+AVDIR++S T+G WV + +S+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCIAGEVFDVAVDIRKDSETFGKWVGVNLSSENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
E +YK +++YS EH+ G+ W D I+ITW + P +S KD+N P
Sbjct: 126 EEAEFVYKTSNYYSAEHERGIIWNDTDINITWGI---GSPILSLKDKNSPR 173
>gi|261365976|ref|ZP_05978859.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria mucosa ATCC 25996]
gi|288565437|gb|EFC86997.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria mucosa ATCC 25996]
Length = 179
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLEPQVFGDARGFFMETFRDEWFKANVCDRTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G W +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWAGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 126 AEFVYKCTDYYNPKAEHSLIWNDPTVGIEWPLQGE--PNLSPKDLAGKILAEA 176
>gi|54873720|gb|AAV41069.1| RmlC [Shigella boydii]
gi|72003794|gb|AAZ65834.1| putative protein [Escherichia coli]
gi|115503038|gb|ABI98963.1| RmlC [Escherichia coli]
gi|332343819|gb|AEE57153.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC [Escherichia coli UMNK88]
Length = 181
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 81/167 (48%), Positives = 112/167 (67%), Gaps = 4/167 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ 167
E +YK T++Y + GV W D IDI WPL+ + P +SEKD+
Sbjct: 126 ETAEFLYKTTNYYHPISERGVKWDDPCIDIKWPLVSS--PLLSEKDK 170
>gi|189500840|ref|YP_001960310.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
BS1]
gi|189496281|gb|ACE04829.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
BS1]
Length = 197
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 3/193 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V + + D RG+F +++ +++E + FVQDN S S G +RGLHFQ+P
Sbjct: 7 SIPDVLEFVPKIYGDERGYFFESFRKDIVEEHVGKVDFVQDNQSKSGY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q+KLVR I G + D+AVDIR SP YG +V++++ + +++P GFAHGF+ L
Sbjct: 66 PFTQSKLVRVIEGSVLDVAVDIREGSPWYGQYVAVKLDSQTNNMLWVPQGFAHGFIVLSK 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK ++Y+ E+D+G+ W D I I W + + + VSEKD PFL F Y
Sbjct: 126 EAIFSYKCDNYYAPEYDAGIKWNDPDIGIDWGIAEEQV-QVSEKDAGQPFLKDA-FHFSY 183
Query: 182 DGLPLLSLNMERD 194
+ + RD
Sbjct: 184 NDFKKEKVYHRRD 196
>gi|255691874|ref|ZP_05415549.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides finegoldii DSM
17565]
gi|260622427|gb|EEX45298.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides finegoldii DSM
17565]
Length = 182
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D RG+F + + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFSDERGYFMEAFKKEEFEANIGPVDFVQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKLVR I G + D+AVD+RR+SPT+G V + +S N Q +IP GFAHGF L
Sbjct: 66 EHSQAKLVRVIKGEVLDVAVDLRRSSPTFGKHVCVLLSEENKRQFFIPRGFAHGFAVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D ++ I WPL ++ + +S KD+
Sbjct: 126 EAIFTYKVDNKYAPQSEASIIYNDATLGIDWPLAESQM-LLSPKDKEGMAFKDA 178
>gi|218530621|ref|YP_002421437.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
chloromethanicum CM4]
gi|218522924|gb|ACK83509.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
chloromethanicum CM4]
Length = 183
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 85/178 (47%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++ D RGWFS+ Y + LL E G+ + FVQDN SFS GTIRGLHFQ
Sbjct: 7 EIPAVKRVIPKRHGDDRGWFSEVYRADLLAEHGIANAFVQDNQSFSAPAGTIRGLHFQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLVR +AG I D+AVD+R +SPTYG V++ + A G Q+++P GFAHGF TLE
Sbjct: 67 PNAQAKLVRVLAGAILDVAVDLRSDSPTYGRHVAVRLDATGGEQLFVPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T V YKV +YS D + W D +I I WP+ + +S KD+ P L + F
Sbjct: 127 DTMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADA-ILSGKDKAAPLLADLGRVF 183
>gi|218531920|ref|YP_002422736.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
chloromethanicum CM4]
gi|218524223|gb|ACK84808.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
chloromethanicum CM4]
Length = 184
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 85/178 (47%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++ D RGWFS+ Y + LL E G+ + FVQDN SFS GTIRGLHFQ
Sbjct: 8 EIPAVKRVIPKRHGDDRGWFSEVYRADLLAEHGIANAFVQDNQSFSAPAGTIRGLHFQVA 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLVR +AG I D+AVD+R +SPTYG V++ + A G Q+++P GFAHGF TLE
Sbjct: 68 PNAQAKLVRVLAGAILDVAVDLRSDSPTYGRHVAVRLDATGGEQLFVPAGFAHGFCTLEP 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T V YKV +YS D + W D +I I WP+ + +S KD+ P L + F
Sbjct: 128 DTMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADA-ILSGKDKAAPLLADLGRVF 184
>gi|332561399|ref|ZP_08415714.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides WS8N]
gi|332274198|gb|EGJ19515.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides WS8N]
Length = 187
Score = 154 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 80/181 (44%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL R F D+RG F + + L+ LG+ FVQDN S S GT+RGLH+Q P
Sbjct: 7 ELPGVLILTPRVFGDARGSFCEAWKRATLQGLGIDLDFVQDNQSISAPVGTVRGLHYQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR G I D+AVD+R SPTYG WV +E++A N Q+ +P GF HGF+T E
Sbjct: 67 PHAQDKLVRVGHGAILDVAVDVRVGSPTYGRWVGVELTAGNARQLLVPKGFLHGFVTREP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T V+YK TD Y+ + D V + D + I W + D +S+KD P SPF
Sbjct: 127 DTVVLYKTTDVYAPDCDGAVHFADPDLGIDWGI-DPASAVLSDKDARAPRFADWTSPFSI 185
Query: 182 D 182
+
Sbjct: 186 E 186
>gi|229090264|ref|ZP_04221509.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-42]
gi|228693044|gb|EEL46760.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock3-42]
Length = 181
Score = 154 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDDRGFFTESYNKKVLETLGVTHSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKRWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGVLWNDKELAIPWPV---TSPILSDKDRILPLLQECEDSF 181
>gi|227887091|ref|ZP_04004896.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli 83972]
gi|227835441|gb|EEJ45907.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli 83972]
gi|297499073|gb|ADI43259.1| RmlC [Escherichia coli]
gi|307554110|gb|ADN46885.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli ABU 83972]
Length = 180
Score = 154 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLILEPEVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-IKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++S T+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSGTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV+YK +Y+ H+ + W D ++I WP T L ++S+KD N L
Sbjct: 126 DLAEVLYKTNQYYAPSHERNIIWNDPLLNIKWP--RTALITLSDKDANGEKLE 176
>gi|197333915|ref|YP_002154931.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio fischeri MJ11]
gi|197315405|gb|ACH64852.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio fischeri MJ11]
Length = 189
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 6/175 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVKIIEPSVFGDERGFFMETWNQKQFEELVTGKLTQFVQDNHSKSKK-GILRGLHYQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR I+G +FD+AVDIR+ SPT+G W+ +SA N Q++IP GFAHGF
Sbjct: 67 ENT-QGKLVRVISGEVFDVAVDIRKGSPTFGQWIGEYLSAENKRQLWIPEGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D +++I WPL +LPS+S KD+ N +
Sbjct: 126 EEAEFVYKCTDYYNPTAEVSIKWDDPTVNIEWPLK--MLPSLSNKDKKAKMFNDV 178
>gi|288559367|ref|YP_003422853.1| dTDP-4-dehydrorhamnose 3,5- epimerase RfbC1 [Methanobrevibacter
ruminantium M1]
gi|288542077|gb|ADC45961.1| dTDP-4-dehydrorhamnose 3,5- epimerase RfbC1 [Methanobrevibacter
ruminantium M1]
Length = 192
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 78/184 (42%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V ++ FED RG+F +TY+ K G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGVFTVEPTVFEDERGYFMETYNENDFKAEGIDLTFVQDNQSKSSK-GVLRGLHFQYT 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G +FD+ VD+R++SPTYG W+ +S N Q++IP GFAHGF+ L
Sbjct: 69 Q-PQGKLVRVIKGEVFDVGVDLRKDSPTYGKWMGEILSEENKKQLFIPKGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFLNQIDSPF 179
E +YK TDFY + + G+ W D I I WPL D +SEKD+ L + + F
Sbjct: 128 EAEFVYKCTDFYKGDDEGGIQWNDPDIGIEWPLGDLKEEDLILSEKDKLLKPMKDTPTDF 187
Query: 180 EYDG 183
+
Sbjct: 188 YMED 191
>gi|78188492|ref|YP_378830.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Chlorobium
chlorochromatii CaD3]
gi|78170691|gb|ABB27787.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium chlorochromatii
CaD3]
Length = 197
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 108/180 (60%), Gaps = 3/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V +L+ + F D RG+F +++ +++E Q FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IPEVLMLEPKVFGDERGYFFESFRQDVIEEHIGQVHFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q+KLVR + G++ D+AVD+R SPT+G ++ + + +++P GFAHGF+ L
Sbjct: 67 YTQSKLVRALFGKVLDVAVDVRHGSPTFGQHITCLLDSERKNMLWVPKGFAHGFVVLSPE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK ++Y+ HD+G+AW D ++ I W L +S KD P L+ +D F YD
Sbjct: 127 AVFAYKCDNYYTPSHDAGIAWNDPALGIDWQLP-LADVRLSSKDAAQPSLSSVDC-FPYD 184
>gi|15676014|ref|NP_273144.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Neisseria meningitidis
MC58]
gi|7225299|gb|AAF40545.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Neisseria meningitidis
MC58]
gi|316985927|gb|EFV64866.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
H44/76]
Length = 184
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L++
Sbjct: 131 AEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLSEA 181
>gi|12232611|gb|AAG49406.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Aggregatibacter
actinomycetemcomitans]
Length = 180
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + ++ FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLEPQVFGDERGFFMETFRDEWFRKNVADRTFVQENHSKS-IKGVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I+G +FD+AVD+R NS T+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVISGAVFDVAVDMRGNSLTFGQWVGEILSAENKHQLWVPEGFAHGFYVLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + ++W D+++ I WPL PS+S KD L +
Sbjct: 125 EAEFTYKCTDYYNPKAEHSLSWNDETVGIEWPL--YGKPSLSAKDLGGKMLAEA 176
>gi|300853735|ref|YP_003778719.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium ljungdahlii DSM
13528]
gi|300433850|gb|ADK13617.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium ljungdahlii DSM
13528]
Length = 185
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++T F D+RG+F +TY+ K GL VFVQDN S S G +RGLHFQ
Sbjct: 13 EIKGVYVIETGIFGDNRGYFMETYNYNEFKASGLDMVFVQDNQSKSKK-GVLRGLHFQ-K 70
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+Q KLVR + G++FD+AVD+R S TYG WV + +S N Q YIP GFAHGF+ L
Sbjct: 71 NYSQGKLVRVVKGKVFDVAVDLRDGSSTYGKWVGVTLSEENKKQFYIPKGFAHGFLVLSD 130
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E YK T+FY E + G+ W D I+I WPL SEKD+ P L +
Sbjct: 131 EAEFCYKCTEFYHPEDEGGIIWNDTDINIKWPLEGIDNIIFSEKDKLWPTLKEYK 185
>gi|9957853|gb|AAG09529.1|AF279622_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 177
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 82/172 (47%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ + +E G + FV DNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFSDERGFFMESFNQTVFEEAVGRKIEFVLDNHSKS-TKGVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCIAG +FD+AVDIR++S T+G W+ + +S+ N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCIAGEVFDVAVDIRKDSETFGKWIGVNLSSENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T+FY+ D GVAW D I I WPL++ P +S+KD PFL
Sbjct: 126 EEAEFLYKTTNFYNPRSDRGVAWNDPYIGINWPLVNN--PLLSDKDSKQPFL 175
>gi|331004824|ref|ZP_08328242.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium
IMCC1989]
gi|330421355|gb|EGG95603.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium
IMCC1989]
Length = 180
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V +++ F D RG+F +T+ K +E G FVQDNHS S G +RGLHFQ+
Sbjct: 7 KLSGVLVIEPAVFGDERGFFLETFQLKRYQEHLGENIQFVQDNHSRSPR-GVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G ++D+AVDI +S TYG + + +SA N Q++IP G+AHGF+ L
Sbjct: 66 TK-PQGKLVRVVTGEVYDVAVDINPHSSTYGQYEGVVLSAKNKKQLWIPPGYAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ + YK TD+Y + GV W D I+I WPL D +S+KD LPFL I S
Sbjct: 125 DSADFEYKCTDYYDPADEGGVMWNDPEINIPWPLTD---VQLSDKDTMLPFLKDIKS 178
>gi|171316144|ref|ZP_02905369.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria MEX-5]
gi|171098748|gb|EDT43542.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria MEX-5]
Length = 190
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ F D+RG+F ++Y L++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 9 LPGVLLIEPASFGDARGFFVESYRESWLRDAGVDARFVQDNHSRSRR-GVLRGLHYQF-R 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR G ++D+AVDIR SP G W + + Q++IP GFAHGF L
Sbjct: 67 HPQGKLVRVSRGAVYDVAVDIRPGSPHLGHWFGTVLDDVSHRQLWIPPGFAHGFCVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ YK T +Y D+GV W D I I WP LD + +S+KD+ P L
Sbjct: 127 ADFAYKCTAYYDPSSDAGVLWDDPDIGIEWPALD-VPFELSDKDRRQPRLRD 177
>gi|325135201|gb|EGC57826.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M13399]
gi|325205184|gb|ADZ00637.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M04-240196]
Length = 179
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E+ YK TD+Y E + + W D +I I WPL P++S KD L +
Sbjct: 126 AELTYKCTDYYKPEAEQVLIWNDPAIGIDWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|315649938|ref|ZP_07903018.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium saburreum DSM
3986]
gi|315487708|gb|EFU78011.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium saburreum DSM
3986]
Length = 183
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 99/173 (57%), Gaps = 3/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + ++ F+D RG+F +TY+ E GL FVQDN S S G +RGLHFQ
Sbjct: 10 DIEGLCVITPTVFKDDRGYFVETYNKNDFAEAGLNMEFVQDNQSKSSK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR ++G ++D+AVD+R++S TYG + + +S N Q YIP GFAHGF L
Sbjct: 68 EHPQGKLVRVLSGEVYDVAVDLRKDSKTYGKYFGVILSDENKKQFYIPEGFAHGFAVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK TDFY + G+ + D I I WP+ + + +S+KD L +
Sbjct: 128 EAVFAYKCTDFYHPNDEGGLKYDDPDIGIDWPI-EGLKLIMSDKDTKWKGLKE 179
>gi|288926984|ref|ZP_06420879.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella buccae D17]
gi|315608741|ref|ZP_07883719.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella buccae ATCC 33574]
gi|288336230|gb|EFC74616.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella buccae D17]
gi|315249591|gb|EFU29602.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella buccae ATCC 33574]
Length = 182
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+ + FED RG+F + + +E + F+QDN S S G +RGLH+Q
Sbjct: 7 EIKGVWIMTPKVFEDRRGYFFEAWKKAEFEEHVGKVDFIQDNESKSSF-GVLRGLHYQTG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLVR I GR+ D+AVD+R++SPT+G V++E+S N Q +IP GFAHGF+ L
Sbjct: 66 DYAQAKLVRVIKGRVLDVAVDLRKSSPTFGRHVAVELSEENKRQFFIPRGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ +H++G+ W D+ + I WP+ + + S+KD P L +
Sbjct: 126 EAVFTYKVDNAYAPQHEAGIRWDDEQVAIKWPIDPGDVVT-SDKDLKAPALKDAE 179
>gi|148643368|ref|YP_001273881.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanobrevibacter smithii
ATCC 35061]
gi|148552385|gb|ABQ87513.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanobrevibacter smithii
ATCC 35061]
Length = 185
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 103/178 (57%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ + D+RG+F +TY+ K+ G FVQDN S SF G +RGLH Q
Sbjct: 10 DIEGMFVVEPAVYGDNRGYFMETYNENDFKKAGYDLTFVQDNQSQSFK-GVLRGLHLQ-L 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR I G +FD+ VD+R +SPTYG W +SA N Q+YIP FAHGF+ L
Sbjct: 68 KYPQGKLVRVIKGEVFDVGVDLRADSPTYGKWHGEILSAENKKQLYIPPKFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E +YK T+FY E + G+ W D I + WPL ++S+KD+ L + +
Sbjct: 128 EAEFVYKCTEFYHGEDEGGIMWNDPDIAVEWPLEGIDEITLSDKDKKWKSLKESQIKY 185
>gi|239813764|ref|YP_002942674.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Variovorax paradoxus S110]
gi|239800341|gb|ACS17408.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Variovorax paradoxus S110]
Length = 182
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F D+RG+F ++++ K E G FVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVLVIEPKVFGDARGFFYESFNGKAFDEAVGRHVEFVQDNHSRSAK-GVLRGLHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIR++SPT+G WV +E+S +N Q+++P GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVVRGAVFDVAVDIRKSSPTFGKWVGVELSEDNHRQLWVPEGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ H+ + W D + I WP P +S KDQ L Q +
Sbjct: 126 TAEFLYKTTDYYAPAHERCIKWDDAKLGIAWP-SVGAHPQLSAKDQAGAALIQAE 179
>gi|319784647|ref|YP_004144123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170535|gb|ADV14073.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 184
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I+ V + ++ D+RG+F +TY+++ + G+ FVQDNHS+S G +RGLH+Q
Sbjct: 7 LGIDGVLEIVPKRHGDARGFFVETYNAERFSQAGIDLAFVQDNHSYSAAAGVLRGLHYQL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KL+R I G I D+AVDIRR+S T+G WV+LE+SA G QI +P GFAHGF+TL
Sbjct: 67 APRAQDKLLRVIRGSILDVAVDIRRSSKTFGKWVALEVSAEKGNQILVPKGFAHGFVTLV 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+TEV+YKVTD YS HD + + D +I I WP T +S+KD P L +
Sbjct: 127 PDTEVLYKVTDTYSQAHDRSIRFDDPAIGIEWP-SLTGGFQLSDKDLKAPLLAAAE 181
>gi|302186966|ref|ZP_07263639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
syringae 642]
Length = 181
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F +++++K + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNAKAFQAATGLTRDFVQDNHSRSQR-GVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTFGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ + +AW D + I W PS+S KDQ L + D
Sbjct: 125 EHAEFLYKTTDYYTPSAERCIAWDDADLAIDWQFDG--QPSLSAKDQQGKRLKEAD 178
>gi|30019366|ref|NP_830997.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 14579]
gi|228951698|ref|ZP_04113800.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228957591|ref|ZP_04119342.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229043064|ref|ZP_04190794.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH676]
gi|229068875|ref|ZP_04202169.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus F65185]
gi|229126627|ref|ZP_04255639.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-Cer4]
gi|229143928|ref|ZP_04272345.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-ST24]
gi|296501909|ref|YP_003663609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
BMB171]
gi|29894909|gb|AAP08198.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 14579]
gi|228639491|gb|EEK95904.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-ST24]
gi|228656567|gb|EEL12393.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-Cer4]
gi|228714159|gb|EEL66040.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus F65185]
gi|228726305|gb|EEL77532.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH676]
gi|228802090|gb|EEM48956.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228807983|gb|EEM54500.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|296322961|gb|ADH05889.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
BMB171]
Length = 181
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFSESYNKQVLETLGITYSFVQDNVSYSAKAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ D P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKDLAIPWPVTD---PILSDKDQILPLLEEYEDSF 181
>gi|3132257|dbj|BAA28134.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Actinobacillus
actinomycetemcomitans]
Length = 180
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + +E FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLELQVFGDERGFFMETFRDEWFRENVADHTFVQENHSKSIK-GVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G +FD+AVD+R+NSPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVSGAVFDVAVDMRKNSPTFGQWVGEILSAENKRQLWVPEGFAHGFYVLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + + W D+++ I WPL PS+S KD L
Sbjct: 125 EAEFTYKCTDYYNPKAEHSLIWNDETVGIEWPLEGE--PSLSAKDLAGKVLKDA 176
>gi|189424897|ref|YP_001952074.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacter lovleyi SZ]
gi|189421156|gb|ACD95554.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacter lovleyi SZ]
Length = 181
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F D RG+F ++++ ++ ++ GL+ FVQ NHS S +RGLH+Q
Sbjct: 8 LPGVLILEPKVFGDDRGFFFESFNERVWQKATGLKRSFVQHNHSRSAR-NVLRGLHYQI- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR I+G +FD+AVDIRR+SPT G W +SA N Q+++P GFAHGF
Sbjct: 66 QHPQGKLVRVISGEVFDVAVDIRRSSPTCGKWFGTTLSAENKRQMWVPEGFAHGFCVTSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +Y TD+++ E + +AW D +I+I+WPL P +S KD L++ +
Sbjct: 126 HAEFLYLTTDYWAPEFERTIAWDDPAINISWPLCGE--PLLSAKDLAGKPLSEAE 178
>gi|1944162|dbj|BAA19636.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Aggregatibacter
actinomycetemcomitans]
gi|71084099|gb|AAZ23559.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Aggregatibacter
actinomycetemcomitans]
Length = 179
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + ++ +FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLEPQVFGDERGFFMETFRDEWFRKNVADRIFVQENHSKS-IKGVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I+G +FD+AVD+R NS T+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVISGAVFDVAVDMRGNSLTFGQWVGEILSAENKHQLWVPEGFAHGFYVLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TD+Y+ + + + W D++I I WPL PS+S KD L +
Sbjct: 125 EAEFTYKCTDYYNPKAEHSLIWNDETIGIEWPL--YGEPSLSAKDLAGKVLAE 175
>gi|330972799|gb|EGH72865.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 181
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K +E +G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVIVFEPKTFGDDRGFFFESFNQKAFEEVVGRPVKFVQDNHSRS-VKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G +FD+AVD+R++SPT+G WV L ++A N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ EH+ +AW D ++ I WP PS+S KDQ +
Sbjct: 124 SESAEFLYKTTDYWAPEHERSLAWNDATVGIDWPF--GEAPSLSAKDQKAVVFEDAE 178
>gi|228906952|ref|ZP_04070819.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
200]
gi|228852700|gb|EEM97487.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
200]
Length = 181
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFSESYNKQVLETLGITYTFVQDNVSYSAKAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ D P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKDLAIPWPVTD---PILSDKDQILPLLEEYEDSF 181
>gi|256420555|ref|YP_003121208.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chitinophaga pinensis DSM
2588]
gi|256035463|gb|ACU59007.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chitinophaga pinensis DSM
2588]
Length = 188
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + + R F D+RG+F ++YS + + GLQ FVQDN + S G +RGLH+Q+ P
Sbjct: 8 IPDLLVYEPRVFNDNRGYFFESYSEQAFLQQGLQLKFVQDNQARSTY-GVLRGLHYQQEP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR + GRI D+AVDIR+ SPTYG ++E+SA N Q+ +P GFAHG+ L
Sbjct: 67 HAQTKLVRVLEGRIIDVAVDIRKGSPTYGKVFTIELSAENKKQLLVPKGFAHGYSVLSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
EV+YKV +FY + G+ + D +++I W + T VSEKD LP L F Y+
Sbjct: 127 AEVMYKVDNFYHKASEGGIIYNDPALNIDWGISLTDA-LVSEKDVILPTLENCTHNFVYN 185
>gi|172059823|ref|YP_001807475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria
MC40-6]
gi|171992340|gb|ACB63259.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria
MC40-6]
Length = 183
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ + F D+RG+F ++++ + E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKLIEPKVFGDARGYFYESFNGREFAEHIGPGIEFVQDNHSRSAK-GVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIRR+SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRRSSPDFGKWVGVTLSADNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L++ +
Sbjct: 128 AAQFLYKTTDYWYPEHERCIVWDDPEIGIEWPI--DAAPVLAPKDAAGKRLSEAE 180
>gi|218233453|ref|YP_002366001.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus B4264]
gi|229108779|ref|ZP_04238386.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock1-15]
gi|229149524|ref|ZP_04277756.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus m1550]
gi|218161410|gb|ACK61402.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus B4264]
gi|228633870|gb|EEK90467.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus m1550]
gi|228674670|gb|EEL29907.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus Rock1-15]
Length = 181
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFSESYNKQVLETLGITYSFVQDNVSYSAKAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +S +N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSGDNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ D P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKDLAIPWPVTD---PILSDKDQILPLLEEYEDSF 181
>gi|149185655|ref|ZP_01863971.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erythrobacter sp. SD-21]
gi|148830875|gb|EDL49310.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erythrobacter sp. SD-21]
Length = 181
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +++ + F D RG+F +++++ KE+GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLADAVVIEPQVFGDERGFFLESWNNSSFKEVGLNLDFVQDNHSCSSS-GVLRGLHYQ-L 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLVR + G ++D+ VD+RR+SP++G + EISA N +++P GFAHGF+TL
Sbjct: 65 PNPQGKLVRVVRGAVYDVIVDLRRSSPSFGLHEAFEISAANKRILWVPPGFAHGFLTLCD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+T +YK T +Y + + W D + I WPL + P VS+KD+N +
Sbjct: 125 DTHFLYKCTAYYEPSSEHSLVWNDPDLAIDWPLSEG-APDVSDKDRNGITFREAP 178
>gi|190569148|ref|ZP_03022046.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis
Tsiankovskii-I]
gi|190559731|gb|EDV13718.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus anthracis
Tsiankovskii-I]
Length = 181
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDDRGFFTESYNKKVLETLGVTHSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V YKV ++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VRYKVDEYYSADHDSGVLWNDKELAIPWPV---TSPILSDKDRILPLLQECEDSF 181
>gi|281354883|ref|ZP_06241377.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Victivallis vadensis ATCC
BAA-548]
gi|281317763|gb|EFB01783.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Victivallis vadensis ATCC
BAA-548]
Length = 184
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++++ R F DSRG+F + Y L G+ F+QDN SFS G +RGLH+Q PP
Sbjct: 8 IAGVKVIEPRLFGDSRGYFFEAYRKDLFAGAGIDARFIQDNESFSTG-GVLRGLHYQIPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y QAKLVR ++GR+ D+ VDIR SPT+G V++E+S + Q+++P G AHGF L
Sbjct: 67 YTQAKLVRVVSGRVLDVVVDIRLGSPTFGKHVAIELSGESKRQLFLPRGMAHGFAVLSPE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+YK +FY + + + D ++ I W L + +S +D+ + EY
Sbjct: 127 AVFVYKCDNFYCPASERCIRFDDPALGIDWRLPPETV-KLSPRDRRGVLFKDAELFEEY 184
>gi|222445611|ref|ZP_03608126.1| hypothetical protein METSMIALI_01251 [Methanobrevibacter smithii
DSM 2375]
gi|222435176|gb|EEE42341.1| hypothetical protein METSMIALI_01251 [Methanobrevibacter smithii
DSM 2375]
Length = 188
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 103/178 (57%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ + D+RG+F +TY+ K+ G FVQDN S SF G +RGLH Q
Sbjct: 13 DIEGMFVVEPAVYGDNRGYFMETYNENDFKKAGYDLTFVQDNQSQSFK-GVLRGLHLQ-L 70
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR I G +FD+ VD+R +SPTYG W +SA N Q+YIP FAHGF+ L
Sbjct: 71 KYPQGKLVRVIKGEVFDVGVDLRADSPTYGKWHGEILSAENKKQLYIPPKFAHGFVVLSD 130
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E +YK T+FY E + G+ W D I + WPL ++S+KD+ L + +
Sbjct: 131 EAEFVYKCTEFYHGEDEGGIMWNDPDIAVEWPLEGIDEITLSDKDKKWKSLKESQIKY 188
>gi|91774154|ref|YP_566846.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanococcoides burtonii DSM
6242]
gi|91713169|gb|ABE53096.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein
[Methanococcoides burtonii DSM 6242]
Length = 183
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 107/179 (59%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I + ILK + F D RG+F ++Y++++L EL G + FVQDN S S G IRGLH+Q
Sbjct: 7 KIEDLYILKPKVFGDERGYFFESYNARVLDELVGKKYNFVQDNESRS-SYGVIRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PY+Q KLVR I G ++D+ VD+R+ S T+G WV +E+S +N Q IP GFAHGF L
Sbjct: 66 EPYSQTKLVRVIQGTVYDVVVDLRKESCTFGEWVGVELSEDNKKQFLIPKGFAHGFSVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK D+Y+ E + G+ + D +++I W + V++KD+ LP F
Sbjct: 126 ETAIFAYKCDDYYNPESEGGIMYDDPTLNIDWKVKKEDA-IVADKDKELPTFENTKISF 183
>gi|270261089|ref|ZP_06189362.1| hypothetical protein SOD_a03140 [Serratia odorifera 4Rx13]
gi|270044573|gb|EFA17664.1| hypothetical protein SOD_a03140 [Serratia odorifera 4Rx13]
Length = 177
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 102/172 (59%), Gaps = 6/172 (3%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
V++++ + F D RG+F +T+ +E LG+ FVQDNHS S G +RGLHFQ
Sbjct: 10 GVKLIEPKVFGDHRGFFMETFQKDRYQEVLGIDVDFVQDNHSRSSH-GVLRGLHFQTAK- 67
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
Q KLVR + G ++D+ VDIR +SPT+ WV + +S N Q+++P G AHGF+ + +
Sbjct: 68 PQGKLVRVVRGEVYDVVVDIRPDSPTFKKWVGVYLSEENKNQLWVPPGLAHGFVVVSESA 127
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y +++ + W D + I WP+ + P +S KD L ++
Sbjct: 128 DFEYKCTDYYDPSNEACLLWNDPEVGIEWPISE---PLLSPKDLQGKLLREL 176
>gi|21230098|ref|NP_636015.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769911|ref|YP_244673.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
campestris str. 8004]
gi|188993127|ref|YP_001905137.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
campestris str. B100]
gi|14090389|gb|AAK53465.1|AF204145_5 dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
campestris]
gi|21111625|gb|AAM39939.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575243|gb|AAY50653.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734887|emb|CAP53099.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas campestris pv.
campestris]
Length = 185
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDERGQFFETWNAERFGQHGLPTSFVQSNVSTSAR-GVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIR SP +G W ++ +SA N Q++IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDIRAGSPHFGRWTAVLLSAENRRQVWIPEGFAHGFAVLSEK 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y TD Y E D+GV W D +I I WP+ D PS+S KD PFL+++
Sbjct: 126 ALFSYLCTDVYVKEADAGVRWDDAAIGIDWPVSD---PSLSAKDAKAPFLDEVP 176
>gi|284799482|ref|ZP_05984100.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria subflava NJ9703]
gi|284797991|gb|EFC53338.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria subflava NJ9703]
Length = 184
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCDRTFVQENHSKSSK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 131 AEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLTEA 181
>gi|9957858|gb|AAG09533.1|AF279623_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 182
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ F + RG+F ++++ ++ + L + FVQDNHS S +RGLH+Q
Sbjct: 7 EIPDVFILEPLVFVNERGFFMESFNHRVFETLLDTKVNFVQDNHSKS-TKNVVRGLHYQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCI+G ++D+AVD+R S TYGCWV +E+SA N Q++IP GFAHGF+TL
Sbjct: 66 EPYAQGKLVRCISGAVYDVAVDLRSTSQTYGCWVGVELSALNMRQLWIPEGFAHGFLTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
N E +YK T++Y+ E + + + D +DI WP+ + VS+KD+ I
Sbjct: 126 DNVEFLYKTTNYYNKESERCIRYNDPDLDIIWPISNKDNIIVSDKDKKGILFRDIKK 182
>gi|120598288|ref|YP_962862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. W3-18-1]
gi|120558381|gb|ABM24308.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. W3-18-1]
Length = 182
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ R F D RG+F ++++ + + G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKIIEPRVFGDDRGFFFESFNQQQFEAAIGYPVNFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ Q+KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 APHVQSKLVRCVVGEVFDVAVDIRQSSPTFGQWVGVHLSAENKRQLWIPEGFAHGFVTLR 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y D G+ W D+ + + WP+ + ++ ++S+KD+ P + +
Sbjct: 126 ETAEFLYKTTNYYCAASDRGIQWNDEKLAVAWPI-EGLILTLSDKDKRQPIFEKAE 180
>gi|150376856|ref|YP_001313452.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium medicae WSM419]
gi|150031403|gb|ABR63519.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium medicae WSM419]
Length = 187
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 125/181 (69%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ V + RKF D RG+FS+T++++ L G++ FVQDNHS+S GT+RGLH+Q
Sbjct: 7 LSLGGVLEIVPRKFGDERGFFSETFNAETLAAQGVELSFVQDNHSYSALAGTLRGLHYQL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQAKLVR + GR+FD+ VDIR+ SP++ W+ LE+SA QI +P GFAHGF+TLE
Sbjct: 67 PPKAQAKLVRVVRGRVFDVVVDIRKGSPSFAKWLGLELSAERWNQILVPAGFAHGFVTLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
TEV+YKVT+ YS EH+ + + D +I I WP+ L +S KD+N LN+ + FE
Sbjct: 127 PETEVLYKVTEHYSAEHERSIRFDDPAIGIGWPVAADRL-QLSAKDRNAALLNE-SNLFE 184
Query: 181 Y 181
+
Sbjct: 185 F 185
>gi|241763426|ref|ZP_04761480.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax delafieldii 2AN]
gi|241367368|gb|EER61689.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidovorax delafieldii 2AN]
Length = 181
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ + F D+RG+F ++++ + G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVVLIEPKVFGDARGFFYESFNQRDFNAATGTDYQFVQDNHSRSSK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FD+AVDIR++SPT+G WV E+SA+N Q++IP GFAHGF+ L
Sbjct: 65 -VQQPQGKLVRVVHGAVFDVAVDIRKSSPTFGQWVGAELSADNHHQLWIPPGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ EH+ +AW D ++ I W T P++S KD L Q +
Sbjct: 124 SDVAEFLYKTTDYYAPEHERCIAWNDSTLAIDWRFEGT--PNLSVKDAQGRVLVQAE 178
>gi|257792905|gb|ACV67282.1| RmlC [Escherichia coli]
Length = 181
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 114/174 (65%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ + F D RG+F ++++ K+ E G + FVQDNHS S G +RGLH+Q+
Sbjct: 7 EIPDVLILEPKVFGDERGFFMESFNQKVFDEAVGRKVEFVQDNHSKS-IKGVLRGLHYQQ 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIRR+S T+G WV + +SA N Q++IP GFAHGF L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRRDSETFGKWVGVNLSAENKKQLWIPEGFAHGFYVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK T++Y+ D G+ W DK+I+I WP++ I +SEKD N +
Sbjct: 126 DTAEFVYKATNYYNFLSDRGIIWNDKNININWPIVGDI--LLSEKDMNHRTFTE 177
>gi|228920040|ref|ZP_04083389.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839496|gb|EEM84788.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 181
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFSESYNKQVLETLGITYSFVQDNVSYSVKAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ D P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKDLAIPWPVTD---PILSDKDRILPLLEEYEDSF 181
>gi|163803299|ref|ZP_02197178.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio sp. AND4]
gi|159172936|gb|EDP57774.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio sp. AND4]
Length = 182
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 108/174 (62%), Gaps = 5/174 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 9 PDVKIIEPTVFGDERGFFMETWNQKQFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQTE 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G +FD+AVDIR+ SPT+G WV +S N Q+++P GFAHGF
Sbjct: 68 NT-QGKLVRVVSGEVFDVAVDIRKGSPTFGQWVGEYLSGENKRQLWVPEGFAHGFYVTSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D++++I WP+ +T P +S KD+ F +++
Sbjct: 127 EAEFVYKCTDYYNPSAEVSIQWDDEALNIDWPIAET-TPLLSGKDKGGIFFSKV 179
>gi|9957837|gb|AAG09516.1|AF279619_4 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
Length = 181
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 81/174 (46%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + + F D RG+F ++++ ++ + LG + FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVLIFEPKVFGDKRGFFMESFNQRVFDEALGHKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PPYAQ KLVRC+ G +FD+AVDIR++S T+G WV + +SA+N Q++IP GFAHGF L
Sbjct: 66 PPYAQGKLVRCVVGEVFDVAVDIRKDSETFGKWVGVNLSADNKKQLWIPEGFAHGFYVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E++YK T++Y++ D G+ W D+SI+I WP+ I +SEKD N L +
Sbjct: 126 ETAELLYKTTNYYNLLSDRGIIWNDRSININWPISGDI--LLSEKDMNHGTLTE 177
>gi|1073093|pir||D49906 rfbD homolog - Xanthomonas campestris pv. campestris
Length = 183
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 6 LPGCVVIEPAVFGDERGQFFETWNAERFGQHGLPTSFVQSNVSTSAR-GVLRGLHYQWPR 64
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIR SP +G W ++ +SA N Q++IP GFAHGF L
Sbjct: 65 -PQGKLVSVLEGEVYDVAVDIRAGSPHFGRWTAVLLSAENRRQVWIPEGFAHGFAVLSEK 123
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y TD Y E D+GV W D +I I WP+ D PS+S KD PFL+++
Sbjct: 124 ALFSYLCTDVYVKEADAGVRWDDAAIGIDWPVSD---PSLSAKDAKAPFLDEVP 174
>gi|213967238|ref|ZP_03395387.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato T1]
gi|301381026|ref|ZP_07229444.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato Max13]
gi|302059365|ref|ZP_07250906.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato K40]
gi|302134882|ref|ZP_07260872.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213928080|gb|EEB61626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato T1]
Length = 181
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 111/177 (62%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K +E+ G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVIVFEPKTFGDDRGFFFESFNQKAFEEVVGRPVKFVQDNHSRSVK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G +FD+AVD+R++SPT+G WV L ++A N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGFIVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ EH+ +AW D ++ I WP +T PS+S KDQ +
Sbjct: 124 SESAEFLYKTTDYWAPEHERSLAWNDATVGIEWPFSET--PSLSAKDQKAVAFEDAE 178
>gi|50083371|ref|YP_044881.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Acinetobacter sp.
ADP1]
gi|49529347|emb|CAG67059.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Acinetobacter sp.
ADP1]
Length = 187
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/181 (45%), Positives = 119/181 (65%), Gaps = 6/181 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK----ELGLQD-VFVQDNHSFSFDCGTIRGL 56
I + I + R F D RGWF ++++ ++ + E GL FVQDNHSFS G +RGL
Sbjct: 7 KIKDLLIFEPRVFGDDRGWFMESFNQQVFEQALTERGLDIPKFVQDNHSFSKK-GVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q P+AQ KLVR + GR +D+AVDIR NS T+G WV +E++A+N Q +IP GFAHGF
Sbjct: 66 HYQLNPHAQGKLVRVVQGRAWDVAVDIRENSSTFGEWVGVELTADNHKQFWIPAGFAHGF 125
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ LE NT+ +YK TD+YS E + + W D++I+I WP+ + +++KD+ P L Q D
Sbjct: 126 IALEDNTQFLYKTTDYYSKECERSIVWNDETINIEWPIEKDLEILLTDKDRLAPQLIQAD 185
Query: 177 S 177
Sbjct: 186 K 186
>gi|299137000|ref|ZP_07030183.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium sp. MP5ACTX8]
gi|298601515|gb|EFI57670.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium sp. MP5ACTX8]
Length = 192
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 2/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V++++ +K D RGWFS+ +++K GL D FVQDN SFS G +RGLH+Q
Sbjct: 12 SLRDVKLVRPKKHGDERGWFSEVFNAKSFSAAGLPDRFVQDNQSFSRR-GVLRGLHYQ-L 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G I+D+AVD+R NSP +G W ++ ++IP GF HGF+ L
Sbjct: 70 GEQQGKLVRALSGHIWDVAVDLRPNSPDFGKWAGFDLKGEEIEFLWIPEGFGHGFVVLSE 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
V+YK T+FY + V W D +++ITWPL +PSVS KD L + + P Y
Sbjct: 130 TANVLYKTTNFYYPAGERCVRWDDPTLNITWPLDGIGVPSVSAKDAIGNLLAEAELPPPY 189
Query: 182 D 182
Sbjct: 190 Q 190
>gi|189347269|ref|YP_001943798.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium limicola DSM 245]
gi|189341416|gb|ACD90819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium limicola DSM 245]
Length = 192
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + F D RG+F +TY +++ + FVQDN S S G +RGLH+Q+PP
Sbjct: 8 IPDVLIIEPKVFGDERGYFLETYRQDVIESRIGKVGFVQDNESKSSY-GVLRGLHYQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR ++G + DIAVD+R+ SP +G +V +E+SA ++IP GFAHGF+ L
Sbjct: 67 FTQSKLVRAVSGSVLDIAVDLRKGSPWFGKYVGVELSAERKNMLWIPKGFAHGFVVLSTE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK ++Y+ +HD+GV W D+ + I W + ++ + VS+KD ++D F YD
Sbjct: 127 AVFAYKCDNYYAPDHDAGVLWNDRELAIDWQIPESDI-RVSDKDAKQQLFAEVDC-FIYD 184
Query: 183 G 183
Sbjct: 185 E 185
>gi|288560318|ref|YP_003423804.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC2 [Methanobrevibacter
ruminantium M1]
gi|288543028|gb|ADC46912.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC2 [Methanobrevibacter
ruminantium M1]
Length = 187
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V ++ FED RG+F +TY+ K G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGVFTVEPTVFEDERGYFMETYNENDFKAEGIDLTFVQDNQSKSSK-GVLRGLHFQYT 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G +FD+ VD+R++SPTYG WV +S N Q++IP GFAHGF+ L
Sbjct: 69 Q-PQGKLVRVIKGEVFDVGVDLRKDSPTYGKWVGEILSEENKKQLFIPKGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFLNQIDSPF 179
E +YK TDFY + + G+ W D I I WPL + +SEKD+ + + + F
Sbjct: 128 EAEFVYKCTDFYKGDDEGGIQWNDPEIGIKWPLGNLKEEDIILSEKDKLWKPMKETPTDF 187
>gi|188997299|ref|YP_001931550.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932366|gb|ACD66996.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 188
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 87/174 (50%), Positives = 117/174 (67%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I+K++ FED+RG+F + Y ++ GL FVQDNHS S G +RGLHFQ
Sbjct: 9 EIPEVKIVKSKVFEDARGFFLEFYKKSDFEKAGLNVEFVQDNHSKSVK-GVLRGLHFQEK 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY Q KLVRCI G+IFD+AVDIR +SP + WV++E+S N L ++IP GFAHGF+TL
Sbjct: 68 PYEQGKLVRCIKGKIFDVAVDIRPDSPYFKKWVAVELSEENKLMLWIPPGFAHGFLTLSE 127
Query: 122 NTEVIYKVT-DFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E+IYKV+ + YS +D G+ W D+ I+I WPL +SEKD+ LP L +
Sbjct: 128 EAEIIYKVSHNEYSPAYDRGIIWNDQDINIKWPLETIDNLILSEKDKKLPTLKE 181
>gi|294053939|ref|YP_003547597.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coraliomargarita akajimensis
DSM 45221]
gi|293613272|gb|ADE53427.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coraliomargarita akajimensis
DSM 45221]
Length = 178
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + +++ D RG+F++TY ++ L+ G++ VQ N S+S GT+RGLH Q+
Sbjct: 6 LPLEGAWLIELEPRGDDRGYFARTYCAQELEAHGIESRVVQSNTSYSRYAGTMRGLHMQQ 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ ++KL+R +AG D+ VD+R SPTY +E+SA N +Y+P GFAHGF+TL
Sbjct: 66 APHEESKLMRAVAGSFLDVMVDLRPQSPTYLQHYKIELSAQNRRMVYVPGGFAHGFLTLV 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+TE +Y V+++Y+ ++GV + D ++ I WP+ VSEKD+ P L+
Sbjct: 126 DHTEALYMVSEYYTPGAETGVRYDDPALGIEWPIPVRE---VSEKDRTWPLLS 175
>gi|206968279|ref|ZP_03229235.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1134]
gi|229177734|ref|ZP_04305108.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 172560W]
gi|229189408|ref|ZP_04316425.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 10876]
gi|206737199|gb|EDZ54346.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1134]
gi|228593999|gb|EEK51801.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus ATCC 10876]
gi|228605698|gb|EEK63145.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus 172560W]
Length = 181
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDDRGFFSESYNKQVLETLGITYSFVQDNVSYSAKAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ D P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKDLAIPWPVTD---PILSDKDQILPLLEEYEDSF 181
>gi|228938436|ref|ZP_04101045.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971315|ref|ZP_04131942.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228977925|ref|ZP_04138306.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis Bt407]
gi|228781842|gb|EEM30039.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis Bt407]
gi|228788351|gb|EEM36303.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228821173|gb|EEM67189.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326938943|gb|AEA14839.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 181
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFSESYNKQVLETLGITYSFVQDNVSYSAKAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSG+ W+DK + I WP+ D P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAKHDSGLLWEDKDLAIPWPVTD---PILSDKDQILPLLEEYEDSF 181
>gi|156743590|ref|YP_001433719.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseiflexus castenholzii DSM
13941]
gi|156234918|gb|ABU59701.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseiflexus castenholzii DSM
13941]
Length = 193
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 99/172 (57%), Gaps = 4/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I++ F D RG+F ++++S+ G+ FVQDNHS S +RG H+Q
Sbjct: 10 LPGAVIIEPVCFRDERGFFLESWNSRDFAARGIAIDFVQDNHSRSVK-NVLRGFHYQDMT 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLVRC G + D+ VD+R SPT+G W ++E++A+N LQ+ +P GF H F+TL
Sbjct: 69 APMVKLVRCTLGNVLDVIVDLRVGSPTFGRWHAVELTADNMLQLLVPIGFGHAFLTLSDV 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E+ YK + +Y+ + +AW D I + WP+ D P +S++D+ L +
Sbjct: 129 AEIQYKCSIYYTPAAEGVIAWNDPDIGVPWPVTD---PILSQRDRKGMRLAE 177
>gi|261210463|ref|ZP_05924757.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio sp. RC341]
gi|260840521|gb|EEX67087.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio sp. RC341]
Length = 181
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 107/174 (61%), Gaps = 6/174 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T+S K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWSQKRFEELVTGKPTTFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G ++D+AVD+R SPT+G W+ + +S+ N Q+++P GFAHGF L
Sbjct: 66 TENT-QGKLVRVVSGEVYDVAVDVRAESPTFGQWIGVHLSSENKRQLWVPEGFAHGFYVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK TD+Y+ + + W DK + I WP+ P +S+KDQN +
Sbjct: 125 SEEAEFVYKCTDYYNPSAEVSIRWDDKELSIEWPIDTG--PYLSDKDQNGFSFS 176
>gi|319788036|ref|YP_004147511.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoxanthomonas suwonensis
11-1]
gi|317466548|gb|ADV28280.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoxanthomonas suwonensis
11-1]
Length = 185
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/188 (39%), Positives = 106/188 (56%), Gaps = 9/188 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +++ F D RG F +T++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 7 SLPGCVVIEPAVFGDERGVFFETWNAERFGQQGLPTRFVQSNVSTS-TRGVLRGLHYQWP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G ++D+AVDIRR SPT+G W ++ +SA N Q +IP GFAHGF L
Sbjct: 66 R-PQGKLVSVLEGEVYDVAVDIRRGSPTFGRWEAVVLSAENRRQFWIPEGFAHGFAVLSG 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ Y TD Y E+D+ V W D I + WP+ P +S KD N PFL +I
Sbjct: 125 HAVFNYMCTDVYVKENDAAVRWNDGDIGVDWPI---AEPVLSAKDANAPFLAEIAE---- 177
Query: 182 DGLPLLSL 189
D LP+ +
Sbjct: 178 DRLPVYTP 185
>gi|292492257|ref|YP_003527696.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus halophilus Nc4]
gi|291580852|gb|ADE15309.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus halophilus Nc4]
Length = 181
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V +++ R F D RG+F ++Y+ +Q FVQDNHS S +RGLH+Q
Sbjct: 7 KLPEVLLIEPRVFGDKRGFFFESYNKIAFAAATDIQAEFVQDNHSCSARH-VLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR +AG +FD+AVD+RR+S ++G WV +SA N Q+++P GFAHGF+ L
Sbjct: 66 RQ-PQGKLVRVVAGEVFDVAVDLRRSSSSFGHWVGCHLSAENKHQLWVPEGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ E++ + W D + I WPL P VS KDQ + +
Sbjct: 125 EYAEFLYKTTDYYAPEYERCIRWDDPELAIDWPLEK--APLVSTKDQAGVAFKEAE 178
>gi|53804351|ref|YP_113746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylococcus capsulatus str.
Bath]
gi|53758112|gb|AAU92403.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylococcus capsulatus str.
Bath]
Length = 185
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V ++ + F D+RG+F +T+S + ++ GL FVQDN S+S G +RGLHFQ P
Sbjct: 7 DLPGVLLISPKVFGDARGYFKETWSRQRYQDAGLPGDFVQDNLSYSRK-GILRGLHFQNP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV+ + G +FD+AVDIR SP +G W +SA N LQ+Y+P GFAHGF L
Sbjct: 66 R-PQGKLVQVLQGEVFDVAVDIRYGSPHFGRWFGTVLSAENHLQMYVPEGFAHGFCVLTE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK T++Y + + W D I I WPL P +S KD++ P L +
Sbjct: 125 AALFAYKCTEYYEPSSEFSLRWDDPDIGIAWPL--DSAPELSAKDRDAPRLRDLP 177
>gi|52144117|ref|YP_082711.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus E33L]
gi|51977586|gb|AAU19136.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus E33L]
Length = 181
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDDRGFFTESYNKKVLETLGVTHSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + F
Sbjct: 130 VMYKVDEYYSADHDSGVIWDDKELAIPWPV---TSPILSDKDRILPLLQECKDSF 181
>gi|75759809|ref|ZP_00739886.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896252|ref|YP_002444663.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus G9842]
gi|228899900|ref|ZP_04064144.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
4222]
gi|228964266|ref|ZP_04125385.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74492709|gb|EAO55848.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543340|gb|ACK95734.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus G9842]
gi|228795363|gb|EEM42851.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228859740|gb|EEN04156.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis IBL
4222]
Length = 181
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+FS++Y+ ++L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDERGFFSESYNKQVLETLGITYSFVQDNVSYSAKAGTIRGLHFQKKPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R+ SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKKSPTFKQWKGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS EHDSG+ W+DK + I WP+ D P +S+KDQ LP L + + F
Sbjct: 130 VMYKVDEYYSAEHDSGLLWEDKDLAIPWPVTD---PILSDKDQILPLLEEYEDSF 181
>gi|308234493|ref|ZP_07665230.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium vaginae DSM 15829]
Length = 198
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 77/184 (41%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ + I+ T+ F D RG+F +TY + G+ FVQDNHS S G +RGLHFQ
Sbjct: 17 KVDGLFIINTKIFGDERGFFMETYKEPDFIQAGITTKFVQDNHSKSCR-GVLRGLHFQIH 75
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q+KLVR + GR+FD+AVD+R++S TYG W + +S +N Q +IP GFAHGF+ L
Sbjct: 76 -HPQSKLVRVVKGRVFDVAVDLRKDSATYGQWEGVILSEDNHTQFFIPQGFAHGFLVLSD 134
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL------DTILPSVSEKDQNLPFLNQI 175
E YK D Y + G+ W D I I WP L D +SEKD+ PFL
Sbjct: 135 EAEFCYKCDDIYHPGDEGGIMWNDPDIAIEWPALSGDTAFDPSELILSEKDKTHPFLRDS 194
Query: 176 DSPF 179
F
Sbjct: 195 KVSF 198
>gi|15679778|ref|NP_276896.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|74548927|sp|O27818|RMLC_METTH RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|12084451|pdb|1EP0|A Chain A, High Resolution Crystal Structure Of
Dtdp-6-Deoxy-D-Xylo-4- Hexulose 3,5-Epimerase From
Methanobacterium Thermoautotrophicum
gi|12084452|pdb|1EPZ|A Chain A, Crystal Structure Of Dtdp-6-Deoxy-D-Xylo-4-Hexuloase 3,5-
Epimerase From Methanobacterium Thermoautotrophicum With
Bound Ligand.
gi|2622921|gb|AAB86256.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 185
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 77/173 (44%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+++ I++ + D RG+F +T++ + +E GL+ FVQDN S S G +RGLHFQR
Sbjct: 10 SLDGAIIIEPEVYTDERGYFMETFNEAIFQENGLEVRFVQDNESMSVR-GVLRGLHFQRE 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G IFD+AVD+R+NS TYG W + +S N + +IP GFAHGF+ L
Sbjct: 69 K-PQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V YK T+ Y E+DSG+ W D I I WPL +SEKD+N L +
Sbjct: 128 ECIVNYKCTELYHPEYDSGIPWDDPDIGIDWPLEMVDDLIISEKDRNWKPLRE 180
>gi|237799712|ref|ZP_04588173.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022567|gb|EGI02624.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 181
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K +E +G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVIVFEPKTFGDERGFFFESFNQKAFEEVVGRPVKFVQDNHSRS-VKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G +FD+AVD+R++SPT+G WV L ++A N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ EH+ + W D S+ I WP + PS+S KDQ +
Sbjct: 124 SESAEFLYKTTDYWAPEHERSLVWNDASVGIEWPFSE--APSLSAKDQKAVAFEDAE 178
>gi|288869616|ref|ZP_05975254.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanobrevibacter smithii
DSM 2374]
gi|288860621|gb|EFC92919.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanobrevibacter smithii
DSM 2374]
Length = 188
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + +++ + D+RG+F +TY+ K K+ G FVQDN S SF G +RGLH Q
Sbjct: 13 DIEGMFVVEPAVYGDNRGYFMETYNEKDFKDAGYDLTFVQDNQSQSFK-GVLRGLHLQ-L 70
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR I G +FD+ VD+R +SPTYG W +SA N Q+YIP FAHGF+ L
Sbjct: 71 KYPQGKLVRVIKGEVFDVGVDLRADSPTYGKWYGEILSAENKKQLYIPPKFAHGFVVLSD 130
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK T+FY E + G+ W D I + WPL ++S+KD+ L +
Sbjct: 131 EAEFVYKCTEFYHGEDEGGIMWNDPDIAVEWPLGGIDEITLSDKDKKWKTLKE 183
>gi|229512766|ref|ZP_04402234.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae TMA 21]
gi|29726007|gb|AAO88936.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
gi|229350276|gb|EEO15228.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio cholerae TMA 21]
Length = 183
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/177 (42%), Positives = 107/177 (60%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + W D I I WPL T P +S KDQ ++
Sbjct: 125 SDEAEFVYKCTDYYNPTAEHSLLWNDPDIAIVWPLSGT-EPQLSVKDQLGCNISNAK 180
>gi|16331184|ref|NP_441912.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechocystis sp. PCC 6803]
gi|1653678|dbj|BAA18590.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechocystis sp. PCC 6803]
Length = 182
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 6/180 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ K+ ++ G++ FVQDNHSFS G +RGLH+Q
Sbjct: 8 IADVLILEPKVFGDERGFFFESYNDKVFQQAVGIEPHFVQDNHSFSRQ-GVVRGLHYQI- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G IFD+AVD+RRNSP++G WV ++ +N Q++IP GFAHGF L
Sbjct: 66 QHPQGKLVRVARGEIFDVAVDLRRNSPSFGQWVGCVLNDHNKRQLWIPAGFAHGFAVLSP 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
EV+YK TD+Y+ ++ + W D +I I W L T P +S KDQ L + + F++
Sbjct: 126 EAEVLYKATDYYAPSYERTLLWNDPAIGIDWSL--TTTPLLSLKDQRGLPLAEAEV-FDF 182
>gi|241204008|ref|YP_002975104.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857898|gb|ACS55565.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 192
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 115/177 (64%), Gaps = 1/177 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E F+QDN S S GT+RGLHFQ PP
Sbjct: 8 IEGIIAITPPRFGDHRGYFSEVFKDAWFRENVADVTFIQDNESLSAQTGTVRGLHFQIPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI DI VDIR SP++G W+S E+S NG+Q+++P GFAHGF TLE N
Sbjct: 68 FAQGKLVRCLAGRIMDIVVDIREGSPSFGKWLSQELSPENGMQLWVPAGFAHGFATLEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ + YKVT YS +HD G+AW D +I I WP + + +S+KD+ LP L + F
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFYERDM-VLSDKDKTLPRLADLPGHF 183
>gi|22759341|gb|AAC70776.2| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase [Klebsiella pneumoniae]
Length = 184
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/176 (46%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + R F D+RG+F +++SSK+ E G Q FVQDNHS S +RGLH+Q
Sbjct: 7 DIPDVLIFEPRVFGDARGFFFESFSSKVFNEAVGRQVEFVQDNHSQSQK-RVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+ G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGFM L
Sbjct: 66 DPHAQGKLVRCVEGEVFDVAVDIRRSSPTFGKWVGAVLSAENKRQLWIPEGFAHGFMALS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y+ + + + W D I I WP L + S+SEKD L +
Sbjct: 126 DTVQFVYKGTNYYAPQSERSIIWNDPEIRIDWPALSDCVLSLSEKDLRAHTLATAE 181
>gi|302669916|ref|YP_003829876.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC2 [Butyrivibrio
proteoclasticus B316]
gi|302394389|gb|ADL33294.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC2 [Butyrivibrio
proteoclasticus B316]
Length = 181
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++++ + F DSRG+F +TY+ E G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLKVITPQVFGDSRGYFVETYNKNDFVEAGITCEFVQDNQSASKR-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVRCI G +FD+AVD+RR+S T+G W + +SA N Q +IP GFAHGF+ L
Sbjct: 68 EFPQDKLVRCINGEVFDVAVDLRRDSKTFGKWFGVVLSAENKKQFFIPKGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK +DFY + G+ W D I + WPL D + S+KD + +
Sbjct: 128 YAEFAYKCSDFYHPNDEGGLIWNDPDIGVEWPLQDGVELIFSDKDTKWGGIKEF 181
>gi|114332204|ref|YP_748426.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosomonas eutropha C91]
gi|114309218|gb|ABI60461.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosomonas eutropha C91]
Length = 181
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/177 (37%), Positives = 106/177 (59%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + +++ + + D RG+F ++++ +E+ G FVQDNHS S +RGLH+Q
Sbjct: 6 LAIPDIYLIEPKVYGDERGFFFESFNQASFEEIIGRPVQFVQDNHSRSMK-NVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FD+A+D+R++S T+G W +SA N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVVQGEVFDVAIDLRKSSATFGQWTGEILSAENKYQLWIPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ H+ + W D ++DI WP I P++S KD +Q +
Sbjct: 124 SNTAEFLYKTTDYYAPVHERCILWNDPTLDIAWP--AGIQPALSTKDALGTPFDQAE 178
>gi|312877140|ref|ZP_07737111.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796114|gb|EFR12472.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 193
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ FED+RG+F ++++ K E+GL FVQDNHS S G +RGLHFQ P
Sbjct: 11 IKDLYIIEPTVFEDNRGFFMESWNEKEFNEIGLNIKFVQDNHSRS-KKGVLRGLHFQ-EP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I G +FD+AVDIR +SPT+ W + + +N +YIP GF HGF+TL
Sbjct: 69 YPQGKLVRVIRGAVFDVAVDIREDSPTFKKWFGIVLDEHNRRMLYIPEGFLHGFLTLSEW 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT--ILPSVSEKDQNLPFLNQ 174
+V+YK T++Y E+D G+ W D ++I WPL + P +SEKD LP +
Sbjct: 129 ADVLYKATEYYYKEYDRGIIWYDPDLEIKWPLEEYGIDKPILSEKDSQLPTFEE 182
>gi|313673142|ref|YP_004051253.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939898|gb|ADR19090.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 185
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/174 (48%), Positives = 113/174 (64%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + ++K + F D RG+F +TY K LG+ D FVQDNHS S GTIRGLHFQ+ P
Sbjct: 10 IDGLLVIKPQMFRDDRGFFMETYKESDFKSLGISDRFVQDNHSKSKK-GTIRGLHFQKQP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR G +D+AVDIR+ SPT+G W +LE+S N L ++IP GFAHGF+ LE +
Sbjct: 69 HAQGKLVRVTRGAAWDVAVDIRKGSPTFGKWYALELSGENNLMLWIPAGFAHGFLALEDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
TE++YK T Y D G+ W D I + WP I +S+KD LP+L I+
Sbjct: 129 TELLYKCTAEYHAPSDGGIRWNDPIIGVKWP-ELGIPYIISQKDMQLPYLKDIE 181
>gi|88813324|ref|ZP_01128562.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Nitrococcus mobilis Nb-231]
gi|88789382|gb|EAR20511.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Nitrococcus mobilis Nb-231]
Length = 182
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V ++K + D+RG+F +T+ + ++ GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPDVILIKPQVAGDARGYFMETWHERKFQDAGLDVRFVQDNHSRSRH-GILRGLHYQIRQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G +FD+AVD+RR+SP++G WV +E+S N ++IP GFAHGF +
Sbjct: 67 -PQGKLVRVVSGAVFDVAVDLRRSSPSFGQWVGVELSEENKHMLWIPPGFAHGFYVSAEH 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TDF++ +H+ + W D +DI WP+ P +SEKD+ + +
Sbjct: 126 AEFVYKCTDFWAPQHERTIRWDDSELDIAWPIPTHAAPLLSEKDRAGVAFSDAE 179
>gi|73540421|ref|YP_294941.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia eutropha JMP134]
gi|72117834|gb|AAZ60097.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia eutropha JMP134]
Length = 183
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ + F D RG+F ++++++ ++ GL+ FVQDNHS S G +RGLH+Q
Sbjct: 10 IPEVKIIEPKVFGDDRGFFLESFNARAFEQAMGLKRDFVQDNHSRSAC-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR +AG +FD+AVD+R++SPT+G WV + +S +N Q+++P GFAHGF+ +
Sbjct: 68 QHPQGKLVRVVAGEVFDVAVDLRKSSPTFGKWVGVTLSVDNKRQLWVPEGFAHGFLVMSS 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD++ E++ + W D ++ I WPL P ++ KD+ ++
Sbjct: 128 SAEFLYKTTDYWYPEYERSLLWNDPTVGIEWPLTGD--PILAAKDEAGKLFKDVE 180
>gi|237718562|ref|ZP_04549043.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_2_4]
gi|229452022|gb|EEO57813.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_2_4]
Length = 182
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ R F D RG+F + Y + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPRVFSDERGYFMEAYKKEEFEANIGPVNFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKLVR + G + D+AVD+R++SPT+G V + +S N Q +IP GFAHGF L
Sbjct: 66 EHSQAKLVRVLKGEVLDVAVDLRKSSPTFGKHVCVLLSEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D+++ I WPL ++ + +S KD+
Sbjct: 126 EAVFTYKVDNKYAPQAEASILYNDETLGIDWPLAESQM-LLSAKDREGTAFKDA 178
>gi|325131106|gb|EGC53827.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
OX99.30304]
gi|325137129|gb|EGC59724.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis M0579]
gi|325201248|gb|ADY96702.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M01-240149]
gi|325207107|gb|ADZ02559.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
NZ-05/33]
Length = 185
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDGWFKENIADCSFVQENHSKS-GKGVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
TE+ YK TD+Y E + + W D +I I WPL P +S KD Q +
Sbjct: 126 TELTYKCTDYYKPEAEQVLIWNDPAIGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|260174899|ref|ZP_05761311.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D2]
gi|315923142|ref|ZP_07919382.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313697017|gb|EFS33852.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 182
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ R F D RG+F + Y + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPRVFSDERGYFMEAYKKEEFEANIGPVNFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKLVR + G + D+AVD+R++SPT+G V + +S N Q +IP GFAHGF L
Sbjct: 66 EHSQAKLVRVLKGEVLDVAVDLRKSSPTFGKHVCVLLSEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D+++ I WPL ++ + +S KD+
Sbjct: 126 EAVFTYKVDNKYAPQAEASILYNDETLGIDWPLAESQM-LLSAKDREGTAFKDA 178
>gi|251790437|ref|YP_003005158.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya zeae Ech1591]
gi|247539058|gb|ACT07679.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya zeae Ech1591]
Length = 178
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 100/174 (57%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ + F D+RG+F +T+ K +E L + FVQDNHS S G +RGLHFQ
Sbjct: 8 IQGVKIIQPKVFGDARGFFLETFEKKRYQEMLDIDLDFVQDNHSRSAR-GVLRGLHFQ-T 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+ VDIR +S TYG W + +S N Q +IP G AHGF+ L
Sbjct: 66 VNPQGKLVRVVRGEVFDVVVDIRPDSATYGRWEGVLLSEENKAQFWIPPGLAHGFVVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y+ H+ + W D I I WP+ P +SEKD ++
Sbjct: 126 LADFEYKCTDYYNPAHEGCLLWNDPDIGIDWPI---ASPLLSEKDSKGKTFKEL 176
>gi|224184715|gb|ACN39588.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga
canimorsus]
Length = 189
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 71/181 (39%), Positives = 109/181 (60%), Gaps = 5/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ F D RG+F +++S + E + FVQDN S S G +RGLHFQ+P
Sbjct: 7 EIKDVIIIEPEIFGDERGYFFESFSQEKFVEQVCKTTFVQDNESKSRY-GVVRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P++Q+KLVR + G++ D+AVDIR+ SPT+G V++E+SA N Q+++P GFAHGF L
Sbjct: 66 PFSQSKLVRVVVGKVLDVAVDIRKGSPTFGKHVAVELSAENKRQLFVPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK ++Y+ + + V W D ++ I W + + +S+KD+ P L F +
Sbjct: 126 EVIFQYKCDNYYNPKEEGSVLWNDPALQIDWKIPHQDI-ILSQKDKESPLLKD---TFHF 181
Query: 182 D 182
D
Sbjct: 182 D 182
>gi|26987007|ref|NP_742432.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida KT2440]
gi|24981624|gb|AAN65896.1|AE016217_8 dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Pseudomonas
putida KT2440]
Length = 181
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F DSRG+F + ++++ E G+ FVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVLIIEPKVFADSRGFFFEAFNAREFSEQTGVNVTFVQDNHSRSIK-GVLRGLHYQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G I DIAVD+R++SPT+G WV++ +SA+N Q++IP GFAHGF +
Sbjct: 67 NT-QGKLVRVVHGEIRDIAVDVRKSSPTFGKWVAVHLSADNHRQLWIPPGFAHGFAVMSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ D + W D + I W L P +S+KD+ L + +
Sbjct: 126 SAEFLYKTTDYYNPGADRCIRWDDPQLAIDWGL--QQPPLLSDKDKVGLPLAEAE 178
>gi|325261283|ref|ZP_08128021.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. D5]
gi|324032737|gb|EGB94014.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. D5]
Length = 193
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/171 (44%), Positives = 104/171 (60%), Gaps = 2/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ DSRG+F +TY+ + E GL VFVQDN S S G +RGLHFQ
Sbjct: 21 IEGLYVIEPTVHRDSRGYFIETYNQNDMHEAGLDLVFVQDNQSMSTK-GVLRGLHFQ-NQ 78
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I G ++D+AVD+R+NS TYG W LE+S N Q YI GFAHGF+ +
Sbjct: 79 YPQGKLVRVIQGSVYDVAVDVRKNSKTYGQWFGLELSEENNKQFYISEGFAHGFLVMSDV 138
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+KVTDF+ +++ G+ W D +I + WPL P +SEKD++ P
Sbjct: 139 ARFCFKVTDFWHPDNEIGIPWDDSAIGVEWPLKKGQEPIISEKDKHYPGFA 189
>gi|160884576|ref|ZP_02065579.1| hypothetical protein BACOVA_02563 [Bacteroides ovatus ATCC 8483]
gi|293373077|ref|ZP_06619445.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides ovatus SD CMC 3f]
gi|156110315|gb|EDO12060.1| hypothetical protein BACOVA_02563 [Bacteroides ovatus ATCC 8483]
gi|292631963|gb|EFF50573.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides ovatus SD CMC 3f]
Length = 182
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ R F D RG+F + Y + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPRVFSDERGYFMEAYKKEEFEANIGPVNFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKLVR + G + D+AVD+R++SPT+G V + +S N Q +IP GFAHGF L
Sbjct: 66 EHSQAKLVRVLKGEVLDVAVDLRKSSPTFGKHVCVLLSEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D+++ I WPL ++ + +S KD+
Sbjct: 126 EAVFTYKVDNKYAPQAEASILYNDEALGIDWPLAESQM-LLSAKDREGTAFKDA 178
>gi|221201086|ref|ZP_03574126.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2M]
gi|221206462|ref|ZP_03579475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2]
gi|221173771|gb|EEE06205.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2]
gi|221178936|gb|EEE11343.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2M]
Length = 183
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++ + E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNGREFAEQVEPGVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIRR+SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRRSSPNFGKWVGVTLSADNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EH+ +AW D I I WP+ P ++ KD L + +
Sbjct: 128 AAQFLYKTTDYWYPEHERSIAWNDPDIGIEWPI--DFEPLLAAKDAAGKRLAEAEC 181
>gi|29725997|gb|AAO88928.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 181
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 6/174 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPAVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD VDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDAPVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK TD+Y+ + + W D I I WP+ I P +S KD++ +
Sbjct: 125 SDEAEFVYKCTDYYNPTAEHSLLWNDPDIGIEWPI--DIQPVLSAKDESGLQFS 176
>gi|217421153|ref|ZP_03452658.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
576]
gi|217396565|gb|EEC36582.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
576]
Length = 183
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E F+QDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFAEQVDAGVEFIQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVVLSADNHRQLWVPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ E + +AW D +I I WP+ D P ++ KD L + +
Sbjct: 128 AAQFLYKTTDYWFPEFERSIAWNDPAIGIDWPIDDE--PLLAAKDAAGKLLAEAE 180
>gi|315178427|gb|ADT85341.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio furnissii NCTC
11218]
Length = 183
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+N V +++ F D RG+F ++++ +G+ +FVQDNHS S G +RGLH+Q
Sbjct: 9 LNDVFVIEMPVFGDERGFFMESFNQSKFNDAIGIPTIFVQDNHSKSSQ-GVLRGLHYQVS 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AGR+FD+ +D+R++S T+G W E+S +N Q++IP GFAHGF++L
Sbjct: 68 ST-QGKLVRVMAGRVFDVVLDLRKSSTTFGKWQGFELSGDNKKQLWIPEGFAHGFLSLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
N E +YK TD+Y+ + + W D + I WP+ + + +SEKDQ + +
Sbjct: 127 NVEFVYKTTDYYNPNAERTIMWNDSELGIDWPI-EGLELVISEKDQAGVSFSDAE 180
>gi|150376943|ref|YP_001313539.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium medicae WSM419]
gi|150031490|gb|ABR63606.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium medicae WSM419]
Length = 193
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V + ++ D RG+FS+T+S+ ELGL FVQDNHS+S G +RGLH+Q
Sbjct: 8 LGLDEVLEILPQRIGDERGFFSETWSAVRFGELGLALTFVQDNHSYSAAKGVLRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+ Q KLVR + G +FD+AVDIRR SPT+ WV +EISA Q+ IP GFAHGF+TLE
Sbjct: 68 PPFMQNKLVRVVKGAVFDVAVDIRRGSPTFAKWVGVEISARKWNQLLIPKGFAHGFVTLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+TEVIYKVT YS HD + + D I I WP+ T L +S+KD+ P L Q +
Sbjct: 128 ADTEVIYKVTSPYSPAHDRSIRFDDPDIAIAWPVPSTEL-QLSDKDRTAPLLRQAE 182
>gi|13650067|gb|AAK37550.1|AF349575_1 putative dTDP-rhamnose-3,5-epimerase [Azospirillum brasilense]
gi|46241701|gb|AAS83086.1| putative dTDP-rhamnose-3,5-epimerase [Azospirillum brasilense]
Length = 187
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/179 (43%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ VR++ ++F D+RG+F +T++ + GL+ +VQDN S S GT+RG+H+Q
Sbjct: 7 SLPDVRLVVPKRFGDARGYFVETWNEQAFALNGLERRWVQDNQSLSATPGTVRGMHYQLA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KL+R +AGRI D+ VDIRR SPT+G V++E++A+ Q++IP GFAHGF TLE
Sbjct: 67 PFAQTKLIRVLAGRILDVVVDIRRGSPTFGRHVAVELTADGLEQLFIPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT V YKV YS E + + W D ++ I WP + VS+KD P L + F+
Sbjct: 127 NTAVAYKVDAPYSRECERAILWNDPALGIDWPAMAGAS--VSDKDAVAPRLAKATDLFD 183
>gi|332663275|ref|YP_004446063.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Haliscomenobacter hydrossis
DSM 1100]
gi|332332089|gb|AEE49190.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Haliscomenobacter hydrossis
DSM 1100]
Length = 182
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + + + D RG+F + +++ K G+ FVQDN + S G +RGLH+Q P
Sbjct: 8 IPDLLVFEPTVWADERGYFFEAFNAHTFKAAGIDVQFVQDNQARSTF-GVLRGLHYQLAP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ KLVR + G + D+ VDIR SP YG S+ +SA N Q+Y+P GFAHG++ L
Sbjct: 67 YAQGKLVRVLEGEVLDVVVDIRPESPAYGQSYSIRLSAANKKQLYVPRGFAHGYLVLSPT 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK ++Y+ H+ G+ + D ++I W + D +SEKDQ LP +
Sbjct: 127 AEFFYKCDNYYAKAHEGGIHYNDPQLNIDWEI-DLSQVILSEKDQVLPNFGE 177
>gi|160893016|ref|ZP_02073804.1| hypothetical protein CLOL250_00554 [Clostridium sp. L2-50]
gi|156865099|gb|EDO58530.1| hypothetical protein CLOL250_00554 [Clostridium sp. L2-50]
Length = 200
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 107/195 (54%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ DSRG+F +TY+ K ++E GL VFVQDN S S G +RGLHFQ
Sbjct: 11 IEGLYIIEPAVHGDSRGYFMETYNQKDMEENGLNMVFVQDNQSMS-TKGVLRGLHFQ-KE 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G ++D+AVD+R S TYG W +E++ N Q YI GFAHGF+ L
Sbjct: 69 FPQGKLVRVIKGAVYDVAVDLRSGSETYGKWYGVELTEENKKQFYISEGFAHGFLVLSDT 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKVTDFY + G+AW D I I WP L D ++S+KD
Sbjct: 129 AEFCYKVTDFYHPGDEGGLAWNDPEIGIEWPKVFGEYQGNASAEGYHLEDGTALNLSDKD 188
Query: 167 QNLPFLNQIDSPFEY 181
Q L + F++
Sbjct: 189 QKWLGLKE---TFKF 200
>gi|119357790|ref|YP_912434.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
DSM 266]
gi|119355139|gb|ABL66010.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeobacteroides
DSM 266]
Length = 193
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I + F D RG+F +T+ S L+++ + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IPDVLIFEPVVFGDERGYFLETFRSDLIEKHIGRVDFVQDNESKSGY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR + GR+ D+AVD+RR SP YG V+ + ++IP GFAHGF+ L
Sbjct: 67 FTQSKLVRVVKGRVLDVAVDLRRGSPWYGKSVTCLLDDKRRSMLWIPKGFAHGFVVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+YK +Y+ E+D GV W D+++ I W L + + VS KD LP +D F Y+
Sbjct: 127 AVFVYKCDAYYAPEYDGGVRWNDETLGIDWQLSSSDI-RVSGKDALLPAFGDVDC-FAYE 184
>gi|317487717|ref|ZP_07946313.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eggerthella sp. 1_3_56FAA]
gi|325830483|ref|ZP_08163938.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eggerthella sp. HGA1]
gi|316913174|gb|EFV34687.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eggerthella sp. 1_3_56FAA]
gi|325487465|gb|EGC89905.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eggerthella sp. HGA1]
Length = 190
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V ++ + D RG+F +TY G+ FVQDN S S G +RGLHFQ
Sbjct: 18 SIEGVLVVDVTAYGDERGYFVETYKRPDFVAGGIDCEFVQDNQS-SSVKGVLRGLHFQI- 75
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q+KLVR ++G +FD+AVD+R +SPTYG W +SA N Q ++P GFAHGF+ L
Sbjct: 76 EHPQSKLVRVVSGEVFDVAVDLRPDSPTYGKWEGAVLSAENRRQFFVPRGFAHGFLVLSD 135
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK D Y + G+ W D I I WP+ + + +SEKD+ P L +
Sbjct: 136 IAEFCYKCDDVYHPNDEGGLMWNDPEIGIEWPISEGMELVLSEKDKAHPGLKDL 189
>gi|298384767|ref|ZP_06994327.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_14]
gi|298263046|gb|EFI05910.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_14]
Length = 184
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEGVFIIEPRLFKDDRGYFFESFSQREFNEKVRKVNFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G +VS+E++ +N Q +IP GFAHGF L
Sbjct: 67 YAQSKLVRVIKGAVLDVAVDIRKGSPTFGKYVSVELTEDNHRQFFIPRGFAHGFSVLTDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
YK +FY+ + + +AW D + I W + + +SEKD+ L FE
Sbjct: 127 VIFQYKCDNFYAPQSEGALAWDDPDLGIDWRVPANEI-VLSEKDKYHERLRDASWLFE 183
>gi|77164293|ref|YP_342818.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus oceani ATCC
19707]
gi|254434100|ref|ZP_05047608.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus oceani AFC27]
gi|76882607|gb|ABA57288.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus oceani ATCC
19707]
gi|207090433|gb|EDZ67704.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosococcus oceani AFC27]
Length = 181
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V +++ R F D RG+F ++Y+ Q FVQDNHS S +RGLH+Q
Sbjct: 7 SLPGVLLIEPRVFGDERGFFFESYNRAAFAAATDTQVEFVQDNHSRSLQH-VLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR +AG +FD+AVD+RR SP +G WV +SA N Q++IP GFAHGF+ L
Sbjct: 66 CQ-PQGKLVRVVAGEVFDVAVDLRRRSPGFGRWVGYRLSAENRHQLWIPGGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T +Y+ E++ + W D + I WPL P +S KDQ N+ +
Sbjct: 125 EYAEFLYKTTAYYAPEYERCIRWDDSDLAIDWPLDGR--PLISAKDQAGCAFNEAE 178
>gi|190572701|ref|YP_001970546.1| putative DTDP-dehydrorhamnose 3,5-epimerase [Stenotrophomonas
maltophilia K279a]
gi|190010623|emb|CAQ44232.1| putative DTDP-dehydrorhamnose 3,5-epimerase [Stenotrophomonas
maltophilia K279a]
Length = 185
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +++ F D+RG+F +T++++ LGL D FVQ N S S G +RGLH+Q P
Sbjct: 7 KLPGCVVIEPAVFGDARGYFFETWNAERFAALGLPDRFVQSNVSTS-AKGVLRGLHYQWP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G ++D+AVDIRR SPT+G W ++ +SA N Q +IP GFAHGF L
Sbjct: 66 R-PQGKLVSVLEGEVYDVAVDIRRGSPTFGQWEAVVLSAENKKQFWIPEGFAHGFAVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y T+ Y + D+GV W D I + WP+ P++S KD+N PFL I
Sbjct: 125 RAVFSYLCTEVYLKDFDAGVRWNDADIAVDWPIS---APTLSAKDENAPFLKDI 175
>gi|191167713|ref|ZP_03029521.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli B7A]
gi|76366005|gb|ABA42230.1| RmlC [Escherichia coli]
gi|190902226|gb|EDV61967.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli B7A]
Length = 185
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/172 (44%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKIFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y+ + +++ D +I I WP L + +S KD N
Sbjct: 126 ETAEFVYKTTNYYNPSFEKSISYSDPTIKIQWPNLQDMHFKLSNKDLNAKNF 177
>gi|251771903|gb|EES52477.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospirillum
ferrodiazotrophum]
Length = 184
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +L + DSRG+F +++ +K LGL +FVQDNHS S G RGLH+Q
Sbjct: 8 LPGVLLLVPKVHGDSRGFFLESFHAKTFSRLGLPQLFVQDNHSRSVR-GVTRGLHYQ-KR 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +SPT+ W +S N +YIP GFAHGF +
Sbjct: 66 HGQGKLVRVVRGSVFDVAVDLRPDSPTFSRWFGTTLSEENHAMLYIPEGFAHGFQVTSES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ +YK TDFY + + G+ W D + + WP+ + +S+KD LP L+
Sbjct: 126 ADFLYKCTDFYDPQDEGGILWNDPEVGVVWPIAEAA---LSKKDAALPLLS 173
>gi|297718756|gb|ADI50280.1| sugar 3,5-epimerase [Streptomyces sp. MK730-62F2]
Length = 201
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I +L+ + F D RG F + Y +E G Q N S S G +RG+HF
Sbjct: 4 LAIEGAWVLEPKIFPDDRGSFHEWYRGAEFREATGHDLSLAQANCSVS-RRGVLRGVHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ +DIR SPTYG W ++ + + +++ G H FM L
Sbjct: 63 DVPPGQAKYVTCVRGAVLDVVIDIRVGSPTYGTWEAVRLDDDTRHAVFLAEGLGHAFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y ++ Y+ + G+ D ++ I WP + I P +S KD+ P L + +
Sbjct: 123 TDDATVVYLCSEGYAPGREHGIHPLDPALGIEWP--EGITPLLSPKDEQAPTLAEAE 177
>gi|325970221|ref|YP_004246412.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta sp. Buddy]
gi|324025459|gb|ADY12218.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirochaeta sp. Buddy]
Length = 180
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/168 (45%), Positives = 103/168 (61%), Gaps = 3/168 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V +++ R F D RG+F +TY+ + G+ + FVQDN S S G +RGLHFQ
Sbjct: 10 DIEGVFVIEPRVFGDERGYFMETYNKADFHKAGINNEFVQDNQSKS-RKGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y QAKLVR G ++D+AVD+R++SPTYG +V + +SA Q +IP GFAHGF+ L
Sbjct: 68 QYPQAKLVRVTKGEVYDVAVDLRKDSPTYGKYVGVHLSAEKKNQFFIPRGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
E YK +FY E + + W D I I WP IL S+SEKD+ L
Sbjct: 128 EAEFTYKCDEFYHPEDEGSIRWDDPIIGIQWP-EIGILFSLSEKDKAL 174
>gi|325527144|gb|EGD04547.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. TJI49]
Length = 183
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++ + E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNGREFAEHVEPGVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRKHSPNFGKWVGVTLSADNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L++ +
Sbjct: 128 AAQFLYKTTDYWYPEHERSIVWNDPEIGIEWPI--DFEPLLAAKDAAGKRLSEAE 180
>gi|163853094|ref|YP_001641137.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
PA1]
gi|163664699|gb|ABY32066.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
PA1]
Length = 183
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/178 (45%), Positives = 113/178 (63%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V+ + ++ D RGWFS+ Y + +L E G+ + F+QDN SFS GTIRGLHFQ
Sbjct: 7 EISAVKRVIPKRHGDDRGWFSEIYRADILSEHGIANAFLQDNQSFSAPAGTIRGLHFQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R +AG I D+AVD+R +SP+YG V++ + A G Q+++P GFAHGF TLE
Sbjct: 67 PNAQAKLIRVLAGAILDVAVDLRSDSPSYGRHVAVRLDATGGEQLFVPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T V YKV +YS D + W D +I I WP+ + +S KD+ P L + F
Sbjct: 127 DTMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADA-ILSGKDKAAPLLADLGRVF 183
>gi|150019564|ref|YP_001311818.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium beijerinckii
NCIMB 8052]
gi|149906029|gb|ABR36862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium beijerinckii
NCIMB 8052]
Length = 183
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 5/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ + F D RGWF +TY +K + F QDN S+S G +RG+HFQ
Sbjct: 7 KLEGVYIVEPQVFGDERGWFMETY--SRIKTPEIACDFCQDNQSYSKGKGILRGIHFQNG 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQAKLVRC+ G + D+AVD+R+ SPTY WV++E+SA N Q++IP GF HGF+TL
Sbjct: 65 ENAQAKLVRCVKGAVLDVAVDLRKGSPTYKEWVAVELSAENKKQLFIPRGFGHGFLTLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ E +YK ++Y+ E D + + D I + W + + P +SEKD+ P L D F Y
Sbjct: 125 DVEFVYKTDNYYNYESDRSIKFDDPEIGVEWGIEN---PILSEKDKKAPLLKDSDCTFIY 181
Query: 182 D 182
+
Sbjct: 182 N 182
>gi|254671514|emb|CBA09106.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
alpha153]
Length = 184
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+A+D+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAIDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFYVLSDT 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
TE+ YK TD+Y E + + W D +I I WPL P++S KD L +
Sbjct: 131 TELTYKCTDYYKPEAEQVLIWNDPAIGIDWPLQGE--PNLSPKDLAGKVLAEA 181
>gi|255036724|ref|YP_003087345.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dyadobacter fermentans DSM
18053]
gi|254949480|gb|ACT94180.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dyadobacter fermentans DSM
18053]
Length = 181
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/172 (45%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + + R F D RG F ++++ + +LGL FVQDN SFS G +RGLHFQ
Sbjct: 7 SIAGLVEIFPRVFGDDRGMFFESFNEEAFTKLGLPVNFVQDNQSFS-KKGVVRGLHFQNA 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR I GR+ D+AVDIR SPT+G E+S YIP GFAHGF+ LE
Sbjct: 66 PFAQGKLVRVITGRVLDVAVDIRPGSPTFGKHEVFELSGEQNNIAYIPEGFAHGFVALED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
T YK T+ Y+ E +SG+ W D ++I W + D P VSEKD LP
Sbjct: 126 -TIFSYKCTNLYNKESESGILWNDPDLNIDWGIAD---PIVSEKDLVLPTFR 173
>gi|229825468|ref|ZP_04451537.1| hypothetical protein GCWU000182_00828 [Abiotrophia defectiva ATCC
49176]
gi|229790031|gb|EEP26145.1| hypothetical protein GCWU000182_00828 [Abiotrophia defectiva ATCC
49176]
Length = 193
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ + F D+RGWF +++S K +E+G+ FVQDNHSFS GT+RGLHFQ+
Sbjct: 13 IGGLFVIEPKVFGDNRGWFMESWSKKKFEEVGINCEFVQDNHSFSEKKGTLRGLHFQKGE 72
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+QAKLVR + GR++D+AVD+R++SPT+ W +E+S N ++++P GFAHGF+TL N
Sbjct: 73 YSQAKLVRVLRGRVYDVAVDLRKDSPTFLNWFGVELSEENKKELFVPRGFAHGFLTLTDN 132
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFLNQI 175
E YK ++Y+ E + + + D+ I + W L D VS+KD+ P ++
Sbjct: 133 VEFAYKADNYYNKESEGAIRFDDEKIGVDWKLADLGVGEVIVSDKDKTAPGFEEL 187
>gi|28868292|ref|NP_790911.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28851529|gb|AAO54606.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|331019588|gb|EGH99644.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 181
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 111/177 (62%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K +E+ G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVIVFEPKTFGDDRGFFFESFNQKAFEEVVGRSVKFVQDNHSRSVK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR G +FD+AVD+R++SPT+G WV L ++A N Q++IP GFAHGF+ L
Sbjct: 65 IQQ-PQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGFIVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+++ EH+ +AW D ++ I WP +T PS+S KDQ +
Sbjct: 124 SESAEFLYKTTDYWAPEHERSLAWNDATVGIEWPFSET--PSLSAKDQKAVAFEDAE 178
>gi|307246379|ref|ZP_07528455.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255365|ref|ZP_07537175.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259815|ref|ZP_07541533.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852712|gb|EFM84941.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861674|gb|EFM93658.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866113|gb|EFM97983.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 180
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V++L+ + F D RG+F +T+ + K+ FVQ+NHS S G +RGLH+Q
Sbjct: 7 NIPDVKLLEPQVFGDERGFFMETFRDEWFKQNVADRTFVQENHSKS-IKGVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVQGAVFDVAVDLRKSSPTFGQWVGEVLSAENKRQLWVPEGFAHGFYVLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + + W D +I I W L PS+S KD L
Sbjct: 125 TAEFTYKCTDYYNPKAEHSLIWNDPTIAIDWNL--NGEPSLSAKDLAGRALADA 176
>gi|218708291|ref|YP_002415912.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio splendidus LGP32]
gi|218321310|emb|CAV17260.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio splendidus LGP32]
Length = 182
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V+I++ F D RG+F +T+ + + FVQDNHS S G +RGLHFQ+
Sbjct: 8 ISDVKIVEVSVFGDERGFFMETFRADEFMKQTGAKPFVQDNHSKSTK-GILRGLHFQQGQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR +G ++D+AVD+R++SPT+G V +E+SA N Q+++P GFAHGF + +
Sbjct: 67 T-QGKLVRVTSGAVYDVAVDMRQSSPTFGKAVGVELSAENKRQLWVPEGFAHGFYVITDS 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y E + V W D + I WPL+D LP +S KD +
Sbjct: 126 AEFVYKCTDYYHPESEVSVRWDDVELAIEWPLVDGELPQLSAKDADAFSFKDAPK 180
>gi|325145413|gb|EGC67689.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M01-240013]
Length = 179
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E+ YK TD+Y E + + W D +I I WPL P++S KD L +
Sbjct: 126 AELTYKCTDYYKPEAEQVLIWNDPAIGIDWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|125973881|ref|YP_001037791.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum ATCC
27405]
gi|125714106|gb|ABN52598.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum ATCC
27405]
gi|316939921|gb|ADU73955.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum DSM
1313]
Length = 183
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ + F D+RG+F ++Y+ K E GL FVQDNH S G +RG+HFQ
Sbjct: 11 IEGLVVVEPKVFTDTRGFFFESYNKKAFCEFGLTMEFVQDNHIKSRI-GVLRGIHFQ-RK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q +LVR I G+++D+AVD+R+NSPT+G W +E+SA N YIP F H F+TLE +
Sbjct: 69 FPQGRLVRVIKGKVYDVAVDLRKNSPTFGKWYGIELSAENKKMFYIPENFGHAFLTLEDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
TEV+ K T+ Y E +SG+ + D ++I WP ++ + +SEKD+NLP +
Sbjct: 129 TEVLCKTTNVYRPEFESGIIYNDPELNIDWPQIEGDI-VLSEKDKNLPTFKNAE 181
>gi|293415326|ref|ZP_06657969.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli B185]
gi|291432974|gb|EFF05953.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli B185]
Length = 185
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 76/172 (44%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y+ + +++ D +I I WP L + +S KD N
Sbjct: 126 ETAEFVYKTTNYYNPSFEKSISYSDPTIKIQWPNLQDMHFKLSNKDLNAKNF 177
>gi|325129127|gb|EGC51975.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis N1568]
Length = 179
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y E + + W D +I I WPL P++S KD L +
Sbjct: 126 AEFVYKCTDYYKPEAEQVLIWNDPAIGIDWPL--QTEPNLSPKDLAGKVLAEA 176
>gi|308388283|gb|ADO30603.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
alpha710]
Length = 190
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDGWFKENIADCSFVQENHSKS-GKGVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFYVLSDT 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
TE+ YK TD+Y E + + W D +I I WPL P +S KD Q +
Sbjct: 131 TELTYKCTDYYKPEAEQVLIWNDPAIGIGWPL--QTAPLLSPKDLAGKTWAQAEK 183
>gi|161525767|ref|YP_001580779.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans ATCC
17616]
gi|189349511|ref|YP_001945139.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans ATCC
17616]
gi|160343196|gb|ABX16282.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans ATCC
17616]
gi|189333533|dbj|BAG42603.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans ATCC
17616]
Length = 183
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++ + E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNGREFAEQVEPGVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIRR+SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRRSSPNFGKWVGVTLSADNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L + +
Sbjct: 128 AAQFLYKTTDYWYPEHERSIVWNDPDIGIEWPI--EFEPLLAAKDAAGKRLAEAEC 181
>gi|308187468|ref|YP_003931599.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pantoea vagans C9-1]
gi|308057978|gb|ADO10150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pantoea vagans C9-1]
Length = 181
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/176 (46%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I + F D RG+F +++S K +G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKIFEPAVFGDERGFFFESFSQKKFDNAVGRHVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQ KLVRC+AG +FD+AVDIR+ SP +G WV +E+S+ N Q++IP GFAHGF+TL
Sbjct: 66 NPFAQGKLVRCVAGAVFDVAVDIRKQSPFFGQWVGVELSSENKRQLWIPEGFAHGFLTLI 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
NTE +YK T+FYS E + + W D I+I WP +SEKD+ + +
Sbjct: 126 DNTEFVYKTTNFYSKESERSIIWNDPLINIEWP---EKEVLLSEKDKLASLFCEAE 178
>gi|224539523|ref|ZP_03680062.1| hypothetical protein BACCELL_04428 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518861|gb|EEF87966.1| hypothetical protein BACCELL_04428 [Bacteroides cellulosilyticus
DSM 14838]
Length = 182
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 109/177 (61%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ F+D RG+F ++++ + +E + FVQDN S S G IRGLHFQ+PP
Sbjct: 8 IEGVVIIEPHLFKDERGYFFESFNQREFEEKVCKTTFVQDNESKSSY-GVIRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR + G + D+AVDIR+ SPT+G V++E++ NN Q++IP GFAHGF L
Sbjct: 67 FAQSKLVRVVKGAVLDVAVDIRKGSPTFGKHVAVELTENNHCQLFIPRGFAHGFSVLSEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK + Y+ E + +AW D + I W + + +SEKD+ L +++ F
Sbjct: 127 VIFQYKCDNKYAPESEGAIAWGDPDLRIDWRIPMDKV-LLSEKDKQHSNLKEVNWLF 182
>gi|327404038|ref|YP_004344876.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fluviicola taffensis DSM
16823]
gi|327319546|gb|AEA44038.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fluviicola taffensis DSM
16823]
Length = 182
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/179 (44%), Positives = 111/179 (62%), Gaps = 5/179 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ F D RG+F +++ + E G + FVQDN S S G +RGLHFQ P
Sbjct: 8 IVDVLLIQPTIFGDDRGYFFESFHQQKFNEFIGAEINFVQDNESKS-AKGVLRGLHFQAP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR + G + D+A+DIR+NSPTYG VS +SA N +Q YIP GFAHGF+TLE
Sbjct: 67 PHAQGKLVRVVQGSVLDVALDIRKNSPTYGQHVSFVLSAENKMQAYIPAGFAHGFVTLEK 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T YK T++Y+ + + W D ++ I W + P +S+KD+ L +SPFE
Sbjct: 127 DTIFQYKCTNWYNPSSEGSILWNDPALTIQW---QEMNPILSDKDKLGILLADFNSPFE 182
>gi|332525494|ref|ZP_08401652.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Rubrivivax
benzoatilyticus JA2]
gi|332108761|gb|EGJ09985.1| dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase [Rubrivivax
benzoatilyticus JA2]
Length = 191
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSS----KLLKELG--LQDVFVQDNHSFSFDCGTIRGL 56
+ V I++ + D RGWF +T++ + L ELG FVQDNHS S G +RGL
Sbjct: 8 LPGVLIVEPAVYGDERGWFMETFNEPRWRRALDELGEPQPRPFVQDNHSCSHA-GVLRGL 66
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q PP+AQ KLVR + GR FD+AVDIRR S +G W +E+ A N QI+IP GFAHGF
Sbjct: 67 HYQLPPHAQGKLVRVVKGRAFDVAVDIRRGSAHFGQWFGVELDAVNRRQIWIPEGFAHGF 126
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQI 175
+ LE +T+V+YK TD Y+ + G+ W D + I WP L + P +SE+D L
Sbjct: 127 LALEDDTQVLYKTTDVYAAPCEGGIRWDDPDLAIRWPSLPNGAPPRLSERDARAAALKDA 186
>gi|209548787|ref|YP_002280704.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534543|gb|ACI54478.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 192
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ PP
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRGLHFQIPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP++G W+S E+S G Q++IP GFAHGF+T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIRVGSPSFGKWLSQELSPETGKQLWIPAGFAHGFVTIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YKVT YS +HD G+AW D I I WP + + S S+KD+ LP L + F +
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPMIGIRWPFDERDMVS-SDKDKTLPRLADLPGHFSF 185
>gi|110597108|ref|ZP_01385397.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium ferrooxidans DSM
13031]
gi|110341299|gb|EAT59764.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium ferrooxidans DSM
13031]
Length = 199
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 68/181 (37%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V ++ F D RG+F +++ L++E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IPDVLFIEPEVFGDDRGYFFESFRQDLMEEHVGRVEFVQDNESKSGY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR + GR+ D+AVD+R SP YG V + +++P GFAHGF+ L +
Sbjct: 67 FTQSKLVRVVRGRVLDVAVDVRLGSPWYGRHVYSLLDGERKNMMWVPKGFAHGFLVLSED 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK ++Y+ HD+G+ W D ++ I W L ++++ VSE+D D F Y+
Sbjct: 127 AVFSYKCDNYYAPSHDTGIMWNDPALGIDWQLPESVI-RVSERDSKQGKFGLADC-FPYE 184
Query: 183 G 183
Sbjct: 185 E 185
>gi|253567134|ref|ZP_04844585.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Bacteroides sp. 3_2_5]
gi|251944258|gb|EES84767.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Bacteroides sp. 3_2_5]
Length = 192
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + IL+ R F+D RG+F ++++ + Q FVQDN S S G IRGLHFQ+P
Sbjct: 7 SIEGLVILEPRLFQDDRGYFFESFNQGEFESNVCQTTFVQDNESKSSY-GVIRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR I G + D+AVDIR+ SPT+G VS+E++ +N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVIKGAVLDVAVDIRKGSPTFGKHVSVELTEDNHRQFFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY E + +AW D ++I W + T +S+KD + L + F+Y
Sbjct: 126 EVIFQYKCDNFYHPEAEGAIAWNDPDLNIDWRVP-TRKVILSDKDTSHKCLGGVLDLFDY 184
Query: 182 D 182
Sbjct: 185 K 185
>gi|91782044|ref|YP_557250.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
gi|91685998|gb|ABE29198.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
Length = 183
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ + F D RG+F ++++++ +EL G++ FVQDNHS S +RGLH+Q
Sbjct: 9 EIPDVLILEPKVFGDDRGFFYESFNARRFEELTGVKREFVQDNHSRSAR-NVLRGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVD+R+ SPT+G WV + +SA N Q+++P GFAHGF+
Sbjct: 68 QN-PQGKLVRVVTGEVFDVAVDLRKQSPTFGRWVGVTLSAENKRQLWVPEGFAHGFVVTS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ EH+ + W D I I WP++ P++S KD +
Sbjct: 127 EYAEFLYKTTDYWYAEHERSIVWNDPQIGIQWPIVG--QPALSGKDAAGVSFESAE 180
>gi|262275864|ref|ZP_06053673.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Grimontia hollisae CIP
101886]
gi|262219672|gb|EEY70988.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Grimontia hollisae CIP
101886]
Length = 182
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V++++ F D RG+F +TY + L + + VFVQ+NHS S G +RGLH+Q
Sbjct: 7 NIPDVKLIEPTVFGDERGFFMETYRTALFNDHCGERVFVQENHSKSKK-GILRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G +FD+A+D+R+ SP +G WV +SA N Q+++P GFAHGF
Sbjct: 66 NT-QGKLVRVVSGEVFDVAIDMRKRSPYFGQWVGAYLSAENKRQLWVPEGFAHGFYVTSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + + W D ++ I WP+ D PS+S KD+
Sbjct: 125 EAEFVYKCTDYYNPDVEVSIKWNDAALGIDWPIADAGPPSLSAKDEAGFSFFDAP 179
>gi|153806362|ref|ZP_01959030.1| hypothetical protein BACCAC_00623 [Bacteroides caccae ATCC 43185]
gi|149131039|gb|EDM22245.1| hypothetical protein BACCAC_00623 [Bacteroides caccae ATCC 43185]
Length = 182
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D RG+F + + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFFDERGYFMEAFKKEEFESHIGPVNFVQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G + D+AVD+R++SPT+G +VS+ +S N Q +IP GFAHGF L
Sbjct: 66 EYSQAKLVRVIKGEVLDVAVDLRKSSPTFGQYVSVLLSEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + DK++ I WPL +T + +S KD+
Sbjct: 126 EAIFTYKVDNKYAPQAEASILFNDKTLGIDWPLSETQM-LLSSKDREGTAFKDA 178
>gi|46202496|ref|ZP_00053128.2| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Magnetospirillum magnetotacticum MS-1]
Length = 186
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 80/178 (44%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V++L ++F D RG+F++TY++ +L E G+ VFVQDN SFS G +RGLHFQR
Sbjct: 6 LAIPEVKVLTPKRFGDDRGFFAETYNAHILAEHGITAVFVQDNQSFSRPAGVVRGLHFQR 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KL+R + G I D VDIR SP++G V++E+S+ + I++P GFAHGFMTLE
Sbjct: 66 EPYAQDKLLRVVRGAILDAVVDIRPGSPSFGQAVTVELSSEDSASIFVPKGFAHGFMTLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL---DTILPSVSEKDQNLPFLNQI 175
+TEV YKV+ Y+ E + G+ W+D + I+WPL +++ +DQ+ L +
Sbjct: 126 PDTEVFYKVSYRYTPEAEGGIHWRDPDLAISWPLDRIGGEGAVTIAARDQSFGLLRDL 183
>gi|320101333|ref|YP_004176925.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurococcus mucosus DSM
2162]
gi|319753685|gb|ADV65443.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurococcus mucosus DSM
2162]
Length = 187
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 110/181 (60%), Gaps = 4/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I + +++ +D RG+F++ Y + G+ FVQ N S S G +RGLH+Q
Sbjct: 9 LSIPDLMLVEPFVHQDRRGFFTELYKRTVFLSEGIPYSFVQVNMSESRK-GVVRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV + GRI+D+AVDIR+ SP +G ++ +E+S +N ++IP GFAHGF LE
Sbjct: 68 KPMEQGKLVTVLRGRIYDVAVDIRKGSPWFGRYLGVELSEHNKYLLWIPPGFAHGFQALE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
NT V+Y VT YS EH+ ++++D I I WPL +SEKD+ P L + ++ F
Sbjct: 128 DNTVVLYMVTKEYSPEHERCISYRDPDIGIEWPLE---TIFLSEKDEKCPPLKKAETNFN 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|257791790|ref|YP_003182396.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eggerthella lenta DSM 2243]
gi|257475687|gb|ACV56007.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eggerthella lenta DSM 2243]
Length = 190
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V ++ + D RG+F++TY G+ FVQDN S S G +RGLHFQ
Sbjct: 18 SIEGVLVVDVTAYGDERGYFAETYKRPDFVAGGIDAEFVQDNQS-SSTKGVLRGLHFQIH 76
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q+KLVR ++G +FD+AVD+R S TYG W + +SA N Q ++P GFAHGF+ L
Sbjct: 77 -HPQSKLVRVVSGEVFDVAVDLRPGSATYGAWEGVVLSAENRRQFFVPRGFAHGFLVLSD 135
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E YK D Y + G+ W D I I WP+ + + +SEKD+ P L+
Sbjct: 136 IAEFCYKCDDVYHPNDEGGLMWNDPEIGIEWPIPEGMELVLSEKDKAHPGLS 187
>gi|71044437|gb|AAZ20757.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
gi|324019199|gb|EGB88418.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 117-3]
Length = 183
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + + D RG+F + Y+ ELG+ FVQDN S S +RGLHFQ+
Sbjct: 7 KIEDLVIIEPKIYNDERGYFYEFYNKNKFTELGINLDFVQDNRS-SSSQNVLRGLHFQKT 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV G +FD+AVD+R++S T+G + S+ ++ N YIP GFAHGF L
Sbjct: 66 K-PQGKLVTVTKGEVFDVAVDLRKDSRTFGQYESVILTEENKKIFYIPPGFAHGFCVLSN 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ +YK TDFY + G+ W D S+ I WP+ P +S+KD LP L I
Sbjct: 125 KADFLYKCTDFYDPNDEGGIIWNDSSLSIEWPV---NAPILSKKDMELPTLKNI 175
>gi|82777434|ref|YP_403783.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella dysenteriae Sd197]
gi|81241582|gb|ABB62292.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella dysenteriae Sd197]
Length = 185
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 75/172 (43%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G W+ + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWIGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y+ + +++ D +I I WP L + +S KD N
Sbjct: 126 ETAEFVYKTTNYYNPSFEKSISYSDPTIKIQWPNLQDMHFKLSNKDLNAKNF 177
>gi|29726002|gb|AAO88932.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 183
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 7/180 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q++IP GF HGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWIPKGFLHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ E +YK TD+YS EH+ + W D ++I WP + +SEKD L ++ F
Sbjct: 125 SESAEFVYKCTDYYSPEHEVSIIWNDVDLNIKWP---SGRYILSEKDMMGIPLAKLIRDF 181
>gi|168481242|gb|ACA24737.1| RmlC [Escherichia coli]
Length = 178
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++S T+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSSTFGKWVGVNLSAENKRQLWIPEGFAHGFITLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E IYK T FY+ + +AW D ++I W + LP VS+KD + I
Sbjct: 126 NIAEFIYKTTQFYNPSFERVIAWDDPVLNINWNIK--QLPIVSKKDMKGLPFSNI 178
>gi|325129165|gb|EGC52012.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis N1568]
Length = 185
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y E + + W D +I I WPL P++S KD Q +
Sbjct: 126 AEFVYKCTDYYKPEAEQVLIWNDPAIGIDWPL--QTEPNLSPKDLAGKAWAQAEK 178
>gi|115350807|ref|YP_772646.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria AMMD]
gi|115280795|gb|ABI86312.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria AMMD]
Length = 183
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 112/176 (63%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V+I++ + F D+RG+F ++++++ E FVQDNHS S G +RGLH+Q
Sbjct: 9 SLPEVKIVEPKVFGDARGYFYESFNAREFAEHVAADVEFVQDNHSRSAK-GVLRGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQ KLVR + G +FD+AVDIRR+SP +G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 68 -RHAQGKLVRVVEGEVFDVAVDIRRSSPDFGKWVGVVLSAENHRQVWIPPGFAHGFVVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ EH+ + W D +I I WP+ + P ++ KD L++ +
Sbjct: 127 DAAQFLYKTTDYWYPEHERCIVWNDPAIGIEWPV--DVDPLLAAKDAAGARLSEAE 180
>gi|294635550|ref|ZP_06714030.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Edwardsiella tarda ATCC
23685]
gi|291091119|gb|EFE23680.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Edwardsiella tarda ATCC
23685]
Length = 176
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 83/173 (47%), Positives = 116/173 (67%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + + F D RG+F +++S K+ E G Q FVQDNHS S G +RGLHFQ
Sbjct: 7 DIPDVLIFEPKVFGDDRGFFFESFSMKVFNEAVGRQVEFVQDNHSKS-SKGVLRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC G +FD+AVDIR +SPTYG W+ + +S N Q++IP GFAHGF+TL
Sbjct: 66 SPYAQGKLVRCTVGEVFDVAVDIRESSPTYGKWIGVNLSGENKRQLWIPEGFAHGFLTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T++Y +++SG+ W D ++ I+WP ++ + +S KD+NLP L
Sbjct: 126 DTAEFLYKATNYYRPDYESGIIWNDPTLSISWPEINGM--IISTKDKNLPRLK 176
>gi|260174674|ref|ZP_05761086.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D2]
gi|315922937|ref|ZP_07919177.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D2]
gi|313696812|gb|EFS33647.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D2]
Length = 189
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IEGVVIIEPRLFKDDRGYFFESFSQREFTEKVRKVDFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G VS+E++ N Q +I GFAHGF+ L
Sbjct: 67 YAQSKLVRVIKGSVLDVAVDIRKGSPTFGEHVSVELTEENHRQFFISRGFAHGFVVLTEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ + + +AW D ++ I W + + +S KDQ+ L + F+Y+
Sbjct: 127 VIFQYKCDNFYAPQCEGALAWDDPALKIDWKVPADKV-ILSVKDQHHERLEEAGWLFDYN 185
Query: 183 G 183
Sbjct: 186 E 186
>gi|116251392|ref|YP_767230.1| dTDP-rhamnose-3,5-epimerase [Rhizobium leguminosarum bv. viciae
3841]
gi|115256040|emb|CAK07121.1| putative dTDP-rhamnose-3,5-epimerase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 192
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E F+QDN S S GT+RGLHFQ PP
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFIQDNESLSAQAGTVRGLHFQIPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP++G W+S E+S G Q++IP GFAHGF T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIREGSPSFGKWLSQELSPETGKQLWIPAGFAHGFATIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + YKVT YS +HD G+AW D I I WP + + S S+KD+ LP L + F Y
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPMIGIRWPFDERDMVS-SDKDKTLPRLADLPGHFSY 185
>gi|221200997|ref|ZP_03574037.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2M]
gi|221206551|ref|ZP_03579564.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2]
gi|221173860|gb|EEE06294.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2]
gi|221178847|gb|EEE11254.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD2M]
Length = 183
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++ + E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNGREFAEQVEPGVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIRR+SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRRSSPNFGKWVGVTLSADNHWQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L + +
Sbjct: 128 AAQFLYKTTDYWYPEHERSIVWNDPDIGIEWPI--DFEPLLAAKDAAGKRLAEAEC 181
>gi|167763054|ref|ZP_02435181.1| hypothetical protein BACSTE_01420 [Bacteroides stercoris ATCC
43183]
gi|167699394|gb|EDS15973.1| hypothetical protein BACSTE_01420 [Bacteroides stercoris ATCC
43183]
Length = 182
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ + F D+RG+F + + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWIIEPKVFNDARGYFMEAFKEEEFRANIGDVHFVQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G++ D+AVD+RR+SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGKVLDVAVDLRRSSPTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ + ++ + + D++I I WP+ ++ +SEKD + +
Sbjct: 126 EAIFTYKVDNGYAPQAEASIRFNDETIGIDWPVAES-QFILSEKDGHAVSFKDAE 179
>gi|296121781|ref|YP_003629559.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Planctomyces limnophilus DSM
3776]
gi|296014121|gb|ADG67360.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Planctomyces limnophilus DSM
3776]
Length = 181
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V ++ R F DSRG+F + + + GL FVQDN S S GT+RGLHFQ
Sbjct: 8 KLPDVLKIEPRVFGDSRGFFFEVFQQERYSSSGLSQAFVQDNVSRSSR-GTLRGLHFQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
QAKL++ I G IFD+AVD+R++SPT+G W +S N Q+YIP GFAHGF +
Sbjct: 66 VRPQAKLIQVIRGEIFDVAVDVRKSSPTFGQWTGYRLSDVNHHQLYIPAGFAHGFCVISE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+V+YK TD+Y +H+ + W D ++ I WPL D P +S KDQ L ++S
Sbjct: 126 TADVLYKCTDYYFPQHERCLLWNDPAVGIAWPLED--FPILSAKDQQGQTLANLES 179
>gi|222087846|ref|YP_002546384.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium radiobacter
K84]
gi|221725294|gb|ACM28450.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium radiobacter
K84]
Length = 183
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 76/179 (42%), Positives = 102/179 (56%), Gaps = 5/179 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V +L+ R+F D RG F++T+ +ELG FVQDN S S G +RGLH+Q P
Sbjct: 10 IPDVLLLEHREFGDDRGSFTETFRDSAFQELGFP-QFVQDNQSRSSK-GVVRGLHYQVNP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A KLVRC+ GRIFD+AVD+R SPTYG W E++ + Y+P GFAHGFM LE +
Sbjct: 68 NAVGKLVRCVHGRIFDVAVDLRLGSPTYGKWTGTELAGTDNHMFYVPEGFAHGFMALEDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T V Y+ T ++ + + W D + I WP + +S KD N +D F Y
Sbjct: 128 TLVSYRQTGYWDAASERSLLWNDPDVAIDWP---KLAVLLSPKDANATRFADVDHNFRY 183
>gi|237713247|ref|ZP_04543728.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D1]
gi|262406613|ref|ZP_06083162.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_22]
gi|294646163|ref|ZP_06723819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides ovatus SD CC 2a]
gi|294807867|ref|ZP_06766649.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides xylanisolvens SD
CC 1b]
gi|299145719|ref|ZP_07038787.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_23]
gi|229446714|gb|EEO52505.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D1]
gi|262355316|gb|EEZ04407.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_22]
gi|292638492|gb|EFF56854.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides ovatus SD CC 2a]
gi|294444929|gb|EFG13614.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides xylanisolvens SD
CC 1b]
gi|298516210|gb|EFI40091.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_23]
Length = 182
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D RG+F + Y + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFSDERGYFMEAYKKEEFDANIGPVDFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR + G++ D+AVD+R++SPT+G V + +S N Q +IP GFAHGF L
Sbjct: 66 EYSQAKLVRVLKGKVLDVAVDLRKSSPTFGKHVCVLLSEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D+++ I WPL D+ + +S KD+
Sbjct: 126 EAVFTYKVDNKYAPQAEASILYNDETLGIDWPLADSQM-VLSAKDREGTAFKDA 178
>gi|309787874|ref|ZP_07682484.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella dysenteriae 1617]
gi|50982494|gb|AAT91848.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella dysenteriae]
gi|308924273|gb|EFP69770.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shigella dysenteriae 1617]
Length = 185
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 75/172 (43%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G W+ + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWIGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y+ + +++ D +I I WP L + +S KD N
Sbjct: 126 ETAEFVYKTTNYYNPSFEKSISYSDPTIKIQWPNLQDMHFKLSNKDLNAKNF 177
>gi|388935|gb|AAA63159.1| TDP-deoxyglucose-epimerase [Neisseria meningitidis]
Length = 180
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFKDGRGFFMETFRDGWFKENIADCSFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWTGATLSAQNQYQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 126 AEVVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|148545536|ref|YP_001265638.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida F1]
gi|148509594|gb|ABQ76454.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida F1]
Length = 181
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F DSRG+F + ++++ ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVLIIEPKVFADSRGFFFEAFNAREFSQQTGVNMEFVQDNHSRSIK-GVLRGLHYQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G I DIAVD+R++SPT+G WV++ +SA+N Q+++P GFAHGF +
Sbjct: 67 NT-QGKLVRVVHGEIRDIAVDVRKSSPTFGKWVAVHLSADNHRQLWVPPGFAHGFAVMSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ D + W D + I W L P +S+KD+ L + +
Sbjct: 126 SAEFLYKTTDYYNPGADRCIRWDDPQLAIDWGL--QQPPLLSDKDKVGLPLAEAE 178
>gi|24214359|ref|NP_711840.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|45657974|ref|YP_002060.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|5814318|gb|AAD52186.1|AF144879_25 unknown [Leptospira interrogans]
gi|17940024|gb|AAL49431.1|AF316500_18 RmlC [Leptospira interrogans]
gi|24195292|gb|AAN48858.1|AE011344_2 dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|1666505|gb|AAB47840.1| RmlC [Leptospira interrogans]
gi|45601215|gb|AAS70697.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|289450993|gb|ADC93910.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Canicola]
gi|289451077|gb|ADC93993.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Autumnalis]
gi|289451156|gb|ADC94071.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Grippotyphosa]
Length = 186
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++ + F D RG+F +T+ + + ++ + F QDNHS S G +RG+H Q PP
Sbjct: 8 IEGPVLIEPKVFGDERGFFLETFKASIFEKENIPFQFSQDNHSRSSR-GVLRGMHLQIPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G++ D+ VD+R SP YG W+S+E+S N ++P GFAHGF+TLE
Sbjct: 67 YDQGKLVRVVRGKVIDVVVDVRVGSPNYGKWLSVELSEENKNIFWVPPGFAHGFLTLEDK 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T+ +YKVT YS +++ G+ W D ++ I W L VS++DQ PF SPF Y
Sbjct: 127 TDFLYKVTGEYSPQNEVGIRWDDPALGIPWKTWLSDSEFIVSQRDQVTPFFADFKSPFVY 186
>gi|241761596|ref|ZP_04759683.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373904|gb|EER63437.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 183
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I V ++ K+ DSRG+FS+TY+ +K++G+ FVQDN S S + G +RGLH Q
Sbjct: 6 LSIPEVIVIAPPKYIDSRGFFSETYNENSMKKMGIDTPFVQDNQSLSRNKGVVRGLHCQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PY Q KLVRC G I+D+AVD R SPTYG WV+ EIS N QI+IP GF HGF+TL
Sbjct: 66 SPYIQGKLVRCPKGAIWDVAVDARFGSPTYGKWVAAEISEENWSQIWIPPGFLHGFVTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NTEV YK T FY+ + V W ++I WP+ + +SEKD+ P ++ F
Sbjct: 126 ENTEVQYKCTSFYNKASERAVIWNCHRLNIPWPI-NHAEILLSEKDKTAPSFDETKKWF 183
>gi|60680555|ref|YP_210699.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Bacteroides fragilis NCTC
9343]
gi|253563576|ref|ZP_04841033.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Bacteroides sp. 3_2_5]
gi|5199112|gb|AAD40710.1|AF048749_6 dTDP-6-deoxy-D-glucose-3,5 epimerase [Bacteroides fragilis]
gi|60491989|emb|CAH06750.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Bacteroides fragilis NCTC
9343]
gi|251947352|gb|EES87634.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Bacteroides sp. 3_2_5]
Length = 182
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 73/171 (42%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + IL+ + F+D RG+F ++++ + +E + FVQDN S S G IRGLHFQ+PP
Sbjct: 8 IEGLVILEPQLFKDDRGYFFESFNQREFEEKVCKTTFVQDNESKSSY-GVIRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR I G + D+AVDIR+ SPT+G VS+E++ +N Q +IP GFAHGF L
Sbjct: 67 FAQSKLVRVIKGAVLDVAVDIRKGSPTFGKHVSVELTEDNHRQFFIPRGFAHGFSVLSEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
YK +FY E + +AW D + I W + + +S+KD+ P L
Sbjct: 127 VIFQYKCDNFYHPEAEGAIAWNDPDLGIEWRVPCKSI-ILSKKDRVHPLLK 176
>gi|256375866|ref|YP_003099526.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinosynnema mirum DSM
43827]
gi|255920169|gb|ACU35680.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinosynnema mirum DSM
43827]
Length = 200
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 77/172 (44%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ VR+++ FED RG+F ++YS + ++ GL FVQDNHS S G +RGLHFQ
Sbjct: 19 EIDGVRVVQPEWFEDERGFFFESYSKRRWEQHGLHLDFVQDNHSRSSR-GVLRGLHFQTG 77
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +LVRC G I+D+ VDIR SPT+G W +E+SA N Q+ + GFAHGF L
Sbjct: 78 LAPQHRLVRCTVGAIWDVVVDIRVGSPTFGKWFGIELSATNRTQLLMGPGFAHGFAVLSD 137
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV YK T F++ E + +AW D + I WP+ D P++S KD P L
Sbjct: 138 VAEVQYKTTGFHTPEAEGLLAWDDPDVGIPWPIED---PTLSAKDSANPSLA 186
>gi|88860050|ref|ZP_01134689.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Pseudoalteromonas
tunicata D2]
gi|88818044|gb|EAR27860.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase [Pseudoalteromonas
tunicata D2]
Length = 181
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 70/171 (40%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I+ + F D RG+F +T+ K FVQ+NHS S G +RGLH+Q
Sbjct: 8 IADVKIIVPKIFGDERGYFMETFRDDWFKREVADVDFVQENHS-SSKQGILRGLHYQ-TE 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KL+R G IFD+ VD+RR S T+G W ++A N Q+++P GFAHGF + +
Sbjct: 66 HAQGKLIRVTQGEIFDVVVDLRRQSSTFGQWFGCYLNAENKHQLWVPAGFAHGFYVVSQS 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E+IYK TD+Y+ H+ + W D + I WPLL LP++S KD
Sbjct: 126 AEIIYKCTDYYAPAHEHSICWNDTDLAIDWPLLKGTLPTLSLKDSAATPFK 176
>gi|282861853|ref|ZP_06270917.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. ACTE]
gi|282563669|gb|EFB69207.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. ACTE]
Length = 199
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + + + F DSRG F + + + E G + Q N S S GT+RG+HF
Sbjct: 4 LSIPGALVHEPKIFPDSRGSFHEWFQASAFAEATGHRLSLEQANCSVS-SRGTLRGIHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V+C+ G + D+ VDIR SPTY W ++ + +Y+ G H FM L
Sbjct: 63 DVPPSQAKYVKCVRGAVLDVIVDIRVGSPTYRQWEAVRLDDVEHRSVYLSEGLGHAFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y ++ YS + G+ D ++ I WP + P +S+KD P L + +
Sbjct: 123 TDDATVVYLCSEGYSPGREHGINPLDPALGIEWP--ADVPPLLSDKDAAAPTLAEAE 177
>gi|262037148|ref|ZP_06010640.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptotrichia goodfellowii
F0264]
gi|261748836|gb|EEY36183.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptotrichia goodfellowii
F0264]
Length = 190
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/182 (46%), Positives = 116/182 (63%), Gaps = 6/182 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + F DSRG+F +TY+ K +ELGL FVQDNHS S G +RGLHFQ
Sbjct: 11 IKDLVIIEPKVFGDSRGFFMETYNQKSFEELGLTMNFVQDNHSKS-KKGVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I GR+FD+AVD+R+ S TYG W +E+S N L Y+P FAHGF+TL+ +
Sbjct: 69 HTQGKLVRVIKGRVFDVAVDLRKESETYGQWYGVELSEENKLMFYVPERFAHGFLTLDED 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDSP 178
TE +Y+ TD Y+ E+DSG+ W DK+++I W + ++SEKDQ +
Sbjct: 129 TEFVYRCTDLYAPEYDSGILWNDKTLNIDWKFEEFGINPEELTISEKDQKQQNFQPEKNY 188
Query: 179 FE 180
FE
Sbjct: 189 FE 190
>gi|163851815|ref|YP_001639858.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
PA1]
gi|163663420|gb|ABY30787.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
PA1]
Length = 183
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++ D RGWFS+ Y + LL E G+ + FVQDN SFS GTIRGLHFQ
Sbjct: 7 EIPAVKRVIPKRHGDDRGWFSEVYRADLLAERGIANAFVQDNQSFSAPAGTIRGLHFQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+R +AG I D+AVD+R NS +YG V++ + A G Q+++P GFAHGF TLE
Sbjct: 67 PNAQAKLIRVLAGAILDVAVDLRSNSSSYGRHVAVRLDATGGEQLFVPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
++ V YKV +YS D + W D +I I WP+ + +S KD+ P L + F
Sbjct: 127 DSMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADA-ILSGKDKAAPLLADLGRVF 183
>gi|188581603|ref|YP_001925048.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium populi
BJ001]
gi|179345101|gb|ACB80513.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium populi
BJ001]
Length = 183
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/178 (47%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + ++ D RGWFS+ Y + +L E G+ + FVQDN SFS GTIRGLHFQ
Sbjct: 7 EIPAVKRVIPKRHGDGRGWFSEVYRADVLAEHGIANAFVQDNQSFSAPAGTIRGLHFQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLVR +AG I D+AVD+R +SP+YG V++ + A G Q+++P GFAHGF TLE
Sbjct: 67 PNAQAKLVRVLAGAILDVAVDLRSDSPSYGRHVAVRLDAAGGEQLFVPAGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT V YKV +YS D + W D +I I WP+ D +S KD+ P L + F
Sbjct: 127 NTMVAYKVDAYYSPADDRNLRWNDPAIGIEWPVADADA-ILSGKDKGAPLLADLGRVF 183
>gi|307318652|ref|ZP_07598085.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti AK83]
gi|306895679|gb|EFN26432.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti AK83]
Length = 187
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 122/181 (67%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V + R+ D RG+FS+TY+++ L G+ +FVQDNHS+S GT+RGLH+Q
Sbjct: 7 LGLDGVLEIVPRRLGDERGFFSETYNAETLAAHGVAAIFVQDNHSYSAAAGTLRGLHYQL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQAKLVR + GR+FD+ VDIR+ SPT+ WV+LE+SA QI +P GFAHG +TLE
Sbjct: 67 PPKAQAKLVRVVRGRVFDVVVDIRKGSPTFAKWVALELSAEKWNQILVPVGFAHGLVTLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
TEV+YKV++ YS EH+ + + D I I WP T +S KD+N P L++ FE
Sbjct: 127 PETEVLYKVSEHYSAEHERSIRYDDPEIGIGWP-AATDRLQLSAKDRNAPLLHE-SILFE 184
Query: 181 Y 181
+
Sbjct: 185 F 185
>gi|289451236|gb|ADC94150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira interrogans
serovar Hebdomadis]
Length = 186
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++ + F D RG+F +T+ + + ++ + F QDNHS S G +RG+H Q PP
Sbjct: 8 IEGPVLIEPKVFGDERGFFLETFKASIFEKENIPFQFSQDNHSRSSR-GVLRGMHLQIPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G++ D+ VD+R SP YG W+S+E+S N ++P GFAHGF+TLE
Sbjct: 67 YDQGKLVRVVRGKVIDVVVDVRVGSPNYGKWLSVELSEENKNIFWVPPGFAHGFLTLEDK 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T+ +YKVT YS +++ G+ W D ++ I W L VS++DQ PF SPF Y
Sbjct: 127 TDFLYKVTGEYSPQNEVGIRWDDPALGIPWKTWLSDSEFIVSQRDQVTPFFADFKSPFVY 186
>gi|50982342|gb|AAT91795.1| putative dTDP-L-rhamnose processing protein [Yersinia
enterocolitica]
Length = 182
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
NI V+I++ F D RG+F + + + +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 NIPDVKIIEPTVFGDDRGFFMEIWQKQKFEELVTGYPCDFVQDNHSKS-SKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR I+G ++D+AVDIRR+S T+G WV + +SA N Q++IP GFAHGF
Sbjct: 66 -SVNTQGKLVRVISGEVYDVAVDIRRDSETFGQWVGIYLSAENRRQLWIPKGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y+ + ++W D S+DI WPL+D P +S+KDQN L++ S
Sbjct: 125 SPVAEFVYKCTDYYNPAFEYSISWNDPSLDINWPLIDP--PILSDKDQNGLSLDKFIS 180
>gi|161869080|ref|YP_001598246.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
053442]
gi|161594633|gb|ABX72293.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
053442]
Length = 185
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKS-GKGVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|87303233|ref|ZP_01086026.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Synechococcus sp. WH
5701]
gi|87282128|gb|EAQ74089.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Synechococcus sp. WH
5701]
Length = 191
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V + + + F D RG+F +T +L E G+ VQ N S S G +RGLH+Q
Sbjct: 7 SIPEVLLFQPKVFGDERGFFVETARQSVLDEAGIP-PLVQHNQSRSRC-GVLRGLHYQ-L 63
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVRC G +FD+AVD+RR S T+G WV + + Q+++P GFAHGF+ L
Sbjct: 64 VQTQGKLVRCSRGAVFDVAVDVRRGSATFGQWVGAILDDVSHHQLWVPPGFAHGFLVLSE 123
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQ 174
+ Y +D+Y + G+AW D + I WP L D + +S KD P L Q
Sbjct: 124 VADFCYLCSDYYHPPSEQGIAWDDPELGIAWPDLPDGVEAQLSAKDLVNPRLAQ 177
>gi|1098480|gb|AAC37051.1| rfbC [Neisseria meningitidis]
Length = 333
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKS-GKGVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G WV +SA N Q++IP GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWVGEILSAQNQCQLWIPEGFAHGFCVLGDA 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P +S KD Q S
Sbjct: 131 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKAWAQAKS 183
>gi|187935603|ref|YP_001887438.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum B str.
Eklund 17B]
gi|187723756|gb|ACD24977.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum B str.
Eklund 17B]
Length = 179
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ + F D RGWF +TYS +K + F+QDN S+S + G +RG+HFQ
Sbjct: 7 KLDGVYIVEPQVFGDERGWFMETYSK--IKTPEIACDFIQDNQSYSKEKGILRGIHFQNG 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVRC+ G + D+AVD+R+NSPTY WV++E+SA N Q++IP GF HGF+TL
Sbjct: 65 KHAQAKLVRCVRGAVLDVAVDLRKNSPTYKQWVAVELSAENKKQLFIPRGFGHGFVTLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ E +YK ++Y+ E D + + D I + W + + P +SEKD+ P L D F
Sbjct: 125 DVEFVYKTDNYYNHESDRSIRFNDPEIGVEWGIKN---PILSEKDKKAPLLKDSDCIF 179
>gi|282881317|ref|ZP_06289997.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella timonensis CRIS
5C-B1]
gi|281304793|gb|EFA96873.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella timonensis CRIS
5C-B1]
Length = 184
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 71/182 (39%), Positives = 111/182 (60%), Gaps = 5/182 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + F D+RG+F + + + F+QDN S S G +RGLH+Q+
Sbjct: 8 IQGVWIIEPKVFNDARGYFFEAWKQAEFNAHIGEVNFIQDNESQSSY-GVLRGLHYQKGA 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+QAKLVR I G + D+AVD+R++SPT+G V++E+SA+N Q++IP GFAHGF+ L
Sbjct: 67 YSQAKLVRVIQGSVLDVAVDLRKSSPTFGKHVAVELSADNKRQLFIPRGFAHGFLVLSQE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YKV + Y+ +H++G+ W D+ ++I WPL D SEKD N + + ++
Sbjct: 127 AIFTYKVDNVYAPQHEAGIRWNDEDLNIQWPL-DPACFITSEKDLNACSFREAE---VFE 182
Query: 183 GL 184
+
Sbjct: 183 DI 184
>gi|271499224|ref|YP_003332249.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii Ech586]
gi|270342779|gb|ACZ75544.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii Ech586]
Length = 183
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
NI V+I++ F D RG+F +T+ K ++L G FVQDNHS S + +RGLH Q
Sbjct: 7 NIPDVKIIEPTVFGDERGFFMETWQQKKFEDLVVGHACSFVQDNHSKS-NKNILRGLHIQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVD+R++S T G WV + +SA N Q++IP GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDVRKDSATLGKWVGVYLSAENKRQLWIPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y + + W D +DI WPLL+ P +S+KD+ +
Sbjct: 125 SEEAEFVYKCTNYYHPASEISILWSDSFLDIHWPLLNNQEPLLSDKDKKGMSFEKF 180
>gi|307303497|ref|ZP_07583251.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti
BL225C]
gi|306902888|gb|EFN33480.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti
BL225C]
Length = 187
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 122/181 (67%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V + R+ D RG+FS+TY+++ L G+ +FVQDNHS+S GT+RGLH+Q
Sbjct: 7 LGLDGVLEIVPRRLGDERGFFSETYNAETLAAHGVAAIFVQDNHSYSAAAGTLRGLHYQL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQAKLVR + GR+FD+ VDIR+ SPT+ WV+LE+SA QI +P GFAHG +TLE
Sbjct: 67 PPKAQAKLVRVVRGRVFDVVVDIRKGSPTFAKWVALELSAEKWNQILVPVGFAHGLVTLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
TEV+YKVT+ YS EH+ + + D I I WP T +S KD+N P L++ FE
Sbjct: 127 PETEVLYKVTEHYSAEHERSIRYDDPEIGIGWP-AATDRLQLSAKDRNAPLLHE-SILFE 184
Query: 181 Y 181
+
Sbjct: 185 F 185
>gi|254673889|emb|CBA09672.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
alpha275]
Length = 180
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFKDGRGFFMETFRDGWFKENIADCSFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWTGATLSAQNQYQLWIPEGFAHGFYVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 126 AEVVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|218131068|ref|ZP_03459872.1| hypothetical protein BACEGG_02672 [Bacteroides eggerthii DSM 20697]
gi|217986772|gb|EEC53105.1| hypothetical protein BACEGG_02672 [Bacteroides eggerthii DSM 20697]
Length = 182
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D+RG+F + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIEGVWIIEPKVFNDARGYFMEAFKEGEFRANIGNVHFVQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G++ D+AVD+R++SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGKVLDVAVDLRQSSPTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ E ++ + + D+++ I WP+ ++ L +SEKD + +
Sbjct: 126 EAIFTYKVDNGYAPEAEASIRFNDETVGIDWPVAESQL-LLSEKDGHAVSFKDAE 179
>gi|324325334|gb|ADY20594.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 181
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFGDGRGFFTESYNKKVLETLGITYSFVQDNVSYSAEAGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFRQWRGYILSADNHRQLLVPKGFAHGFCTLVSHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSANHDSGVLWSDKELAIPWPV---TSPILSDKDRILPSLQECEDSF 181
>gi|260856021|ref|YP_003229912.1| putative dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli
O26:H11 str. 11368]
gi|24417733|gb|AAN60457.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
gi|56800699|gb|AAW31113.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
gi|77737732|gb|ABB01684.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
gi|257754670|dbj|BAI26172.1| predicted dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli
O26:H11 str. 11368]
Length = 180
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 76/172 (44%), Positives = 108/172 (62%), Gaps = 5/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y E + + W D + I WP +SEKD+ +
Sbjct: 126 EIAEFVYKTTNYYHPESEGCIKWDDSFLMIDWPNKPIA---ISEKDKKGSSI 174
>gi|119775372|ref|YP_928112.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella amazonensis SB2B]
gi|119767872|gb|ABM00443.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella amazonensis SB2B]
Length = 176
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 76/170 (44%), Positives = 101/170 (59%), Gaps = 4/170 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
IN V+++ FED RG+F +++ + EL FVQDN S S GT+RGLH+Q
Sbjct: 8 INEVKLIIPSVFEDERGYFFESWQQQRFAELVAPVTFVQDNQSLSKR-GTLRGLHWQ-EA 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KL+ ++G IFD+AVDIR SPTYG WV +SA N Q++IP GFAHGF L +
Sbjct: 66 HPQDKLISVLSGTIFDVAVDIRPESPTYGKWVGETLSAENHRQLFIPKGFAHGFYVLSES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
V YK +DFY E + + W D S+ I WP+ LP +S KD P
Sbjct: 126 AIVSYKCSDFYHPEDERSIRWDDPSLAIQWPIEG--LPLLSAKDAMAPLF 173
>gi|298484051|ref|ZP_07002220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
gi|295084261|emb|CBK65784.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides xylanisolvens
XB1A]
gi|298269832|gb|EFI11424.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
Length = 182
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D RG+F + Y + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFSDERGYFMEAYKKEEFDANIGPVDFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR + G++ D+AVD+R++SPT+G + + +S N Q +IP GFAHGF L
Sbjct: 66 EYSQAKLVRVLKGKVLDVAVDLRKSSPTFGKHICVLLSEENKRQFFIPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D+++ I WPL D+ + +S KD+
Sbjct: 126 EAVFTYKVDNKYAPQAEASILYNDETLGIDWPLADSQM-VLSAKDREGTAFKDA 178
>gi|156304228|ref|XP_001617513.1| hypothetical protein NEMVEDRAFT_v1g226019 [Nematostella vectensis]
gi|156194287|gb|EDO25413.1| predicted protein [Nematostella vectensis]
Length = 194
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
NI V+I++ + D RG+F +T++ K +E+ G FVQDNHS S G +RGLH+Q
Sbjct: 7 NIPDVKIIEPTVYGDERGFFMETWNQKQFEEMVTGKPTSFVQDNHSKS-RKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR I+G +FD+AVDIR +SPT+G WV +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVISGEVFDVAVDIREDSPTFGKWVGEYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ E +YK TDFY+ + + W D + I WPL P ++ KD N N
Sbjct: 125 SEDAEFVYKCTDFYNPNAEHSIVWNDPDLAINWPLDVGGQPRLANKDLNGELFNSA 180
>gi|325928551|ref|ZP_08189739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas perforans 91-118]
gi|325541090|gb|EGD12644.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas perforans 91-118]
Length = 174
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 8 ILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAK 67
+++ F D RG+F +T++++ + GL FVQ N S S G +RGLH+Q P Q K
Sbjct: 2 VIEPAVFGDERGYFFETWNAERFGQHGLPTKFVQSNVSTSAK-GVLRGLHYQWPR-PQGK 59
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
LV + G ++D+AVD+R SP +G W ++ +SA N Q +IP GFAHGF L Y
Sbjct: 60 LVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFAVLSERAVFSY 119
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLPLL 187
TD Y E D+GV W D +I I WP+ + P +S KD PFL + + + LP+
Sbjct: 120 LCTDVYVKEADAGVRWDDAAIGIDWPISN---PLLSAKDSAAPFLGDVPA----ERLPVY 172
Query: 188 SL 189
+
Sbjct: 173 TP 174
>gi|154253743|ref|YP_001414567.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parvibaculum lavamentivorans
DS-1]
gi|154157693|gb|ABS64910.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parvibaculum lavamentivorans
DS-1]
Length = 189
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+++ + + D RG+F++TYS + E+G+ FVQDN S++ GTIRGLHFQRP
Sbjct: 8 SIPEVKVMTSSRAIDGRGFFAETYSRRDFIEIGITADFVQDNESWNSAAGTIRGLHFQRP 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVR ++G I D+AVDIR SPTY V+LE+ A + QI+IP GFAHGF TL
Sbjct: 68 DFAQAKLVRVLSGAILDVAVDIRVGSPTYAQHVALELDAADNKQIFIPRGFAHGFCTLAP 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T V YKV +YS H+SG+ W D ++ I WP+ D+ +SEKD +LP +SPF +
Sbjct: 128 ATHVTYKVDAYYSEAHESGLLWNDPNLAIKWPV-DSAAAILSEKDADLPGFAAFESPFMF 186
Query: 182 D 182
+
Sbjct: 187 E 187
>gi|281418043|ref|ZP_06249063.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum
JW20]
gi|281409445|gb|EFB39703.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum
JW20]
Length = 183
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ + F D+RG+F ++Y+ K E GL FVQDNH S G +RG+HFQ
Sbjct: 11 IEGLVVVEPKIFTDTRGFFFESYNKKAFCEFGLTMEFVQDNHIKSRI-GVLRGIHFQ-RK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q +LVR I G+++D+AVD+R+NSPT+G W +E+SA N YIP F H F+TLE +
Sbjct: 69 FPQGRLVRVIKGKVYDVAVDLRKNSPTFGKWYGIELSAENKKMFYIPENFGHAFLTLEDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
TEV+ K T+ Y E +SG+ + D ++I WP ++ + +SEKD+NLP +
Sbjct: 129 TEVLCKTTNVYRPEFESGIIYNDPELNIDWPQIEGDI-VLSEKDKNLPTFKNAE 181
>gi|298481186|ref|ZP_06999380.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
gi|298272760|gb|EFI14327.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
Length = 189
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+PP
Sbjct: 8 IESVVIIEPRLFKDDRGYFFESFSQREFTEKVRKVDFVQDNESKSSY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ+KLVR I G + D+AVDIR+ SPT+G VS+E++ N Q +IP GFAHGF+ L
Sbjct: 67 YAQSKLVRVIKGSVLDVAVDIRKGSPTFGEHVSVELTERNHCQFFIPRGFAHGFVVLTEE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +FY+ + + +AW D ++ I W + + +SEKD++ L + F+Y+
Sbjct: 127 VIFQYKCDNFYAPQCEGALAWDDPALKIDWKVPADKI-ILSEKDKHHERLEEASWLFDYN 185
Query: 183 G 183
Sbjct: 186 E 186
>gi|329962830|ref|ZP_08300715.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fluxus YIT 12057]
gi|328529387|gb|EGF56300.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fluxus YIT 12057]
Length = 182
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
IN V +++ + F D+RG+F + + + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EINGVWLIEPKVFRDARGYFMEAFKEEEFRAHIGDVHFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR + GR+ D+AVD+RR+SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVLKGRVLDVAVDLRRSSPTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D++I I WP+ + L +SEKD +
Sbjct: 126 EAVFTYKVDNAYAPQAEASIRFNDETIGIEWPVAEEQL-LLSEKDGHAVSFKDA 178
>gi|220903819|ref|YP_002479131.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868118|gb|ACL48453.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 179
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 98/173 (56%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V ++K R + D RG+F +T+ + G+ FVQDNHS S G +RGLHFQ
Sbjct: 8 LAGVMLIKPRVWGDRRGYFVETWQHERYAAAGIDAAFVQDNHSMSTY-GILRGLHFQ-KT 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV GR+FD+AVDIR SPT+G W +E++ +N Q+++P G AHGF
Sbjct: 66 RPQGKLVSVSLGRVFDVAVDIRPGSPTFGQWYGVELTQDNQWQLWVPPGMAHGFAVTSQV 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK TD+Y E + G+ W D + + WP+ P +S+KD++ P +
Sbjct: 126 AHFHYKCTDYYCPEDEGGIRWNDPDLAVAWPV---AQPLLSDKDRHTPSWREF 175
>gi|325276928|ref|ZP_08142615.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas sp. TJI-51]
gi|324097943|gb|EGB96102.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas sp. TJI-51]
Length = 182
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I V + + F D RG+F ++Y++++ E+ GLQ FVQDNHS S G +RGLH+Q
Sbjct: 6 LDIPEVVLFTPKVFGDDRGFFYESYNARVFTEVTGLQPDFVQDNHSRS-VKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P+AQ KLVR I G +FD+AVDIRR+SPT+G WV +SA N Q++IP GFAHGF+TL
Sbjct: 65 LAPHAQGKLVRVIQGEVFDVAVDIRRSSPTFGKWVGAVLSAENKQQLWIPAGFAHGFVTL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN--LPFLNQI 175
E +YK TDFYS + + +AW D I I W P +S KDQ L ++
Sbjct: 125 SETAEFVYKTTDFYSAKSERCIAWDDPQIAIDWRFDG--QPQLSGKDQQGVALSLAEV 180
>gi|59710775|ref|YP_203551.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Vibrio fischeri ES114]
gi|59478876|gb|AAW84663.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Vibrio fischeri ES114]
Length = 185
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 75/178 (42%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I+K + F D RG+F +T+ S+ KE G+++ FVQDN S S +RGLHFQ+
Sbjct: 7 KLADCIIIKPKVFGDERGFFLETFHSQRYKEVAGIKEQFVQDNRSQSSK-NVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLV I+G +FD+AVD+R S T+G + ++ +S +N LQ Y+P GFAHGF L
Sbjct: 66 TK-PQGKLVTVISGEVFDVAVDLRPESETFGQYEAVVLSGDNKLQFYVPPGFAHGFCVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ + YK TD+Y + +SG+ W D I+I WPL P +SEKD+ P L++I++
Sbjct: 125 ESADFQYKCTDYYDPDDESGLLWSDPIINIQWPLK---TPLLSEKDKIQPLLSEIEAK 179
>gi|332884076|gb|EGK04356.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dysgonomonas mossii DSM
22836]
Length = 182
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V +++ + F D RG+F ++Y L E + F+QDN S S G +RGLH+Q
Sbjct: 7 SIKGVWVIEPKVFNDERGYFMESYKKNLFDEHIGKIDFIQDNESKS-TRGVLRGLHYQIG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR + G + D+ VD+R++SPT+G ++++E++ N Q+++P G AHGF+ L
Sbjct: 66 EYSQAKLVRALNGSVLDVVVDLRKSSPTFGEYLAVELTDENKKQLFMPRGIAHGFLVLSQ 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ H++ + W D S+ I W + D +S KD+ FL++
Sbjct: 126 EAVFSYKVDNVYAPAHEASLLWSDPSVAINWGI-DEKELILSPKDKAGKFLSEA 178
>gi|331004468|ref|ZP_08327939.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411035|gb|EGG90456.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lachnospiraceae oral taxon
107 str. F0167]
Length = 186
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 104/181 (57%), Gaps = 6/181 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ F+D RG+F +TY+ KE GL VFVQDN S S G +RGLHFQ
Sbjct: 10 EIEGLCVITPTVFKDDRGYFIETYNQNDFKEAGLDMVFVQDNESKSSR-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR ++G ++D+AVD+R+NS T+G + +S+ N Q YIP GFAHGF+ L
Sbjct: 68 EHPQGKLVRVLSGEVYDVAVDLRKNSKTFGKHFGVLLSSENKKQFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK TDFY + G+ + D I I WP+ + + +SEKD + + F +
Sbjct: 128 EAVFAYKCTDFYHPNDEGGIIYNDPDIGINWPI-EGMELIMSEKDTKWKGIKE---TFNF 183
Query: 182 D 182
D
Sbjct: 184 D 184
>gi|225023509|ref|ZP_03712701.1| hypothetical protein EIKCOROL_00367 [Eikenella corrodens ATCC
23834]
gi|224943749|gb|EEG24958.1| hypothetical protein EIKCOROL_00367 [Eikenella corrodens ATCC
23834]
Length = 180
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+I++ D RG+F +T+ +E F+Q+NHS S + G +RGLH+Q
Sbjct: 8 LPDVKIIEPEVHGDERGFFMETFRDNWFREHIGHHTFMQENHSRS-EHGVLRGLHYQ-TV 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR +AG +FD+AVD+RR+SPT+G WV +SA N Q++IP GFAHGF T + +
Sbjct: 66 CPQGKLVRVVAGSVFDVAVDLRRSSPTFGHWVGAVLSAENRYQMWIPPGFAHGFYTTDSH 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+++YK T++Y +H+ + W D ++ I WPL P +S KD L Q
Sbjct: 126 ADIVYKCTNYYQPDHEHTLFWHDPAVGIDWPL--AAPPLLSGKDAAGSLLAQA 176
>gi|84386939|ref|ZP_00989963.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio splendidus
12B01]
gi|84378229|gb|EAP95088.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio splendidus
12B01]
Length = 178
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ F D RG F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVKIIEPSVFGDERGLFMETWNQKQFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIR+ SPT+G W+ +SA N Q+++P GFAHGF
Sbjct: 67 ENT-QGKLVRVVSGEVFDVAVDIRKGSPTFGQWIGEYLSAENKRQLWVPEGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + +AW D ++ I WPL T P +S+KD+ Q+
Sbjct: 126 DEAEFVYKCTDYYNPQAEISIAWDDDTLRIDWPL--TSPPRLSDKDRQGLLFEQL 178
>gi|269793219|ref|YP_003318123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100854|gb|ACZ19841.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 186
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 7/185 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ + ++ F DSRG+F QT+ ++ ++ G+ + FVQDN S S GT+RGLH+Q
Sbjct: 6 LSLPGLLHIEPVFFGDSRGYFLQTWQARQYRDAGISEFFVQDNLSLSRK-GTLRGLHYQ- 63
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV + G ++D+AVD+R SPT+G W + + Q+YIP GFAHGF +
Sbjct: 64 KPNTQGKLVFVLKGEVWDVAVDLRVGSPTFGKWEGVTLKGQTHNQLYIPPGFAHGFCVIS 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSP 178
YK TDFY+ +++ G+ W D +DI WP+ D P +S KD P L I +S
Sbjct: 124 DEALFTYKCTDFYAPQNEHGIIWNDPDLDIPWPVKD---PILSAKDGRYPRLRDIPGESL 180
Query: 179 FEYDG 183
F ++G
Sbjct: 181 FRWEG 185
>gi|86144024|ref|ZP_01062362.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leeuwenhoekiella blandensis
MED217]
gi|85829484|gb|EAQ47948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leeuwenhoekiella blandensis
MED217]
Length = 178
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ IL+ R F+D RG+F ++++ K +EL G FVQDN SFS G IRG+HFQ+
Sbjct: 8 LKGCFILEPRVFKDDRGYFFESFNQKTFEELVGQPVHFVQDNQSFS-QYGVIRGIHFQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVR + G + D+AVD+R SPTYG V+++++A N Q+++P GF HGF L
Sbjct: 67 AHAQAKLVRVLEGEVLDVAVDLREGSPTYGQHVAVKLNAENNRQLFVPRGFGHGFSVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK ++Y + G+ + D ++ I W + + + VSEKD L
Sbjct: 127 TAVFAYKCDNYYHKASEGGIVYNDPTLAIDWGIPEEKI-QVSEKDLVLEHFKN 178
>gi|312142996|ref|YP_003994442.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Halanaerobium sp.
'sapolanicus']
gi|311903647|gb|ADQ14088.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Halanaerobium sp.
'sapolanicus']
Length = 183
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + IL F D RGWF ++YS K +ELG+ F+QDN+S+S G +RGLHFQ
Sbjct: 7 KIQGLYILSADVFADQRGWFMESYSLKKFRELGIDINFIQDNYSYSKKRGVLRGLHFQTE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ+KLVRCI GRI DIAVD+R+ S TY + +S N Q+ IP GFAHGF+ LE
Sbjct: 67 PKAQSKLVRCIKGRILDIAVDLRKESLTYKKHCKVLLSQKNKKQLLIPKGFAHGFICLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
TEV YKV ++Y EH+ + + D ++I W + + +S KD+N P L ++
Sbjct: 127 ETEVYYKVDEYYFPEHEKSIFYNDPELNIDWEIEN---VILSNKDKNAPLLKDLE 178
>gi|325108167|ref|YP_004269235.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Planctomyces brasiliensis DSM
5305]
gi|324968435|gb|ADY59213.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Planctomyces brasiliensis DSM
5305]
Length = 180
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ++ D RG+F + Y E FVQDN+S S GT+RGLH+Q
Sbjct: 8 IADCLLITPAIHGDERGFFMEIYQQNRYAEEAKLPDFVQDNYSRSVQ-GTLRGLHYQ-LE 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLV+ I G +FD+AVD+RR SPT+G V++ ++ Q Y+P G AHGF + +
Sbjct: 66 QAQGKLVQVIRGEVFDVAVDLRRKSPTFGKHVAVRLNDQTRQQFYVPPGCAHGFYVVSES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ +YK TDFY + + W D I I WP+ + P +S KDQ +
Sbjct: 126 ADFLYKCTDFYHPASERTLQWNDPEIGIDWPVEEE--PILSAKDQAGVSFADCEKY 179
>gi|114563991|ref|YP_751505.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella frigidimarina
NCIMB 400]
gi|114335284|gb|ABI72666.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella frigidimarina
NCIMB 400]
Length = 182
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 76/167 (45%), Positives = 107/167 (64%), Gaps = 6/167 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ F D RG+F +T+S + +EL G FVQDNHS S G +RGLH+Q
Sbjct: 8 IADVKIIEPAVFGDERGFFMETWSQQKFEELVTGKPTKFVQDNHSKS-KKGILRGLHYQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIR+ SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 67 KNT-QGKLVRVVSGEVFDVAVDIRKGSPTFGQWVGVYLSAENKRQLWVPEGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ 167
E +YK TD+Y+ + + +AW D I I WP+ +T P +SEKD+
Sbjct: 126 EEAEFVYKCTDYYNPKAELSIAWNDSDIGIKWPISNT--PLLSEKDK 170
>gi|261391624|emb|CAX49066.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase; dTDP-L-rhamnose synthetase) [Neisseria
meningitidis 8013]
Length = 179
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFKDGRGFFMETFRDGWFKENIADCSFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWTGATLSAQNQYQLWIPEGFAHGFYVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 126 AEVVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|224823815|ref|ZP_03696924.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lutiella nitroferrum 2002]
gi|224604270|gb|EEG10444.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lutiella nitroferrum 2002]
Length = 181
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 115/173 (66%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ + F D RG+F ++++ K +E G Q FVQDNHS S G +RGLH+Q P
Sbjct: 8 IPDVKIIEPQVFGDERGFFYESFNHKQFEEAIGQQVKFVQDNHSRS-VKGVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVRC G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 67 PHAQAKLVRCAVGEVFDVAVDIRKSSPTFGQWVGVNLSAENKRQLWIPEGFAHGFLTLSK 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK TD+Y+ E + + W D+++ I WP P++S+KD N
Sbjct: 127 VAEFLYKTTDYYAPESERCINWNDQNLSIKWPT--GFDPTLSKKDNNGLAFTD 177
>gi|224539908|ref|ZP_03680447.1| hypothetical protein BACCELL_04819 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518462|gb|EEF87567.1| hypothetical protein BACCELL_04819 [Bacteroides cellulosilyticus
DSM 14838]
Length = 182
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 68/179 (37%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + D RG+F + + + K F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVLRDERGYFMEAFKEEEFKMHIGDVHFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q+KLVR I G++ D+AVD+R++SPT+G +VS E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYCQSKLVRVIKGKVLDVAVDLRQSSPTFGKYVSAELSEENQRQFFIPRGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
IYKV + Y + ++ + + D++I I WP+ + L +S KD+ P + FE
Sbjct: 126 EAIFIYKVDNAYVPQAEASIRFNDETIGIEWPIAEEQL-LLSPKDKTAPSFRDA-TYFE 182
>gi|297199641|ref|ZP_06917038.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sviceus ATCC
29083]
gi|197713431|gb|EDY57465.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sviceus ATCC
29083]
Length = 197
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ + + + F D RG F + + + + E G Q N S S GT+RG+HF
Sbjct: 4 LSISGAWVFEPKVFPDGRGSFHEWFKAPVFAEAAGHSLGLAQANMSVS-SRGTLRGIHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V+C+ G + D+ VDIR SPT+G W + + + +Y+ G HGFM L
Sbjct: 63 DVPPGQAKYVKCVRGAVLDVIVDIRVGSPTFGQWEIVRLDDQDHHAVYLSEGLGHGFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V+Y ++ Y+ E + G+ D I I WP D + P +S KD+ P L +
Sbjct: 123 TDDATVVYLCSEGYAPEREHGIHPLDPEIGIEWP--DGVAPLLSPKDEQAPTLAEA 176
>gi|253563189|ref|ZP_04840646.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
gi|265762927|ref|ZP_06091495.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
gi|251946965|gb|EES87247.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
gi|263255535|gb|EEZ26881.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
Length = 191
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 73/180 (40%), Positives = 107/180 (59%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ R F D RG+F ++++ + E + +FVQDN S S G IRGLHFQ+P
Sbjct: 7 DIKSVVIIEPRLFRDERGYFFESFNQNVFIEKVCKTMFVQDNESKSSY-GVIRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + G + D+AVDIR+ SPT+G +S+E++ +N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVVKGAVLDVAVDIRKGSPTFGKHISVELTEDNHRQFFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY+ + + +AW D + I W + +SEKD L F+Y
Sbjct: 126 EVVFQYKCDNFYAPQCEGAIAWDDPDLGIDWKIP-MEEVILSEKDSCHSALKDAAWLFDY 184
>gi|307728805|ref|YP_003906029.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1003]
gi|307583340|gb|ADN56738.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1003]
Length = 183
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 68/176 (38%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E D FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFYESFNAREFAEKVQPDVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR G +FD+AVDIR++SP +G W + +S +N Q++IP GFAHGF+ L
Sbjct: 68 QHAQGKLVRVTEGDVFDVAVDIRKSSPNFGKWEGVVLSGDNHRQLWIPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EH+ + W D +I + WP+ P ++ KD L++ +
Sbjct: 128 TAQFLYKTTDYWYPEHERSIVWNDPAIGVEWPI--DFEPVLAAKDAAGKRLSEAEC 181
>gi|225873478|ref|YP_002754937.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium capsulatum
ATCC 51196]
gi|225794039|gb|ACO34129.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium capsulatum
ATCC 51196]
Length = 181
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ R F D RG F +T++ + + E GL + QDN S S +RG+H+Q
Sbjct: 8 LPEVLVIRPRIFRDDRGSFWETWNERTIAEAGLPAEWKQDNTSVSKK-NVVRGIHYQILQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR AGRI D+AVD+RR+SP +G +++E+S ++ ++IP GF H F+ L +
Sbjct: 67 -PQGKLVRAAAGRILDVAVDLRRSSPNFGKHIAVELSGDDSAMLWIPVGFGHAFVALTDD 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V YKVTD+YS + + W D I I WP+ VS KD + L +
Sbjct: 126 ARVAYKVTDYYSPAGERTILWNDPQIGIDWPVR-ADEAIVSAKDADGKRLADAE 178
>gi|284035367|ref|YP_003385297.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirosoma linguale DSM 74]
gi|283814660|gb|ADB36498.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Spirosoma linguale DSM 74]
Length = 181
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 76/174 (43%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + L R FED RG F ++Y+ L + LGL FVQDN SFS G +RGLH Q
Sbjct: 7 SIQGLIELTPRVFEDERGHFFESYNKPLFESLGLPMDFVQDNQSFS-TKGVLRGLHMQNQ 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR I+G++ DIAVD+R +SPT+G + + + A YIP GFAHGF+ LE
Sbjct: 66 PFAQGKLVRVISGQVLDIAVDLRPDSPTFGQYEAFLLDAKRANMAYIPEGFAHGFVALED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T+ Y+ +SG+ W D ++I W + + P VSEKD+ L ++
Sbjct: 126 -SVFSYKCTNVYNKAAESGIIWNDPDLNIDWGIAN---PIVSEKDKELKLFREV 175
>gi|83814948|ref|YP_444733.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinibacter ruber DSM 13855]
gi|83756342|gb|ABC44455.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinibacter ruber DSM 13855]
Length = 186
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ VR+++ + D RG F++ ++ + GL FVQDN S S + G +RGLHFQ P
Sbjct: 7 SLPGVRLIEPDVYTDDRGSFAELWNVRDYGHHGLDVTFVQDNLSRSRE-GVLRGLHFQNP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+ + G ++D+ VD+R + T+G W +SA N Q+Y+P G+AHGF+
Sbjct: 66 R-AQGKLISVLEGAVYDVVVDVRAGADTFGAWEGQVLSAENARQLYVPEGYAHGFVATSG 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK TDFY E D V W D ++ I WP D P +SEKD P L++I
Sbjct: 125 EVLFHYKCTDFYHPEADRTVRWDDPALGIDWPTED---PILSEKDAGAPALDEIP 176
>gi|257468057|ref|ZP_05632153.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC
49185]
gi|317062343|ref|ZP_07926828.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC
49185]
gi|313688019|gb|EFS24854.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC
49185]
Length = 475
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 115/194 (59%), Gaps = 6/194 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+N+ + I++ FEDSRG+F ++Y+ +++G+ F+QDNHS S GT+RGLHFQ
Sbjct: 9 INLQGIYIIEPLVFEDSRGFFLESYNKAEFEKIGITTNFIQDNHSKSKK-GTLRGLHFQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++QAKL+R I G+I DI VDIR+ S TYG W E+SA N +YI GFAHGF+ LE
Sbjct: 68 -KHSQAKLIRVIKGKILDIVVDIRKGSSTYGKWCGTELSAENRKMLYIAKGFAHGFLALE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQID 176
+TE+ YK ++Y+ +DSG+ W DK I I W +SEKD+ +
Sbjct: 127 DDTEIEYKCDEYYAPHYDSGIMWNDKDIAIDWNFEKNGLKEENIILSEKDKKHQSFKEYT 186
Query: 177 SPFEYDGLPLLSLN 190
+ + + L +
Sbjct: 187 EKYSGENVLLTGAD 200
>gi|148549129|ref|YP_001269231.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida F1]
gi|148513187|gb|ABQ80047.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida F1]
Length = 181
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + + F D RG+F ++++ K+ +E+ G FVQDNHS S G +RGLH+Q
Sbjct: 6 LAIPDVVLFEPKVFGDQRGFFYESFNQKVFEEVVGRSVTFVQDNHSKSVK-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+AQ KLVR G +FD+AVD+R++SPT+G WV +S+ N Q++IP GFAHGF+ L
Sbjct: 65 I-KHAQGKLVRVTHGEVFDVAVDLRKSSPTFGQWVGAHLSSTNQHQLWIPEGFAHGFVVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+++ + + +AW D ++ I WP D P++S KD L +
Sbjct: 124 SETAEFLYKTTDYWAPKFERSLAWNDPTVAIEWPYTD--APTLSAKDDIAALLQDAE 178
>gi|227113156|ref|ZP_03826812.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 178
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ +I++ + F D+RG+F +T+ K ++ L + FVQDNHS S G +RGLHFQ+
Sbjct: 7 KIHGAKIIQPKVFGDARGFFLETFEKKRYQQMLNIDVDFVQDNHSRSGK-GVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLV + G +FD+AVDIR SPTYG W + +S N Q ++P G AHGF L
Sbjct: 66 TK-PQGKLVHVVRGEVFDVAVDIRPGSPTYGVWEGVILSEENKTQFWLPPGLAHGFAVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y + + W D I I WP+ P +SEKD+ +
Sbjct: 125 DIADFEYKCTDYYDPSDEGCLLWNDPEIGIEWPIS---SPLLSEKDKLGKLFKDL 176
>gi|160881796|ref|YP_001560764.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium phytofermentans
ISDg]
gi|160430462|gb|ABX44025.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium phytofermentans
ISDg]
Length = 182
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + +++ F+D+RG+F +TY + + G+ F+QDN S S G +RGLHFQ
Sbjct: 11 IDGLFVIEPTIFKDNRGYFIETYHKEAYEAAGITAEFIQDNQSMSKK-GVLRGLHFQI-N 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y QAKLVR ++G +FD+AVD+R+ S T+G W + +S N Q ++P GFAHG++ L
Sbjct: 69 YPQAKLVRVLSGEVFDVAVDLRKGSKTFGKWYGVVLSEENQKQFFVPEGFAHGYLVLSDT 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK TDFY D G+ W D + I WP+ + + ++++DQ L I
Sbjct: 129 AVFAYKCTDFYHPGDDGGLLWNDPEVGIEWPIPEDMDLVIAQRDQEWGTLADIK 182
>gi|89073289|ref|ZP_01159819.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Photobacterium sp.
SKA34]
gi|89050999|gb|EAR56463.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Photobacterium sp.
SKA34]
Length = 183
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE--LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V+I++ F D RG+F +T++ K +E G FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVKIIEPSVFGDERGFFMETWNQKKFEELVAGRPTRFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++S T+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSATFGRWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E +YK TD+Y+ + + W D + I WP+ + VSEKD+ + +
Sbjct: 125 SDEAEFVYKCTDYYNPSAEHSILWNDNYLKIEWPIEGEV--IVSEKDKAGNYFDD 177
>gi|115279744|gb|ABI85360.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 183
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 76/177 (42%), Positives = 112/177 (63%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVLGDERGFFMETWNQKRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + ++W D ++ITWP + P +SEKD+N L++I
Sbjct: 125 SDEAEFVYKCTDYYNPTAEISLSWDDPDLEITWPNFN-QSPILSEKDKNPISLDKIK 180
>gi|317477045|ref|ZP_07936287.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides eggerthii
1_2_48FAA]
gi|316906838|gb|EFV28550.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides eggerthii
1_2_48FAA]
Length = 182
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F D+RG+F + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIEGVWIIEPKVFNDARGYFMEAFKEGEFRANIGNVHFVQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G++ D+AVD+R++SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGKVLDVAVDLRQSSPTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ + ++ + + D+++ I WP+ ++ L +SEKD + +
Sbjct: 126 EAIFTYKVDNGYAPQAEASIRFNDETVGIDWPVAESQL-LLSEKDGHAVSFKDAE 179
>gi|190150743|ref|YP_001969268.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307250739|ref|ZP_07532673.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307264145|ref|ZP_07545739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915874|gb|ACE62126.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306857243|gb|EFM89365.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306870519|gb|EFN02269.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 180
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + ++ FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLEPQVFGDERGFFMETFRDEWFRQNVADRTFVQENHSKS-IKGVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVQGAVFDVAVDLRKSSPTFGQWVGEVLSAENKRQLWVPEGFAHGFYVLTE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + + W D ++ I W L PS+S KD L
Sbjct: 125 TAEFTYKCTDYYNPKAEHSLIWNDPTVAIDWNLDGE--PSLSVKDLAGKVLADA 176
>gi|316983890|gb|EFV62869.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
H44/76]
gi|325133135|gb|EGC55806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis M6190]
gi|325135185|gb|EGC57810.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M13399]
gi|325141222|gb|EGC63721.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis CU385]
gi|325199289|gb|ADY94744.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
H44/76]
gi|325205165|gb|ADZ00618.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M04-240196]
Length = 185
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E +YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 126 AEFVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|315499263|ref|YP_004088067.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Asticcacaulis excentricus CB
48]
gi|315417275|gb|ADU13916.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Asticcacaulis excentricus CB
48]
Length = 180
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI + +L +KF D+RG+F + + + +E FVQDN S S GTIRGLH+Q+
Sbjct: 7 NIEGLALLTPKKFGDNRGYFMEAFKAAWFRESVADVTFVQDNQSLSGQVGTIRGLHYQKL 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLVRC+ G IFD+AVDIR S T+G WV ++ +N LQ++IP GFAHGF TLE
Sbjct: 67 PCGQGKLVRCLRGAIFDVAVDIRPESSTFGQWVGETLTPDNALQLWIPEGFAHGFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+TEV YKVT YS HD+G+A+ D I I WP+ D +S+KD+ P L+
Sbjct: 127 DTEVFYKVTSPYSPTHDAGLAFDDPEIGIEWPI-DLAAAVLSDKDKVQPKLS 177
>gi|16264649|ref|NP_437441.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase protein
[Sinorhizobium meliloti 1021]
gi|1890602|emb|CAB01950.1| ExpA8 [Sinorhizobium meliloti]
gi|15140787|emb|CAC49301.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase protein WgaH
(formerly ExpA8) [Sinorhizobium meliloti 1021]
Length = 187
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 86/181 (47%), Positives = 122/181 (67%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ V + R+ D RG+FS+TY+++ L G+ +FVQDNHS+S GT+RGLH+Q
Sbjct: 7 LGLDGVLEIVPRRLGDERGFFSETYNAETLAAHGVAAIFVQDNHSYSAAAGTLRGLHYQL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQAKLVR + GR+FD+ VDIR+ SPT+ WV+LE+SA QI +P GFAHG +TL+
Sbjct: 67 PPKAQAKLVRVVRGRVFDVVVDIRKGSPTFAKWVALELSAEKWNQILVPVGFAHGLVTLD 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
TEV+YKV++ YS EH+ + + D I I WP T +S KD+N P L++ FE
Sbjct: 127 PETEVLYKVSEHYSAEHERSIRYDDPEIGIGWP-AATDRLQLSAKDRNAPLLHE-SILFE 184
Query: 181 Y 181
+
Sbjct: 185 F 185
>gi|107021949|ref|YP_620276.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia AU
1054]
gi|116688896|ref|YP_834519.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
HI2424]
gi|170732197|ref|YP_001764144.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
MC0-3]
gi|105892138|gb|ABF75303.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia AU
1054]
gi|116646985|gb|ABK07626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
HI2424]
gi|169815439|gb|ACA90022.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
MC0-3]
Length = 183
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++ K E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFYESFNGKEFAEQVAPGVEFVQDNHSRSSK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +S +N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRKDSPNFGKWVGVVLSNDNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L++ +
Sbjct: 128 AAQFLYKTTDYWFPEHERSIVWNDPEIGIEWPI--DFEPLLAAKDAAGKRLSEAE 180
>gi|163939116|ref|YP_001644000.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus weihenstephanensis
KBAB4]
gi|163861313|gb|ABY42372.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus weihenstephanensis
KBAB4]
Length = 181
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R FED RG+F+++Y+ K+L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFEDERGFFTESYNKKMLESLGITHSFVQDNVSYSAHSGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKKWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSG+ W+DK + I WP+ + P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGLLWEDKELSIPWPVTN---PILSDKDRILPLLQEYEDSF 181
>gi|238560602|gb|ACR46366.1| TDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces peucetius ATCC
27952]
Length = 199
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + + + F DSRG F + + + + G Q N S S GT+RG+HF
Sbjct: 4 LSIAGAWVHEPKIFPDSRGSFHEWFRAPEFTEAAGHGLNLAQANCSVS-SRGTLRGIHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V+C+ G + D+ VDIR SPT+G W ++ + + +Y+ G H FM L
Sbjct: 63 DVPPSQAKYVKCVRGAVLDVIVDIRVGSPTFGQWEAVRLDDADHHSVYLSEGLGHAFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y ++ YS + G+ D + I WP + I P +SEKD+ P L +
Sbjct: 123 TDDATVVYLCSEGYSPGREHGITPLDPELGIEWP--EGITPLLSEKDEAAPTLAEAK 177
>gi|117919830|ref|YP_869022.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. ANA-3]
gi|117612162|gb|ABK47616.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. ANA-3]
Length = 183
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 108/176 (61%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V++++ + F D RG+F +T++ K + L G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKVIEPKVFGDERGFFMETWNQKQFENLVTGKSTTFVQDNHSKS-KRGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR I+G +FD+AVDIR++SPT+G WV +SA N Q++IP GFAHGF +
Sbjct: 66 TKDT-QGKLVRVISGEVFDVAVDIRKDSPTFGQWVGEYLSAENKRQLWIPEGFAHGFYVI 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T +Y+ ++ + W D ++ I WP+ +T +S KD N ++I
Sbjct: 125 SNECEFVYKCTKYYNPNYEKCLIWNDSNLQIDWPIPETERVLLSSKDSNGIPFDKI 180
>gi|72132992|gb|AAZ66345.1| RmlC [Listonella anguillarum]
Length = 184
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/179 (42%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ + +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVKIIEPTVFGDERGFFMETWNQQRFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGKWVGVHLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVE---HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y+ E + + W D+SI+I WP + P +SEKD + L+ I
Sbjct: 125 SEEAEFVYKCTNYYNPEAEHDEHTLLWNDESINIDWP--NKTCPLLSEKDVHGKHLSDI 181
>gi|261391607|emb|CAX49045.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase; dTDP-L-rhamnose synthetase) [Neisseria
meningitidis 8013]
Length = 185
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFKDGRGFFMETFRDGWFKENIADCSFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWTGATLSAQNQYQLWIPEGFAHGFYVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y+ + + + W D ++ I WPL P++S KD Q +
Sbjct: 126 AEVVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKAWAQAEK 178
>gi|229056954|ref|ZP_04196349.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH603]
gi|228720343|gb|EEL71917.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH603]
Length = 181
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R FED RG+F+++Y+ K+L+ LG+ FVQDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFEDERGFFTESYNKKMLESLGITHSFVQDNVSYSAHSGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF T+ +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKKWRGYILSADNHRQLLVPKGFAHGFCTMVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSG+ W+DK + I WP+ + P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGLLWEDKELSIPWPVTN---PILSDKDRILPLLQEYEDSF 181
>gi|225025807|ref|ZP_03714999.1| hypothetical protein EUBHAL_00032 [Eubacterium hallii DSM 3353]
gi|224956891|gb|EEG38100.1| hypothetical protein EUBHAL_00032 [Eubacterium hallii DSM 3353]
Length = 203
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 103/196 (52%), Gaps = 21/196 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ DSRG+F +TY+ + E GL FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCIIEPTLHGDSRGYFMETYNKNDMAEAGLTMEFVQDNQSASTK-GVLRGLHFQ-KQ 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+ VD+R +S TYG W +SA N Q YIP GFAHGF+ L
Sbjct: 71 HPQGKLVRVINGTVFDVVVDLRSHSGTYGKWFGEILSAENNKQFYIPEGFAHGFLVLSDT 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK TDFY + G+AW D I I WP L D ++SEKD
Sbjct: 131 AEFCYKCTDFYHPGDEGGLAWNDPEIGIEWPELVGEYSGCATAKGYHLKDGTSLTLSEKD 190
Query: 167 QNLPFLNQIDSPFEYD 182
Q + + F++
Sbjct: 191 QKWLGIAE---TFKFK 203
>gi|319427033|gb|ADV55107.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella putrefaciens 200]
Length = 181
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 6/177 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I ++I++ F D RG+F +T++ K + L G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDIKIIEPTVFGDERGFFMETWNQKQFEVLVTGKPTTFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FD+AVDIR+NS T+G WV +SA+N Q++IP GFAHGF
Sbjct: 66 TENT-QGKLVRVVYGEVFDVAVDIRKNSSTFGQWVGEFLSADNKRQLWIPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y +E + + W D ++ I WP++ P +S KD+N +
Sbjct: 125 SDEAEFVYKCTNYYKLESEQSIRWNDNTLGIDWPIIGK--PVLSNKDKNACSFKEAK 179
>gi|330829239|ref|YP_004392191.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas veronii B565]
gi|328804375|gb|AEB49574.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas veronii B565]
Length = 183
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I + + F D RG+F ++++ KL +E G Q FVQDNHS S G +RGLH+Q P
Sbjct: 8 IPDVLIFEPKVFGDERGFFFESFNHKLFEEAVGYQVNFVQDNHSKS-SKGVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRC+AG +FD+AVDIR++SPT+G WV + +S N Q++IP GFAHGF+TL
Sbjct: 67 PNAQGKLVRCVAGEVFDVAVDIRKSSPTFGKWVGVHLSGENKRQLWIPEGFAHGFVTLTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y+ D G+AW D SI I WP L+ + + S KD L D
Sbjct: 127 TAEFLYKTTNYYAPVSDRGIAWNDASIGIKWPELNADILT-SAKDSTAKSLETAD 180
>gi|221134347|ref|ZP_03560652.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Glaciecola sp. HTCC2999]
Length = 179
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/171 (43%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ F D RG+F +T+ ++ +ELG+ FVQDN+S S G +RGLHFQ
Sbjct: 8 LPGVLIIEPAIFGDDRGFFKETFQAQRYRELGISQDFVQDNYSRSSY-GVLRGLHFQ-QQ 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLV C G +FD+ VDI S T+ VS+EIS N Q+YIP G+AHGF L
Sbjct: 66 YPQGKLVSCTHGSVFDVIVDIDPGSATFTQHVSIEISGENHRQVYIPPGYAHGFCVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ +YK TD+Y + ++G+ W D IDI WP+ I P++S KD L+
Sbjct: 126 ADFMYKCTDYYRPDDEAGILWNDPQIDIAWPI---IHPTLSPKDTVNMTLD 173
>gi|206601950|gb|EDZ38432.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Leptospirillum sp. Group II
'5-way CG']
Length = 183
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +++ +K LG+ +FVQDNHS S G +RGLHFQ
Sbjct: 8 IGGLLRIRPDVHGDERGFFLESFHAKKFAALGIPQLFVQDNHSRSAR-GVLRGLHFQ-KR 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR ++G +FD+AVD+R SPT+G W L +SA + +Y+P G AHGF+ LE
Sbjct: 66 HPQGKLVRVLSGSLFDVAVDLRHGSPTFGHWFGLTLSAGDPEFLYLPEGMAHGFLALEDR 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
TE+ YK TDFY + G+ W D +I I WP +S KD P L +I
Sbjct: 126 TELFYKCTDFYDPADEGGLRWNDPAIGIAWP---ERPSVLSPKDAAFPVLAEI 175
>gi|146293633|ref|YP_001184057.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella putrefaciens
CN-32]
gi|145565323|gb|ABP76258.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella putrefaciens
CN-32]
Length = 182
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/167 (48%), Positives = 114/167 (68%), Gaps = 4/167 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ + F D RG+F ++++ + + G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKIIEPKVFGDERGFFFESFNQQQFEAAVGYSVKFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PPYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP+GFAHGF+TL
Sbjct: 66 PPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGQWVGIHLSAENKRQLWIPSGFAHGFVTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ 167
E +YK T+FY+ + + + W D I I WPL+D PS+S KDQ
Sbjct: 126 ETAEFLYKTTNFYAPQSEGSICWDDTDIGIEWPLVDK--PSLSSKDQ 170
>gi|313496629|gb|ADR57995.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida BIRD-1]
Length = 181
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + F DSRG+F + ++++ ++ G+ FVQDNHS S G +RGLH+Q
Sbjct: 8 IPEVLIIEPKVFADSRGFFFEAFNAREFSQQTGVNVAFVQDNHSRSIK-GVLRGLHYQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G I DIAVD+R++SPT+G WV++ +SA+N Q++IP GFAHGF +
Sbjct: 67 NT-QGKLVRVVHGEIRDIAVDVRKSSPTFGKWVAVHLSADNHRQLWIPPGFAHGFAVMSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ D + W D +DI W L P +S+KD+ L + +
Sbjct: 126 SAEFLYKTTDYYNPGADRCIRWDDPQLDIDWGL--QQPPLLSDKDKVGLPLAEAE 178
>gi|212634444|ref|YP_002310969.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella piezotolerans WP3]
gi|212555928|gb|ACJ28382.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella piezotolerans WP3]
Length = 182
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/176 (46%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK----ELG-LQDVFVQDNHSFSFDCGTIRGLH 57
I V +++ + F D RG+F +TY K E G + FVQ+N S S +RGLH
Sbjct: 8 IADVLLIEPKVFGDERGFFMETYRESEFKILFAEAGLIAPHFVQENMSRSAKH-VLRGLH 66
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
FQ+ Q KL+R ++G IFD+AVDIR++S T+G WV +SANN LQ+YIP GFAHGF+
Sbjct: 67 FQKSK-PQGKLIRVVSGEIFDVAVDIRQDSATFGQWVGQVLSANNRLQMYIPPGFAHGFL 125
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
TL ++IYK TD+Y E + VAW D +I I WPL ++LP +S+KD L+
Sbjct: 126 TLSEYADIIYKCTDYYVPEDEGHVAWDDANIGIDWPLSKSVLPILSDKDSGSSKLS 181
>gi|242240691|ref|YP_002988872.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii Ech703]
gi|242132748|gb|ACS87050.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii Ech703]
Length = 185
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG--LQDVFVQDNHSFSFDCGTIRGLHFQR 60
I ++I++ F D RG+F +T+ K ++L FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDIKIIEPTVFGDERGFFMETWHQKRFEDLVTQRPCRFVQDNHSKS-RKGILRGLHYQ- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR IAG +FD+AVDIR+NSPT+G V + +SA N Q++IP GFAHGF
Sbjct: 66 TENPQGKLVRVIAGEVFDVAVDIRKNSPTFGQSVGVYLSAQNKRQLWIPAGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + W D+S++I WP+ + ++ +S KD+ I
Sbjct: 126 DEAEFVYKCTDYYNPNAEHCIIWNDESLNIDWPIENEMV-ILSAKDEQGKKFQDIP 180
>gi|240948933|ref|ZP_04753289.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus minor NM305]
gi|240296748|gb|EER47359.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus minor NM305]
Length = 180
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + K+ FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLEPQVFGDERGFFMETFRDEWFKQNVADRTFVQENHSKSIK-GVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVQGAVFDVAVDLRKSSPTFGQWVGEILSAENKRQLWVPEGFAHGFYVLTE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TD+Y+ + + + W D ++ I WPL P +S KD L++
Sbjct: 125 TAEFTYKCTDYYNPKAEHSLIWNDPTVGIEWPLDGE--PGLSVKDIAGKILSE 175
>gi|254973885|ref|ZP_05270357.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile
QCD-66c26]
gi|255091270|ref|ZP_05320748.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile CIP
107932]
gi|255312929|ref|ZP_05354512.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile
QCD-76w55]
gi|255515688|ref|ZP_05383364.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile
QCD-97b34]
gi|255648782|ref|ZP_05395684.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile
QCD-37x79]
gi|260682002|ref|YP_003213287.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile CD196]
gi|260685600|ref|YP_003216733.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile R20291]
gi|306518899|ref|ZP_07405246.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile
QCD-32g58]
gi|260208165|emb|CBA60479.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile CD196]
gi|260211616|emb|CBE01848.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile R20291]
Length = 185
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ F D RG+F ++Y+ K E GL F+QDN S S G +RG+HFQ
Sbjct: 10 KIEGLYIVEPNVFCDERGYFMESYNKKDFIEQGLDMCFIQDNES-SSRKGVLRGMHFQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR G +FD+AVD+R++S T+G W + +S N Q YIP GFAHGF+ L
Sbjct: 68 RYPQGKLVRVTEGEVFDVAVDLRKDSQTFGKWEGVILSDKNKKQFYIPEGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK T++Y E + G W DK I I WPL +SEKD+ I
Sbjct: 128 KAVFNYKCTNYYYPEFEHGFIWNDKQISIEWPLKGIEEIFLSEKDKKQKSFKDI 181
>gi|307564467|ref|ZP_07627008.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella amnii CRIS 21A-A]
gi|307346827|gb|EFN92123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella amnii CRIS 21A-A]
Length = 184
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
NI V ++K + F+D RG+F +++ K +G F+QDN S S G +RGLH+Q+
Sbjct: 7 NIKGVWLIKPKIFKDDRGYFFESFRQDEFDKNIGHHVEFIQDNESKS-SYGVLRGLHYQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++QAKLVR I G++ D+AVD+RR+S TYG +V++E+S N Q++IP GFAHGF+ L
Sbjct: 66 GEFSQAKLVRIITGKVIDVAVDLRRSSTTYGKYVAVELSEENKCQLFIPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ-NLPFLNQI 175
YKV + Y+ + ++ + W DK+I I WP+ DT +SEKD N L +
Sbjct: 126 KEAIFSYKVDNIYAPQSEASIKWNDKTIGIEWPI-DTKDIVLSEKDLNNALSLEEA 180
>gi|188588490|ref|YP_001922380.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E3 str.
Alaska E43]
gi|188498771|gb|ACD51907.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E3 str.
Alaska E43]
Length = 179
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ + F D RGWF +TYS +K + FVQDN S+S + G +RG+HFQ
Sbjct: 7 KLDGVYIVEPQVFGDERGWFMETYSK--IKTPEIACDFVQDNQSYSKEKGILRGIHFQNG 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVRC++G + D+AVD+R+ S TY WV++E+SA N Q++IP GF HGF+TL
Sbjct: 65 EHAQAKLVRCVSGAVLDVAVDLRKKSLTYKQWVAVELSAENKKQLFIPRGFGHGFVTLTK 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ E +YK ++Y+ E D + + D I + W + + P +SEKD+ P L D F
Sbjct: 125 DVEFVYKTDNYYNYESDRSIRFDDPEIGVEWGIEN---PILSEKDKKAPLLQDSDCTF 179
>gi|295675698|ref|YP_003604222.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1002]
gi|295435541|gb|ADG14711.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1002]
Length = 183
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/176 (38%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
++ V+I++ + F D+RG+F +++++ E FVQDNHS S G +RGLH+Q
Sbjct: 9 SLPEVKIIEPKVFGDARGFFFESFNALEFAEKVEAGVEFVQDNHSRSAR-GVLRGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQ KLVR + G +FD+AVDIR++SP +G WV + +S N Q+++P GFAHGF+ L
Sbjct: 68 -QHAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVTLSVENHRQLWVPPGFAHGFVVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ EH+ + W D +I I WP+ P ++ KD L +
Sbjct: 127 ESAQFLYKTTDYWFPEHERSIVWNDPAIGIEWPI--DFEPLLAAKDAAGKRLADAE 180
>gi|89901454|ref|YP_523925.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodoferax ferrireducens
T118]
gi|89346191|gb|ABD70394.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodoferax ferrireducens
T118]
Length = 183
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ R F D+RG+F ++++ + + GL FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVLILEPRVFGDARGFFFESFNQRDFAQATGLDVEFVQDNHSRSVK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+ VD+RR+SP +G W + +SA+N Q+++P GFAHGF+
Sbjct: 68 QHPQGKLVRVTQGEVFDVVVDLRRDSPNFGKWDGVLLSADNKRQLWVPPGFAHGFVVTSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ EH+ + W D ++ + WPL T P ++ KD L + +
Sbjct: 128 TAEFLYKTTDYWYPEHERSLLWNDPTVGVRWPL--TGEPQLAAKDSAAKTLAEAE 180
>gi|83746220|ref|ZP_00943274.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum UW551]
gi|207744129|ref|YP_002260521.1| dtdp-4-dehydrorhamnose 3,5-epimerase protein [Ralstonia
solanacearum IPO1609]
gi|83727186|gb|EAP74310.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum UW551]
gi|206595533|emb|CAQ62460.1| dtdp-4-dehydrorhamnose 3,5-epimerase protein [Ralstonia
solanacearum IPO1609]
Length = 183
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 106/175 (60%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++++++ ++ G++ FVQDNHS S G +RGLH+Q
Sbjct: 10 IPEVLILEPKVFGDDRGFFFESFNARTFEQATGVKRTFVQDNHSRSAR-GVLRGLHYQIQ 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR G +FD+AVD+R+ SPT+G WV + +SA N Q+++P GFAHGF+
Sbjct: 69 Q-PQGKLVRVTVGEVFDVAVDLRKRSPTFGKWVGVTLSAENKRQLWVPEGFAHGFVVTSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ EH+ + W D + I WP+ T P ++ KD L D
Sbjct: 128 YAEFLYKTTDYWYAEHERSIVWNDPDLGIEWPVQGT--PILAAKDAAGARLAGAD 180
>gi|254673656|emb|CBA09229.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
alpha275]
Length = 190
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKS-GKGVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G WV +SA N Q++IP GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWVGEILSAQNQCQLWIPEGFAHGFCVLGDA 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 131 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKAWAQAEK 183
>gi|255099388|ref|ZP_05328365.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile
QCD-63q42]
Length = 185
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ F D RG+F ++Y+ K E GL F+QDN S S G +RG+HFQ
Sbjct: 10 KIEGLYIVEPNVFYDERGYFMESYNKKDFIEQGLDMCFIQDNES-SSRKGVLRGMHFQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR G +FD+AVD+R++S T+G W + +S N Q YIP GFAHGF+ L
Sbjct: 68 KYPQGKLVRVTEGEVFDVAVDLRKDSQTFGKWEGVILSDKNKKQFYIPEGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK T++Y E ++G W DK I I WPL +SEKD+ I
Sbjct: 128 KAVFSYKCTNYYYPEFENGFIWNDKQISIEWPLKGIEEIFLSEKDKKQKSFKDI 181
>gi|253583524|ref|ZP_04860722.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Fusobacterium varium ATCC
27725]
gi|251834096|gb|EES62659.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Fusobacterium varium ATCC
27725]
Length = 475
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 116/193 (60%), Gaps = 6/193 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N+ + I++ F D RG+F ++Y+ +++G+ + FVQDNHS S G +RGLHFQ
Sbjct: 10 NLQGIYIIEPLVFGDDRGFFLESYNKSEFEKIGIFEEFVQDNHSKS-KKGVLRGLHFQ-T 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKL+R I G+IFDI VDIR++S TYG W E+SA N +YI GFAHGF+ LE
Sbjct: 68 RHSQAKLIRVIKGKIFDIVVDIRKSSFTYGKWCGTELSAENKKMLYISKGFAHGFLALED 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
+TE+ YK +FY+ ++DSG+ W DK I+I W +SEKD+ +
Sbjct: 128 DTEIEYKCDEFYNAQYDSGIMWNDKDININWNFEKYGIKEEDIILSEKDKKHQSFKEYTE 187
Query: 178 PFEYDGLPLLSLN 190
+ + + L +
Sbjct: 188 KYIGENVLLTGGD 200
>gi|207728136|ref|YP_002256530.1| dtdp-4-dehydrorhamnose 3,5-epimerase protein [Ralstonia
solanacearum MolK2]
gi|206591381|emb|CAQ56993.1| dtdp-4-dehydrorhamnose 3,5-epimerase protein [Ralstonia
solanacearum MolK2]
Length = 183
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++++++ ++ G++ FVQDNHS S G +RGLH+Q
Sbjct: 10 IPEVLILEPKVFGDDRGFFFESFNARTFEQATGVKRTFVQDNHSRSAR-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+AVD+R+ SPT+G WV + +SA N Q+++P GFAHGF+
Sbjct: 68 QHPQGKLVRVTVGEVFDVAVDLRKRSPTFGKWVGVTLSAENKRQLWVPEGFAHGFVVTSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ EH+ + W D + I WP+ T P ++ KD L D
Sbjct: 128 YAEFLYKTTDYWYAEHERSIVWNDPDLGIEWPVQGT--PILAAKDAAGARLAGAD 180
>gi|254521791|ref|ZP_05133846.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stenotrophomonas sp. SKA14]
gi|219719382|gb|EED37907.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stenotrophomonas sp. SKA14]
Length = 185
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +++ F D+RG+F +T++++ LGL D FVQ N S S +RGLH+Q P
Sbjct: 7 KLPGCVVIEPAVFGDARGYFFETWNAERFASLGLPDRFVQSNVSTS-AQDVLRGLHYQWP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G ++D+AVDIRR SPT+G W ++ +SA N Q +IP GFAHGF L
Sbjct: 66 R-PQGKLVSVLEGEVYDVAVDIRRGSPTFGQWEAVVLSAENKKQFWIPEGFAHGFAVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y T+ Y + D+GV W D I + WP+ P++S KD+ PFL I
Sbjct: 125 RAVFSYLCTEVYLKDFDAGVRWNDADIAVDWPVS---APTLSAKDETAPFLKDI 175
>gi|319942931|ref|ZP_08017214.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lautropia mirabilis ATCC
51599]
gi|319743473|gb|EFV95877.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lautropia mirabilis ATCC
51599]
Length = 190
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 79/188 (42%), Positives = 109/188 (57%), Gaps = 10/188 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ + F DSRG+F ++Y+ K+ E G FVQDN S S G +RGLH+Q
Sbjct: 8 LPDVFLIEPKVFGDSRGYFYESYNQKVFDEMAGSHVEFVQDNQSRSAK-GVLRGLHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+R + G IFD+AVDIRR SPT+G +SA N +IP GFAHGF++LE
Sbjct: 67 Q-AQGKLIRVMEGAIFDVAVDIRRGSPTFGKSAGFVLSAENKRMAWIPPGFAHGFLSLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL---DTILPSVSEKDQNLPFLNQIDSP 178
T V+YK +DFY+ H+ + W D + I WPL VS+KD+ L + D
Sbjct: 126 GTTVLYKASDFYAPAHERSLLWSDPVLGIEWPLDQVGGLSAVLVSDKDKIGKPLAEAD-- 183
Query: 179 FEY-DGLP 185
Y +G P
Sbjct: 184 -VYAEGQP 190
>gi|256830322|ref|YP_003159050.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfomicrobium baculatum
DSM 4028]
gi|256579498|gb|ACU90634.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfomicrobium baculatum
DSM 4028]
Length = 185
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/183 (43%), Positives = 112/183 (61%), Gaps = 7/183 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I V +L R F D RG+F ++++++ + G+ VFVQDNHS S G +RGLH+Q
Sbjct: 6 LSIPEVILLTPRVFGDDRGFFYESFNAQAFTKATGVATVFVQDNHSCS-QRGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PPYAQ KLVR + G +FD+AVDIRR S T+G WV +SA N Q++IP GFAHGF+TL
Sbjct: 65 LPPYAQGKLVRVVHGEVFDVAVDIRRYSSTFGKWVGTLLSAENKRQLWIPPGFAHGFITL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL---NQID 176
E +YK T +Y+ + + W D I I WP + P +S+KD+ L +
Sbjct: 125 SDRAEFLYKTTAYYAPVAERCIRWNDLDIGIDWPYSE--APFLSKKDKLGTSLVLAEGFE 182
Query: 177 SPF 179
S F
Sbjct: 183 SEF 185
>gi|271499809|ref|YP_003332834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii Ech586]
gi|270343364|gb|ACZ76129.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii Ech586]
Length = 178
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ + F D+RG+F +T+ K +E L + FVQDNHS S G +RGLHFQ
Sbjct: 8 IQGVKIIQPKVFGDARGFFLETFEKKRYQEMLDIDLDFVQDNHSRSAR-GVLRGLHFQ-T 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIR +SPTYG W + +S N Q +IP G AHGF+ L
Sbjct: 66 VNPQGKLVRVVRGEVFDVAVDIRPDSPTYGRWAGVNLSEENKTQFWIPPGLAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y+ H+ + W D I I WP+ LP +S+KD+ ++
Sbjct: 126 LADFEYKCTDYYNPVHEGCLLWNDPDIGIDWPI---TLPLLSDKDKKGKAFKEL 176
>gi|22297999|ref|NP_681246.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosynechococcus elongatus
BP-1]
gi|22294177|dbj|BAC08008.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosynechococcus elongatus
BP-1]
Length = 182
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 105/177 (59%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +L+ + F D RG+F ++Y+ + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 LAIADVLLLELQVFRDQRGFFLESYNQRAFMAATGLAVTFVQDNHSASQQ-GVLRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ Q KL+R I G+IFD+AVD+RR+SPT G WV +SA N Q++IP GFAHGF
Sbjct: 66 H-QHPQGKLIRVIEGKIFDVAVDLRRSSPTCGQWVGTWLSAENFQQLWIPPGFAHGFWVQ 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+V+YK TD+Y + + W D ++ I WP+ P +S KDQ N++
Sbjct: 125 SATAQVLYKTTDYYHPGDEHTLLWNDPTVGIQWPI--DSEPLLSAKDQQGKSFNELP 179
>gi|148252643|ref|YP_001237228.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bradyrhizobium sp. BTAi1]
gi|146404816|gb|ABQ33322.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bradyrhizobium sp. BTAi1]
Length = 191
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/179 (45%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + L K D+RG+FS+ Y ++ GL FVQ+NH FS G +RGLHFQRPP
Sbjct: 8 ILGILSLTPVKHGDARGFFSEVYRREIASAAGLPVDFVQENHVFSAQRGVLRGLHFQRPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVRCI G I D+AVDIR SPT+G V++E+S+ N Q+++P GFAHG+ LE
Sbjct: 68 RAQGKLVRCIRGAILDVAVDIRTGSPTFGRHVAVELSSANWTQLWVPEGFAHGYAVLEAP 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
EV+YKVTD+++ + G+AW D + I W L +S+KD+ P L+ + F++
Sbjct: 128 CEVLYKVTDYWAPSSELGLAWDDPDLGIDWRL-GRDEVILSDKDRVHPRLSGLAPVFQF 185
>gi|53712099|ref|YP_098091.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis YCH46]
gi|52214964|dbj|BAD47557.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis YCH46]
Length = 189
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 2/180 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ R F D RG F ++++ + E + +FVQDN S S G IRGLHFQ+P
Sbjct: 7 DIKGVMIIEPRLFSDERGHFFESFNQNIFVEEVCKTMFVQDNESKSSY-GVIRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + G + D+AVDIRRNSP +G +VS+E++ +N Q++IP GFAHGF L
Sbjct: 66 PFAQSKLVRVVKGAVLDVAVDIRRNSPFFGKYVSVELTEDNHRQLFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK + Y+ + + +AW D + I W + + +SEKD L D F+Y
Sbjct: 126 EVVFQYKCDNLYAPQCEGAIAWNDPDLGIDWKIPMEKV-VLSEKDSCHSVLKDTDWLFDY 184
>gi|282877916|ref|ZP_06286725.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella buccalis ATCC
35310]
gi|281299917|gb|EFA92277.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella buccalis ATCC
35310]
Length = 182
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 111/175 (63%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + FED+RG+F + + ++ Q F+QDN S S G +RGLH+Q+
Sbjct: 7 KIKGVWIIEPKVFEDARGYFFEAWKQADFQKQIGQVDFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I GR+ D+AVD+R++SPT+ +VS+E+S +N Q++IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGRVLDVAVDLRKSSPTFSQYVSVELSEDNKRQLFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ ++G+ W D++I+I+WP+ + + SEKD L +
Sbjct: 126 EAIFTYKVDNPYAPAQEAGIRWDDETINISWPIDKDKIVT-SEKDLKACSLADAE 179
>gi|261379149|ref|ZP_05983722.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria cinerea ATCC 14685]
gi|269144374|gb|EEZ70792.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria cinerea ATCC 14685]
Length = 185
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++LK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLKPQVFKDGRGFFMETFRDGWFKENIADRTFVQENHSKSSK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGTTLSAQNQYQLWIPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E+ YK TD+Y + + + W D +I I WPL P +S KD Q +
Sbjct: 126 AELTYKCTDYYKPKAEQVLIWNDPAIGIGWPL--QTSPLLSPKDLAGKTWAQAEK 178
>gi|262066767|ref|ZP_06026379.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium periodonticum
ATCC 33693]
gi|291379570|gb|EFE87088.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium periodonticum
ATCC 33693]
Length = 187
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + IL+ R FEDSRG+F ++Y+ KE+G+ ++FVQDN S S +RGLHFQ+
Sbjct: 7 EIKDLLILEPRVFEDSRGFFMESYNYNTFKEIGIDNIFVQDNISKSSK-AVLRGLHFQKD 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLV + G + D+ VD+R NS T+G + ++E++ N ++IP GFAH F+TLE
Sbjct: 66 EYAQAKLVYVLRGAVLDVTVDLRENSETFGKYEAVELNEKNKRMLFIPRGFAHAFLTLEN 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQ 174
+TE IYK +FY+ + + G+ W D ++I W L +SEKD+ +
Sbjct: 126 DTEFIYKCDNFYNPKSEVGIVWNDVDLNINWNLEKYNIKEEELIISEKDKKNITFKE 182
>gi|251780228|ref|ZP_04823148.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084543|gb|EES50433.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 179
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ + F D RGWF +TYS +K + FVQDN S+S + G +RG+HFQ
Sbjct: 7 KLDGVYIVEPQVFGDERGWFMETYSK--IKTPEIACDFVQDNQSYSKEKGILRGIHFQNG 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVRC++G + D+AVD+R+ S TY WV++E+SA N Q++IP GF HGF+TL
Sbjct: 65 EHAQAKLVRCVSGAVLDVAVDLRKKSLTYKQWVAVELSAENKKQLFIPRGFGHGFVTLTN 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ E +YK ++Y+ E D + + D I + W + + P +SEKD+ P L D F
Sbjct: 125 DVEFVYKTDNYYNYESDRSIRFDDPEIGVEWGIEN---PILSEKDKKAPLLQDSDCTF 179
>gi|307720179|ref|YP_003891319.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurimonas autotrophica DSM
16294]
gi|306978272|gb|ADN08307.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurimonas autotrophica DSM
16294]
Length = 192
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ D RG+F +T+ + L+E LG + F QDN S S G +RGLH+Q
Sbjct: 7 EIPDVVLIEPVVHGDERGYFVETFRADKLEEFLGYKINFCQDNESKS-SRGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KLVR I GR+ D+AVDIR+ S T+G V++E++A N Q+ +P GFAHGF+ LE
Sbjct: 66 HPAAQTKLVRVIQGRVLDVAVDIRKESLTFGKHVAVELNAENKHQLLVPRGFAHGFVVLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T YKV ++YS E+D G+ + D++++I W + +S KD+ P L + + F+
Sbjct: 126 DDTIFAYKVDNYYSPENDRGILFSDEALNIDWTIP-YSELKLSAKDKVQPKLTETNDIFD 184
Query: 181 YD 182
Y
Sbjct: 185 YK 186
>gi|296531723|ref|ZP_06894552.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseomonas cervicalis ATCC
49957]
gi|296267955|gb|EFH13753.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseomonas cervicalis ATCC
49957]
Length = 208
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/168 (50%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
Query: 12 RKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRC 71
R+F D+RG+FS+++S++ L GL FVQDN S S GT+RGLHFQ P QAKLVR
Sbjct: 42 RRFGDARGYFSESWSARDLAACGLVAEFVQDNFSTSAQVGTLRGLHFQIAPEPQAKLVRV 101
Query: 72 IAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTD 131
+ GR+ D+AVD+RR SPTYG V++E++A G Q+++P GFAHGF TLE + V YKVT
Sbjct: 102 LRGRVLDVAVDLRRASPTYGQHVAVELTAEAGNQLFVPEGFAHGFCTLEPDCAVAYKVTG 161
Query: 132 FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+Y+ D GVAW D + I WPL P +S+KD P L ++ + F
Sbjct: 162 YYAPACDKGVAWDDPDLAIAWPLPPGG-PVLSDKDARQPKLAELPAYF 208
>gi|34541218|ref|NP_905697.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas gingivalis W83]
gi|34397534|gb|AAQ66596.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas gingivalis W83]
Length = 196
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ R F D RG+F +++S + ++ FVQDN S S G +RGLHFQ+P
Sbjct: 7 EIPEVVILEPRLFRDDRGYFFESFSRQEIETGIRPINFVQDNESASRY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + G + D AVDIR SPT+G +V++E+S N Q++IP GFAHGF+ L
Sbjct: 66 PHAQSKLVRVVRGCVIDYAVDIRFGSPTFGKYVAVELSDTNFRQLFIPRGFAHGFVVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK ++Y+ + + +AW D ++DI W + + +S KDQ P ++ S ++
Sbjct: 126 EVVFQYKCDNYYAPQSEGAIAWNDPNLDIEWKIPAEDI-ILSAKDQANPSWTELISSEDF 184
Query: 182 DGLPLLSLNMER 193
L + ++
Sbjct: 185 RNLFPYNQDLYE 196
>gi|158521029|ref|YP_001528899.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfococcus oleovorans
Hxd3]
gi|158509855|gb|ABW66822.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfococcus oleovorans
Hxd3]
Length = 187
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 81/188 (43%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I VRI++ FED+RG+F +TY + G+ FVQDN SFS GT+RGLH+Q
Sbjct: 7 DITGVRIIEPDVFEDARGFFMETYQRQRYAGYGVDVDFVQDNLSFSSA-GTLRGLHYQY- 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLV I+G I+D+AVD+RR SPT+G WV +S+ N Q +IP GFAHGF+ +
Sbjct: 65 PFAQEKLVHVISGEIYDVAVDVRRGSPTFGRWVGTALSSANRRQFFIPKGFAHGFLVVSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
V YK D+Y E D + W D ++ I W P +S KD P L I S +
Sbjct: 125 TALVTYKCGDYYHPEADRTLRWDDPALIIDWGTK---TPLLSPKDAAAPSLKDIPSGY-- 179
Query: 182 DGLPLLSL 189
LP+
Sbjct: 180 --LPVYGE 185
>gi|92116639|ref|YP_576368.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14]
gi|91799533|gb|ABE61908.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14]
Length = 184
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/180 (38%), Positives = 98/180 (54%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++ R F D RG+F +TY E G+ F+QDN S S G +RGLH Q P
Sbjct: 7 ELPEVIIIEPRLFGDQRGFFLETYQFHRYAEYGVSRPFIQDNLSRSAR-GVLRGLHLQNP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G++ D+AVD+R SP +G V++E+S N Q+++P GFAHGF+ L
Sbjct: 66 LT-QGKLVTALRGKVLDVAVDVRVGSPNFGRHVAVELSEENRRQLWVPRGFAHGFVVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ YK D YS + + + W D +I I W L P +S KD P L + + Y
Sbjct: 125 TADFFYKCDDLYSPKDELSIRWDDPAIGIDWGLE---TPFLSAKDAGAPLLADVKNLPVY 181
>gi|288927846|ref|ZP_06421693.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella sp. oral taxon 317
str. F0108]
gi|288330680|gb|EFC69264.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella sp. oral taxon 317
str. F0108]
Length = 182
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ + F D RG+F +++ + ++ + FVQDN S S G +RGLH+Q+
Sbjct: 7 ELQGVFVIQPKVFNDERGYFFESWKKEEFEKHVGKVDFVQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+QAKLVR I GR+ D+AVD+R++SPT+G +V++E+S N Q++IP GFAHGF+ L
Sbjct: 66 EASQAKLVRVIKGRVLDVAVDLRKSSPTFGKYVAVELSDENKKQLFIPRGFAHGFLVLSP 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y + ++ + W D+++ I WP+ + + S KD L + +
Sbjct: 126 EAVFTYKVDNVYCPQSETSIRWNDETLGIEWPIEYDKIVT-SAKDLKGKSLGEAE 179
>gi|237739562|ref|ZP_04570043.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 2_1_31]
gi|229423170|gb|EEO38217.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 2_1_31]
Length = 187
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 111/177 (62%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + +++ + FEDSRG+F ++Y+ KELG+ +VFVQDN S S G +RGLHFQR
Sbjct: 7 KIKNLLLIEPKIFEDSRGFFMESYNYNTFKELGIDNVFVQDNISKSSK-GVLRGLHFQRD 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLV + G + DI VD+R++S T+G + ++E++ N ++IP GFAHGF+TLE
Sbjct: 66 EYAQAKLVYVLRGAVLDITVDLRKDSETFGRYEAVELNDKNKRMLFIPRGFAHGFLTLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQ 174
NTE +YK +FY+ + + G+ W D ++ W L +SEKD+ +
Sbjct: 126 NTEFVYKCDNFYNPKSEVGIIWNDTDLNTDWNLDKYNIKEEELIISEKDKKNITFKE 182
>gi|161869099|ref|YP_001598265.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis 053442]
gi|161594652|gb|ABX72312.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis 053442]
Length = 179
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKS-GKGVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TD+Y E + + W D ++ I WPL P++S KD L +
Sbjct: 126 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|160888244|ref|ZP_02069247.1| hypothetical protein BACUNI_00653 [Bacteroides uniformis ATCC 8492]
gi|156862190|gb|EDO55621.1| hypothetical protein BACUNI_00653 [Bacteroides uniformis ATCC 8492]
Length = 182
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D+RG+F + + + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFHDARGYFMEAFKEEEFRAHVGNVHFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+QAKLVR I G++ D+AVD+R++SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 DCSQAKLVRVIKGKVLDVAVDLRKSSPTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D++I I WP+ T +S+KD +
Sbjct: 126 EAVFTYKVDNVYAPQSEASIRFDDETIGIEWPVA-TEQLLLSDKDGHAVSFKDA 178
>gi|194364283|ref|YP_002026893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stenotrophomonas maltophilia
R551-3]
gi|194347087|gb|ACF50210.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stenotrophomonas maltophilia
R551-3]
Length = 185
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D+RG+F +T++++ LGL F Q N S S G +RGLH+Q P
Sbjct: 8 LPGCVVIEPAVFGDARGYFFETWNAERFAALGLPHRFAQSNVSTS-AQGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIRR SPT+G W ++ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDIRRGSPTFGQWEAVVLSAENKKQFWIPDGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y T+ Y + D+GV W D I + WP+ P++S KD++ PFL I
Sbjct: 126 AVFSYLCTEVYLKDFDAGVRWNDADIAVDWPIS---APTLSAKDESAPFLKDI 175
>gi|229010610|ref|ZP_04167811.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus mycoides DSM 2048]
gi|229132118|ref|ZP_04260977.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-ST196]
gi|229166160|ref|ZP_04293920.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH621]
gi|228617258|gb|EEK74323.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH621]
gi|228651338|gb|EEL07314.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus BDRD-ST196]
gi|228750654|gb|EEM00479.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus mycoides DSM 2048]
Length = 181
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++L+ R FED RG+F+++Y+ K+L+ LG+ F+QDN S+S GTIRGLHFQ+ P A
Sbjct: 10 DAKLLEPRLFEDERGFFTESYNKKMLESLGITHSFLQDNVSYSAHSGTIRGLHFQKNPKA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KL++ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T
Sbjct: 70 QTKLIQVMQGAIYDVIVDLRKDSPTFKKWRGYILSADNHRQLLVPKGFAHGFCTLVPHTI 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YKV ++YS +HDSG+ W+DK + I WP+ + P +S+KD+ LP L + + F
Sbjct: 130 VMYKVDEYYSADHDSGLLWEDKELSIPWPVTN---PILSDKDRILPLLQEYEDSF 181
>gi|186477068|ref|YP_001858538.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phymatum STM815]
gi|184193527|gb|ACC71492.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phymatum STM815]
Length = 183
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/176 (38%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFYESFNAREFAEKVEAGVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVD+R++SPT+G W + +S +N Q++IP GFAHGF+ L
Sbjct: 68 EHAQGKLVRVVEGEVFDVAVDVRKSSPTFGKWEGVLLSGDNHRQLWIPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L++ +
Sbjct: 128 AAQFLYKTTDYWFPEHERSIVWNDPEIGIEWPI--DFEPVLAAKDAAGKRLSEAEC 181
>gi|302028134|gb|ADK90948.1| RfbC [Neisseria meningitidis]
gi|302028155|gb|ADK90968.1| RfbC [Neisseria meningitidis]
gi|319411443|emb|CBY91858.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase; dTDP-L-rhamnose synthetase) [Neisseria
meningitidis WUE 2594]
Length = 190
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCNRTFVQENHSKS-GKGVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFCVLGDA 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P++S KD Q +
Sbjct: 131 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQGE--PNLSPKDLAGKTWAQAEK 183
>gi|221214408|ref|ZP_03587379.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD1]
gi|221165665|gb|EED98140.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia multivorans
CGD1]
Length = 183
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++ + E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNGREFAEQVEPGVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIRR+SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRRSSPNFGKWVGVTLSADNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L + +
Sbjct: 128 AAQFLYKTTDYWYPEHERSILWNDPDIRIEWPI--DFEPLLAAKDAAGKRLAEAEC 181
>gi|312891211|ref|ZP_07750732.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mucilaginibacter paludis DSM
18603]
gi|311296290|gb|EFQ73438.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mucilaginibacter paludis DSM
18603]
Length = 182
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/177 (44%), Positives = 109/177 (61%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ R F D RG+F ++Y+ + E G+ FVQDN S S GT+RGLH Q PP
Sbjct: 8 IEGLLIIEPRVFPDDRGYFYESYNQQKYIEAGINVNFVQDNQS-SSSKGTLRGLHAQAPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I G + D+AVDIR+ SPTYG ++ +++SA N LQ++IP GF HGF LE +
Sbjct: 67 YGQDKLVRVIKGSVIDVAVDIRKGSPTYGQYLKIKLSAQNNLQLWIPQGFLHGFFALEDD 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ YK+T+FY + GV D + I W + + ++S KD+ LP SPF
Sbjct: 127 SIFAYKITNFYDKASEIGVKITDPELGIDWGFPISDI-TLSPKDEALPDFKSFVSPF 182
>gi|331677945|ref|ZP_08378620.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli H591]
gi|331074405|gb|EGI45725.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli H591]
Length = 186
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 94/174 (54%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I++ + F D RG+F + Y K +ELG FVQDN S S +RGLHFQ+
Sbjct: 8 LKDAVIIEPKIFGDERGYFFEVYQKKRYQELGFALEFVQDNRSKSTK-NVLRGLHFQKTK 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV G +FD+AVD+R S T+G S+ +S N LQ YIP GFAHGF L
Sbjct: 67 -PQGKLVSVTQGAVFDVAVDLRPESLTFGQHHSVILSEENFLQFYIPPGFAHGFCVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK TD+Y +SG+ W D + I WP+ P VS KD LP L I
Sbjct: 126 ASFQYKCTDYYDPTDESGLIWNDPDLGIEWPVSH---PVVSAKDCFLPSLASIK 176
>gi|313201256|ref|YP_004039914.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylovorus sp. MP688]
gi|312440572|gb|ADQ84678.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylovorus sp. MP688]
Length = 181
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/171 (43%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I + + F D+RG+F ++Y+ + L GL+ FVQDNHS S G +RGLH+Q
Sbjct: 8 LPDVLIFEPKVFGDARGFFFESYNQNTFEALTGLKRTFVQDNHSASAK-GVLRGLHYQIR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AG + D+AVD+R+NSP++G W S +SA N Q+++P GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVVAGEVLDVAVDMRKNSPSFGRWTSAILSAENRRQMWVPEGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK TDFY+ EH+ + W D +++I W L T P++S KD
Sbjct: 126 FAEFLYKTTDFYAPEHECCIRWDDPTLNIDWQL--TAPPALSAKDSRGLDF 174
>gi|294783375|ref|ZP_06748699.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 1_1_41FAA]
gi|294480253|gb|EFG28030.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 1_1_41FAA]
Length = 187
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + +++ + FEDSRG+F ++Y+ KELG+ ++FVQDN S S G +RGLHFQ+
Sbjct: 7 KIKNLLLIEPKVFEDSRGFFIESYNYNTFKELGINNIFVQDNFSKSSK-GVLRGLHFQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLV + G + D+ VD+R++S T+G +E++ N ++IP GFAHGF+TLE
Sbjct: 66 EYAQAKLVNVLRGAVLDVTVDLRKDSETFGKCFIIELNEKNKRMLFIPRGFAHGFLTLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQ 174
NTE YK +FY+ + + G+ W D ++I W L +SEKD+ +
Sbjct: 126 NTEFFYKCDNFYNPKSEVGIIWNDIDLNIDWNLDKYNIKEDELIISEKDKKNITFKE 182
>gi|270296766|ref|ZP_06202965.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D20]
gi|317480124|ref|ZP_07939234.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 4_1_36]
gi|270272753|gb|EFA18616.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D20]
gi|316903671|gb|EFV25515.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 4_1_36]
Length = 182
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D+RG+F + + + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFHDARGYFMEAFKEEEFRAHVGNVHFIQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+QAKLVR I G++ D+AVD+R++SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 DCSQAKLVRVIKGKVLDVAVDLRKSSPTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D++I I WP+ T +S+KD +
Sbjct: 126 EAVFTYKVDNVYAPQSEASIRFDDEAIGIEWPVA-TEQLLLSDKDGHAVSFKDA 178
>gi|124515990|gb|EAY57499.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Leptospirillum rubarum]
Length = 183
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +++ +K LG+ +FVQDNHS S G +RGLHFQ
Sbjct: 8 IRGLLRIRPDVHGDERGFFLESFHAKKFAALGIPHLFVQDNHSRSAR-GVLRGLHFQ-KR 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR ++G +FD+AVD+R SPT+G W L +SA + +Y+P G AHGF+ LE
Sbjct: 66 HPQGKLVRVLSGSLFDVAVDLRHGSPTFGHWFGLTLSAGDPEFLYLPEGMAHGFLALEDR 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
TE+ YK TDFY + G+ W D +I I WP +S KD P L +I
Sbjct: 126 TELFYKCTDFYDPADEGGLRWNDPAIGIAWP---ETPAVLSPKDAAFPVLAKI 175
>gi|319411428|emb|CBY91840.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase; dTDP-L-rhamnose synthetase) [Neisseria
meningitidis WUE 2594]
Length = 184
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCNRTFVQENHSKS-GKGVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFCVLGDA 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TD+Y E + + W D ++ I WPL P++S KD L +
Sbjct: 131 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQGE--PNLSPKDLAGKVLAEA 181
>gi|75674744|ref|YP_317165.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Nitrobacter
winogradskyi Nb-255]
gi|74419614|gb|ABA03813.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter winogradskyi
Nb-255]
Length = 198
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I + R F D RG+F +TY E G+ FVQDN S S G +RGLH Q P
Sbjct: 21 EVPEVVIFEPRLFGDQRGFFLETYQFPRYAEHGVTRPFVQDNLSRSAR-GVLRGLHLQNP 79
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G++ D+AVD+R SP +G V++E+S N Q+++P GFAHGF+ L
Sbjct: 80 S-PQGKLVTVLRGKVLDVAVDVRAGSPNFGRHVAVELSEENRRQLWVPRGFAHGFVVLSE 138
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ YK D YS +++ + W D +I I W + PS+S KD + P L + +
Sbjct: 139 TADFFYKCDDLYSPKNELSIRWNDPTIGIDWGVE---TPSLSAKDADAPLLADVKN 191
>gi|167570967|ref|ZP_02363841.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia oklahomensis
C6786]
Length = 183
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E F+QDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFAEQVDAGVEFIQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVGGEVFDVAVDIRKSSPNFGKWVGVVLSADNHRQLWVPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ E + +AW D +I I WP+ P ++ KD L +
Sbjct: 128 AAQFLYKTTDYWFPEFERSIAWNDPAIGIDWPI--DFEPLLAAKDAAGKRLGDAE 180
>gi|329897709|ref|ZP_08272187.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium
IMCC3088]
gi|328921056|gb|EGG28468.1| dTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium
IMCC3088]
Length = 185
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ R F D RG+F +TYS++ K G+ FVQDNHS S G +RGLHFQ
Sbjct: 8 LPGVLIIEPRVFGDDRGFFLETYSAERYKTAGIP-EFVQDNHSRSSK-GVLRGLHFQ-LN 64
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR ++G +FD+AVDIR SPT+G +E+SA N Q Y+P GFAHGF+ +
Sbjct: 65 YPQGKLVRVVSGSVFDVAVDIRVGSPTFGKAAWVELSAENKRQFYVPPGFAHGFVVTSVT 124
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK TD+Y E + + W D +++I WP+ +P +S KD + L I+
Sbjct: 125 ADFEYKCTDYYHPEDEGALLWSDAALNIPWPID---IPQLSAKDASAKRLADIN 175
>gi|302346399|ref|YP_003814697.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella melaninogenica
ATCC 25845]
gi|302150921|gb|ADK97182.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella melaninogenica
ATCC 25845]
Length = 184
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/177 (39%), Positives = 107/177 (60%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V I++ + F D RG+F +++ K +G F+QDN S S G +RGLH+Q
Sbjct: 7 EIDGVWIIEPKVFNDDRGYFFESFKQAEFDKNVGYHVDFIQDNESKS-SYGVLRGLHYQE 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQAKLVR I G++ D+AVD+R++SPT+G +V +E+S +N Q ++P GFAHGF+ L
Sbjct: 66 SDTAQAKLVRVIKGKVVDVAVDLRKSSPTFGKYVMVELSEDNKRQFFVPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN-LPFLNQID 176
YKV + YS + ++ + W D+++ I WP+ DT +S+KD N L
Sbjct: 126 DEAIFTYKVDNVYSPQTEASLRWNDETVGIKWPI-DTKDVILSDKDLNKGLSLKDAK 181
>gi|329954898|ref|ZP_08295915.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides clarus YIT 12056]
gi|328527002|gb|EGF54013.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides clarus YIT 12056]
Length = 182
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ R F D+RG+F + + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWIIEPRVFNDARGYFMEAFKEEEFRANIGDVHFVQDNESKSSF-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G++ D+AVD+RR+SPT+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGKVLDVAVDLRRSSPTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ + ++ + + D+++ I WP+ ++ VSEKD + +
Sbjct: 126 EAIFTYKVDNGYAPQAEASIRFNDETVGIDWPVAES-QFIVSEKDGHAVSFKDAE 179
>gi|218767237|ref|YP_002341749.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis Z2491]
gi|121051245|emb|CAM07520.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis Z2491]
Length = 190
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCNRTFVQENHSKS-GKGVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFCVLGDA 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 131 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKTWAQAEK 183
>gi|260576534|ref|ZP_05844523.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sp. SW2]
gi|259021257|gb|EEW24564.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sp. SW2]
Length = 185
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/177 (47%), Positives = 109/177 (61%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V IL +F D+RGWFS+T+++ + GL+ FVQDNHS S GT+RGLHFQ PP
Sbjct: 8 LADVMILTPARFGDARGWFSETWNAARMAAAGLRADFVQDNHSMSAAVGTLRGLHFQAPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC G IFD+AVDIRR S YG WV +E++ N Q+ +P GF HGF+T +
Sbjct: 68 HAQDKLVRCTRGAIFDVAVDIRRGSKGYGKWVGVELTPENRRQLLVPKGFLHGFVTRLPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
TEV YK +DFY+ + D V W ++ I W L P +S KD SPF
Sbjct: 128 TEVQYKCSDFYAPDCDGAVRWDSAALAIDWGL--DCPPILSHKDAQAVDFADFSSPF 182
>gi|260911475|ref|ZP_05918064.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella sp. oral taxon 472
str. F0295]
gi|260634404|gb|EEX52505.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella sp. oral taxon 472
str. F0295]
Length = 213
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ + F D RG+F + + + ++ + FVQDN S S G +RGLH+Q+
Sbjct: 38 ELQGVFVIEPKVFNDERGYFLEAWKKEEFEKHVGKVDFVQDNESKSSF-GVLRGLHYQKG 96
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+QAKLVR I G++ D+AVD+R++SPT+G +V++E+S N Q++IP GFAHGF+ L
Sbjct: 97 DASQAKLVRVIKGKVLDVAVDLRKSSPTFGKYVAVELSEENKRQLFIPRGFAHGFLVLSP 156
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y + ++ + W D+++ I WP+ + S KD N L++ +
Sbjct: 157 EAVFTYKVDNVYCPQSETSIRWNDETLGIQWPI-EYDKIITSPKDLNGKSLSEAE 210
>gi|153854428|ref|ZP_01995706.1| hypothetical protein DORLON_01701 [Dorea longicatena DSM 13814]
gi|149752954|gb|EDM62885.1| hypothetical protein DORLON_01701 [Dorea longicatena DSM 13814]
Length = 202
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/188 (41%), Positives = 103/188 (54%), Gaps = 18/188 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ D+RG+F +TY+ K ++E GL FVQDN S S G +RGLHFQ
Sbjct: 13 IQGLCVIEPTVHGDARGYFMETYNQKDMEEAGLTMQFVQDNQSCSTK-GVLRGLHFQ-KE 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +S TYG W +E++ N Q YIP GFAHGF+ L
Sbjct: 71 FPQGKLVRVVKGSVFDVAVDLRSDSETYGKWFGVELTEENKKQFYIPEGFAHGFLVLSDI 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK TDFY + G+AW D I I WP L D ++SEKD
Sbjct: 131 AEFCYKCTDFYHPGDEGGLAWNDPEIGIEWPTLTGEYKGTASGEGYALEDGTALNLSEKD 190
Query: 167 QNLPFLNQ 174
Q L
Sbjct: 191 QLWVGLKD 198
>gi|167903953|ref|ZP_02491158.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
NCTC 13177]
Length = 174
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 110/174 (63%), Gaps = 5/174 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRPP 62
V+I++ + F D+RG+F ++++++ E F+QDNHS S G +RGLH+Q
Sbjct: 2 PEVKIIEPKVFGDARGFFFESFNAREFAEQVDAGVEFIQDNHSRSAK-GVLRGLHYQI-Q 59
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR + G +FD+AVDIR++SP +G WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 60 HAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVVLSADNHRQLWVPPGFAHGFVVLSDA 119
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ E + +AW D +I I WP+ D P ++ KD L + +
Sbjct: 120 AQFLYKTTDYWFPEFERSIAWNDPAIGIDWPIDDE--PLLAAKDAAGKLLAEAE 171
>gi|304314129|ref|YP_003849276.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanothermobacter
marburgensis str. Marburg]
gi|302587588|gb|ADL57963.1| predicted dTDP-4-dehydrorhamnose 3,5-epimerase [Methanothermobacter
marburgensis str. Marburg]
Length = 185
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/172 (43%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ I++ + D RG+F +T++ L ++ GL FVQDN S S G +RGLHFQ
Sbjct: 11 LDGAIIIEPEVYGDERGYFMETFNQALFRDHGLDITFVQDNESMSRR-GVLRGLHFQ-LK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KL+R + G IFD+AVD+RR+S TYG WV + +S N + +IP GFAHGF+ L
Sbjct: 69 RPQGKLIRAVKGEIFDVAVDLRRDSETYGEWVGVHLSEENRREFFIPEGFAHGFLALADE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V YK T+ Y E+DSG+ W D I I WPL +S+KD N L +
Sbjct: 129 CIVNYKCTELYLPEYDSGIPWDDPDIGIEWPLELVDELIISDKDMNWKPLRE 180
>gi|296137704|ref|YP_003644948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinibacter ruber M8]
gi|295981873|emb|CBH22831.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinibacter ruber M8]
Length = 193
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ VR+++ + D RG F++ ++ + GL FVQDN S S + G +RGLHFQ P
Sbjct: 14 SLPGVRLIEPDVYMDDRGSFAELWNVRDYGHHGLDVTFVQDNLSRSRE-GVLRGLHFQNP 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KL+ + G ++D+ VD+R + T+G W +SA N Q+Y+P G+AHGF+
Sbjct: 73 R-PQGKLISVLKGAVYDVVVDVRAGADTFGAWEGQVLSAENARQLYVPEGYAHGFVATSG 131
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK TDFY E D V W D ++ I WP D P +SEKD P L++I
Sbjct: 132 EVLFHYKCTDFYHPEADRTVRWDDPALGIDWPTED---PILSEKDAGAPALDEIP 183
>gi|189092408|gb|ACD75808.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli]
gi|288816217|gb|ADC54940.1| RmlC [Escherichia coli]
gi|315285630|gb|EFU45072.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 110-3]
gi|323956203|gb|EGB51954.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli H263]
Length = 185
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I + +L+ + F D RG+F ++Y+ ++ G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDLIVLEPKVFSDERGFFMESYNQIEFEKAIGRHVNFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAKLVRC+ G++FD+AVD+R+NSPT+ W + +SA N Q++IP GFAHGF+
Sbjct: 66 APYAQAKLVRCVVGQVFDVAVDLRKNSPTFKKWFGITLSAENKRQLWIPEGFAHGFLVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E IYK T++Y+ H + + D ++I WP + L S+S+KDQ +++
Sbjct: 126 DEAEFIYKTTNYYAPGHQQAIIYNDPILNIDWPFCSSAL-SLSQKDQEAKLFSEL 179
>gi|320535548|ref|ZP_08035648.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema phagedenis F0421]
gi|320147609|gb|EFW39125.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema phagedenis F0421]
Length = 181
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + ++ + F D+RG+F +++S K G+ FVQDN S S G +RGLHFQ
Sbjct: 10 IDGLYKIQPKIFSDNRGYFFESWSKKEFAAAGITYDFVQDNQSKSLK-GVLRGLHFQ-NE 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR ++G +FD+AVDIR+NS ++G W + +SA Q +I GFAHGF+ L
Sbjct: 68 HPQGKLVRVLSGEVFDVAVDIRKNSSSFGKWFGVILSAEKQNQFFISPGFAHGFLVLSDE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
YK TDFY E + G+ W D +I I WP + +SEKD P
Sbjct: 128 AIFAYKCTDFYHPEDEGGIMWNDPAIGIEWP-KLDVPYILSEKDTKYPTF 176
>gi|284044611|ref|YP_003394951.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Conexibacter woesei DSM
14684]
gi|283948832|gb|ADB51576.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Conexibacter woesei DSM
14684]
Length = 182
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ +L+ + F D RG+F++T+ G+ F QDNHS S GT+RG+HFQ P
Sbjct: 8 ISGPVLLEPQVFGDHRGFFAETFREDAWSAAGVDVAFAQDNHSRSRR-GTLRGMHFQMTP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLVRC G I D+ VD+RR S T+G W + E+ + Q+++P GFAHGF
Sbjct: 67 -GQAKLVRCARGAIVDVVVDLRRASSTFGEWEAFELDDESMRQLFVPIGFAHGFCVTSEV 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+V+YK + +Y ++G+A+ D ++ I WP + P VSE+D P L +
Sbjct: 126 ADVVYKCSSYYDPATEAGIAYDDPAVGIVWP--SDVEPVVSERDAQAPRLADV 176
>gi|255305246|ref|ZP_05349418.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile ATCC 43255]
Length = 525
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/172 (42%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ F D RG+F ++Y+ K E GL F+QDN S S G +RG+HFQ
Sbjct: 10 KIEGLYIVEPNVFYDERGYFMESYNKKDFIEQGLDMCFIQDNES-SSRKGVLRGMHFQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR G +FD+AVD+R++S T+G W + +S N Q YIP GFAHGF+ L
Sbjct: 68 KYPQGKLVRVTEGEVFDVAVDLRKDSQTFGKWEGVILSDKNKKQFYIPEGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
YK T++Y E ++G W DK I I WPL +SEKD+ L
Sbjct: 128 KAVFSYKCTNYYYPEFENGFIWNDKQISIEWPLKGIEEIFLSEKDKKQKVLK 179
>gi|183597260|ref|ZP_02958753.1| hypothetical protein PROSTU_00504 [Providencia stuartii ATCC 25827]
gi|188023575|gb|EDU61615.1| hypothetical protein PROSTU_00504 [Providencia stuartii ATCC 25827]
Length = 179
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/175 (44%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ + FED RG+F ++++ K E G FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIIEPKIFEDERGFFFESFNQKQFDEAVGYPVNFVQDNHSKS-VKGVLRGLHYQE 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCI G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCIVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
N E +YK T FY+ + ++ + W D + I W P +S+KD +++
Sbjct: 126 ENAEFVYKTTKFYNPKSENTILWNDNKLSINW--NSESHPIISKKDSVGILFSEL 178
>gi|323144443|ref|ZP_08079047.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Succinatimonas hippei YIT
12066]
gi|322415782|gb|EFY06512.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Succinatimonas hippei YIT
12066]
Length = 183
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V ++ +KF D+RGWFS+ + ++ G Q FVQ N SFS +RG+H+Q
Sbjct: 7 SIPEVLLITNKKFGDNRGWFSEVFRLSEFEKAIGGQYKFVQINESFSMH-NILRGIHYQ- 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ Q KLVR ++G +FD+AVD+R+NSPT+ WV + +SA NG Q+++P GF HGF
Sbjct: 65 NPHPQGKLVRVVSGEVFDVAVDLRKNSPTFKQWVGVTLSAQNGQQLWVPPGFGHGFFVTG 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ +Y TD+Y+ + + +A+ D +DI WP++ +P VSEKD+ N
Sbjct: 125 EHAHFVYACTDYYAPQTEHCIAYDDPELDIKWPIILGKMPLVSEKDRKGKAFNDA 179
>gi|170726036|ref|YP_001760062.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella woodyi ATCC 51908]
gi|169811383|gb|ACA85967.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella woodyi ATCC 51908]
Length = 182
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 5/180 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V+IL + F D RG F + + E FVQ+N S S T+RGLH+Q
Sbjct: 8 ISDVKILAPQVFTDERGSFHEIFRDDWFIEHVADVRFVQENQS-SSKQSTLRGLHYQTAQ 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KL+R I+G +FD+ VD+RR+SPT+G S +SANN Q+++P GFAHGF +
Sbjct: 67 T-QGKLIRVISGEVFDVVVDLRRSSPTFGHCFSTTLSANNKHQLWVPIGFAHGFYVTSES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E++YK TD+Y+ + + + W D + I WP+ P +SEKD+ F ++
Sbjct: 126 AELVYKCTDYYAPQFECSILWNDPELAIDWPIASDCNPLLSEKDRKGVLFQDA---FVFE 182
>gi|218767221|ref|YP_002341733.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis Z2491]
gi|121051229|emb|CAM07502.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis Z2491]
Length = 184
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ+NHS S G +RGLH+Q
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCNRTFVQENHSKS-GKGVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFCVLGDA 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK TD+Y E + + W D ++ I WPL P +S KD L +
Sbjct: 131 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKVLAEA 181
>gi|303252480|ref|ZP_07338644.1| hypothetical protein APP2_1456 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248515|ref|ZP_07530533.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302648681|gb|EFL78873.1| hypothetical protein APP2_1456 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854991|gb|EFM87176.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 180
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V++L+ + F D RG+F + + + ++ FVQ+NHS S G +RGLH+Q
Sbjct: 7 NIPDVKLLEPQVFGDERGFFMEIFRDEWFRQYVADRTFVQENHSKS-IKGVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVQGSVFDVAVDLRKSSPTFGQWVGEVLSAENKRQLWVPEGFAHGFYVLTE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + + W D ++ I W L PS+S KD LN+
Sbjct: 125 TAEFTYKCTDYYNPKAEHSLIWNDPTVAINWNL--GGAPSLSAKDLAGKVLNEA 176
>gi|296315137|ref|ZP_06865078.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria polysaccharea ATCC
43768]
gi|296837942|gb|EFH21880.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria polysaccharea ATCC
43768]
Length = 185
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFKDGRGFFMETFRDGWFKENIADRNFVQENHSQSRK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR IAG +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRAIAGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D +I I WPL P +S KD Q +
Sbjct: 126 AEVMYKCTDYYKPEAEQVLIWNDPAIGIGWPL--QTTPLLSPKDLAGKTWAQAEK 178
>gi|325968735|ref|YP_004244927.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vulcanisaeta moutnovskia
768-28]
gi|323707938|gb|ADY01425.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vulcanisaeta moutnovskia
768-28]
Length = 202
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ F D RG+F++ Y G+ FVQ + S S G +RGLH+Q
Sbjct: 23 LEIPDVILVEPVVFPDIRGFFAELYKRTDFLAGGVPHDFVQVSLSKSRR-GVVRGLHYQL 81
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV + GR+ D+AVD+RR SP +G +V +E+SA+N ++IP GFAHGF LE
Sbjct: 82 KPMEQGKLVTVVKGRVVDVAVDVRRGSPWFGKYVMVELSADNPRLLWIPPGFAHGFQALE 141
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T +Y T YS +H+ V W D I I WP+ + + VSEKD P L ++ F+
Sbjct: 142 DDTLFLYLQTKEYSPQHERCVVWNDPEIGIPWPIRENV--IVSEKDGKCPPLKLAETNFD 199
Query: 181 Y 181
Y
Sbjct: 200 Y 200
>gi|331647689|ref|ZP_08348781.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli M605]
gi|330911875|gb|EGH40385.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli AA86]
gi|331043413|gb|EGI15551.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli M605]
Length = 179
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 112/173 (64%), Gaps = 5/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKIFEEAVGRKVEFVQDNHSKS-RKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+TL+
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLTLK 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
NTE++YK T +YS E++ + W D+ + I WP +S KD
Sbjct: 126 DNTEILYKTTSYYSPEYERSIIWNDEDLVIKWP---NDPCVISHKDSLAQSFA 175
>gi|298481049|ref|ZP_06999243.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
gi|298272623|gb|EFI14190.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. D22]
Length = 193
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 2/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F+D+RG+F +++S + ++ + FVQDN S S G +RG HFQ P
Sbjct: 7 KIDGVVVIEPKVFKDTRGYFLESFSLREFEKKVRKISFVQDNESMSSY-GVMRGFHFQFP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY Q+KLVRC+ GR+ D+AVDIR+ S TYG V++E+S N Q ++P GFAHGF L
Sbjct: 66 PYTQSKLVRCVKGRVLDVAVDIRKGSSTYGQHVAVELSEENHHQFFVPRGFAHGFAVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK +FY+ + D G++ +D+ + I W + + +SEKD FL DSPF
Sbjct: 126 IAVFQYKCDNFYNPQADGGISIKDEGLGINWMIPSESI-ILSEKDTRHTFLKNFDSPF 182
>gi|300776431|ref|ZP_07086289.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chryseobacterium gleum ATCC
35910]
gi|300501941|gb|EFK33081.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chryseobacterium gleum ATCC
35910]
Length = 181
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 106/173 (61%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ FED RG+F + ++ K +EL G+ FVQDN S S G +RGLH Q+
Sbjct: 8 LKDCYIIEPTIFEDERGYFFEKFNEKKFEELTGMNGHFVQDNISKS-SYGVLRGLHLQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLV C+ G ++D+AVD+R +SPT+G W +E++A N LQ+Y+P GF HGF L
Sbjct: 67 EHAQAKLVSCLEGSVWDVAVDLREDSPTFGKWFGIELTAENKLQLYVPRGFGHGFSVLST 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ YK +FYS E + V + D ++I W + D +SEKDQN P +
Sbjct: 127 HAVFSYKCDNFYSKESEGSVKFNDPDLNIDWKV-DEKDAILSEKDQNAPGFKE 178
>gi|306814843|ref|ZP_07449005.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli NC101]
gi|305852237|gb|EFM52689.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli NC101]
gi|323968167|gb|EGB63576.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli M863]
gi|327253165|gb|EGE64819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli STEC_7v]
Length = 185
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I + +L+ + F D RG+F ++Y+ ++ +G FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDLIVLEPKVFSDERGFFMESYNQIEFEKTIGRHVNFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQAKLVRC+ G++FD+AVD+R+NSPT+ W + +SA N Q++IP GFAHGF+
Sbjct: 66 APYAQAKLVRCVVGQVFDVAVDLRKNSPTFKKWFGITLSAENKRQLWIPEGFAHGFLVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E IYK T++Y+ H + + D ++I WP + L S+S+KDQ +++
Sbjct: 126 DEAEFIYKTTNYYAPGHQQAIIYNDPILNIDWPFCSSAL-SLSQKDQEAKLFSEL 179
>gi|294788794|ref|ZP_06754035.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Simonsiella muelleri ATCC
29453]
gi|294483276|gb|EFG30962.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Simonsiella muelleri ATCC
29453]
Length = 180
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI V++L+ + F D RG+F +T+ +E FVQ+NHS S + +RGLH+Q
Sbjct: 7 NIPEVKLLEPKIFGDERGFFMETFRDNWFREHISDCTFVQENHSKS-NKNVLRGLHYQ-T 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+R++SPT+G W +SA N Q++IP GFAHGF TLE
Sbjct: 65 AHTQGKLVRVVIGSVFDVAVDLRKSSPTFGKWFGTVLSAENKRQLWIPEGFAHGFYTLEN 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NTE +YK TD+Y + + W D +I I W L+ P++S KD L +
Sbjct: 125 NTEFVYKCTDYYDPSSEHSLLWNDPTIGIEWNLIGE--PNLSAKDMAGKILAEA 176
>gi|253999154|ref|YP_003051217.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylovorus sp. SIP3-4]
gi|253985833|gb|ACT50690.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylovorus sp. SIP3-4]
Length = 181
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/171 (42%), Positives = 106/171 (61%), Gaps = 5/171 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I + + F D+RG+F ++Y+ + L GL FVQDNHS S G +RGLH+Q
Sbjct: 8 LPDVLIFEPKVFGDARGFFFESYNQNTFQALTGLSPNFVQDNHSASAK-GVLRGLHYQIR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AG + D+AVD+R++SP++G W S +SA N Q+++P GFAHGF+ L
Sbjct: 67 Q-PQGKLVRVVAGEVLDVAVDMRKSSPSFGRWTSAILSAENRRQMWVPEGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK TDFY+ EH+ + W D +++I W L T P++S KD
Sbjct: 126 FAEFLYKTTDFYAPEHECCIRWDDPTLNIDWQL--TAPPALSAKDSRGLDF 174
>gi|300692300|ref|YP_003753295.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum PSI07]
gi|299079360|emb|CBJ52032.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum PSI07]
Length = 183
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++++++ ++ G++ FVQDNHS S +RGLH+Q
Sbjct: 10 IPEVLILEPKVFGDDRGFFFESFNARAFEQATGVKRTFVQDNHSRSAR-NVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+AVD+R++SPT+G WV + +SA N Q+++P GFAHGF+
Sbjct: 68 QHPQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGVTLSAENKRQLWVPEGFAHGFVVTSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ EH+ V W D + I WP+ T P ++ KD L D
Sbjct: 128 YAEFLYKTTDYWYAEHERSVVWNDPDLGIEWPVQGT--PILAAKDAAGARLAGAD 180
>gi|291540647|emb|CBL13758.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseburia intestinalis XB6B4]
Length = 194
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++++ F D+RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLKVIEPAVFGDARGYFMETYNYNDFKEAGIDCQFVQDNQSASKK-GVLRGLHFQI-N 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR ++G +FD+AVD+R S T+G W + ++A N Q ++P FAHGF+ L
Sbjct: 71 HPQDKLVRVVSGEVFDVAVDLREGSETFGKWFGIVLTAENKKQFFVPKNFAHGFIVLSDY 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTI---LPSVSEKDQNLPFLN 173
E YKVTDFY + G+ W D +I + WP+ + + +S+KD+ +
Sbjct: 131 AEFCYKVTDFYHPNDEGGILWNDPAIGVEWPMPEGMTRADLILSDKDKVHGGFD 184
>gi|71906878|ref|YP_284465.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dechloromonas aromatica RCB]
gi|71846499|gb|AAZ45995.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dechloromonas aromatica RCB]
Length = 177
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 75/171 (43%), Positives = 104/171 (60%), Gaps = 4/171 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ R F D RG+F ++++ KL + G FVQDNHS S +RGLH+Q P
Sbjct: 8 IPDVLIIEPRVFGDDRGFFYESFNQKLFNDAVGCDVTFVQDNHSKS-AKNVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLVR + G +FD+AVDIR++SPTYG WV + +SA N QI+IP G AHGF+TL
Sbjct: 67 PKEQGKLVRVVQGEVFDVAVDIRKDSPTYGRWVGVTLSAENKKQIWIPQGLAHGFLTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y+ E + + W D ++I WP+ +S KD
Sbjct: 127 TAEFLYKTTEYYAPEAERCIRWNDSKLNIKWPIEGG--ALLSVKDSMADDF 175
>gi|291534628|emb|CBL07740.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseburia intestinalis M50/1]
Length = 194
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++++ F D+RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLKVIEPAVFGDARGYFMETYNYNDFKEAGIDCQFVQDNQSASKK-GVLRGLHFQI-N 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R S T+G W + ++A N Q ++P FAHGF+ L
Sbjct: 71 HPQDKLVRVVNGEVFDVAVDLREGSETFGKWFGIVLTAENKKQFFVPKNFAHGFIVLSDY 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTI---LPSVSEKDQNLPFLN 173
E YKVTDFY + G+ W D +I + WP+ + + +S+KD+ +
Sbjct: 131 AEFCYKVTDFYHPNDEGGILWNDPAIGVEWPMPEGMTRADLILSDKDKVHGGFD 184
>gi|126662749|ref|ZP_01733748.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteria bacterium
BAL38]
gi|126626128|gb|EAZ96817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteria bacterium
BAL38]
Length = 183
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/177 (36%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I++ + +D RG+F ++++ ++ +G FVQDN SFS G +RGLH+Q
Sbjct: 7 KLKGCFIIEPKIIQDERGYFMESFNHNTFQKGVGQNVNFVQDNQSFS-SKGVLRGLHYQC 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQAKLVR + G + D+AVD+R +S TYG + ++ +SA N +Q ++P GFAHGF+ L
Sbjct: 66 DEHAQAKLVRVLQGEVLDVAVDLRPDSETYGQYEAILLSAENQMQFFVPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ YK +FY+ E + G+ + D++I+I W +S+KD+ LP L
Sbjct: 126 DSATFFYKCDNFYNKESEGGIIYNDETINIDWNFP-LQELIISDKDKVLPNLQNAKK 181
>gi|294669023|ref|ZP_06734109.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309015|gb|EFE50258.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 185
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K FVQ++HS S G +RGLH+Q
Sbjct: 13 IPEVKLLEPQVFGDARGFFMETFRDEWFKANVCDRTFVQESHSKSGK-GVLRGLHYQTEN 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G W +SA N Q+++P GFAHGF L
Sbjct: 72 T-QGKLVRVVVGEVFDVAVDMRKSSPTFGKWAGEILSAENKRQLWVPEGFAHGFYVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D S+ I WPL P++S KD LNQ
Sbjct: 131 AEFVYKCTDYYNPKAEHSLIWNDPSVGIEWPLQGE--PNLSPKDLAGRPLNQA 181
>gi|16611740|gb|AAL27325.1|AF402313_5 dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella boydii]
Length = 178
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKIFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++S T+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSTTFGKWVGVNLSAENKRQLWIPEGFAHGFITLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E IYK T FY+ + +AW D ++I W + LP VS+KD I
Sbjct: 126 NIAEFIYKTTQFYNPSFERVIAWDDPVLNINWNIK--QLPFVSKKDMKGLPFRNI 178
>gi|240144742|ref|ZP_04743343.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseburia intestinalis L1-82]
gi|257203263|gb|EEV01548.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseburia intestinalis L1-82]
Length = 194
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++++ F D+RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLKVIEPAVFGDARGYFMETYNYNDFKEAGIDCQFVQDNQSASKK-GVLRGLHFQI-N 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R S T+G W + +SA N Q ++P FAHGF+ L
Sbjct: 71 HPQDKLVRVVNGEVFDVAVDLREGSETFGKWFGIVLSAENKKQFFVPKNFAHGFIVLSDY 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTI---LPSVSEKDQNLPFLN 173
E YKVTDFY + G+ W D +I + WP+ + + +S+KD+ +
Sbjct: 131 AEFCYKVTDFYHPNDEGGILWNDPAIGVEWPMPEGMTQADLILSDKDKVHGGFD 184
>gi|89094080|ref|ZP_01167023.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Oceanospirillum sp. MED92]
gi|89081555|gb|EAR60784.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Oceanospirillum sp. MED92]
Length = 178
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++I++ R F D RG+F +T+ K E G+ FVQDNHS S G +RGLHFQR
Sbjct: 8 IADLKIIEPRVFGDERGFFLETFQEKRYATEAGISLPFVQDNHSRSSK-GVLRGLHFQRT 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G +FD+AVD+R S TYG W +E+SA N Q ++P GFAHGF+ L
Sbjct: 67 K-PQGKLVRVVSGSVFDVAVDLRAGSNTYGNWFGVELSAENKKQFWVPPGFAHGFIVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y ++ + W D + + WP + P +SEKD+ L ++
Sbjct: 126 RADFEYKCTDYYDPSDEACLKWNDPEVGVVWP---DLEPLLSEKDKQGLPLGEL 176
>gi|218558919|ref|YP_002391832.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli S88]
gi|160419866|emb|CAN87671.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli S88]
gi|218365688|emb|CAR03424.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli S88]
Length = 180
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I++ + F DSRG+F + + K ++G+ + FVQDN S S +RGLHFQ
Sbjct: 8 LAGCVIIEPKVFGDSRGFFLEAWHQKKYHDIGITEAFVQDNRSRSAR-NVLRGLHFQ-KN 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV I+G +FD+AVD+R S ++G V + +S + QIYIP GFAHGF L
Sbjct: 66 NPQGKLVSVISGEVFDVAVDLRPGSSSFGKHVGVILSGDKNNQIYIPPGFAHGFCVLSEY 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YK TDFY + G+ W DK ++I WP+ +P +S KD L ++
Sbjct: 126 ADFHYKCTDFYDPTDEGGIIWNDKELNIQWPID---MPIMSSKDNALISFSEFK 176
>gi|265764217|ref|ZP_06092785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
gi|263256825|gb|EEZ28171.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
Length = 190
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 76/179 (42%), Positives = 109/179 (60%), Gaps = 2/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + IL+ R F+D RG+F ++++ + Q FVQDN S S G IRGLHFQ+P
Sbjct: 7 SIEGLVILEPRLFQDDRGYFFESFNQWEFESNVCQTTFVQDNESKSSY-GVIRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR I G + D+AVDIR+ SPT+G VS+E++ +N Q +IP GFAHGF L
Sbjct: 66 PFAQSKLVRVIKGAVLDVAVDIRKGSPTFGKHVSVELTEDNHRQFFIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
YK +FY E + +AW D ++I W + + +S KD P L+ I+ F+
Sbjct: 126 EVIFQYKCDNFYHPEAEGAIAWNDPDLNIDWKIPQDRV-ILSGKDYTHPLLHNIELQFD 183
>gi|82701401|ref|YP_410967.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosospira multiformis ATCC
25196]
gi|82409466|gb|ABB73575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrosospira multiformis ATCC
25196]
Length = 183
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 109/176 (61%), Gaps = 3/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + F DSRG+F ++++ + ++ GL FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPEVMIIEPKVFGDSRGFFFESFNQENFRQATGLDVRFVQDNHSRSVK-GVLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVDIRR+SPT+G WV +E++ +N Q+++P GFAHGF L
Sbjct: 66 RR-PQGKLVRVVRGAVFDVAVDIRRSSPTFGHWVGVELTEDNYRQLWLPPGFAHGFYVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK T++Y + D + W D I I WP+ + P VS KD+ L +
Sbjct: 125 DIADFLYKTTEYYFSDFDRSILWNDPGIAIGWPIEAGVSPVVSSKDEKAARLVHAE 180
>gi|312882944|ref|ZP_07742676.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369463|gb|EFP96983.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 184
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
N++ +++ + D RG+F +++ + +E+G+++ FVQDN S S G +RGLH Q
Sbjct: 7 NLDGCIVIEPDVYGDERGYFFESFHEEKYREIGIKETFVQDNFSKSSK-GILRGLHSQ-L 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV G +FD+AVD+R SPT+G S+ +S N Q+YIP GFAHGF+TL
Sbjct: 65 NKPQGKLVSVTKGEVFDVAVDLRETSPTFGKHFSIVLSDKNHKQLYIPPGFAHGFLTLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK TDFY E + G+ W D +DI WP T P +S+KD+ P +
Sbjct: 125 VVHFGYKCTDFYDPEDELGILWNDADLDIDWP---TDTPQLSKKDKEQPSFQE 174
>gi|28170140|gb|AAM34819.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio vulnificus]
Length = 183
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKPTKFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SPT+G WV +S+ N Q++IP GFAHGF
Sbjct: 66 TENT-QGKLVRVVSGEVFDVAVDIRKDSPTFGQWVGEYLSSENKRQLWIPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + W D ++I WP I P++S+KD+ Q
Sbjct: 125 SEEAEFVYKCTDYYNPTAEVSLRWDDSYVNIIWPCK--ITPTLSDKDRLGLSWKQF 178
>gi|145298431|ref|YP_001141272.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851203|gb|ABO89524.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 183
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + + F D RG+F ++++ + +E G Q F+QDNHS S G +RGLH+Q
Sbjct: 7 SIPEVLIFEPQVFGDERGFFFESFNYQQFEEAVGHQVKFIQDNHSRS-SQGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRCI G +FD+AVDIR SP +G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 PPHAQGKLVRCIVGEVFDVAVDIRETSPNFGQWVGVNLSAENKRQLWIPEGFAHGFLTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E++YK T++Y H+ + W D + I WP I +S+KD P
Sbjct: 126 TAAEILYKTTNYYQPSHERSIIWNDNVLAIKWPFDKNI--ILSKKDSLAPHFIDF 178
>gi|300704901|ref|YP_003746504.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum
CFBP2957]
gi|299072565|emb|CBJ43915.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum
CFBP2957]
Length = 183
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++++++ ++ G++ FVQDNHS S G +RGLH+Q
Sbjct: 10 IPEVLILEPKVFGDDRGFFFESFNARTFEQATGVKRTFVQDNHSRSAR-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+AVD+R++SPT+G WV + +SA N Q+++P GFAHGF+
Sbjct: 68 QHPQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGVTLSAENKRQLWVPEGFAHGFVVTSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ EH+ + W D + I WP T P ++ KD L + D
Sbjct: 128 YAEFLYKTTDYWYAEHERSIVWNDPDLGIEWPAQGT--PILAAKDAAGARLARAD 180
>gi|168481379|gb|ACA24862.1| RmlC [Shigella dysenteriae]
gi|168481394|gb|ACA24876.1| RmlC [Escherichia coli]
Length = 180
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 81/172 (47%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKIFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-CKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFITLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK TDFYS +H+ + + D+SI I WP T +S KD+
Sbjct: 126 NIAEFLYKTTDFYSPKHEVCIRYDDESIGIQWP-KATDKMLISSKDKKGLDF 176
>gi|324114029|gb|EGC08002.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia fergusonii B253]
Length = 178
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 112/175 (64%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFITLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E IYK T FY+ + +AW D ++I W + LP VS+KD + I
Sbjct: 126 NIAEFIYKTTQFYNPSFERVIAWDDPVLNINWNIK--QLPFVSKKDMKGLPFSNI 178
>gi|171319432|ref|ZP_02908538.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria MEX-5]
gi|171095361|gb|EDT40340.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ambifaria MEX-5]
Length = 183
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++ K E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFYESFNGKEFAEQVEPGVEFVQDNHSRSSK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR+ SP +G WV + +S +N Q+++P GFAHGF+ L
Sbjct: 68 EHAQGKLVRVVEGEVFDVAVDIRKRSPNFGRWVGVILSNDNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ +H+ + W D I I WP+ P ++ KD LN+ D
Sbjct: 128 AAQFLYKTTDYWFPKHERSLLWNDPEIGIEWPI--DFEPLLAAKDAAGKRLNEAD 180
>gi|152978508|ref|YP_001344137.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus succinogenes
130Z]
gi|150840231|gb|ABR74202.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinobacillus succinogenes
130Z]
Length = 180
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ D RG+F +T+ + K+ FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPEVKLLEPTVLGDERGFFMETFRDEWFKQNVADRTFVQENHSKSVK-GVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVQGEVFDVAVDMRKSSPTFGQWVGEILSAENKRQLWVPEGFAHGFYVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + + W D ++ I W L+ PS+S KD L
Sbjct: 125 TAEFTYKCTDYYNPKAEHSLLWNDPTVGIMWNLVGE--PSLSTKDLAGKLLKDA 176
>gi|152994871|ref|YP_001339706.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Marinomonas sp. MWYL1]
gi|150835795|gb|ABR69771.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Marinomonas sp. MWYL1]
Length = 178
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
NI+ V I++ + F D RG+F +T+ ++ K+ G+ FVQDNHS S +RGLHFQ+
Sbjct: 7 NIDGVVIIEPKVFGDERGFFLETFQAERYKDFAGIDLPFVQDNHSRSGK-NVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+ VDIR++S TYG WV +S N Q ++P GFAHGF+ L
Sbjct: 66 TK-PQGKLVRVVRGEVFDVVVDIRKDSLTYGLWVGALLSEENKRQFWVPPGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y + + W D ++DI WP + I P +S KDQ+ L ++
Sbjct: 125 DVADFEYKCTDYYDQTDEGCLMWNDPTVDIEWP--EGIEPILSAKDQDGMALGEL 177
>gi|294645676|ref|ZP_06723363.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides ovatus SD CC 2a]
gi|292638955|gb|EFF57286.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides ovatus SD CC 2a]
Length = 179
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 2/178 (1%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V I++ R F+D RG+F +++S + E + FVQDN S S G +RGLHFQ+PPYAQ
Sbjct: 1 VVIIEPRLFKDDRGYFFESFSQREFTEKVRKVDFVQDNESKSSY-GVLRGLHFQKPPYAQ 59
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
+KLVR I G + D+AVDIR+ SPT+G V++E++ N Q +IP GFAHGF+ L
Sbjct: 60 SKLVRVIKGSVLDVAVDIRKGSPTFGEHVAVELTEENHRQFFIPRGFAHGFVVLTEEVIF 119
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDG 183
YK +FY+ + + +AW D ++ I W + + +SEKD++ L + F+Y+
Sbjct: 120 QYKCDNFYAPQCEGALAWDDPALKIDWKVPADKI-ILSEKDKHHERLEEASWLFDYNE 176
>gi|307130156|ref|YP_003882172.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii 3937]
gi|306527685|gb|ADM97615.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dickeya dadantii 3937]
Length = 178
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ + F D+RG+F +T+ +E L + FVQDNHS S G +RGLHFQ
Sbjct: 8 IQGVKIIQPKVFGDARGFFLETFEKNRYQEMLDIDLDFVQDNHSRSAK-GVLRGLHFQ-T 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+ VDIR +SP+YG W + +S N Q +IP G AHGF+ L
Sbjct: 66 TNPQGKLVRVVRGEVFDVVVDIRPDSPSYGRWEGVVLSEENKTQFWIPPGLAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y+ H+ + W D I I WP+ P +SEKD+ ++
Sbjct: 126 LADFEYKCTDYYNPAHEGCLLWNDADIAIDWPI---ATPLLSEKDKKGKAFKEL 176
>gi|303238695|ref|ZP_07325228.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetivibrio cellulolyticus
CD2]
gi|302593814|gb|EFL63529.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acetivibrio cellulolyticus
CD2]
Length = 182
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 79/172 (45%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++++ F DSRG+F ++Y+ +ELGL FVQDNHS S G +RG+HFQ
Sbjct: 11 IRDLVIIESKVFGDSRGFFMESYNKASFEELGLNMEFVQDNHSKS-KKGVLRGIHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ KLVR I GR++D+AVD+R+ S T+G W ++E++ N YIP GF H F+T+E +
Sbjct: 69 YAQGKLVRVIKGRVYDVAVDLRKGSETFGKWYAIELTEENKTMFYIPEGFGHAFLTMEDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
TE YK T+ Y E+D+G+ ++DK I I WP +SEKD+ LP L +
Sbjct: 129 TEFSYKTTNIYHPEYDAGIIYKDKDIAIDWP-NIGCEFILSEKDKVLPSLKE 179
>gi|313676578|ref|YP_004054574.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Marivirga tractuosa DSM 4126]
gi|312943276|gb|ADR22466.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Marivirga tractuosa DSM 4126]
Length = 192
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + I++ +EDSRG+F +++ K ++ G++ FVQDN S S G IRGLH Q
Sbjct: 16 DFDDLFIIEPTVYEDSRGYFFESFHQKKFEDATGIKCEFVQDNQSRS-LHGVIRGLHMQV 74
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP AQAKLVR + G + D+ VD+R++ PT+G S+ +SA N Q++IP GFAHG L
Sbjct: 75 PPMAQAKLVRVLRGEVLDVVVDLRKDKPTFGKSFSIHLSAENKQQLFIPRGFAHGIAVLS 134
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK ++YS E++ G+ + D S++I W + D+ +SEKDQ SPF
Sbjct: 135 KEAEFFYKCDNYYSPENERGIIYNDASLNIDWKI-DSEKRIISEKDQKNLDFFSFSSPF 192
>gi|91776362|ref|YP_546118.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacillus flagellatus
KT]
gi|91710349|gb|ABE50277.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacillus flagellatus
KT]
Length = 182
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + + + F D+RG+F ++++ K +E G + FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVIVFEPKIFGDARGFFFESFNQKAFEEAVGRKYDFVQDNHSKSSK-GVLRGLHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR +AG +FD+AVDIR++SPT+G WV +SA N Q+++P GFAHGF+ L
Sbjct: 67 Q-AQGKLVRVVAGEVFDVAVDIRKSSPTFGQWVGQHLSAENKKQMWVPPGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TDFY+ H+ ++W D + I WP P +S KDQ L+Q +
Sbjct: 126 TAEFLYKTTDFYAPAHERCLSWNDPVVGIEWP-DIGTPPLLSSKDQQGLGLHQTE 179
>gi|146298097|ref|YP_001192688.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacterium johnsoniae
UW101]
gi|146152515|gb|ABQ03369.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacterium johnsoniae
UW101]
Length = 182
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 78/177 (44%), Positives = 111/177 (62%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ F D RG+F ++YS ++L + FVQDN SFS GT+RGLH+Q PP
Sbjct: 8 IKDLLIVEPTIFGDERGYFFESYSKTKFEDLDIHIDFVQDNQSFSKR-GTLRGLHYQNPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVR + G I D+AVD+R++S TYG S+ +S+ N Q+ +P GFAHGF +
Sbjct: 67 FAQTKLVRVLEGEIIDVAVDLRKDSATYGKVFSVLLSSENKKQLLVPQGFAHGFSVISET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V+YK FY+ + G+ + D S++I W + D VSEKDQ LPFL+ +S F
Sbjct: 127 ASVMYKCDQFYNKASEGGIRFDDSSLNIDWGM-DLKDAIVSEKDQKLPFLDNCNSLF 182
>gi|93005456|ref|YP_579893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychrobacter cryohalolentis
K5]
gi|92393134|gb|ABE74409.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychrobacter cryohalolentis
K5]
Length = 177
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V I++ + F D RG+F +T++++ KE G+ FVQDNHS S G +RGLHFQ+
Sbjct: 7 KLAGVLIIEPKIFGDYRGFFKETFNAERYKELAGIDLTFVQDNHSRSGK-GVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLV G ++D+A DI S TYG +V +E+S +N Q+++P G+AHGF+ +
Sbjct: 66 TK-PQGKLVSVTLGAVYDVAADINPESSTYGEYVGVELSEDNHRQLWVPPGYAHGFLVMS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ +YK TD+Y + G+AW ++I WP+ D +S+KD+ L
Sbjct: 125 DEVDFVYKCTDYYDPTDEGGIAWNCPLLNIDWPISDVK---LSDKDKAYAGLE 174
>gi|297171427|gb|ADI22429.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[uncultured Rhodospirillales bacterium HF0500_02H05]
Length = 205
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 1/195 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + + D+RG F++T+ ++ VQ+N S S T+RGLH+Q
Sbjct: 9 EIQGPVLFVPNRHRDARGVFAETFRVDEFRDAIGDVDLVQENQSISHPINTVRGLHYQAE 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q KL+R + G + D+AVDIR +SPT+G + +E+SA N Q++IP GFAHGF TL
Sbjct: 69 PHVQGKLMRVLQGAVLDVAVDIRPHSPTFGRHIKIELSAENWYQLWIPPGFAHGFKTLRP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T V+YKV+D+YS HD G+AW D + I W L VS+KD+ P + + F
Sbjct: 129 DTHVMYKVSDYYSPSHDHGIAWNDADLGIDWEL-YGQQAVVSDKDRQQPRFCDVTAQFMA 187
Query: 182 DGLPLLSLNMERDLL 196
+P +++
Sbjct: 188 GSIPPSDATLQQGRY 202
>gi|309378566|emb|CBX22838.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 185
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFTDGRGFFMETFRDGWFKENIADRTFVQENHSQSRK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWTGATLSAQNQYQLWIPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D +I I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYKPEAEQVLIWNDPAIGIGWPL--QTTPLLSPKDLAGKTWAQAEK 178
>gi|297620313|ref|YP_003708450.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Waddlia chondrophila WSU
86-1044]
gi|297375614|gb|ADI37444.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Waddlia chondrophila WSU
86-1044]
Length = 175
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V ++ K ED RG+F++T+ S+ +E GL+ FVQ N SFS + GT+RG+H+Q PP
Sbjct: 8 LEGVFLINLEKREDERGFFARTFCSEEFREKGLETAFVQANDSFSIEQGTLRGMHYQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLVRCI G ++D +D+R +SPT+G +SA+N +Y+P GFAHGF+TLE
Sbjct: 68 FAETKLVRCIKGSLYDAVLDLREDSPTFGQSFGTILSADNRTMMYVPRGFAHGFLTLEPY 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
TEV Y V+ YS + + G+ W D +I+WP +SE+D + P
Sbjct: 128 TEVYYLVSAPYSPKFERGIRWNDPRFNISWPEPPR---VISERDNSHPDF 174
>gi|186684649|ref|YP_001867845.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc punctiforme PCC 73102]
gi|186467101|gb|ACC82902.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc punctiforme PCC 73102]
Length = 181
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V L+ + F D RG+F + Y+ + E G+ FVQDNHS S +RGLH+Q
Sbjct: 7 KIPEVLQLEPKVFADDRGFFFEAYNDRKFAQETGIVANFVQDNHSCSKQ-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G IFD+AVDIR++S T+G WV+ E+SA N ++IP GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRAVVGTIFDVAVDIRKSSTTFGKWVAYELSAENKRLLWIPPGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD+Y+ + D + W D + I WPL P +S KDQ +L +
Sbjct: 125 EVAEVLYKATDYYAPQGDRTILWNDPDLAIDWPLS--ASPILSAKDQAGKYLRTAE 178
>gi|260890572|ref|ZP_05901835.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptotrichia hofstadii F0254]
gi|260859814|gb|EEX74314.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptotrichia hofstadii F0254]
Length = 190
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + F D RG+F +TY+ K +ELGL FVQDNHS S G +RGLHFQ
Sbjct: 11 IKDLVIIEPKVFGDERGFFMETYNQKSFEELGLTMNFVQDNHSKS-KKGVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G ++D+AVD+R+ S T+G W ++++SA N L Y+P GFAHGF+TLE
Sbjct: 69 HTQGKLVRVIKGSVYDVAVDLRKGSETFGKWYAVKLSAENKLMFYVPEGFAHGFLTLEDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDSP 178
TE +Y+ TD Y+ E+DSG+ W DK+++I W + ++SEKD+ ++ +
Sbjct: 129 TEFVYRCTDLYAPEYDSGLLWSDKTLNIDWKFEEFEINPNELTISEKDKVQQKFDKNKNY 188
Query: 179 FE 180
FE
Sbjct: 189 FE 190
>gi|29726031|gb|AAO88956.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 175
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 74/166 (44%), Positives = 109/166 (65%), Gaps = 4/166 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ + F D RG+F ++++ + + G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKIIEPKVFGDERGFFFESFNQQQFEAAVGYPVHFVQDNHSKS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+AQAKLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 APHAQAKLVRCVVGEVFDVAVDIRKSSPTFGQWVGVHLSAENKRQLWIPEGFAHGFVTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
E +YK T++YS + + + W D + I WP+ + S+KD
Sbjct: 126 ETAEFLYKTTNYYSPQCEGAIRWDDSKVGIEWPVEGVVN--QSQKD 169
>gi|241662193|ref|YP_002980553.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12D]
gi|240864220|gb|ACS61881.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12D]
Length = 183
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
V IL+ + FED RG+F +++++K + G FVQDNHS S +RGLH+Q
Sbjct: 10 FPEVLILEPKVFEDQRGFFHESFNAKDFEAATGSSHAFVQDNHSRSLR-NVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR AG +FD+AVDIR+ SP +G WV +SA N Q++IP GFAHGF+
Sbjct: 68 RQPQGKLVRVTAGEVFDVAVDIRKKSPNFGRWVGAILSAENKRQLWIPEGFAHGFVVTSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+++YK TD++ E++ +AW D + I WP+ + VS KD L +
Sbjct: 128 QADLLYKTTDYWHPEYERAIAWNDPQLGIAWPIQGEV--IVSAKDAAASLLENAE 180
>gi|218699370|ref|YP_002406999.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli IAI39]
gi|253773030|ref|YP_003035861.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162030|ref|YP_003045138.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Escherichia coli B str.
REL606]
gi|297520371|ref|ZP_06938757.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli OP50]
gi|300930355|ref|ZP_07145766.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 187-1]
gi|218369356|emb|CAR17114.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli IAI39]
gi|224613067|dbj|BAH24286.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli B]
gi|242377690|emb|CAQ32450.1| ybl99 [Escherichia coli BL21(DE3)]
gi|253324074|gb|ACT28676.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973931|gb|ACT39602.1| dTDP-4-dehydrorhamnose 3,5-epimerase (RmlC) [Escherichia coli B
str. REL606]
gi|253978125|gb|ACT43795.1| dTDP-4-dehydrorhamnose 3,5-epimerase (RmlC) [Escherichia coli
BL21(DE3)]
gi|300461755|gb|EFK25248.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli MS 187-1]
Length = 181
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G IRGLHFQ
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVIRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PPY+QAKLVRC+ G ++D+ VDIR++S T+G WV + +SA N Q++IP GFAHGF +
Sbjct: 66 PPYSQAKLVRCVVGEVYDVVVDIRKDSKTFGKWVGVNLSAENKRQLWIPEGFAHGFEVIS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+YK ++Y+ + G+ W D+ + I W +SEKD P ++
Sbjct: 126 EVAHFLYKTNNYYNATMEKGIRWDDEYLAINW---KEKKAIISEKDMKQPSFREL 177
>gi|299067777|emb|CBJ38987.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum CMR15]
Length = 183
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++++++ +++ G++ FVQDNHS S +RGLH+Q
Sbjct: 10 IPEVLILEPKVFGDDRGFFFESFNARAFEQVTGVKRNFVQDNHSRSAR-NVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+AVD+R++SPT+G WV + +SA N Q+++P GFAHGF+
Sbjct: 68 QHPQGKLVRVTVGEVFDVAVDLRKSSPTFGKWVGVTLSAENKRQLWVPEGFAHGFVVTSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ EH+ + W D I I WP+ T P ++ KD D
Sbjct: 128 YAEFLYKTTDYWYAEHERSIVWNDPDIGIEWPVQGT--PILAAKDAAGARFASAD 180
>gi|150026507|ref|YP_001297333.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacterium psychrophilum
JIP02/86]
gi|149773048|emb|CAL44532.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacterium psychrophilum
JIP02/86]
Length = 183
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
N+ +L+ + F D RG+F ++++ ++ +G F+QDN S+S G +RGLH+Q
Sbjct: 7 NLAGCFVLEPKIFHDDRGYFMESFNENTFEKGIGQNVHFIQDNQSYS-SKGVLRGLHYQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQAKLVR + G + D+AVDIR SPTYG S+ +SA N Q+YIP GFAHGF+
Sbjct: 66 GAHAQAKLVRVLQGEVLDVAVDIRPQSPTYGQSFSILLSAENQKQLYIPRGFAHGFLVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
YK +FY+ E + G+ + D +++I W + L +SEKD LP L
Sbjct: 126 ETATFFYKCDNFYNKESEGGLIYNDPTLNIDWNFPEKEL-IISEKDIILPTLENAKK 181
>gi|91215488|ref|ZP_01252459.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychroflexus torquis ATCC
700755]
gi|91186440|gb|EAS72812.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychroflexus torquis ATCC
700755]
Length = 182
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+N I++ + FED RG F +T++SK K+ GL VFVQDN S S GTIRGLHFQ
Sbjct: 8 LNDCFIIEPKVFEDERGSFFETFNSKDFKKNTGLNIVFVQDNQSIS-HYGTIRGLHFQEG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKL+R G + D+ VD+R NS TY S +S N Q+++P GFAHGF +L
Sbjct: 67 EFAQAKLIRVAKGEVLDVVVDMRPNSSTYLKQFSYLLSGENNHQLFVPRGFAHGFTSLSN 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
YK +FY+ +SG+ + DK+++I W + VSEKDQNLP L+
Sbjct: 127 EVVFDYKCDNFYNKASESGIVFNDKALNIDWKIPKDDQ-IVSEKDQNLPSLD 177
>gi|282858700|ref|ZP_06267854.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bivia JCVIHMP010]
gi|282588504|gb|EFB93655.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bivia JCVIHMP010]
Length = 184
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F+D RG+F +++ + +G F+QDN S S G +RGLH+Q+
Sbjct: 8 IKGVWVIEPKIFKDDRGYFFESFRQDEFDRNVGYHVEFIQDNESKS-SYGVLRGLHYQQG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKLVR I G++ D+AVD+RR+S TYG +V++E+S N Q +IP GFAHGF+ L
Sbjct: 67 EFSQAKLVRVIKGKVIDVAVDLRRSSLTYGKYVAVELSDENKRQFFIPRGFAHGFLVLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ-NLPFLNQI 175
YKV + Y+ + ++ V W D++I I WP+ D +SEKD L +
Sbjct: 127 EAIFTYKVDNIYAPQSEASVRWNDETIGIDWPI-DPKDVVLSEKDLTKGLSLAEA 180
>gi|226323946|ref|ZP_03799464.1| hypothetical protein COPCOM_01723 [Coprococcus comes ATCC 27758]
gi|225207495|gb|EEG89849.1| hypothetical protein COPCOM_01723 [Coprococcus comes ATCC 27758]
Length = 190
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 77/172 (44%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ D RG+F +TY+ K ++E GL FVQDN S S +RGLHFQ
Sbjct: 22 IEGLCVIEPSVHGDQRGYFMETYNQKDMEEAGLTMKFVQDNQSGSGK-AVLRGLHFQ-KK 79
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I G +FD+AVDIR+ S TYG W +E+S N Q YIP GFAHGF+ L
Sbjct: 80 YPQGKLVRVIRGTVFDVAVDIRKGSATYGKWYGIELSEENKKQFYIPEGFAHGFLVLSDQ 139
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E YK TDFY + + G+AW D +I++ WP + +SEKD+ L +
Sbjct: 140 AEFCYKCTDFYHPDDEGGIAWNDPTINVAWP-ELDVPYRMSEKDKKWGRLGE 190
>gi|167623420|ref|YP_001673714.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella halifaxensis
HAW-EB4]
gi|167353442|gb|ABZ76055.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella halifaxensis
HAW-EB4]
Length = 184
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 79/179 (44%), Positives = 110/179 (61%), Gaps = 6/179 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPDVKIIEPSVFGDERGFFMETWNQKKFEELVTGKPTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR+ SPT+G WV +SA+N Q+++P GFAHGF
Sbjct: 66 IENT-QGKLVRVVSGEVFDVAVDIRKGSPTFGQWVGEYLSADNKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E +YK TDFY+ + + + W D+S+ I WPL +P +SEKD N I S
Sbjct: 125 SNEAEFVYKCTDFYNPKAEISLFWADESLAINWPLSG--IPMLSEKDINGITFETIISN 181
>gi|46445758|ref|YP_007123.1| dTDP-4-dehydrorhamnose 3,5-epimerase, rfbC [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399399|emb|CAF22848.1| probable dTDP-4-dehydrorhamnose 3,5-epimerase, rfbC [Candidatus
Protochlamydia amoebophila UWE25]
Length = 184
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + ++++K F+D+RG+F +++ L +++G+Q+ F+QDNHSFS RG+HFQ
Sbjct: 6 LQLKGLKLVKPNVFKDNRGFFLESFQQPLYQKMGIQETFLQDNHSFSQKGCI-RGMHFQS 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAKLVR G+I+D+AVDIR SPT+G W + + Q++IP GFAHGF L
Sbjct: 65 FP-GQAKLVRVAVGKIYDVAVDIRPESPTFGQWEGIILDDKKHHQLFIPVGFAHGFCVLS 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V+YKV+ Y ++ G W D ++I WP+ P VSE+D+ P +
Sbjct: 124 QEAHVMYKVSTPYDPLYEKGFRWNDSQLNIQWPIE---QPIVSERDKQSPSFRE 174
>gi|220909658|ref|YP_002484969.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7425]
gi|219866269|gb|ACL46608.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7425]
Length = 181
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 75/176 (42%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ + + D RGWF ++++++ +E GL FVQDNHS+S +RGLH+Q
Sbjct: 7 EIPEVLILEPQVYGDQRGWFYESFNTRTFQEKTGLAVDFVQDNHSYSQHH-VLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR +AG +FD+AVD+R++S T+G WV +E+S N Q++IP+GFAHGF+ L
Sbjct: 66 QQ-PQGKLVRAVAGMVFDVAVDLRKSSRTFGQWVGVELSGENHRQLWIPSGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+YK TD+Y+ ++D + W D + I WPL T +S KDQ + +
Sbjct: 125 ETAEVLYKTTDYYAPQYDRCLLWNDPDLAIAWPLTGT--AILSAKDQAGLPWGKAE 178
>gi|319902158|ref|YP_004161886.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides helcogenes P
36-108]
gi|319417189|gb|ADV44300.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides helcogenes P
36-108]
Length = 182
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + F D+RG+F + + + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPKVFSDARGYFMEAFKEEEFRIHVGDVHFIQDNESKSSF-GVLRGLHYQQG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR + GR+ D+AVD+RR+S T+G +VS+E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVLKGRVLDVAVDLRRSSSTFGKYVSVELSEENKRQFFIPRGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YKV + Y+ + ++ + + D++I I WP+ + L +S+KD++ N
Sbjct: 126 EAVFTYKVDNAYAPQAEASIRFNDETIGIEWPVSEKQL-LLSDKDEHAVSFNDA 178
>gi|325275469|ref|ZP_08141397.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas sp. TJI-51]
gi|324099400|gb|EGB97318.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas sp. TJI-51]
Length = 181
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ + DSRG+F + ++++ + G+ FVQDNHS S G +RGLHFQ
Sbjct: 7 EIPDVLIIEPTVYGDSRGFFFEAFNAREFARQTGVNVEFVQDNHS-SSVKGVLRGLHFQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G I D+A+D+R++SPT+G WV++++SA N Q++IP GFAHGF L
Sbjct: 66 ENT-QGKLVRVVQGEIRDVALDVRKSSPTFGQWVAVDLSAANHRQLWIPAGFAHGFAVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD+Y+ D + W D + I W L P +S+KD+ + +
Sbjct: 125 ESAEFLYKTTDYYNPGADRCIRWDDPHLAIDWGL--QQPPLLSDKDKLGRAWAEAE 178
>gi|188994411|ref|YP_001928663.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas gingivalis ATCC
33277]
gi|47080240|dbj|BAD18849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas gingivalis]
gi|188594091|dbj|BAG33066.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas gingivalis ATCC
33277]
Length = 196
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ R F D RG+F +++S + ++ FVQDN S S G +RGLHFQ+P
Sbjct: 7 EIPEVVILEPRLFRDDRGYFFESFSRQEIETGIRPINFVQDNESASRY-GVLRGLHFQKP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR + G + D AVDIR SPT+G +V++E+S N Q++IP GFAHGF+ L
Sbjct: 66 PHAQSKLVRVVRGCVIDYAVDIRFGSPTFGKYVAVELSDTNFRQLFIPRGFAHGFVVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK ++Y+ + + +AW D ++DI W + + +S KDQ P ++ S ++
Sbjct: 126 EVVFQYKCDNYYAPQSEGAIAWNDSNLDIDWKIPVEDI-ILSAKDQANPSWTELISSEDF 184
Query: 182 DGLPLLSLNMER 193
L + ++
Sbjct: 185 RNLFPYNQDLYE 196
>gi|52840993|ref|YP_094792.1| dTDP-6-deoxy-D-glucose-3,5-epimerase RmlC [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54296783|ref|YP_123152.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella pneumophila str.
Paris]
gi|52628104|gb|AAU26845.1| dTDP-6-deoxy-D-glucose-3,5-epimerase RmlC [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53750568|emb|CAH11970.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella pneumophila str.
Paris]
gi|307609552|emb|CBW99052.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella pneumophila 130b]
Length = 187
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 9/188 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ ++I++ + + D RG+F +++ +K +EL G+ D FVQDN S S G +RGLH+Q
Sbjct: 8 IDELKIIEPKIYGDERGFFYESFQAKRYEELLGITDRFVQDNFSRSQK-GVLRGLHYQ-S 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV +AG +FD+AVDIR SPT+G WV + +S N Q +IP GFAHGF L
Sbjct: 66 QQTQGKLVSVLAGEVFDVAVDIRLGSPTFGQWVGVILSGENKRQFWIPKGFAHGFYVLSA 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ YK TD+Y E + + + D + I WPL +S KD LN ID+
Sbjct: 126 MADFAYKCTDYYHPESEFSIHYLDPQLAIDWPL--GEQVQLSPKDAAAKLLNLIDA---- 179
Query: 182 DGLPLLSL 189
+ LP
Sbjct: 180 ELLPRYQA 187
>gi|17545404|ref|NP_518806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia solanacearum
GMI1000]
gi|17427696|emb|CAD14215.1| probable dtdp-4-dehydrorhamnose 3,5-epimerase protein [Ralstonia
solanacearum GMI1000]
Length = 183
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++++++ +++ G++ FVQDNHS S +RGLH+Q
Sbjct: 10 IPEVLILEPKVFGDDRGFFFESFNARAFEQVTGVKRTFVQDNHSRSAR-NVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+AVD+R+ SPT+G WV + +SA N Q+++P GFAHGF+
Sbjct: 68 QHPQGKLVRVTVGEVFDVAVDLRKRSPTFGKWVGVTLSAENKRQLWVPEGFAHGFVVTSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD++ EH+ + W D + I WP+ T P ++ KD D
Sbjct: 128 HAEFLYKTTDYWYAEHERSIVWNDPDLGIEWPVQGT--PVLAAKDAAGARFASAD 180
>gi|261400014|ref|ZP_05986139.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria lactamica ATCC
23970]
gi|269210232|gb|EEZ76687.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria lactamica ATCC
23970]
Length = 185
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++LK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLKPQVFKDGRGFFMETFRDGWFKENIADRTFVQENHSQSRK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNRYQLWIPEGFAHGFYVLGDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D +I I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYKPEAEQVLIWNDPAIGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|54293740|ref|YP_126155.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella pneumophila str.
Lens]
gi|53753572|emb|CAH15027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella pneumophila str.
Lens]
Length = 187
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 7/183 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ ++I++ + + D RG+F +++ +K +EL G+ D FVQDN S S G +RGLH+Q
Sbjct: 8 IDELKIIEPKIYGDERGFFYESFQAKRYEELLGITDRFVQDNFSRSQK-GVLRGLHYQ-S 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G + D+AVDIR SPT+G WV + +S N Q +IP GFAHGF L
Sbjct: 66 QQTQGKLVSVLTGEVLDVAVDIRLGSPTFGQWVGVILSGENKRQFWIPKGFAHGFYVLSA 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN--QIDSPF 179
+ YK TD+Y E + + + D + I WPL +S KD L+ +
Sbjct: 126 MADFAYKCTDYYHPESEFSIHYLDPQLAIDWPL--GEQVQLSPKDAAAKPLSLIDAELLP 183
Query: 180 EYD 182
Y
Sbjct: 184 RYQ 186
>gi|323345500|ref|ZP_08085723.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella oralis ATCC 33269]
gi|323093614|gb|EFZ36192.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella oralis ATCC 33269]
Length = 182
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ F D+RG+F + + + + F+QDN S S G +RGLH+QR
Sbjct: 7 EIQGVWIIEPEVFNDTRGYFFEVWKQSDFNKHIGEIHFIQDNESKSAF-GVLRGLHYQRG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G++ D+AVDIRR+SPT+G ++ +E+S +N Q +IP GFAHGF+ L
Sbjct: 66 TYSQAKLVRVIKGKVLDVAVDIRRSSPTFGKYIMVELSDDNKKQFFIPRGFAHGFLVLSN 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ +H++ + W D ++I WP+ D S+KD P L +
Sbjct: 126 EAIFTYKVDNAYAPQHEANICWNDPELNIKWPI-DPAKIITSQKDLAAPLLKNAE 179
>gi|302880019|ref|YP_003848583.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gallionella capsiferriformans
ES-2]
gi|302582808|gb|ADL56819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gallionella capsiferriformans
ES-2]
Length = 181
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 104/175 (59%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + IL+ + F D RG+F ++++ + EL G FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDLLILEPKVFGDDRGFFYESFNRQKFSELTGRDADFVQDNHSRSVK-GVLRGLHYQI- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ QAKLVR + G + D+AVDIR++SPT+G V+LE+SA N +IP GFAHGF+ L
Sbjct: 66 QHPQAKLVRVVQGAVLDVAVDIRKSSPTFGQHVALELSAENKRMFWIPEGFAHGFVVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD++ E + + W D I I W + P++S KD L +
Sbjct: 126 TAEFLYKTTDYWYPEFERSIVWDDPEIAIDWQV--QAPPALSAKDLQGKSLAGAE 178
>gi|241668047|ref|ZP_04755625.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876582|ref|ZP_05249292.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254842603|gb|EET21017.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 190
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/181 (45%), Positives = 113/181 (62%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKL-LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
NI V I + + D RG+F +T+ LG + F QDN S S G +RGLH+Q
Sbjct: 7 NIEGVVICEPKVHGDERGYFVETFREDKLFDFLGYKINFCQDNESKS-SYGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR I GR+ D+AVDIR+ SPT+G V++E+SA+N Q+ +P GFAHGF+ LE
Sbjct: 66 PPHAQTKLVRVIQGRVLDVAVDIRKGSPTFGQHVAVELSADNKRQLLVPRGFAHGFVVLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T YKV +YS E D G+A+ D+SI I W + L +S KD+ P LN+ F+
Sbjct: 126 NDTIFSYKVDSYYSPECDRGIAFDDESIAINWQVPSDKL-KLSAKDKVQPKLNETVDLFD 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|325859589|ref|ZP_08172722.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella denticola CRIS
18C-A]
gi|327314390|ref|YP_004329827.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella denticola F0289]
gi|325482869|gb|EGC85869.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella denticola CRIS
18C-A]
gi|326945833|gb|AEA21718.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella denticola F0289]
Length = 184
Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 108/176 (61%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V +++ + F D+RG+F +++ + E G F+QDN S S G +RGLH+Q+
Sbjct: 7 DIEGVWVIEPKVFNDARGYFFESFKQREFDEHIGHHVEFIQDNESKS-GYGVLRGLHYQQ 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++QAKLVR I G++ D+AVDIR++SPT+G +V +E+S +N Q +IP GFAHGF+ L
Sbjct: 66 GEFSQAKLVRVIKGKVVDVAVDIRKSSPTFGKYVMVELSEDNKRQFFIPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN-LPFLNQI 175
YKV + Y + ++ + W D++I I WP+ D +S+KD N L
Sbjct: 126 DEAIFTYKVDNAYDPQSEASIRWDDETIGINWPV-DAKDVVLSDKDLNKGLALKDA 180
>gi|281419878|ref|ZP_06250877.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella copri DSM 18205]
gi|281406005|gb|EFB36685.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella copri DSM 18205]
Length = 184
Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 106/178 (59%), Gaps = 4/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +++ R FED+RG+F + + G VFVQDN S S G +RGLH+Q
Sbjct: 6 IEIEGVWLIEPRVFEDARGYFFEAWKQADFDAHVGGHVVFVQDNESMSAR-GVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ ++QAKLVR I GR+ D+AVD+R+ S T+G +V +E+S N Q +IP GFAHGF+ L
Sbjct: 65 KGEFSQAKLVRVIKGRVLDVAVDLRKGSKTFGKYVMVELSGENKRQFFIPRGFAHGFLVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ-NLPFLNQID 176
YKV + Y+ ++++ + W D +I I WP+ + + SEKD+ + D
Sbjct: 125 SDEAIFTYKVDNVYAPDYEASIHWDDPTIGIKWPI-EGVEVLTSEKDRTKAKSFEEAD 181
>gi|85713612|ref|ZP_01044602.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Nitrobacter sp.
Nb-311A]
gi|85699516|gb|EAQ37383.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Nitrobacter sp.
Nb-311A]
Length = 184
Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
I++ R F D RG+F +TY E G+ FVQDN S S G +RGLH Q P+
Sbjct: 9 PEAVIIEPRLFGDQRGFFLETYQFPRYSEHGVACPFVQDNLSRSAR-GVLRGLHLQ-NPF 66
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
Q KLV + G++ D+AVD+R SP +G V++E+S N Q+++P GFAHGF+ L
Sbjct: 67 PQGKLVTVLRGKVLDVAVDVRVGSPNFGRHVAVELSDENRRQLWVPRGFAHGFVVLSETA 126
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ YK D YS +++ + W D +I I W + PS+S KD + P L ++ + Y
Sbjct: 127 DFFYKCDDLYSPKNELSIRWNDPAIGIDWGVE---TPSLSAKDADAPLLAEVKNLPLY 181
>gi|302551386|ref|ZP_07303728.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
viridochromogenes DSM 40736]
gi|302469004|gb|EFL32097.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
viridochromogenes DSM 40736]
Length = 198
Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ + + + F DSRG F + + + L E G Q N S S GT+RG+HF
Sbjct: 5 LSISGAWVHEPKVFPDSRGSFHEWFKAPLFTEAVGHPLKLAQANMSVS-ARGTLRGIHFA 63
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V+C+ G + D+ VDIR SPT+G W + + + +Y+ G HGFM L
Sbjct: 64 DVPPSQAKYVKCVRGAVLDVVVDIRTGSPTFGQWELVRLDDRDHHALYLSEGLGHGFMAL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V+Y ++ Y+ E + G+ D ++ I WP I P +S KD+ P L +
Sbjct: 124 TDDATVVYLCSEGYAPEREHGIQPLDPALGIDWP--ADITPLLSGKDEQAPTLAEA 177
>gi|297194408|ref|ZP_06911806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
pristinaespiralis ATCC 25486]
gi|197718783|gb|EDY62691.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
pristinaespiralis ATCC 25486]
Length = 210
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + + + F DSRG F + + K G Q N S S GT+RG+HF
Sbjct: 15 LSITGAWVHEPKIFPDSRGSFHEWFKEGDFAKAAGHGLRLAQANCSVS-SRGTLRGVHFA 73
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V+C+ G + D+ VDIR SPT+G W ++ + + +Y+ G H FM L
Sbjct: 74 DVPPSQAKYVKCVRGTVLDVVVDIRVGSPTFGKWEAVRLDDVDHRSVYLSEGLGHAFMAL 133
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y ++ Y+ E + G+ D + I WP I P +S+KD P L + +
Sbjct: 134 TDDATVVYLCSEGYAPEREHGIDPLDPGLGIEWP--QDITPVLSDKDAAAPSLAEAE 188
>gi|257456603|ref|ZP_05621798.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema vincentii ATCC
35580]
gi|257446023|gb|EEV21071.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema vincentii ATCC
35580]
Length = 178
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ + F D+RG+F +++S + G+ FVQDN S S G +RGLHFQ
Sbjct: 10 IAGLYEIQPKVFSDNRGYFFESWSQRDFAAAGITYTFVQDNQSKSSK-GVLRGLHFQ-KE 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q KLVR ++G +FD+AVDIRR S T+G W + +SA Q +I GFAHGF+ L
Sbjct: 68 YSQGKLVRVLSGEVFDVAVDIRRGSATHGKWYGVVLSAERKNQFFISPGFAHGFLVLSDE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
YK TDFY E + G+ W D +I I WP + SEKD P
Sbjct: 128 AVFAYKCTDFYHPEDEGGIMWNDPAIGIEWP-KLDVPYIFSEKDTKYPAF 176
>gi|325203205|gb|ADY98658.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M01-240355]
Length = 179
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++LK + F D RG+F +T+ K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLKPQVFTDGRGFFMETFRDGWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
TE+ YK TD+Y E + + W D ++ I WPL P++S KD L +
Sbjct: 126 TELTYKCTDYYKPEAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 176
>gi|163789264|ref|ZP_02183706.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteriales bacterium
ALC-1]
gi|159875479|gb|EDP69541.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteriales bacterium
ALC-1]
Length = 181
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I+K + +D RG+F + Y+ K E G++ FVQDN S S G +RGLH+Q
Sbjct: 7 KLKGCFIIKPQVIKDKRGYFIENYNQKTFNEALGIEINFVQDNESLS-TKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
YAQAKLVR I G++ D+ VD+R S T+G +++E+S N +++P GFAHGF+ LE
Sbjct: 66 GKYAQAKLVRVIKGKVLDVVVDLRPKSSTFGEHLTIELSEKNMTHLFVPRGFAHGFLVLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T YK +FY+ ++G+ + DK ++I W L L +S KD+ LP
Sbjct: 126 NQTIFSYKCDNFYNKTSEAGIIYNDKDLNINWELSKKEL-IISNKDKILPKFKDAK 180
>gi|2828670|gb|AAC00178.1| putative dTDP-4-dehydrorhamnose 3,5 epimerase [Serratia marcescens]
Length = 177
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 62/173 (35%), Positives = 98/173 (56%), Gaps = 6/173 (3%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
V++++ + F D RG+F +T+ +EL G+ FVQDNHS S G +RGLHFQ
Sbjct: 9 EGVKLIEPKVFGDQRGFFLETFQKSRYQELLGIDAEFVQDNHSRSAR-GVLRGLHFQTAK 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G ++D+ VDIR SPT+ V + +S N Q+++P G AHGF+ + +
Sbjct: 68 -PQGKLVRVVRGEVYDVVVDIRPESPTFKKRVGVYLSEENKNQLWVPPGLAHGFVVVSDS 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y ++ + W D + + WP+ + P +S KD ++
Sbjct: 127 VDFEYKCTDYYDPSNEGCLLWNDPEVGVEWPVSE---PLLSPKDLQGKLFREL 176
>gi|171463076|ref|YP_001797189.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192614|gb|ACB43575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 186
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 77/178 (43%), Positives = 113/178 (63%), Gaps = 4/178 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ + F D RGWF+++++++ + GL FVQDNHSFS T+RGLH+Q
Sbjct: 12 IHDVFIVEPKVFGDERGWFTESFNAEDFAKATGLDVRFVQDNHSFSRQW-TLRGLHYQME 70
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AG +FD+AVDIR++SPT+G WV +E+SA N Q++IP AHGF+ L
Sbjct: 71 KT-QGKLVRVVAGSVFDVAVDIRKDSPTFGKWVGVELSAENHKQLWIPAQLAHGFLVLSP 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E +YK TD+Y + ++ +AW D ++ I WPL I P+++ KD L F
Sbjct: 130 TAEFLYKTTDYYHPQSEACLAWSDPTVGIEWPLPSGIQPNMNAKDAAG-HLWDAAPKF 186
>gi|83720588|ref|YP_442017.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia thailandensis
E264]
gi|167618956|ref|ZP_02387587.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia thailandensis
Bt4]
gi|257138200|ref|ZP_05586462.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia thailandensis
E264]
gi|83654413|gb|ABC38476.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia thailandensis
E264]
Length = 183
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ EL FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFSELVEPGVEFVQDNHSRS-ARGVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVD+RR+SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVDGEVFDVAVDVRRSSPNFGKWVGVRLSAENKRQLWVPAGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ E + + W D+ I I WP+ P V+ KD L++ +
Sbjct: 128 SADFLYKTTDYWYPEFERSILWSDEQIGIEWPI--DREPLVAAKDAAGKTLSEAE 180
>gi|585831|sp|P37763|RMLC_NEIGO RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|520898|emb|CAA83654.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae]
gi|1333795|emb|CAA79720.1| rfbC [Neisseria gonorrhoeae]
Length = 328
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++LK + F D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLKPQVFTDGRGFFMETFRDGWFKENIADRTFVQENHSNSSK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNRYQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y+ E + + W D +I I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYNPETEQVLIWNDPAIGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|238916051|ref|YP_002929568.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium eligens ATCC
27750]
gi|238871411|gb|ACR71121.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium eligens ATCC
27750]
Length = 203
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 106/196 (54%), Gaps = 21/196 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D+RG+F +TYS + ++E G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCVITPAVHGDNRGYFMETYSQRDMEEAGININFVQDNQSMSTK-GVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVD+R +S TYG W + ++ N Q IP GFAHGF+ L
Sbjct: 71 FPQTKLVRAIKGAVFDVAVDLRTDSETYGKWYGILLTEENKKQFLIPKGFAHGFLVLTDT 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK DFY + G+AW D +I I WP L D ++S+KD
Sbjct: 131 AEFCYKCDDFYHPNDEGGLAWNDPAIGIEWPELTGTYNGSASGEGYALSDGTKLNLSDKD 190
Query: 167 QNLPFLNQIDSPFEYD 182
Q L ++ F++D
Sbjct: 191 QLWDTL---ENTFKFD 203
>gi|229028989|ref|ZP_04185088.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1271]
gi|228732269|gb|EEL83152.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus AH1271]
Length = 168
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 81/170 (47%), Positives = 118/170 (69%), Gaps = 3/170 (1%)
Query: 10 KTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLV 69
+ R F D RG+F+++Y+ K+L+ LG+ FVQDN S+S + GTIRGLHFQ+ P AQ KL+
Sbjct: 2 EPRLFGDERGFFTESYNKKVLETLGVTYSFVQDNVSYSAEAGTIRGLHFQKNPKAQTKLI 61
Query: 70 RCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129
+ + G I+D+ VD+R++SPT+ W +SA+N Q+ +P GFAHGF TL +T V+YKV
Sbjct: 62 QVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVAHTIVMYKV 121
Query: 130 TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
++YS +HDSGV W DK + I WP+ P +S+KD+ LP L + + F
Sbjct: 122 DEYYSADHDSGVIWDDKELAIPWPV---TSPILSDKDRILPLLQEYEDSF 168
>gi|255654312|ref|ZP_05399721.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile
QCD-23m63]
gi|296452602|ref|ZP_06894296.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile NAP08]
gi|296880986|ref|ZP_06904932.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile NAP07]
gi|296258563|gb|EFH05464.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile NAP08]
gi|296428007|gb|EFH13908.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile NAP07]
Length = 185
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ F D RG+F ++Y+ + E GL F+QDN S S G +RG+HFQ
Sbjct: 10 KIEGLYIVEPSVFCDERGYFMESYNKRDFIEQGLDMCFIQDNES-SSRKGVLRGMHFQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR G +FD+AVD+R++S T+G W + +S N Q YIP GFAHGF+ L
Sbjct: 68 RYPQGKLVRVTEGEVFDVAVDLRKDSKTFGEWEGVILSDKNKKQFYIPEGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK T++Y E ++G W DK I I WPL +SEKD+ I
Sbjct: 128 KAVFNYKCTNYYYPEFENGFIWNDKQISIEWPLKGIEEIFLSEKDKKQKSFKDI 181
>gi|159154696|gb|ABW93681.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis]
gi|159154713|gb|ABW93697.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis]
Length = 185
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFKDGRGFFMETFRDGWFKENIADCSFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G WV +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWVGEILSAQNQCQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKAWAQAEK 178
>gi|120555539|ref|YP_959890.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Marinobacter aquaeolei VT8]
gi|120325388|gb|ABM19703.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Marinobacter aquaeolei VT8]
Length = 186
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ R F D RGWF ++++++ + G FVQDNHS S G +RG+HFQ
Sbjct: 8 LEGVLILEPRVFGDDRGWFYESFNAERFADAVGKPVAFVQDNHSRS-AKGVLRGIHFQTG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR G +FDIAVD+R++SPT+G W + +SA N Q+++P GF H F+
Sbjct: 67 RAAQGKLVRATFGEVFDIAVDLRKSSPTFGQWTGVLLSAENKRQLWVPAGFGHAFLVTSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV YKV ++S EH+ + W D ++ + WP + +SEKD++ P LN
Sbjct: 127 VAEVQYKVDAYWSAEHERSLRWDDPAVAVEWP--EVGEVQLSEKDRHAPDLN 176
>gi|126175090|ref|YP_001051239.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS155]
gi|125998295|gb|ABN62370.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS155]
Length = 187
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 108/173 (62%), Gaps = 6/173 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V+I++ + D RG+F +T++ + +EL G FVQDNHS S G +RGLH+Q
Sbjct: 13 KIPEVKIIEPAVYGDERGFFMETWNQQKFEELVTGKLTRFVQDNHSKS-KKGILRGLHYQ 71
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR ++G +FD+AVDIR++SP+YG WV +SA N Q+++P GFAHGF
Sbjct: 72 TENT-QGKLVRVVSGEVFDVAVDIRKDSPSYGYWVGEYLSAENKRQLWVPEGFAHGFYVT 130
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK T++Y+ + + W DKS+DI WP+ + P +S+KDQ L
Sbjct: 131 SEEAEFVYKCTNYYNPNSEVSILWSDKSLDIKWPIQSS--PELSKKDQQGVLL 181
>gi|261856083|ref|YP_003263366.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Halothiobacillus neapolitanus
c2]
gi|261836552|gb|ACX96319.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Halothiobacillus neapolitanus
c2]
Length = 184
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +L+ + F D RG+F +T++++ +E GL++ FVQDN S S G +RGLHFQ
Sbjct: 7 KLLGTLLLEPKVFGDERGFFMETWNAQRYREFGLEENFVQDNLSRSRR-GVLRGLHFQ-E 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLV + G +FD+AVDIRR SPT+G W +SA N LQ YIP GFAHGF
Sbjct: 65 PNPQGKLVSVLDGEVFDVAVDIRRGSPTFGQWEGYTLSAQNKLQFYIPPGFAHGFCVTSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
YK T+ Y ++ +AW D ++I WP+ P +S KD L S
Sbjct: 125 TALFAYKCTELYQPANEGAIAWDDPDLNIPWPID---QPELSAKDAKGIRLADYPS 177
>gi|291550905|emb|CBL27167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus torques L2-14]
Length = 202
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D+RG+F +TY+ +KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCVITPAVHGDARGYFMETYNENDMKEAGIDIKFVQDNQSMS-TKGVLRGLHFQ-KQ 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R S TYG W +E++ N Q IP GFAHGF+ L
Sbjct: 71 YPQCKLVRTVRGSVFDVAVDLRLGSETYGKWYGVELTEENKKQFLIPKGFAHGFLVLSEI 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK DFY + G+AW D + I WP L D ++SEKD
Sbjct: 131 AEFCYKCDDFYHPNDEGGMAWNDPEMGIEWPQVKGEYLGNALAEGYELEDGTKLNLSEKD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QKWLGLKD---TFKF 202
>gi|291521043|emb|CBK79336.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Coprococcus catus GD/7]
Length = 199
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 76/188 (40%), Positives = 100/188 (53%), Gaps = 18/188 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ D+RG+F +TYS + ++E G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCVIEPAVHGDARGYFMETYSQRDMEENGIHIQFVQDNQSMSTK-GVLRGLHFQ-KN 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR I G +FD+AVD+R S TYG W +E++ N Q IP GFAHGF+ L
Sbjct: 71 YPQTKLVRVIKGSVFDVAVDLRSGSETYGKWYGIELTEENKKQFLIPRGFAHGFLVLSDT 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK DFY + G+AW D I I WP L D ++S+KD
Sbjct: 131 AEFCYKCDDFYHPNDEGGMAWNDPEIGIEWPKVKGEYRGNADAEGYTLEDGTALNLSDKD 190
Query: 167 QNLPFLNQ 174
Q L
Sbjct: 191 QKWLGLKD 198
>gi|253563860|ref|ZP_04841317.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
gi|251947636|gb|EES87918.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
Length = 195
Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 114/186 (61%), Gaps = 8/186 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL------GLQDVFVQDNHSFSFDCGTIRGL 56
I V +++ + F+DSRG+F +++S + E G +FVQDN S S G +RGL
Sbjct: 8 IEGVVVIEPKVFKDSRGYFVESFSQREFDEKVAIPQYGKPILFVQDNESMSSY-GVMRGL 66
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQ PP+ Q+KLVRC+ G++ D+AVDIR+ SPTYG V++E++ +N Q+++P GFAHGF
Sbjct: 67 HFQLPPFTQSKLVRCVRGKVLDVAVDIRKGSPTYGHHVAVELTEDNHRQLFVPRGFAHGF 126
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
L YK +FY+ + D G++ +D+S+ I W + + +SEKD L
Sbjct: 127 AVLSETAVFQYKCDNFYAPQADGGISIKDESLGIDWCIPMDKV-ILSEKDTQHECLKDFT 185
Query: 177 SPFEYD 182
PF+ +
Sbjct: 186 PPFDIE 191
>gi|253578777|ref|ZP_04856048.1| sugar biosynthesis protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849720|gb|EES77679.1| sugar biosynthesis protein [Ruminococcus sp. 5_1_39BFAA]
Length = 202
Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 79/195 (40%), Positives = 105/195 (53%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ D+RG+F +TY+ K +KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCVIEPAVHGDARGYFMETYNEKDMKEAGIDIHFVQDNQSMS-TKGVLRGLHFQ-KQ 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R NS TYG W + +SA N Q IP GFAHGF+ L
Sbjct: 71 YPQCKLVRAVRGTVFDVAVDLRSNSETYGKWYGVTLSAENKKQFLIPEGFAHGFLVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S+KD
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPELKGEYKGSASAEGYTLKDGTALNLSDKD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QKWLGLKD---TFKF 202
>gi|297171712|gb|ADI22705.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[uncultured Rhodospirillales bacterium HF0500_23A22]
Length = 204
Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 1/178 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + + D RG F++T+ + ++ VQ+N S S T+RGLH+Q
Sbjct: 9 EIQGPVLFVPNRHRDPRGIFAETFRADEFRDAIGDVDLVQENQSISHPINTVRGLHYQAE 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KL+R + G + D+AVDIR +SPT+G + +E+SA N Q++IP GFAHGF TL
Sbjct: 69 PHAQGKLMRVVQGAVLDVAVDIRPHSPTFGRHIKIELSAENWYQLWIPPGFAHGFKTLRP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T VIYKV+D+YS HD G+AW D + I W L +S+KD+ P ++ F
Sbjct: 129 DTHVIYKVSDYYSPSHDHGMAWNDPDLGIDWEL-YGQQAVLSDKDRQQPRFCEVTPLF 185
>gi|302039315|ref|YP_003799637.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Nitrospira
defluvii]
gi|300607379|emb|CBK43712.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Nitrospira
defluvii]
Length = 185
Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + ++ F D+RG F + + G+ FVQDN S+S GT+RGLH+Q
Sbjct: 8 LKGLFQIEPDVFGDARGKFVEIFRESRYDAAGIDKPFVQDNFSWSVR-GTLRGLHYQ-LA 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G +FD+AVDIR+ SPT+G W +E+S +N Q+YIP GFAHGF L +
Sbjct: 66 RPQGKLVMVVKGTVFDVAVDIRQGSPTFGQWYGVELSDSNMRQLYIPPGFAHGFCVLSED 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+YK TD YS + G+ W D ++ I WP+ P +S KDQ L
Sbjct: 126 AGFLYKCTDVYSPPDERGILWNDPALAIAWPVK---TPLLSAKDQAYKCLAD 174
>gi|5545320|dbj|BAA82535.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase [Actinobacillus
actinomycetemcomitans]
Length = 179
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + +E FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLELQVFGDERGFFMETFRDEWFRENVADRTFVQENHSKS-IKGVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I+G +FD+AVD+R NS T+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVISGAVFDVAVDMRENSLTFGQWVGEVLSAENKHQLWVPEGFAHGFYVLTD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+Y+ + + W D+++ + WP+ P++S KD L +
Sbjct: 125 EAEFTYKCTDYYNPRAEHSLIWNDQTVGVEWPI--YSEPNLSAKDLGGKMLAEA 176
>gi|325203189|gb|ADY98642.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
M01-240355]
Length = 185
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++LK + F D RG+F +T+ K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLKPQVFTDGRGFFMETFRDGWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
TE+ YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 126 TELTYKCTDYYKPEAEHSLIWNDPTVGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|313667388|ref|YP_004047672.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria lactamica ST-640]
gi|313004850|emb|CBN86276.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria lactamica 020-06]
Length = 185
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++LK + F+D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLKPQVFKDGRGFFMETFRDGWFKENIADRTFVQENHSQSRK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR IAG +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRAIAGEVFDVAVDMREGSPTFGKWAGATLSAQNQYQLWIPEGFAHGFYVLGDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D +I I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYKPEAEQVLIWNDPAIGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|311744958|ref|ZP_07718743.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Algoriphagus sp. PR1]
gi|126577465|gb|EAZ81685.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Algoriphagus sp. PR1]
Length = 184
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V + + FED RG+F +++ S L++ G ++ ++QDN SFS GT+RGLHFQR
Sbjct: 9 ISGVLEIFPKVFEDQRGYFFESFRSDWLEQHGCKENWIQDNQSFS-QKGTVRGLHFQRGD 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVR I G++ D+ VD+R+ S T+G S + +Y+PTGFAHGF LE
Sbjct: 68 HAQAKLVRVIQGKVLDVVVDLRKGSETFGAHYSTILDTEQHNLLYVPTGFAHGFSVLED- 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+YK +++Y E + G+ W D + I W + + P +SEKD L +
Sbjct: 127 AIFVYKCSNYYHKESEGGILWNDSHLGIDWMVDN---PIISEKDAQWQKLQEFK 177
>gi|92118532|ref|YP_578261.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14]
gi|91801426|gb|ABE63801.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14]
Length = 207
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V++++T +F D+RG+F +T+ GL F+QDN S S GT+RGLHFQR
Sbjct: 29 LAIPDVKLIRTPRFSDTRGYFCETFQRADFAAQGLDCDFLQDNQSSSDRPGTVRGLHFQR 88
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVR + G I D+AVD+RR+S ++G V++E+S+ + Q+ +P GFAHGF TLE
Sbjct: 89 PPFAQTKLVRVLRGSILDVAVDLRRSSSSFGRHVAMELSSESNEQLLVPAGFAHGFCTLE 148
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T V YKV YS HDSGV W D + I WP+ + ++SEKD+ LP L + FE
Sbjct: 149 PDTVVFYKVDQVYSAAHDSGVNWADSRLGIEWPVA-SAEANLSEKDRGLPMLVDLAPVFE 207
>gi|323525016|ref|YP_004227169.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1001]
gi|323382018|gb|ADX54109.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1001]
Length = 183
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F +++++ E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNAVEFAEHVEAGVTFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +S N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVTLSVENHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ EH+ + W D I I WP+ P ++ KD L +
Sbjct: 128 SAQFLYKTTDYWFPEHERSIVWNDPEIGIEWPI--DFEPLLAAKDAAGKRLGDAE 180
>gi|227824676|ref|ZP_03989508.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidaminococcus sp. D21]
gi|226905175|gb|EEH91093.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidaminococcus sp. D21]
Length = 203
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 103/189 (54%), Gaps = 18/189 (9%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ + ++ + D RG+F +TY+ ++E G+ FVQDN S S G +RGLHFQ
Sbjct: 12 KIDGLCVITPTQHGDERGYFMETYNEHDMEEAGIHVKFVQDNQSMSTK-GVLRGLHFQ-K 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR I GR+FD+AVD+R S TYG W +E++ N Q IP GFAHGF+ L
Sbjct: 70 HFPQCKLVRVIRGRVFDVAVDLRAQSKTYGKWYGVELTEENKKQFLIPEGFAHGFLVLSD 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEK 165
E YKV DF+ + + G+AW D I I WP L D +SEK
Sbjct: 130 VAEFCYKVNDFWHPDDEGGLAWNDPEIGIDWPEVGGVYPGNASAEGYTLQDGTKLMLSEK 189
Query: 166 DQNLPFLNQ 174
DQ L++
Sbjct: 190 DQKWLGLDE 198
>gi|241203189|ref|YP_002974285.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857079|gb|ACS54746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 188
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V+ + +F D RG+FS+ + + FVQDN S S GT+RGLHFQ
Sbjct: 9 LEIGDVKKVTPARFGDPRGYFSEVFKDFWFRTNVADVSFVQDNESLSAQPGTVRGLHFQS 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRC+ G + D+AVDIR SPTYG WVS E+S NG Q+++P GFAHGF+TLE
Sbjct: 69 PPFAQGKLVRCLRGALLDVAVDIRHGSPTYGKWVSAELSPENGSQLWVPAGFAHGFVTLE 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T + YKVT YS EHD GV W D I I WP +D +S+KD P L+++ + F+
Sbjct: 129 PDTIISYKVTALYSAEHDCGVRWNDAEIGIEWPQMDGY--VLSDKDNKQPRLSELPTYFQ 186
Query: 181 Y 181
+
Sbjct: 187 F 187
>gi|227538986|ref|ZP_03969035.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227241189|gb|EEI91204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 182
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 104/175 (59%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ IL+ K+ DSRG+F ++++ K +L G FVQDN S+S G +RGLH Q
Sbjct: 7 KLQGCFILEPAKYGDSRGYFMESFNEKTFNDLTGTNTHFVQDNQSYS-TRGVLRGLHAQA 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQAKLVR + G + DIAVD+R S T+G +V++ +SA N LQ+++P GF HGF+ L
Sbjct: 66 GDHAQAKLVRVLEGEVIDIAVDVRAGSSTFGQYVAVRLSAENNLQLFVPRGFLHGFVVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK +FY+ E + GV DK + + W + + +S+KD+ P +I
Sbjct: 126 ETATFFYKCDNFYNKESECGVHPLDKDLAVDWQIPIEEM-VLSDKDKAAPGFKEI 179
>gi|194099848|ref|YP_002002985.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
NCCP11945]
gi|240017601|ref|ZP_04724141.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae FA6140]
gi|240081745|ref|ZP_04726288.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae FA19]
gi|240114021|ref|ZP_04728511.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae MS11]
gi|240116757|ref|ZP_04730819.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID18]
gi|240118978|ref|ZP_04733040.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID1]
gi|240124514|ref|ZP_04737470.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID332]
gi|240129194|ref|ZP_04741855.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
SK-93-1035]
gi|254494779|ref|ZP_05107950.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae 1291]
gi|260439482|ref|ZP_05793298.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae DGI2]
gi|268597843|ref|ZP_06132010.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria gonorrhoeae FA19]
gi|268600087|ref|ZP_06134254.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae MS11]
gi|268602428|ref|ZP_06136595.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID18]
gi|268604692|ref|ZP_06138859.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID1]
gi|268683148|ref|ZP_06150010.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID332]
gi|268687577|ref|ZP_06154439.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
SK-93-1035]
gi|291042716|ref|ZP_06568457.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae DGI2]
gi|293398258|ref|ZP_06642463.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria gonorrhoeae F62]
gi|193935138|gb|ACF30962.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
NCCP11945]
gi|226513819|gb|EEH63164.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae 1291]
gi|268551631|gb|EEZ46650.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria gonorrhoeae FA19]
gi|268584218|gb|EEZ48894.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae MS11]
gi|268586559|gb|EEZ51235.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID18]
gi|268588823|gb|EEZ53499.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID1]
gi|268623432|gb|EEZ55832.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae PID332]
gi|268627861|gb|EEZ60261.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
SK-93-1035]
gi|291013150|gb|EFE05116.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae DGI2]
gi|291611521|gb|EFF40591.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria gonorrhoeae F62]
Length = 185
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++LK + F D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLKPQVFTDGRGFFMETFRDGWFKENIADRTFVQENHSNSSK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNRYQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y+ E + + W D +I I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYNPETEQVLIWNDPAIGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|50120380|ref|YP_049547.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Pectobacterium atrosepticum
SCRI1043]
gi|49610906|emb|CAG74351.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Pectobacterium atrosepticum
SCRI1043]
Length = 178
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+I++ + F D+RG+F +T+ + +E L + FVQDNHS S G +RGLHFQ
Sbjct: 10 GAKIIQPKVFGDARGFFLETFEKRRYQEMLDIDVDFVQDNHSRSSK-GVLRGLHFQ-KTN 67
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
Q KLVR + G +FD+AVDIR++SPTYG W +S N Q ++P G AHGF+ L
Sbjct: 68 PQGKLVRVVRGEVFDVAVDIRQDSPTYGKWYGALLSEENKTQFWLPPGLAHGFVVLSDIA 127
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y + + W D + I WP+ P +SEKD+ +
Sbjct: 128 DFEYKCTDYYDPSDEGCLLWNDPDLGIEWPIS---TPQLSEKDKVGKLFKDL 176
>gi|167580855|ref|ZP_02373729.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia thailandensis
TXDOH]
Length = 183
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ EL FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFSELVEPGVEFVQDNHSRS-ARGVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVD+RR+SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 68 EHAQGKLVRVVDGEVFDVAVDVRRSSPNFGKWVGVRLSAENKRQLWVPAGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ E + + W D+ I I WP+ P V+ KD L++ +
Sbjct: 128 SADFLYKTTDYWYPEFERSILWSDEQIGIEWPI--DREPLVAAKDAAGKTLSEAE 180
>gi|293407678|gb|ADE44332.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia
pseudomallei]
gi|312100406|gb|ADQ27802.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei]
gi|312100442|gb|ADQ27836.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei]
gi|312100472|gb|ADQ27858.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei]
Length = 183
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E F+QDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFAEQVEAGVEFIQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIRR+SP + WV + +SA+N Q+++P GFAHGF+ L
Sbjct: 68 RHAQGKLVRVVEGEVFDVAVDIRRSSPNFDKWVGVVLSADNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ E + + W D +I I WP+ P ++ KD LN +
Sbjct: 128 SAQFLYKTTDYWYPEFERSIVWNDPTIGIEWPI--DFEPLLAAKDAAGAKLNDAE 180
>gi|118467223|ref|YP_883542.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium avium 104]
gi|118168510|gb|ABK69407.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium avium 104]
Length = 201
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + D+RG F + + K + G + Q N S S G +RGLHF
Sbjct: 6 LKIPGAWEITPTVHGDARGHFFEWLTDKGFRSFAGHRLDVRQANCSVSAA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G +FD+ VDIR SPT+G W S+ + IYI G HGF+ L
Sbjct: 65 QVPPSQAKYVTCVRGSVFDVVVDIRVGSPTFGQWDSVLLDDAEHRTIYISEGLGHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + D ++ I WPL+ P++SE+D P L ++
Sbjct: 125 QDNSTVMYLCSAEYNPGREHTICATDPALGIDWPLVAGAAPTLSERDAAAPSLEEV 180
>gi|313683244|ref|YP_004060982.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Sulfuricurvum kujiense DSM
16994]
gi|313156104|gb|ADR34782.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfuricurvum kujiense DSM
16994]
Length = 197
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 4/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V ++ + D RG+F +T+ + L+ LG F QDN S S G +RGLH+Q
Sbjct: 7 EIPDVIVIDPKVHGDERGYFVETFRADKLEAFLGFTIPFCQDNESKS-SYGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ+KLVR I G + D+AVDIR+ SPT+G VS+ +S N Q++IP GFAHGF+ L
Sbjct: 66 PPHAQSKLVRVIDGEVLDVAVDIRKGSPTFGRHVSVRLSGENKRQLFIPRGFAHGFVVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
YKV ++YS E D G+A+ D SI I W + + +S KD P LN D F+
Sbjct: 126 ETCTFAYKVDNYYSPECDRGIAFDDPSIGIDWHV-NHSDLQLSPKDTEQPLLNAAD-LFD 183
Query: 181 Y 181
+
Sbjct: 184 F 184
>gi|301162535|emb|CBW22081.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis 638R]
Length = 195
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 8/186 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL------GLQDVFVQDNHSFSFDCGTIRGL 56
I V +++ + F+DSRG+F +++S + E G +FVQDN S S G +RGL
Sbjct: 8 IEGVVVIEPKVFKDSRGYFVESFSQREFDEKVAIPQYGKPILFVQDNESMSSY-GVMRGL 66
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQ PP+ Q+KLVRC+ G++ D+AVDIR+ SPTYG V++E++ +N Q ++P GFAHGF
Sbjct: 67 HFQLPPFTQSKLVRCVRGKVLDVAVDIRKGSPTYGHHVAVELTEDNHRQFFVPRGFAHGF 126
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
L YK +FY+ + D G++ +D+S+ I W + + +SEKD L
Sbjct: 127 AVLSETAVFQYKCDNFYAPQADGGISIKDESLGIDWCIPMDKV-ILSEKDTQHECLKDFT 185
Query: 177 SPFEYD 182
PF+ +
Sbjct: 186 PPFDIE 191
>gi|145219284|ref|YP_001129993.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prosthecochloris vibrioformis
DSM 265]
gi|145205448|gb|ABP36491.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium phaeovibrioides
DSM 265]
Length = 194
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V + D RG+F +++ L++E + FVQDN S S G +RGLHFQRPP
Sbjct: 8 IPDVLEFEPDVLGDERGYFFESFRRDLIEEHIGRVDFVQDNESKSSR-GVLRGLHFQRPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR + GR+ D+AVDIRR SP YG +V+ E+ ++++P GFAHGF+ L
Sbjct: 67 HTQSKLVRVVRGRVLDVAVDIRRGSPWYGRYVACELDGERKNELWVPKGFAHGFVVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +Y + G+ W D ++ I W L +T + VS KD LP + I+ F Y
Sbjct: 127 AVFSYKCDSYYQPSSEGGLLWNDPALGIDWRLEETDI-RVSGKDGGLPGFSGIED-FPY 183
>gi|83310573|ref|YP_420837.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Magnetospirillum magneticum AMB-1]
gi|82945414|dbj|BAE50278.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Magnetospirillum magneticum AMB-1]
Length = 184
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 79/172 (45%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +L+ +F DSRGWF +++S + +E GL ++DN S SF GT+RGLHFQRP
Sbjct: 7 DLPGVLLLRPARFSDSRGWFMESWSHQAFREAGLDTEVIKDNVSLSFKTGTVRGLHFQRP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKL+ +GR+ D+AVD+R S TYG +S+E+SA G ++IP GFAHGF TLE
Sbjct: 67 PMAQAKLISVYSGRVLDVAVDLRPGSATYGRHLSVELSAAEGTMLFIPKGFAHGFCTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
NT V YKV YS EH+ + W+D + I WP+ + +S KD
Sbjct: 127 NTLVGYKVDAPYSPEHEGAIHWRDPDLGIVWPVSED-QAELSPKDLAAGPFA 177
>gi|7592818|dbj|BAA94405.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Actinobacillus
actinomycetemcomitans]
Length = 180
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++L+ + F D RG+F +T+ + ++ FVQ+NHS S G +RGLH+Q
Sbjct: 7 KIPDVKLLEPQVFGDERGFFMETFRDEWFRKNVADRTFVQENHSKS-IKGVLRGLHYQTE 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR ++G +FD+AVD+R NSPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 66 NT-QGKLVRVVSGAVFDVAVDMRENSPTFGQWVGEVLSAENKHQLWVPEGFAHGFYVLTG 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E YK TD+Y+ + + + W D+++ I WPL PS+S KD
Sbjct: 125 EAEFTYKCTDYYNPKAEYSLIWNDETVGIEWPL--YGEPSLSAKDLAGREFK 174
>gi|120437611|ref|YP_863297.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gramella forsetii KT0803]
gi|117579761|emb|CAL68230.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gramella forsetii KT0803]
Length = 181
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ ++K R FED RG F +TY K EL G+ + FVQDN S S G +RG+H+Q+
Sbjct: 8 LKDCFLIKPRIFEDHRGIFLETYQRKRFAELSGIDEEFVQDNQSVS-QFGVLRGMHYQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ K+VR I G++ D+ VD+R +SPT+ S + N Q+Y+PTGF HGF+TL
Sbjct: 67 EFAQTKIVRVIYGKVLDVVVDLRPDSPTFKKTFSTILDDQNLNQLYVPTGFGHGFLTLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ YK +Y+ ++G+ + D ++I W + + +SEKD+ LP Q
Sbjct: 127 KSVFAYKCDQYYTPGSEAGIIFNDPDLNINWNFPEREM-ILSEKDRVLPTFKQ 178
>gi|116327946|ref|YP_797666.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330828|ref|YP_800546.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|4234801|gb|AAD12969.1| RmlC [Leptospira borgpetersenii]
gi|116120690|gb|ABJ78733.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124517|gb|ABJ75788.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 186
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I ++K + F D RG+F +T+ + L + + F QDNHS S G +RG+H Q P
Sbjct: 7 SIEGPVLIKPKVFGDERGFFFETFKTSLFESESIPTHFSQDNHSRSSR-GVLRGMHLQVP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY Q KLVR + G++ D+ VD+R SP YG W S+E+S N ++P GFAHGF+TLE
Sbjct: 66 PYEQGKLVRVVRGKVIDVVVDVRIGSPNYGKWFSVELSEENKNIFWVPPGFAHGFLTLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFE 180
T+ +YKVT YS +++ G+ W D ++ I W L VS++DQ PFL SPF
Sbjct: 126 KTDFLYKVTKEYSPQNEVGIRWDDPTLGIPWKTWLSDSEFIVSQRDQETPFLASFKSPFV 185
Query: 181 Y 181
Y
Sbjct: 186 Y 186
>gi|254805864|ref|YP_003084085.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
alpha14]
gi|254669406|emb|CBA08595.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
alpha14]
gi|254671743|emb|CBA09562.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
alpha153]
Length = 185
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ILK + F D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKILKPQVFTDGRGFFMETFRDGWFKENIADRTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKAWAQAEK 178
>gi|268593347|ref|ZP_06127568.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Providencia rettgeri DSM
1131]
gi|291311044|gb|EFE51497.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Providencia rettgeri DSM
1131]
Length = 182
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
NI V+I++ + F D RG+F + + + +E FVQDN S S G +RGLH+Q
Sbjct: 7 NIPEVKIIEPQVFGDDRGFFLEIWQQEKFEEKITNKPTDFVQDNISKS-RKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLV I G +FD+AVDIR NSPT+G WV + +S N Q+++P GFAHGF
Sbjct: 66 TKNT-QGKLVSVILGEVFDVAVDIRANSPTFGQWVGVYLSDKNKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK T++Y + + W D ++ I WPL T P +SEKD+ NQ
Sbjct: 125 SDEAVFHYKCTNYYDPLSEQTIMWNDSNLSIEWPLC-TEHPVLSEKDKKGILFNQA 179
>gi|189502419|ref|YP_001958136.1| hypothetical protein Aasi_1062 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497860|gb|ACE06407.1| hypothetical protein Aasi_1062 [Candidatus Amoebophilus asiaticus
5a2]
Length = 186
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ I+ D RG+F + Y + L +LG+ + FVQ+N SFS GTIRGLH+Q PYA
Sbjct: 10 GLTIIGPELKTDQRGYFMECYHQEKLTQLGIHNQFVQENQSFSKK-GTIRGLHYQLNPYA 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
QAKL+R I G I+DI VD+R+ S T+G W + +SA N Q+ IP G+AHGF +
Sbjct: 69 QAKLIRVIDGAIWDIIVDLRQGSTTFGQWEGIMLSAENNKQLLIPRGYAHGFAVMSQEAT 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGL 184
+IYK +FY E ++G+ W D + I W + P +S +DQ LP L + F+Y L
Sbjct: 129 IIYKCDNFYHPEAEAGIHWLDPELAIDWKI--NAPPLLSARDQQLPCLEKAIINFDYQSL 186
>gi|16129978|ref|NP_416542.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|89108858|ref|AP_002638.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli str. K-12
substr. W3110]
gi|170081668|ref|YP_001730988.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|238901228|ref|YP_002927024.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli BW2952]
gi|585830|sp|P37745|RMLC_ECOLI RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|508240|gb|AAB88401.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
gi|510251|gb|AAC31630.1| dTDP-6-deoxy-L-xylo-4-hexulose 4-reductase [Escherichia coli str.
K12 substr. W3110]
gi|1736728|dbj|BAA15880.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli str. K12
substr. W3110]
gi|1788350|gb|AAC75099.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|169889503|gb|ACB03210.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|238861013|gb|ACR63011.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli BW2952]
gi|260448862|gb|ACX39284.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli DH1]
gi|281179137|dbj|BAI55467.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli SE15]
gi|315136672|dbj|BAJ43831.1| dTDP-4-deoxyrhamnose-3,5-epimerase [Escherichia coli DH1]
Length = 185
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V IL+ R F D RG+F ++++ + LG FVQDNHS S +RGLHFQR
Sbjct: 7 EIEDVLILEPRVFGDDRGFFYESFNQSAFEHILGYPVSFVQDNHSRS-SKNVLRGLHFQR 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
YAQ KLVRC G +FD+AVDIR NS ++G WV + +SA+N Q++IP GFAHGF+ L
Sbjct: 66 GEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK T++Y E D G+ W D+ I I WP T +S KD+ L L+++
Sbjct: 126 DIAEFQYKTTNYYHPESDCGICWNDERIAIDWP--QTSGLILSPKDERLFTLDEL 178
>gi|168481430|gb|ACA24909.1| RmlC [Shigella dysenteriae]
Length = 182
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I++ + F D RG+F ++++ KL ++ FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPEVLIIEPQIFSDERGYFFESFNQKLFDDVVNRHVEFVQDNHSRSSK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQAKLVRCI G +FD+AVDIR SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 PPFAQAKLVRCIVGEVFDVAVDIRTMSPTFGHWVGVRLSAENKRQLWIPEGFAHGFLTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
N E YK T+FY E ++G+ W D I+I WP D + +S KD LP L
Sbjct: 126 ENAEFAYKTTNFYCKEAEAGIIWNDPQINIKWP-EDNMEFLLSTKDVILPCLTDA 179
>gi|332529613|ref|ZP_08405569.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Hylemonella gracilis ATCC
19624]
gi|332040963|gb|EGI77333.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Hylemonella gracilis ATCC
19624]
Length = 182
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + F DSRG+F ++++ K+ E+ G FVQD HS S G +RGLH+Q
Sbjct: 8 LPGVLILEPQVFGDSRGFFFESFNQKVFVEITGANFNFVQDGHSKSGK-GVLRGLHYQIQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q K+VR G +FD+AVDIR++S +G WV +E+S N Q++IP GFAHGF
Sbjct: 67 QT-QGKIVRVTRGSVFDVAVDIRKSSANFGKWVGVELSEENRRQLWIPPGFAHGFAVTSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ +V+YK+T+ Y+ +H+ + W D +I I WP+ + +S KDQ L
Sbjct: 126 SADVLYKMTENYAPQHERCILWNDPAIGIRWPVQ-GLEVQLSAKDQQGVPLA 176
>gi|37521774|ref|NP_925151.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gloeobacter violaceus PCC
7421]
gi|35212772|dbj|BAC90146.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gloeobacter violaceus PCC
7421]
Length = 182
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ + ED RG+F++T+ ++ + GL F Q N S++ GT+RGLH+Q
Sbjct: 7 KLAGAWIIELERREDERGFFARTFCAREFEAQGLAGTFAQSNLSYNHRAGTLRGLHYQVA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P + KLVRC G I+D+ VD+R S TY + +E+S +N +Y+P FAHG+ L
Sbjct: 67 PALETKLVRCTRGAIYDVIVDLRPGSRTYLQHIGVELSEDNRWALYVPGLFAHGYQALTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV+Y+V +FY+ ++ G+ + D ++ I WPL + +S KD P L
Sbjct: 127 GAEVLYQVGEFYTPGYERGLRYDDPALAIDWPLP---VSVLSTKDNGWPLLA 175
>gi|239997866|ref|ZP_04717790.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae 35/02]
gi|240015153|ref|ZP_04722066.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae DGI18]
gi|240122224|ref|ZP_04735186.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
PID24-1]
gi|240124613|ref|ZP_04737499.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
SK-92-679]
gi|268593712|ref|ZP_06127879.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria gonorrhoeae 35/02]
gi|268683180|ref|ZP_06150042.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
SK-92-679]
gi|268547101|gb|EEZ42519.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria gonorrhoeae 35/02]
gi|268623464|gb|EEZ55864.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
SK-92-679]
gi|317165316|gb|ADV08857.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 185
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++LK + F D RG+F +T+ KE FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKLLKPQVFTDGRGFFMETFRDGWFKENIADRTFVQENHSNSSK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 67 T-QGKLVRIVVGEVFDVAVDMREGSPTFGKWAGATLSAQNRYQLWIPEGFAHGFCVLGDA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y+ E + + W D +I I WPL P +S KD Q +
Sbjct: 126 AEVVYKCTDYYNPETEQVLIWNDPAIGIGWPL--QTAPLLSPKDLAGKTWAQAEK 178
>gi|206561477|ref|YP_002232242.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase [Burkholderia
cenocepacia J2315]
gi|198037519|emb|CAR53456.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase [Burkholderia
cenocepacia J2315]
Length = 183
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ R F D+RG+F ++++ K E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPRVFGDARGFFYESFNGKEFAERVEPGVEFVQDNHSRSSK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR+NSP +G WV + +S +N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRKNSPNFGKWVGVVLSDDNHRQLWVPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ EH+ + W D I I WP+ P ++ KD L++ D
Sbjct: 128 AAQFLYKTTDYWFPEHERSIVWNDPEIGIEWPI--DFEPLLAVKDAAGKQLSEAD 180
>gi|148241181|ref|YP_001226338.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. RCC307]
gi|147849491|emb|CAK26985.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. RCC307]
Length = 193
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 102/173 (58%), Gaps = 3/173 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ R F D RGWF ++++ + + G F QDNHS S G +RGLH+Q PP
Sbjct: 15 EGPLLITPRVFGDERGWFFESWNQRRFDEAAGEAVTFAQDNHSRS-AQGVLRGLHYQLPP 73
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLVR G IFD+ VD+R++SPT G WV ++SA N Q+++P GFAHGF+TL
Sbjct: 74 EPQAKLVRVTVGEIFDVVVDLRQSSPTCGQWVGAQLSAENHQQLWVPEGFAHGFLTLSAV 133
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV YK F++ + + W D ++ I WPL + + VSEKD P L Q
Sbjct: 134 AEVQYKTRGFWNKGCERAIRWDDPALAIAWPL-EGLTVQVSEKDGLAPSLAQA 185
>gi|294506497|ref|YP_003570555.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Salinibacter ruber
M8]
gi|294342825|emb|CBH23603.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Salinibacter ruber
M8]
Length = 186
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ VR+++ + D RG F++ ++ + GL FVQDN S S + G +RGLHFQ P
Sbjct: 7 SLPGVRLIEPDVYLDDRGSFAEMWNVRDYGHHGLDVTFVQDNLSRSRE-GVLRGLHFQNP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KL+ + G ++D+ VD+R S T+G W +SA +G Q+Y P G+AHGF+
Sbjct: 66 R-AQGKLISVLEGAVYDVVVDVRTGSDTFGDWEGQVLSAESGRQLYAPEGYAHGFVATSG 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK TDFY E D V W D ++ I WP D P +S KD P L ++
Sbjct: 125 EVLFHYKCTDFYHPEADRTVRWDDPALAIDWPTED---PILSAKDAGAPALEELP 176
>gi|332667357|ref|YP_004450145.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Haliscomenobacter hydrossis
DSM 1100]
gi|332336171|gb|AEE53272.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Haliscomenobacter hydrossis
DSM 1100]
Length = 183
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/172 (41%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++ F D RG F++T+ + +G FVQ NHS + GT+RG+HFQ+ P
Sbjct: 8 LRGAYLIDLEPFTDERGMFARTFCKQEFAAIGHNKEFVQFNHSQNQRQGTLRGMHFQKAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+++ KL+RCI GR+FD+ VD+R SPT+ + +E+S +N IY+P GFAHGF TLE +
Sbjct: 68 FSEIKLIRCIRGRVFDVIVDLRAQSPTFLQYYGVELSESNLRMIYVPEGFAHGFQTLEDH 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
TE+IY T FY+ + G+ ++D I I WP +SEKDQN PF+
Sbjct: 128 TELIYHHTAFYTPGQERGIHYKDPRIKIEWP---AATSIISEKDQNYPFIAD 176
>gi|302560674|ref|ZP_07313016.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces griseoflavus
Tu4000]
gi|302478292|gb|EFL41385.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces griseoflavus
Tu4000]
Length = 197
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + + + F D RG F + + + + + G Q N S S GT+RG+HF
Sbjct: 4 LSLPGAWVHEPKIFPDGRGSFHEWFKAPVFTEAAGHPLTLAQANMSVSSR-GTLRGIHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V+C+ G + D+ VDIR SP +G W ++ + + +Y+ G HGFM L
Sbjct: 63 DVPPGQAKYVKCVRGAVLDVIVDIRTGSPAFGQWEAVRLDDRDHHAVYLSEGLGHGFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V+Y ++ Y+ E + G+ D ++ I WP + + P +S KD+ P L Q
Sbjct: 123 TDDATVVYLCSEGYAPEREHGIHPLDPALGIEWP--EGLTPLLSAKDEQAPTLAQA 176
>gi|257126937|ref|YP_003165051.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptotrichia buccalis
C-1013-b]
gi|257050876|gb|ACV40060.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leptotrichia buccalis
C-1013-b]
Length = 190
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 6/182 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + F D RG+F +TY+ K +ELGL FVQDNHS S G +RGLHFQ
Sbjct: 11 IKDLVIIEPKVFGDERGFFMETYNQKSFEELGLTMSFVQDNHSKS-KKGVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G ++D+AVD+R+ S T+G W ++++SA N L Y+P GFAHGF+TLE
Sbjct: 69 HTQGKLVRVIKGSVYDVAVDLRKGSDTFGKWYAIKLSAENKLMFYVPEGFAHGFLTLEDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDSP 178
TE +Y+ TD Y+ E+DSG+ W D++I+I W + ++SEKD+ +
Sbjct: 129 TEFVYRCTDLYAPEYDSGLLWNDETINIDWKFEEFGINHDELTISEKDKAQQKFDLNKDY 188
Query: 179 FE 180
FE
Sbjct: 189 FE 190
>gi|266620081|ref|ZP_06113016.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium hathewayi DSM
13479]
gi|288868310|gb|EFD00609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium hathewayi DSM
13479]
Length = 221
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI + +++ + F D RG+ + Y + +E GL VFVQDN S S GT+RG+HFQ
Sbjct: 11 NIEGLYLVEPQVFADERGYNFEAYHAGSFREAGLDMVFVQDNLSMSAK-GTLRGMHFQ-K 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLV + G +FD VDIR S TYG W +SA +Y+P GFAHGF+ L
Sbjct: 69 NYQQGKLVCVVCGEVFDAVVDIREGSRTYGQWFGTVLSAEKKNMLYVPEGFAHGFLVLSD 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK+++ Y E +SG+ W D+++ I WP+ + + SE+D P +
Sbjct: 129 TAVFSYKLSEHYHPEDESGIPWNDETVGIRWPIPEDMTVLTSERDSCHPAFGE 181
>gi|21227268|ref|NP_633190.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina mazei Go1]
gi|20905616|gb|AAM30862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina mazei Go1]
Length = 183
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + IL+ + + D RG+F ++Y+ K L+ L G + F+QDN S S G IRGLH+Q
Sbjct: 8 IKDLLILEAKVYADGRGYFFESYNKKTLESLTGKEYNFIQDNESRS-SYGVIRGLHYQLA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+QAKLVR + GR++D+AVD+R++SPT+G W +E+S N Q IP GFAHGF L
Sbjct: 67 PYSQAKLVRVLEGRVYDVAVDLRKDSPTFGKWEGVELSGENKKQFLIPKGFAHGFSVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK ++Y E ++G+ + D +++I W + + +SEKD+ LP L F
Sbjct: 127 TAVFAYKCDEYYHPEAEAGIIYNDPALNIDWKIPERDA-KLSEKDKLLPELKNARMNF 183
>gi|146312295|ref|YP_001177369.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterobacter sp. 638]
gi|145319171|gb|ABP61318.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterobacter sp. 638]
Length = 186
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 5/170 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I++ + F+D RG+F + Y + L + FVQDN S S +RGLHFQ+
Sbjct: 8 LKDAVIIEPQVFKDERGYFFEVYKKNRYQSLDINAEFVQDNRSKSTK-NVLRGLHFQKNK 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KL+ G +FD+AVD+R +S T+G + S+ +S N Q YIP GFAHGF L
Sbjct: 67 -PQGKLISVSEGVVFDVAVDLRPDSATFGQYHSVILSDENFQQFYIPPGFAHGFCVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
YK TD+Y + G+ W D ++I WP+ I P +S KD LP
Sbjct: 126 ATFQYKCTDYYDPSDEGGIIWNDPVLNIDWPI---IEPIISAKDCALPDF 172
>gi|332519462|ref|ZP_08395929.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lacinutrix algicola 5H-3-7-4]
gi|332045310|gb|EGI81503.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lacinutrix algicola 5H-3-7-4]
Length = 182
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 3/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ IL+ F DSRG+F +++++K E + VF+QDN SFS G +RGLH+Q
Sbjct: 7 KLKDCFILEPNVFNDSRGYFFESFNAKTFIEHVNSKTVFLQDNESFS-TKGVLRGLHYQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
YAQAKLVR + G + D+AVD+R++S T+G V++E+SA N Q+++P GFAHGF+ L
Sbjct: 66 GEYAQAKLVRVVQGSVLDVAVDLRQDSKTFGQHVAVELSAENKKQLFVPRGFAHGFIVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK ++Y+ ++G+ + DK + I W L + VS+KD LP L
Sbjct: 126 DTAIFSYKCDNYYNKASEAGIIYNDKDLKIDWKL-NESDFLVSDKDLVLPTLKNAK 180
>gi|63033905|gb|AAY28256.1| RmlC [Escherichia coli]
Length = 188
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ + +++ +ED RG+F ++Y+ K E +G FVQDNHS S G +RGLHFQ+
Sbjct: 7 KLDGLLVIEPTVYEDERGFFYESYNEKKFMETIGASIKFVQDNHSKS-SKGVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PY QAKLVRCI G ++D+AVDIR++SPT+G W + +S N Q++IP GFAHGF+TL
Sbjct: 66 NPYEQAKLVRCIRGEVYDVAVDIRKDSPTFGQWFGVNLSDENKKQLWIPEGFAHGFITLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK T++Y+ + + W DK ++I WPL + VS KDQ
Sbjct: 126 DVAEFVYKTTNYYAPASEYCLKWDDKDLNIQWPLKN--ALIVSSKDQKGKAFADF 178
>gi|187880625|gb|ACD37131.1| RmlC [Shigella boydii]
Length = 176
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V+I++ + D+RG+F + Y + + L ++ FVQDN+S S +RGLHFQ+
Sbjct: 8 LDGVKIIEPVVYGDNRGFFLEVYQKQRYQNLLNIEFDFVQDNYSRSSK-NVLRGLHFQKT 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIR+ SP YG W+ + +S N Q ++P GFAHGF+ L
Sbjct: 67 K-PQGKLVRVVRGEVFDVAVDIRKESPNYGQWIGVLLSEMNKKQFWVPPGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T++Y E + + W D ++I WPL + P +S+KD L ++
Sbjct: 126 MADFEYKCTEYYDPEDECCLLWNDPELNIQWPLSN---PILSDKDMKGCLLKEL 176
>gi|288802553|ref|ZP_06407992.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella melaninogenica
D18]
gi|288335081|gb|EFC73517.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella melaninogenica
D18]
Length = 184
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V I++ + F D RG+F +++ K +G F+QDN S S G +RGLH+Q
Sbjct: 7 EIDGVWIIEPKVFNDDRGYFFESFKQSEFDKNVGYHVDFIQDNESKS-SYGVLRGLHYQE 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQAKLVR I G++ D+AVD+R++SPT+G +V +E+S N Q ++P GFAHGF+ L
Sbjct: 66 GDTAQAKLVRVIKGKVVDVAVDLRKSSPTFGKYVMVELSDKNKRQFFVPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN-LPFLNQID 176
YKV + YS + ++ + W D+++ + WP+ D +S+KD N L
Sbjct: 126 DEAIFTYKVDNVYSPQTEASLRWNDETVAVKWPI-DAKDVILSDKDLNKGLSLKDAK 181
>gi|86137091|ref|ZP_01055669.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseobacter sp. MED193]
gi|85826415|gb|EAQ46612.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseobacter sp. MED193]
Length = 182
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I + K D+RG F++ + ++ E GL + Q N S S GT+RGLHFQR
Sbjct: 6 LPIAGAYHIVPEKLGDNRGAFARLFCNERFAEQGLNIEWAQMNLSRSAQKGTLRGLHFQR 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+++ KLVR + G++FD+ VD+R S TYG + + ++ +YIP G AHGF TL
Sbjct: 66 PPFSEVKLVRAVTGKVFDVLVDLREGSKTYGAHCGVILDSDQLEALYIPQGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E+ Y + Y+ +H+ G+ + D ++ I WPL T S +D+ LP + I
Sbjct: 126 DDVELHYMHSAPYAPDHEGGIRFDDPTLSIRWPLGVTET---SPRDRALPLFSDIK 178
>gi|323340991|ref|ZP_08081240.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Lactobacillus
ruminis ATCC 25644]
gi|323091653|gb|EFZ34276.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Lactobacillus
ruminis ATCC 25644]
Length = 202
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 100/195 (51%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +TY+ +KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCVITPAVHGDDRGYFMETYNENDMKEAGIDVKFVQDNQSMS-TKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD VD+R++S TYG W + +SA N Q IP GFAHGF+ L
Sbjct: 71 FPQCKLVRAVRGTVFDAVVDLRQDSKTYGKWYGVTLSAENKKQFLIPEGFAHGFLVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S+KD
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPELVGEYKGTPSAEGYTLEDGTKITLSDKD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q F++
Sbjct: 191 QKWLGFKD---TFKF 202
>gi|148360590|ref|YP_001251797.1| dTDP-6-deoxy-D-glucose-3,5-epimerase RmlC [Legionella pneumophila
str. Corby]
gi|296106344|ref|YP_003618044.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella pneumophila
2300/99 Alcoy]
gi|148282363|gb|ABQ56451.1| dTDP-6-deoxy-D-glucose-3,5-epimerase RmlC [Legionella pneumophila
str. Corby]
gi|295648245|gb|ADG24092.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella pneumophila
2300/99 Alcoy]
Length = 187
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ ++I++ + + D RG+F +++ +K +EL G+ D FVQDN S S G +RGLH+Q
Sbjct: 8 IDELKIIEPKIYGDERGFFYESFQAKRYEELLGITDRFVQDNFSRSQK-GVLRGLHYQ-S 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV +AG +FD+AVDIR SPT+G WV + +S N Q +IP GFAHGF L
Sbjct: 66 QQTQGKLVSVLAGEVFDVAVDIRLGSPTFGQWVGVILSGENKRQFWIPKGFAHGFYVLSA 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN--QIDSPF 179
+ YK TD+Y E + + + D + I WPL +S KD L+ +
Sbjct: 126 MADFAYKCTDYYYPESEFSIHYLDPQLAIDWPL--GEQVQLSPKDAAAKPLSLIDAELLP 183
Query: 180 EYD 182
Y
Sbjct: 184 RYQ 186
>gi|193214636|ref|YP_001995835.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroherpeton thalassium
ATCC 35110]
gi|193088113|gb|ACF13388.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroherpeton thalassium
ATCC 35110]
Length = 183
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I++ + F D RG+F ++++ + L +F QDN S S G +RGLH+Q P
Sbjct: 8 LPGVLIVEPKIFGDERGYFYESFNLAAFSKHNLPTLFWQDNISRSVK-GVLRGLHYQLNP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YAQ KLVR G +FD+AVD+R+NSPT+G W L +SA N Q++IP GFAHGF
Sbjct: 67 YAQGKLVRVSEGEVFDVAVDLRKNSPTFGKWFGLTLSAENKKQLWIPPGFAHGFCVTSDF 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK T Y+ + + W D + I WP +SEKD+N ++ + F
Sbjct: 127 AVFNYKATTKYAPSSERAILWNDAELGIEWP-KLDCDWILSEKDKNGTPFSKAEMNF 182
>gi|255009344|ref|ZP_05281470.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis 3_1_12]
gi|313147099|ref|ZP_07809292.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis 3_1_12]
gi|313135866|gb|EFR53226.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis 3_1_12]
Length = 182
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ + F D RG+F + + + Q F+QDN S S GT+RGLH+Q+
Sbjct: 7 EIDGVWIIEPKVFSDPRGYFMEAFKQQEFDATIGQINFIQDNESKSSF-GTLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y QAKLVR I G + D+AVD+R++SPT+G +S+ +S +N Q++IP GFAHGF+
Sbjct: 66 DYCQAKLVRVIKGEVLDVAVDLRKSSPTFGKHISVLLSDDNKRQLFIPRGFAHGFLVKSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ + ++ + + D ++ I WP+ D+ L +SEKD+ +
Sbjct: 126 EAVFTYKVDNIYAPQAEASIIYNDPALGIDWPIADSQL-VMSEKDRQAGNFRAAE 179
>gi|209696413|ref|YP_002264344.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Aliivibrio
salmonicida LFI1238]
gi|208010367|emb|CAQ80705.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Aliivibrio
salmonicida LFI1238]
Length = 184
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ F D RG+F +T++ +EL G FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVKIIEPSVFGDERGFFMETWNQAKFEELVTGKPTRFVQDNHSKS-KKGILRGLHYQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIR+ SPT+G WV +SA N Q+++P GFAHGF
Sbjct: 67 ENT-QGKLVRVVSGEVFDVAVDIRKGSPTFGQWVGEYLSAENKRQLWVPKGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E +YK TD+Y+ + + + W D+S+ I WPL +P +SEKD N +I S
Sbjct: 126 DEAEFVYKCTDYYNPKVEISLFWADESLAINWPLSG--IPMLSEKDINGIKFEKIISN 181
>gi|296274085|ref|YP_003656716.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arcobacter nitrofigilis DSM
7299]
gi|296098259|gb|ADG94209.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arcobacter nitrofigilis DSM
7299]
Length = 189
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V IL F D RG+F ++YS + E GL F+QDN S++ T RG H+Q
Sbjct: 7 KLDGVLILNPHVFNDERGFFYESYSKRKFLENGLDYNFIQDNQSYNKYKHTFRGFHYQMN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P +Q LVR ++G I D +DIR+ SPTYG +VS +S++N Q+ IP GFAHG++TL
Sbjct: 67 PKSQTTLVRVVSGEIIDYVIDIRKKSPTYGQYVSQILSSDNHKQMLIPKGFAHGYLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N ++YK+ + YS HD + + D +I+I + + L +++KD + P L QID+ F Y
Sbjct: 127 NVTILYKMDELYSPNHDRILNFMDSTINIKLNIDKSEL-IIADKDNSAPMLAQIDNNFLY 185
Query: 182 DGL 184
+ +
Sbjct: 186 EEM 188
>gi|253568329|ref|ZP_04845740.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_6]
gi|251842402|gb|EES70482.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_6]
Length = 182
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + D RG+F + + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPNVYSDERGYFMEAFKKEEFEAKIGPVDFVQDNESKS-SFGVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR + G++ D+AVD+RR+SPT+G VS +S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVLKGKVLDVAVDLRRSSPTFGKHVSALLSEENKRQFFIPRGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+YKV + Y+ + ++ + + D+++ I W L ++ + +S KD+ +
Sbjct: 126 EAVFMYKVDNKYAPQAEASIVYNDETLGIDWMLGESQM-LLSPKDKEGMAFREA 178
>gi|187251274|ref|YP_001875756.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Elusimicrobium minutum
Pei191]
gi|186971434|gb|ACC98419.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Elusimicrobium minutum
Pei191]
Length = 185
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ + F+D RG+F ++Y+ K+ ++ G+ FVQDN SFS IRGLHFQ P
Sbjct: 7 EIEGLIVITPKIFKDERGYFFESYNKKVFEDAGIVSNFVQDNQSFSVK-NVIRGLHFQAP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKLVR G+++D+AVD+R S T+G W +E+S N YIP GFAHGF L
Sbjct: 66 PHAQAKLVRAQRGKVWDVAVDLRPQSKTFGQWFGVELSEENQKMFYIPRGFAHGFSVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ YK +FY+ E + G+ + D ++I W + V+EKD++ P+
Sbjct: 126 SAVFQYKCDNFYNKESEGGILYNDAVLNIDWKVPFGGE-IVNEKDKSYPWFE 176
>gi|254819210|ref|ZP_05224211.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium intracellulare
ATCC 13950]
Length = 209
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + DSRG F + + K + G + Q N S S G +RGLHF
Sbjct: 10 LKVPGAWEITPAVHGDSRGHFFEWLTDKGFRSFAGHRLDVRQANCSVS-SAGVLRGLHFA 68
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G +FD+ VDIR SPT+G W S+ + IYI G HGF+ L
Sbjct: 69 QVPPSQAKYVTCVRGAVFDVVVDIRVGSPTFGQWDSVLLDDTEHRTIYISEGLGHGFLAL 128
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ I WPL+D P++S++D P L+ +
Sbjct: 129 QDNSTVMYLCSAEYNPQREHTICATDPALGIDWPLVDGAPPTLSDRDAAAPSLDDV 184
>gi|29346238|ref|NP_809741.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|298385615|ref|ZP_06995173.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_14]
gi|29338133|gb|AAO75935.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|298261756|gb|EFI04622.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_14]
Length = 182
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ + D RG+F + + + + FVQDN S S G +RGLH+Q+
Sbjct: 7 EIDGVWLIEPNVYSDERGYFMEAFKKEEFEAKIGPVDFVQDNESKS-SFGVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR + G++ D+AVD+RR+SPT+G VS +S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVLKGKVLDVAVDLRRSSPTFGKHVSALLSEENKRQFFIPRGFAHGFVVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+YKV + Y+ + ++ + + D+++ I W L ++ + +S KD+
Sbjct: 126 EAVFMYKVDNKYAPQAEASIVYNDETLGIDWMLGESQM-LLSPKDKEGMAFRDA 178
>gi|157413784|ref|YP_001484650.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Prochlorococcus marinus str. MIT 9215]
gi|157388359|gb|ABV51064.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Prochlorococcus marinus str. MIT 9215]
Length = 192
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/182 (38%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+IN V ++K F D RG+F ++++S K++ F QDNHS S G +RG+H+Q
Sbjct: 13 SINEVILIKPDIFSDKRGFFYESWNSNSFKKIIGNTNFCQDNHSNSIK-GVLRGIHYQLN 71
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVRC G I+D+AVD+R+ S TY W+ ++++ N +IP GF HGF+TL
Sbjct: 72 PTAQGKLVRCTKGEIYDVAVDLRKRSNTYKEWIGVKLNELNKNLFWIPEGFGHGFLTLSD 131
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS-PFE 180
EV YKVT + + + W D ++I WPL + I P +S+KD + + ++ F
Sbjct: 132 IAEVQYKVTKPWDKLSEKSLLWNDSDLNIDWPL-NKISPIISKKDALGITIKEAENMDFV 190
Query: 181 YD 182
+
Sbjct: 191 FQ 192
>gi|63054926|gb|AAY29003.1| dTDP-dehydrorhamnose 3,5-epimerase [Stenotrophomonas maltophilia]
Length = 185
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 105/187 (56%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +L+ F D RG+F +T+++ ELGL FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCVVLEPAVFGDDRGFFFETWNAARFGELGLPTKFVQSNVS-SSAKGVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIR+ SPT+G W ++ +SA N Q +IP GFAHGF L
Sbjct: 67 -PQGKLVSVLEGEVYDVAVDIRQGSPTFGRWEAVLLSAENKRQFWIPEGFAHGFAVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y T+ Y E D+ V W D + + WP+ PS+S KD+ PFL I + D
Sbjct: 126 AIFSYLCTEVYLREFDAAVRWNDADLAVDWPVS---APSLSPKDEQAPFLKDIAA----D 178
Query: 183 GLPLLSL 189
LP+ S
Sbjct: 179 RLPVYSP 185
>gi|317052620|ref|YP_004113736.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurispirillum indicum
S5]
gi|316947704|gb|ADU67180.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurispirillum indicum
S5]
Length = 189
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +L+ R EDSRG+F +T+ L LG Q FVQDN S S CG +RGLH+Q P
Sbjct: 8 IADVLLLEPRVLEDSRGYFMETFRLDALHAALGFQVGFVQDNESCS-RCGVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+KLVR +AG + D+AVDIRR SPT+G VS E+SA N QI+IP GFAHGF+ L
Sbjct: 67 PFAQSKLVRVVAGCVLDVAVDIRRESPTFGACVSTELSAENKRQIFIPRGFAHGFVVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V YKV ++YS + D G+ + D + I W L L +S+KD + P L + +
Sbjct: 127 VAVVQYKVDNYYSSKSDRGIVYNDPHLGIDWRLPADQL-LLSDKDSHQPSLKEAE 180
>gi|322433405|ref|YP_004210622.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium sp. MP5ACTX9]
gi|321165794|gb|ADW71495.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium sp. MP5ACTX9]
Length = 200
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++L+ +++ D RGWFS+ ++ K LGL + FVQ+N S+S G +RGLH+Q
Sbjct: 21 LQDVKLLRPKQYPDERGWFSEVFTGKGFSALGLPEHFVQENQSYSSR-GVLRGLHYQ-LG 78
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR ++G I+D+AVD+R SP +G W E++ + ++IP GF HGF+ +
Sbjct: 79 KQQGKLVRVLSGTIWDVAVDLRPGSPDFGQWAGFELTGDELELLWIPEGFGHGFLVTSES 138
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
V+YK T +Y + + W D S+ I WPL +P++S KD +++Q + P Y
Sbjct: 139 ANVLYKTTGYYYPAGERCIRWDDPSLKIDWPLEGLGVPNISAKDATGSYMSQAELPPAY 197
>gi|113868861|ref|YP_727350.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia eutropha H16]
gi|113527637|emb|CAJ93982.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia eutropha H16]
Length = 183
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ + F D RG+F +T++++ ++ G++ FVQDNHS S +RGLH+Q
Sbjct: 10 LPEVLVIEPQVFSDQRGFFMETFNAQAFEQATGIRRTFVQDNHSGSVR-NVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KL+R IAG +FD+AVD+R SPTYG WV + +SA + Q++IP GFAHGF+ L
Sbjct: 68 QHPQGKLIRVIAGEVFDVAVDVRLGSPTYGKWVGVTVSAADKKQLWIPEGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ EV+YK TD++ EH+ + W D ++ + WPL P ++ KD L + D
Sbjct: 128 HAEVLYKTTDYWYPEHERTLLWNDPAVGVRWPL--NGAPLLTAKDAAGKLLTEAD 180
>gi|238026393|ref|YP_002910624.1| DTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme [Burkholderia
glumae BGR1]
gi|237875587|gb|ACR27920.1| DTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme [Burkholderia
glumae BGR1]
Length = 183
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ + F D+RG+F ++++++ + FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKLIEPKVFGDARGFFYESFTAREFAASVCEGVEFVQDNHSRSAR-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV E+S N LQ+++P GFAHGF+ L
Sbjct: 68 EHAQGKLVRVVEGSVFDVAVDIRKHSPNFGKWVGAELSGENHLQMWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ E + + W D I I WP+ P ++ KD Q +
Sbjct: 128 TAQFLYKTTDYWYPEFERSIIWNDPEIGIEWPI--DFEPKLAAKDAAGTRFAQAE 180
>gi|310780093|ref|YP_003968425.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ilyobacter polytropus DSM
2926]
gi|309749416|gb|ADO84077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ilyobacter polytropus DSM
2926]
Length = 190
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 105/177 (59%), Gaps = 6/177 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I+ D RG+F +TY+ + ++LG FVQDNHS S G +RGLHFQ
Sbjct: 10 KIKDLIIIDPVVLSDQRGFFMETYNKRYFEKLGFNLEFVQDNHSKSKK-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++Q KL+R G I+D+AVD+R+ SPT+G W L +S N YIP GFAHGF+TL+
Sbjct: 68 EHSQGKLIRVTRGSIWDVAVDLRKKSPTFGVWHGLILSQENKKLFYIPEGFAHGFLTLDD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQ 174
+TE+ YK TDFY E DSG+ W D I I WP + +SE+D + P +
Sbjct: 128 DTEIQYKCTDFYYPEFDSGINWDDPDIGIKWPFKEFGLEEENLILSERDMDQPSFKE 184
>gi|94264209|ref|ZP_01288005.1| dTDP-4-dehydrorhamnose 3,5-epimerase [delta proteobacterium MLMS-1]
gi|93455384|gb|EAT05585.1| dTDP-4-dehydrorhamnose 3,5-epimerase [delta proteobacterium MLMS-1]
Length = 188
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 77/176 (43%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I + +L+ + + D RG+F +T+ LL E LG + FVQDN S S G +RGLH+Q
Sbjct: 7 EIPDLLLLQPQVWGDERGYFMETFRLDLLTEVLGYRLDFVQDNESKS-VRGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ+KLVR + G ++D+AVDIR +SPT+G V LE+S N Q++IP GFAH F+ L
Sbjct: 66 PPFAQSKLVRVVEGVVWDVAVDIRPSSPTFGRHVGLELSGANKRQLFIPRGFAHAFVVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YKV ++Y+ E D G++ +D ++ I WPL L +S+KD +LP L +
Sbjct: 126 DHAFFQYKVDNYYAPECDRGISCRDPALAIDWPLPFEQL-RLSDKDSHLPLLQDAE 180
>gi|312131997|ref|YP_003999337.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Leadbetterella byssophila DSM
17132]
gi|311908543|gb|ADQ18984.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leadbetterella byssophila DSM
17132]
Length = 177
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V + R FED RG+F ++Y+ +L K G+ + F+QDN SFS G IRGLHFQR
Sbjct: 7 KLPGVFEIIPRIFEDDRGYFYESYNIELFKANGIPEEFLQDNQSFS-KKGVIRGLHFQRA 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR I G + D+ VDIR SPT+G + S ++ N +Y+P GFAHGF TLE
Sbjct: 66 PFAQGKLVRVIKGAVLDVVVDIRPESPTFGQYESFLLTEENKKMVYLPEGFAHGFSTLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK T+ Y + G+ + D ++I W + + P VS+KD LP +
Sbjct: 126 -AIFSYKCTNVYHKASEGGIIYNDPDLNIDWQVSN---PVVSDKDLELPSWKEFK 176
>gi|300717500|ref|YP_003742303.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erwinia billingiae Eb661]
gi|299063336|emb|CAX60456.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erwinia billingiae Eb661]
Length = 181
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V I + F D+RG+F +++S + E +G FVQDNHS S G +RGLH+Q
Sbjct: 7 SLTDVLIFEPTVFGDTRGFFFESFSQRFFDESVGRHVNFVQDNHSKSAK-GVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KLVRC+ G + DIAVDIR++S ++G WV + ++A N Q++IP GFAHGF+TL
Sbjct: 66 DPDAQGKLVRCVQGEVLDIAVDIRKSSSSFGKWVGVILNAENKRQLWIPEGFAHGFVTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T++Y+ + + W D I I W T +S+KD +
Sbjct: 126 DTAEFVYKTTNYYAKNSERSILWNDPEIGIDW---KTEDVLLSDKDLLASEFKNAE 178
>gi|258649191|ref|ZP_05736660.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella tannerae ATCC
51259]
gi|260850455|gb|EEX70324.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella tannerae ATCC
51259]
Length = 185
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/168 (41%), Positives = 105/168 (62%), Gaps = 2/168 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
IN V IL+ R FED+RG+F +T+ K +G + F+QDN S S G +RGLH+Q+
Sbjct: 8 INGVYILEPRVFEDARGYFMETWRKADFDKAIGYEVNFIQDNQSKS-SLGVLRGLHYQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+QAKLVR + G + D+AVD+RR+SPT+G +V++E+S N Q++IP GFAHGF
Sbjct: 67 DTSQAKLVRVLQGCVVDVAVDLRRSSPTFGKYVAVELSDKNQRQLFIPRGFAHGFQVTSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
YKV + YS ++ + + D ++ I WP+ D + +S+KD
Sbjct: 127 TAVFAYKVDNIYSPTTEASIRFDDPTLAIEWPIQDQNIIKLSDKDLQH 174
>gi|134294919|ref|YP_001118654.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia vietnamiensis
G4]
gi|134138076|gb|ABO53819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia vietnamiensis
G4]
Length = 183
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ + F D+RG+F ++++++ E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKLIEPKVFGDARGYFYESFNAREFAEHVAPGIEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+RR+SP +G WV + +SA+N Q+++P GFAHGF+ +
Sbjct: 68 EHTQGKLVRVVEGEVFDVAVDVRRSSPNFGKWVGVSLSADNHRQLWVPPGFAHGFLVVSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ EH+ + W D I I WPL P ++ KD L D
Sbjct: 128 SAQFLYKTTDYWFPEHERSIVWNDPDIGIAWPLDGE--PLLAVKDAAGMRLMDAD 180
>gi|239931312|ref|ZP_04688265.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces ghanaensis ATCC
14672]
gi|291439686|ref|ZP_06579076.1| 3,5-epimerase [Streptomyces ghanaensis ATCC 14672]
gi|291342581|gb|EFE69537.1| 3,5-epimerase [Streptomyces ghanaensis ATCC 14672]
Length = 197
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++++ + + + F D RG F + + + + E G Q N S S GT+RG+HF
Sbjct: 4 LSLSGAWVHEPKLFPDGRGSFHEWFKAPVFNEAVGHPLTLAQANMSVSSR-GTLRGIHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V+C+ G + D+ VDIR SPT+G W ++ + + +Y+ G HGFM L
Sbjct: 63 DVPPGQAKYVKCVRGAVLDVIVDIRTGSPTFGRWEAVRLDDRDHHAVYLSEGLGHGFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V+Y ++ Y+ E + G+ D ++ I WP + P +S KD+ P L +
Sbjct: 123 TEDATVVYLCSEGYAPEREHGIHPLDPALGIDWP--GDLTPLLSAKDEQAPTLAEA 176
>gi|221194744|ref|ZP_03567801.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium rimae ATCC 49626]
gi|221185648|gb|EEE18038.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium rimae ATCC 49626]
Length = 207
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 8/182 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V + + + D RG+F +TY G+ FVQDN S S G +RGLHFQ
Sbjct: 28 SIEGVMAVDVKTYGDRRGYFMETYRRDNFVAAGIDAEFVQDNQS-SSSQGVLRGLHFQI- 85
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ QAKLVR I G +FD+AVD+R SPT+G W + +S N Q ++P GFAHGF+ L
Sbjct: 86 AHPQAKLVRVIRGTVFDVAVDLRVGSPTWGKWEGIVLSEENHRQFFVPRGFAHGFLVLSD 145
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPL------LDTILPSVSEKDQNLPFLNQI 175
E YK D Y + GV W D I I WP D +S+KD+ P L+ +
Sbjct: 146 EAEFCYKCDDTYHPGDEGGVMWNDPEIGIVWPAFLGEKNFDPARVILSDKDKVHPPLSAL 205
Query: 176 DS 177
+
Sbjct: 206 KN 207
>gi|300770496|ref|ZP_07080375.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762972|gb|EFK59789.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 182
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ +L+ K+ DSRG+F ++++ K +L G FVQDN S+S G +RGLH Q
Sbjct: 7 KLQGCFVLEPDKYGDSRGYFMESFNEKTFNDLTGTSTHFVQDNQSYS-TRGVLRGLHAQA 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
YAQAKLVR + G + DIAVD+R S T+G V++ +SA+N LQ+++P GF HGF+ L
Sbjct: 66 GDYAQAKLVRVLEGEVIDIAVDVRAGSSTFGQHVAVRLSADNNLQLFVPRGFLHGFVVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK +FY+ E + GV D+ + I W + + +S+KD+ ++
Sbjct: 126 ETATFFYKCDNFYNKESECGVHPLDEDLAIDWKIPVEEM-ILSDKDKEAKGFKEV 179
>gi|291519959|emb|CBK75180.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Butyrivibrio fibrisolvens
16/4]
Length = 196
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ + F D RG+F +TY+ +K GL FVQDN S S G +RGLHFQ
Sbjct: 12 IEGLCVITPKVFGDDRGYFMETYNENDMKAEGLDYEFVQDNQSAS-KKGVLRGLHFQ-KN 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I+G ++D+AVD+R S T+G + +SA N Q IP GFAHGF+ +
Sbjct: 70 FPQDKLVRVISGEVYDVAVDLREGSKTFGQHYGILLSAENKKQFMIPKGFAHGFLVVSDY 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQ 174
E YKVTDFY + G+A+ D I++ WP+ + +S+KD+ +
Sbjct: 130 AEFCYKVTDFYHPNDEGGLAFDDPDINVQWPIPEGMTKEDLILSDKDKVNASFKE 184
>gi|166031255|ref|ZP_02234084.1| hypothetical protein DORFOR_00942 [Dorea formicigenerans ATCC
27755]
gi|166029102|gb|EDR47859.1| hypothetical protein DORFOR_00942 [Dorea formicigenerans ATCC
27755]
Length = 226
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 18/188 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ D+RG+F +TY+ K ++E GL FVQDN S S G +RGLHFQ
Sbjct: 37 IKGLCVIEPTVHGDARGYFMETYNQKDMEEAGLTMQFVQDNQSCS-TKGVLRGLHFQ-KE 94
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +S TYG W +E++ N Q YIP GFAHGF+ L
Sbjct: 95 FPQGKLVRVVKGSVFDVAVDLRSDSETYGKWFGVELTEENKKQFYIPEGFAHGFLVLSEI 154
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK TDFY + G+AW D I + WP L D ++S+KD
Sbjct: 155 AEFCYKCTDFYHPGDEGGLAWNDPEIGVEWPQLVGEYKGNASAEGYHLEDGTALNLSDKD 214
Query: 167 QNLPFLNQ 174
Q L
Sbjct: 215 QLWVGLKD 222
>gi|291520149|emb|CBK75370.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Butyrivibrio fibrisolvens
16/4]
Length = 192
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ + F D RG+F +TY+ +K GL FVQDN S S G +RGLHFQ
Sbjct: 12 IEGLCVITPKVFGDDRGYFMETYNENDMKAEGLDYEFVQDNQSAS-KKGVLRGLHFQ-KN 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I+G ++D+AVD+R S T+G + +SA N Q IP GFAHGF+ +
Sbjct: 70 FPQDKLVRVISGEVYDVAVDLREGSKTFGQHYGILLSAENKKQFMIPKGFAHGFLVVSDY 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQ 174
E YKVTDFY + G+A+ D I++ WP+ + +S+KD+ +
Sbjct: 130 AEFCYKVTDFYHPNDEGGLAFDDPDINVQWPIPEGMTKEDLILSDKDKVNASFKE 184
>gi|281423225|ref|ZP_06254138.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella oris F0302]
gi|281402561|gb|EFB33392.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella oris F0302]
Length = 182
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ F D+RG+F + + ++ + + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIKGVYIIEPHVFNDARGYFFEAWKNEEFQRNVGKINFIQDNESKSSY-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G++ D+AVDIR++SPT+G +V +E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGKVLDVAVDIRKSSPTFGKYVMVELSDENKRQFFIPRGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ +H++ + W D+ I I WP+ +T SEKD L +
Sbjct: 126 EAIFTYKVDNVYAPQHEASIRWNDEDIHIEWPI-ETKDVLTSEKDLKASSLKDAE 179
>gi|78065445|ref|YP_368214.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. 383]
gi|77966190|gb|ABB07570.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. 383]
Length = 183
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ + F D+RG+F ++++++ E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKLIEPKVFGDARGYFYESFNAREFAEHVAPGIEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+RR+SP +G WV + +SA+N Q+++P GFAHGF+ +
Sbjct: 68 EHTQGKLVRVVEGEVFDVAVDVRRSSPNFGKWVGVTLSADNHRQLWVPPGFAHGFLVVSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ EH+ + W D I I WPL P ++ KD L D
Sbjct: 128 SAQFLYKTTDYWFPEHERSIVWNDPDIGIVWPLDGE--PLLAVKDAAGMRLMDAD 180
>gi|91789857|ref|YP_550809.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaromonas sp. JS666]
gi|91699082|gb|ABE45911.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaromonas sp. JS666]
Length = 183
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V +L+ + F D+RG+F ++++ + G Q FVQDNHS S +RGLH+Q
Sbjct: 6 LAIPDVILLEPQVFGDARGFFFESFNQAKFEAAIGRQASFVQDNHSRSAR-KVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FD+AVDIR++SPT+G WV +SA+N QI++P GFAHGF+ +
Sbjct: 65 -VQQPQGKLVRVVQGEVFDVAVDIRKSSPTFGQWVGEILSADNKRQIWVPEGFAHGFVVM 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ E + +AW D +I I WPL P +S KDQ ++ +
Sbjct: 124 SDTAEFLYKTTDYYAPEFERCIAWNDPAIGIQWPLPLNTPPLLSSKDQMGLTMHDAE 180
>gi|86130453|ref|ZP_01049053.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dokdonia donghaensis MED134]
gi|85819128|gb|EAQ40287.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dokdonia donghaensis MED134]
Length = 184
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 3/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I + FED RG+F +++++K G + FVQDN S S G +RGLHFQ
Sbjct: 8 FKDLIICTPKVFEDDRGYFYESFNAKAFHSFAGFEPEFVQDNQSQS-TYGVLRGLHFQIG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ+KLVR +AG + D+ VD+R+N PTY S+ +SA N Q+++P G AHGF+TL
Sbjct: 67 EFAQSKLVRVVAGEVLDVVVDLRKNEPTYKKAYSIHLSAENKKQLFVPKGMAHGFVTLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
IYK ++Y+ E + G+A+ D S+ I W LLD +SEKD+ L + S
Sbjct: 127 TATFIYKCDNYYNKESERGLAYNDPSLQIDW-LLDKQDVILSEKDKENTMLADLPSN 182
>gi|148976929|ref|ZP_01813584.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrionales bacterium SWAT-3]
gi|145963803|gb|EDK29063.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrionales bacterium SWAT-3]
Length = 187
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 77/176 (43%), Positives = 109/176 (61%), Gaps = 6/176 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ F D RG+F +T+S K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 8 IPDVKIIEPTVFGDERGFFMETWSQKQFEELVTGKPTPFVQDNHSKS-KKGILRGLHYQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIR+ SPT+G WV +SA N Q+++P GFAHGF
Sbjct: 67 ENT-QGKLVRVVSGEVFDVAVDIRKGSPTFGQWVGEYLSAENKRQLWVPEGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK TD+Y+ + + W D++IDI WP +P +S KD+ +N+I+
Sbjct: 126 EEAEFVYKCTDYYNPAAEETLMWDDETIDIKWPFQG--VPLLSGKDRKGTLINKIN 179
>gi|20092576|ref|NP_618651.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina acetivorans
C2A]
gi|19917852|gb|AAM07131.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina acetivorans
C2A]
Length = 183
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 107/179 (59%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I + IL+ F D RG+F ++Y+ L L G FVQDN S S G IRGLH+Q
Sbjct: 7 EIKDLFILEPDVFGDDRGYFFESYNKMKLDALIGKMYHFVQDNESKS-SYGVIRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P++Q KLVR + G+++D+AVD+R++SPT+G W +E+S N Q IP GFAHGF L
Sbjct: 66 APFSQTKLVRVLQGKVYDVAVDLRKDSPTFGKWFGVELSGENKRQFIIPKGFAHGFSVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+YK ++Y E ++G+A+ D S++I W + D + VS KD LP + + F
Sbjct: 126 ETAVFVYKCDEYYHPETEAGIAYNDPSLNIDWKVRDEDI-KVSPKDGLLPRFEKAEINF 183
>gi|254458145|ref|ZP_05071571.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacterales bacterium
GD 1]
gi|207084981|gb|EDZ62267.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacterales bacterium
GD 1]
Length = 191
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 3/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I + D+RG+F +T+ L+E LG + F QDN S S G +RGLH+Q P
Sbjct: 8 IKDIIICEPEIHGDTRGYFVETFRQDKLEEFLGFKINFCQDNESKS-SKGVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+Q KL+R I GR+ DIAVDIR++SPT+G VS+E++A N Q+ IP GFAHGF+ LE
Sbjct: 67 PYSQTKLLRVIQGRVLDIAVDIRKDSPTFGEHVSIELTAENKKQLLIPHGFAHGFVVLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T YKV ++YS E+D G+A+ D + I W + D L ++S+KD P L + FEY
Sbjct: 127 DTIFAYKVDNYYSPENDRGIAFDDPDLGIDWQV-DFSLLNLSQKDTKQPRLKATNDLFEY 185
>gi|124004205|ref|ZP_01689051.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microscilla marina ATCC
23134]
gi|123990275|gb|EAY29774.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microscilla marina ATCC
23134]
Length = 183
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + + + R FED RG+F ++++ + G+ F+QDNHSFS G +RGLHFQ+P
Sbjct: 8 LKDLWLFEPRIFEDDRGYFYESFNQNEFTKATGITSPFIQDNHSFS-KKGVLRGLHFQKP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQAKL++ I G I+D+ VD+R++SPT+ + E+SA N Q+Y+P GFAHGF+ L
Sbjct: 67 PHAQAKLIKVIQGTIWDVVVDLRKDSPTFSQHLGFELSAGNKKQLYVPQGFAHGFIVLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ EV+YK +FY+ + +SG+ + D + I W + D+ +SEKD L + PF
Sbjct: 127 SAEVLYKCDNFYAPQAESGIIYNDSDLAIDWKI-DSSNIIISEKDAVLATFQPSNIPF 183
>gi|309779481|ref|ZP_07674242.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia sp. 5_7_47FAA]
gi|308921722|gb|EFP67358.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia sp. 5_7_47FAA]
Length = 197
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 8/190 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V + + D RG+F++ + + L G Q NHS+S GT+RGLHFQ PP
Sbjct: 11 LAGVVEINRKVIGDHRGYFTRFFCADELAAAGFDRPIAQINHSYSAKRGTVRGLHFQYPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLV C+ GR+FD+AVD+R SPT+ W ++E+SA + +P GFAHGF LE +
Sbjct: 71 HAEIKLVSCVRGRVFDVAVDLRAGSPTFLQWHAVELSAERHNSLLVPRGFAHGFQALEDD 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E++Y + Y+ + G+ D + I WPL T S++D+N P L +
Sbjct: 131 CELLYLTSTPYAQAAEDGLNPTDSRLGIAWPLDMTEC---SDRDRNHPPLTDA-----FA 182
Query: 183 GLPLLSLNME 192
G+ L +LN E
Sbjct: 183 GIALRALNPE 192
>gi|94972402|ref|YP_595620.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731939|emb|CAJ53956.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Lawsonia intracellularis
PHE/MN1-00]
Length = 180
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V ++K + +EDSRG+F +T++ + E+GLQ FVQDNHS S T+RGLHFQ
Sbjct: 7 SLEGVLLIKPKVWEDSRGYFLETWNKQRYIEIGLQLPFVQDNHSSSTLH-TLRGLHFQ-Q 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLV G +FD+AVD+R NSPT+G W + +S N Q++IP G AHGF L
Sbjct: 65 QYPQGKLVSVSLGEVFDVAVDLRINSPTFGSWFGVILSEKNHYQMWIPPGLAHGFCVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK T++Y + +S + W D I I WP+ P++S KD+
Sbjct: 125 RAHFHYKCTEYYYPQDESCICWNDPDIGIDWPVQH---PNLSHKDKIAQSWAD 174
>gi|299140529|ref|ZP_07033667.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella oris C735]
gi|298577495|gb|EFI49363.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella oris C735]
Length = 182
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ F D+RG+F + + ++ ++ + F+QDN S S G +RGLH+Q+
Sbjct: 7 EIKGVYIIEPHVFNDARGYFFEAWKNEEFQQYVGKINFIQDNESKSSY-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G++ D+AVDIR++SPT+G +V +E+S N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGKVLDVAVDIRKSSPTFGKYVMVELSDENKRQFFIPRGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ +H++ + W D+ I I WP+ +T SEKD L +
Sbjct: 126 EAIFTYKVDNVYAPQHEASIRWNDEDIHIEWPI-ETKDVLTSEKDLKASSLKDAE 179
>gi|302865678|ref|YP_003834315.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora aurantiaca
ATCC 27029]
gi|302568537|gb|ADL44739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora aurantiaca
ATCC 27029]
Length = 202
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + R+ D+RG F + Y L E G Q N S S G +RG+HF
Sbjct: 6 LSIEGAWEVTPRRHGDARGLFLEWYRFDRLAEAVGRPLRLAQANLSVSAR-GVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VD+R SPTYG W ++ + + +Y+ G HGF L
Sbjct: 65 DVPPGQAKYVTCVRGAVLDVVVDVRAGSPTYGRWEAVRLDDTDRRAVYLTEGLGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y + Y+ + V D + I WP P +SE+D P L +
Sbjct: 125 TDDATLSYLCSATYNPAAEHTVHPLDPDLGIDWP---AATPLLSERDAAAPRLAEA 177
>gi|187926902|ref|YP_001893247.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12J]
gi|241665231|ref|YP_002983590.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12D]
gi|187728656|gb|ACD29820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12J]
gi|240867258|gb|ACS64918.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12D]
Length = 197
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 8/190 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V + + D RG+F++ + + L G Q NHS+S GT+RGLHFQ PP
Sbjct: 11 LAGVVEISRKVIGDHRGYFTRFFCADELAAAGFDSPIAQINHSYSAKRGTVRGLHFQYPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLV C+ GR+FD+AVD+R SPT+ W ++E+SA + +P GFAHGF LE +
Sbjct: 71 HAEIKLVSCVRGRVFDVAVDLRAGSPTFLQWHAVELSAERHNSLLVPRGFAHGFQALEDD 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E++Y + Y+ + G+ D + I WPL T S++D+N P L +
Sbjct: 131 CELLYLTSTPYAQAAEDGINPTDSRLGIAWPLDITEC---SDRDRNHPPLTNA-----FA 182
Query: 183 GLPLLSLNME 192
G+ L +LN E
Sbjct: 183 GIALRALNPE 192
>gi|182415800|ref|YP_001820866.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Opitutus terrae PB90-1]
gi|177843014|gb|ACB77266.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Opitutus terrae PB90-1]
Length = 181
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ I++ + F D RG+F +++S + G+ FVQDN SFS GT+RG+H Q
Sbjct: 7 ELDGPLIIEPKVFGDQRGFFLESWSRPRYRAAGIALDFVQDNFSFSRR-GTLRGMHAQ-N 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q KLV G ++D+ VD+RRNSPT+G W L +SA N Q ++P GFAHGF+
Sbjct: 65 PHPQGKLVSVWQGEVWDVVVDLRRNSPTFGRWFGLTLSAENKRQFWVPPGFAHGFVVTSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
YKVTD Y+ + + + D ++ I WP+ D P +S +D P L + S
Sbjct: 125 TALFHYKVTDAYAPQDEIAFRFDDPAVGIRWPVSD---PILSTRDTQAPLLRDVPS 177
>gi|220910533|ref|YP_002485844.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7425]
gi|219867144|gb|ACL47483.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 7425]
Length = 181
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I+ + D RG+F++TY ++ E GL+ Q N S+++ GT+RG+H+Q P
Sbjct: 8 LKGAFIIDVEQRWDDRGFFARTYCAQEFLEQGLKPTIAQTNISYNYQKGTLRGMHYQTSP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ K+VRC G I+D+ +D+R +SPTY + +E++A N +YIP FAHG+ TL +
Sbjct: 68 ATEVKVVRCTWGAIYDVIIDMRPDSPTYLSHIGVELTAENHRALYIPEMFAHGYQTLTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
EV Y V++FY+ ++ GV + D +I I WPL +S+KD + P L Q
Sbjct: 128 AEVSYLVSEFYAPGYERGVRYDDPAIGIAWPLPVK---VISDKDAHWPLLQQ 176
>gi|167837611|ref|ZP_02464494.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia thailandensis
MSMB43]
Length = 183
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFAEQVEAGVEFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 68 RHAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVALSAENHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ E + + W D +I I WP+ P ++ KD +
Sbjct: 128 SAQFLYKTTDYWYPEFERSIVWNDPTIGIEWPI--DFEPLLAVKDAAGKRFVDAE 180
>gi|315502242|ref|YP_004081129.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Micromonospora sp. L5]
gi|315408861|gb|ADU06978.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora sp. L5]
Length = 202
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + R+ D+RG F + Y L E G Q N S S G +RG+HF
Sbjct: 6 LSIEGAWEVTPRRHGDARGLFLEWYRFDRLAEAVGRPLRLAQANLSVSAR-GVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VD+R SPTYG W ++ + + +Y+ G HGF L
Sbjct: 65 DVPPGQAKYVTCVRGAVLDVVVDVRAGSPTYGRWEAVRLDDTDRRAVYLAEGLGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y + Y+ + V D + I WP P +SE+D P L +
Sbjct: 125 TDDATLSYLCSATYNPAAEHTVHPLDPDLGIDWP---AATPLLSERDAAAPRLAEA 177
>gi|282897183|ref|ZP_06305185.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Raphidiopsis
brookii D9]
gi|281197835|gb|EFA72729.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Raphidiopsis
brookii D9]
Length = 181
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 63/171 (36%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I++ + D RG+F++T+ ++ E GL+ Q N SF+ GT+RG+H+Q P
Sbjct: 8 LAGAFIIELEEKPDHRGFFARTFCAQEFAEHGLKPTVAQCNLSFNHQKGTLRGMHYQITP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ KL+RC G I+D+ VD+R SPTY ++ +E++A N +Y+P FAHG+ L
Sbjct: 68 ATETKLIRCTQGAIYDVIVDMRPESPTYLSYIGVELTATNRCALYVPEMFAHGYQALTDG 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV+Y+V +FY+ ++ G+ + D +DI WPL T +S+KD++ P L
Sbjct: 128 AEVVYQVGEFYTPGYERGLRYDDPILDIVWPLNVTE---ISQKDRSWPLLK 175
>gi|299532674|ref|ZP_07046062.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni S44]
gi|298719309|gb|EFI60278.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Comamonas testosteroni S44]
Length = 183
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 111/175 (63%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I +++ K D RG F +++ L + G F+QDNHS S G +RGLH+Q P
Sbjct: 8 IPEIKLFKPTIHRDGRGLFVESFRQDLFNQATGTNYEFIQDNHSRSSK-GVLRGLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR I+G +FD+AVDIRR+S T+G WV E+SA N Q++IP GFAHGF+ L
Sbjct: 67 PHAQGKLVRVISGAVFDVAVDIRRSSLTFGKWVGAELSAENHRQLWIPPGFAHGFVVLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+++YK T +Y+ E D G+ W D I I WP LD I S+SEKDQ+ P Q +
Sbjct: 127 TADLVYKATAYYAPESDRGLLWNDPDIAIAWPQLD-IDFSLSEKDQHQPAFTQAE 180
>gi|224826608|ref|ZP_03699709.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lutiella nitroferrum 2002]
gi|224601209|gb|EEG07391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lutiella nitroferrum 2002]
Length = 180
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+N + +L+ F D RG F +T++++ L G + FVQDN S S +RGLH+Q
Sbjct: 8 LNGLLLLEPVVFADERGEFCETFNARRFAALIGREVCFVQDNRSCSRP-NVLRGLHYQH- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLV+ G ++D+AVD+RR SP++G W + +SA N Q++IP GFAHGF+ L+
Sbjct: 66 AHPQGKLVQVTQGAVWDVAVDLRRASPSFGQWYGVTLSAENRRQLWIPEGFAHGFLALQD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E YKV+D++ + + W D ++ I WPL T P +S+KD+ +
Sbjct: 126 GAEFCYKVSDYWHAGDEYCIRWDDPALGIDWPL--TQPPVLSDKDRQGLSFAEAP 178
>gi|313904869|ref|ZP_07838241.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium cellulosolvens 6]
gi|313470302|gb|EFR65632.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium cellulosolvens 6]
Length = 193
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 68/168 (40%), Positives = 98/168 (58%), Gaps = 5/168 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ F D+RG+F +TY+ G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLYVIEPSVFGDNRGYFMETYNYNDFAAAGIDCKFVQDNQSAS-KKGVLRGLHFQ-IN 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVD+R S T+G W +E++A N Q +IP FAHGF+ L
Sbjct: 71 HPQDKLVRVIVGSVFDVAVDLRPGSKTFGKWFGVELTAENKKQFFIPKNFAHGFLVLSDY 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP---SVSEKDQ 167
E YKVTDFY + G+ W D + + WP+ + + +S+KD+
Sbjct: 131 AEFCYKVTDFYHPNDEGGIMWNDPQVGVEWPMPEGMTAGDLILSDKDK 178
>gi|17231981|ref|NP_488529.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc sp. PCC 7120]
gi|17133625|dbj|BAB76188.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc sp. PCC 7120]
Length = 181
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 8/182 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I + +L+ + F DSRG F ++Y+ + +LG+ FVQDNHSFS +RGLH+Q
Sbjct: 7 KIPAISLLEPQVFSDSRGLFFESYNQQNFTDKLGITVNFVQDNHSFSQH-NVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G IFD+AVDIR++SP++G WV E+SA N Q+++P GFAHGF+ L
Sbjct: 66 IQ-PQGKLVRAVVGTIFDVAVDIRKSSPSFGQWVGYELSAENKRQLWVPPGFAHGFLVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EVIYK TD+Y+ D + W D + I WPL + P +S KD +
Sbjct: 125 EVAEVIYKTTDYYAPGGDRTILWNDPDLAINWPLKEP--PILSAKDSQGQPFKSAE---V 179
Query: 181 YD 182
Y+
Sbjct: 180 YE 181
>gi|17230322|ref|NP_486870.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc sp. PCC 7120]
gi|17131924|dbj|BAB74529.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc sp. PCC 7120]
Length = 189
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 63/194 (32%), Positives = 112/194 (57%), Gaps = 12/194 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ I+ + D RG+F++T+ + GL+ V Q N S+++ GT+RG+H+Q
Sbjct: 7 SLKDAFIIDLEEKPDHRGFFARTFCANEFANHGLKPVVAQCNLSYNYKKGTLRGMHYQLR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P A+ KL+RCI G I+D+ +D+R SPT+ + +E++A+N +Y+P FAHG+ L
Sbjct: 67 PAAETKLIRCIKGAIYDVIIDMRPESPTFLSHIGVELTADNRRALYVPEMFAHGYQALTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ EV+Y+V +FY+ ++ G+ + D +I WPL T +S+KD + P L
Sbjct: 127 DAEVVYQVGEFYTPGYEKGLRYNDPFFNIEWPLDVT---VISDKDASWPLL--------- 174
Query: 182 DGLPLLSLNMERDL 195
+ +P+ S + +
Sbjct: 175 ETIPIGSPDPVEAV 188
>gi|163814426|ref|ZP_02205815.1| hypothetical protein COPEUT_00577 [Coprococcus eutactus ATCC 27759]
gi|158450061|gb|EDP27056.1| hypothetical protein COPEUT_00577 [Coprococcus eutactus ATCC 27759]
Length = 202
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 105/195 (53%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ D+RG+F +TY+ K +KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCVIEPAVHGDARGYFMETYNEKDMKEAGIDIHFVQDNQSMS-TKGVLRGLHFQ-KQ 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R +S TYG W + +SA N Q IP GFAHGF+ L
Sbjct: 71 YPQCKLVRAVRGTVFDVAVDLRSDSATYGKWYGVALSAENKKQFLIPEGFAHGFLVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S+KD
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIVWPKLKGEYKGSASVEGYTLEDGTALNLSDKD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QKWLGLKD---TFKF 202
>gi|163754602|ref|ZP_02161724.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Kordia algicida OT-1]
gi|161325543|gb|EDP96870.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Kordia algicida OT-1]
Length = 177
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 5/171 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ + F D+RG F ++Y+ + FVQDN S S G +RGLHFQ
Sbjct: 8 LAGCFVIEPQVFGDARGSFMESYNEQKFPA---DVHFVQDNQSVSQK-GVLRGLHFQTGE 63
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQAKLVR I G + D+AVD+R NS T+G S+ ++A N Q+++P GFAHGF L+ +
Sbjct: 64 HAQAKLVRVIRGEVLDVAVDVRPNSETFGQHFSIILNAENNKQLFVPRGFAHGFAVLQDD 123
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
T YK +FY+ + +SG+ + D I I W L + +S+KD+ LP L
Sbjct: 124 TIFAYKCDNFYNKDAESGIIYNDPEIAIDWML-NEDEIILSDKDKLLPNLK 173
>gi|75907336|ref|YP_321632.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anabaena variabilis ATCC
29413]
gi|75701061|gb|ABA20737.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anabaena variabilis ATCC
29413]
Length = 189
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 64/194 (32%), Positives = 112/194 (57%), Gaps = 12/194 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ I+ + D RG+F++T+ + GL+ V Q N S+++ GT+RG+H+Q
Sbjct: 7 SLQDAFIIDLEEKPDHRGFFARTFCANEFAAHGLKPVVAQCNLSYNYKKGTLRGMHYQLR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P A+ KL+RCI G I+D+ +D+R SPT+ + +E++A+N +Y+P FAHG+ L
Sbjct: 67 PAAETKLIRCIKGAIYDVIIDMRPESPTFLSHIGVELTADNRRALYVPEMFAHGYQALTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ EV+Y+V +FY+ ++ G+ + D +I WPL T +S+KD N P L
Sbjct: 127 DAEVVYQVGEFYTPGYEKGLRYNDPFFNIEWPLDVT---VISDKDANWPLL--------- 174
Query: 182 DGLPLLSLNMERDL 195
+ +P+ S + +
Sbjct: 175 ETIPIGSPDPVEAV 188
>gi|194290475|ref|YP_002006382.1| dtdp-4,deoxyrhamnose 3,5 epimerase [Cupriavidus taiwanensis LMG
19424]
gi|193224310|emb|CAQ70321.1| dTDP-4,deoxyrhamnose 3,5 epimerase [Cupriavidus taiwanensis LMG
19424]
Length = 183
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V IL+ + F DSRG+F ++++ + +E G + FVQDNHS S +RGLH+Q
Sbjct: 9 SLPEVLILEPKVFGDSRGFFFESFNQRDFEEAIGQRCTFVQDNHSRSAR-NVLRGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++Q KLVR + G +FD+AVD+R++SP G WV + +SA N Q++IP GFAHGF+
Sbjct: 68 -QHSQGKLVRVVDGEVFDVAVDMRKSSPNLGKWVGVTLSAKNKRQLWIPAGFAHGFVVTS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YKVTD++ EH+ + W D + I WP+ + P ++ KD L + D
Sbjct: 127 DVAEFLYKVTDYWHPEHERSLVWNDPHVGIEWPIDGS--PFLAAKDSAGKLLTEAD 180
>gi|294665241|ref|ZP_06730538.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292604992|gb|EFF48346.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 185
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +++ R F D RG F + ++++ + G F+Q N S S G +RGLH+Q P
Sbjct: 7 SLPGCFVVEPRVFGDERGQFFEAWNAERFDQHGFSARFLQSNISTSTK-GVLRGLHYQWP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G ++D+AVDIRR SP +G W + +SA N Q +IP GFAHGF L
Sbjct: 66 R-PQGKLVSVLEGEVYDVAVDIRRGSPYFGQWTAAILSAENNRQFWIPEGFAHGFAVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
Y TD Y + D+ V W D +I + WP+ P +S KD+ PFL I +
Sbjct: 125 RAVFSYLCTDIYVHDADASVRWDDATIGVDWPIS---SPILSAKDRAAPFLEDIAEERLP 181
Query: 180 EYDG 183
Y G
Sbjct: 182 VYQG 185
>gi|127512335|ref|YP_001093532.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella loihica PV-4]
gi|126637630|gb|ABO23273.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella loihica PV-4]
Length = 181
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V+I++ F D RG+F +T++ K +EL G FVQDNHS S G +RGLH+Q
Sbjct: 7 KIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKHTQFVQDNHSKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR I G +FD+AVDIR+ SPT+G WV +SA N Q+++P GFAHGF
Sbjct: 66 TENT-QGKLVRVIYGEVFDVAVDIRKGSPTFGKWVGEYLSAENNRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
+ E +YK TD+Y+ + + W DK + I WP P +S KD N
Sbjct: 125 SEHAEFVYKCTDYYNPHMECSIQWDDKFLSIEWPF--ESEPILSSKDSN 171
>gi|53720294|ref|YP_109280.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Burkholderia pseudomallei
K96243]
gi|53725972|ref|YP_103575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei ATCC
23344]
gi|124385294|ref|YP_001028707.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei NCTC
10229]
gi|126452584|ref|YP_001067377.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1106a]
gi|134280426|ref|ZP_01767137.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
305]
gi|167000834|ref|ZP_02266639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei PRL-20]
gi|167720870|ref|ZP_02404106.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
DM98]
gi|167739852|ref|ZP_02412626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei 14]
gi|167817074|ref|ZP_02448754.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei 91]
gi|167825484|ref|ZP_02456955.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei 9]
gi|167846974|ref|ZP_02472482.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
B7210]
gi|167895556|ref|ZP_02482958.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
7894]
gi|167912205|ref|ZP_02499296.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
112]
gi|167920166|ref|ZP_02507257.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
BCC215]
gi|226193862|ref|ZP_03789464.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
Pakistan 9]
gi|237813506|ref|YP_002897957.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
MSHR346]
gi|238560979|ref|ZP_04609372.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei GB8 horse
4]
gi|242316360|ref|ZP_04815376.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1106b]
gi|254175405|ref|ZP_04882065.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei ATCC
10399]
gi|254180916|ref|ZP_04887514.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1655]
gi|254191761|ref|ZP_04898264.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
Pasteur 52237]
gi|254202265|ref|ZP_04908628.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei FMH]
gi|254207598|ref|ZP_04913948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei JHU]
gi|254261524|ref|ZP_04952578.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1710a]
gi|254298971|ref|ZP_04966421.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
406e]
gi|254356500|ref|ZP_04972776.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei
2002721280]
gi|262193266|ref|YP_001081387.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei NCTC
10247]
gi|284159929|ref|YP_001060114.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
668]
gi|3135676|gb|AAD05456.1| putative dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase [Burkholderia
pseudomallei 1026b]
gi|13518095|gb|AAK27393.1| putative dTDP-4-keto-6-deoxy-D-glucose [Burkholderia mallei]
gi|52210708|emb|CAH36692.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Burkholderia pseudomallei
K96243]
gi|52429395|gb|AAU49988.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei ATCC
23344]
gi|124293314|gb|ABN02583.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei NCTC
10229]
gi|126226226|gb|ABN89766.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1106a]
gi|134248433|gb|EBA48516.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
305]
gi|147746512|gb|EDK53589.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei FMH]
gi|147751492|gb|EDK58559.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei JHU]
gi|148025497|gb|EDK83651.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei
2002721280]
gi|157809171|gb|EDO86341.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
406e]
gi|157939432|gb|EDO95102.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
Pasteur 52237]
gi|160696449|gb|EDP86419.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei ATCC
10399]
gi|184211455|gb|EDU08498.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1655]
gi|225934167|gb|EEH30152.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
Pakistan 9]
gi|237506837|gb|ACQ99155.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
MSHR346]
gi|238525295|gb|EEP88723.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei GB8 horse
4]
gi|242139599|gb|EES26001.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1106b]
gi|243063264|gb|EES45450.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei PRL-20]
gi|254220213|gb|EET09597.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
1710a]
gi|261835086|gb|ABO07153.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei NCTC
10247]
gi|283775101|gb|ABN83873.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
668]
Length = 183
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ EL FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAREFTELVEPGIEFVQDNHSRSAR-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVD+RR+SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVDGEVFDVAVDVRRSSPNFGKWVGVRLSAENKRQLWVPAGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ E + + W DK I I WP+ P V+ KD +++ +
Sbjct: 128 SADFLYKTTDYWYPEFERSILWSDKQIGIEWPI--DREPLVAAKDAAGKAISEAE 180
>gi|294624435|ref|ZP_06703123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601258|gb|EFF45307.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 185
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +++ R F D RG F + ++++ + G F+Q N S S G +RGLH+Q P
Sbjct: 7 SLPGCFVVEPRVFGDERGQFFEAWNAERFDQHGFSARFLQSNISTSTK-GVLRGLHYQWP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G ++D+AVDIRR SP +G W + +SA N Q +IP GFAHGF L
Sbjct: 66 R-PQGKLVSVLEGEVYDVAVDIRRGSPYFGQWTAAILSAENNRQFWIPEGFAHGFAVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
Y TD Y + D+ V W D +I + WP+ P +S KD+ PFL I +
Sbjct: 125 RAVFSYLCTDIYVHDADASVRWDDATIGVDWPIS---SPILSAKDRAAPFLEDIAEERLP 181
Query: 180 EYDG 183
Y G
Sbjct: 182 VYQG 185
>gi|87123105|ref|ZP_01078956.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. RS9917]
gi|86168825|gb|EAQ70081.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. RS9917]
Length = 196
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +L ++F D RGWF ++++ + +G FVQDNHS S G +RGLH+Q P
Sbjct: 14 LSGPLLLTPQRFGDDRGWFFESWNQRRFDAAVGEHVAFVQDNHSRS-SQGVLRGLHYQLP 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
QAKLVR GRIFD+ VD+R +SP+ G W +E+SA+N Q+++P GFAHGF+TL
Sbjct: 73 AAPQAKLVRASVGRIFDVVVDLRTSSPSNGQWAGVELSADNQQQLWVPEGFAHGFLTLSA 132
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFL 172
EV YK ++S E + + W D ++ I+WPL + S+SEKD P L
Sbjct: 133 VAEVQYKTRGYWSREQERAIRWDDPALAISWPLENLEGTAVSLSEKDAQAPTL 185
>gi|295102107|emb|CBK99652.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Faecalibacterium prausnitzii
L2-6]
Length = 188
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F D RG+F +TY E G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIPGVVVIEPQVFGDDRGYFMETYQKDQFAEAGIDKEFVQDNQSRS-TRGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G ++D+AVD R NS T+G WV + +S N YIP GFAHGF+ L
Sbjct: 68 NHTQGKLVRVTRGEVYDVAVDCRPNSATFGKWVGVILSEENKKMFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TD Y + G+ + D ++++ WP S KD+ FEY
Sbjct: 128 VAEFCYKCTDVYDPTSEGGIPYDDPTVNVQWP-DCGCEHKTSAKDKLHEPF--AAQKFEY 184
>gi|254195983|ref|ZP_04902408.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
S13]
gi|169652727|gb|EDS85420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia pseudomallei
S13]
Length = 215
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ EL FVQDNHS S G +RGLH+Q
Sbjct: 42 LPEVKIIEPKVFGDARGFFFESFNAREFTELVEPGIEFVQDNHSRSAR-GVLRGLHYQI- 99
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVD+RR+SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 100 QHAQGKLVRVVDGEVFDVAVDVRRSSPNFGKWVGVRLSAENKRQLWVPAGFAHGFVVLSE 159
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + +YK TD++ E + + W DK I I WP+ P V+ KD +++ +
Sbjct: 160 SADFLYKTTDYWYPEFERSILWSDKQIGIEWPI--DREPLVAAKDAAGKAISEAE 212
>gi|301060779|ref|ZP_07201594.1| dTDP-4-dehydrorhamnose 3,5-epimerase [delta proteobacterium NaphS2]
gi|300445176|gb|EFK09126.1| dTDP-4-dehydrorhamnose 3,5-epimerase [delta proteobacterium NaphS2]
Length = 187
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 80/184 (43%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V +++ R FED RG+F +T+ S+ ++G+ F+QDNHS S GT+RGLH+Q Q
Sbjct: 13 VILIEPRVFEDDRGFFMETFHSEKYAKMGMSKPFLQDNHSHSRR-GTLRGLHYQ-LENPQ 70
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
KLV + G IFD+AVDIR SP +G W +S N Q+Y+P GFAHGF L +V
Sbjct: 71 GKLVYVVRGEIFDVAVDIRAGSPDFGKWTGNLLSEKNRRQLYVPGGFAHGFCVLSETADV 130
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLP 185
IYK TD Y+ + GV W D +++I WPL P +S+KD P L ID LP
Sbjct: 131 IYKCTDHYAPGDEYGVFWADNAVNIKWPL---ARPILSKKDSENPLLADIDDS----RLP 183
Query: 186 LLSL 189
L +
Sbjct: 184 LYAA 187
>gi|320107280|ref|YP_004182870.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Terriglobus saanensis SP1PR4]
gi|319925801|gb|ADV82876.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Terriglobus saanensis SP1PR4]
Length = 199
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V++++ D RGWF++ ++++ +E GL FVQDN S S G +RGLH+Q
Sbjct: 8 LRDVKLIEPTLHRDGRGWFAEAFNARSFREQGLPSDFVQDNQSMS-QRGVLRGLHYQ-LG 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNG----LQIYIPTGFAHGFMT 118
Q KLVRC++G I+D+AVD+RR SP +G W + ++IP GF HGF+
Sbjct: 66 QPQGKLVRCVSGHIWDVAVDLRRTSPDFGKWAGFHLRPLTSEGKLQMLWIPEGFGHGFLV 125
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQID 176
L E++YK T+ Y + D V W D I I WPL D + P VS KD PFLN +
Sbjct: 126 LSETAELLYKTTNHYFPQGDRAVRWNDPEIAIEWPLAELDGLEPIVSAKDTVAPFLNSAE 185
Query: 177 SP 178
P
Sbjct: 186 LP 187
>gi|304382458|ref|ZP_07364956.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella marshii DSM 16973]
gi|304336411|gb|EFM02649.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella marshii DSM 16973]
Length = 182
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ + F D RG+F + + + ++ + F+QDN S S G +RGLH+Q+
Sbjct: 7 KIDGVFIIEPKVFYDERGYFFEAFKQEEFEQNVGKVTFIQDNESKSSY-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I GR+ D+AVDIR++SPT+G +V +E++ N Q +IP GFAHGF+ L
Sbjct: 66 EYSQAKLVRVIKGRVIDVAVDIRKSSPTFGQYVMVELNDENKRQFFIPKGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV Y+ + ++ + + D I I WP+ + + VS+KD L +
Sbjct: 126 EAVFTYKVDAAYAPQAEASIRFNDSDIAIPWPISEKEI-MVSQKDLLAGGLRDSE 179
>gi|296242299|ref|YP_003649786.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosphaera aggregans DSM
11486]
gi|296094883|gb|ADG90834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermosphaera aggregans DSM
11486]
Length = 183
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 70/181 (38%), Positives = 107/181 (59%), Gaps = 6/181 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I + +++ +F D RG+F++ Y + FVQ N SFS G IRGLH+Q
Sbjct: 9 LDIPGIVLVEYTRFPDERGFFAELYKRTDFLANDIPYDFVQTNLSFS-RRGVIRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV I+GR++D+AVDIR+ SP +G +V + + G ++IP GFAHGF LE
Sbjct: 68 KPMEQGKLVYVISGRVYDVAVDIRKGSPWFGKYVGVFLEP--GYALWIPPGFAHGFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+Y VT YS +H+ + W D+ I + WP+ + + +SEKD+ P L + ++ FE
Sbjct: 126 D-AYFLYLVTKEYSPQHERCIKWDDQEIGVQWPVKENV--ILSEKDKKCPPLREAETNFE 182
Query: 181 Y 181
Y
Sbjct: 183 Y 183
>gi|253565574|ref|ZP_04843029.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
gi|251945853|gb|EES86260.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_2_5]
Length = 182
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ + F D RG+F + + + Q F+QDN S S GT+RGLH+Q+
Sbjct: 7 EIDGVWIIEPKIFFDPRGYFMEAFKQQEFDATIGQINFIQDNESQSSF-GTLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G + D+AVD+R++SPT+G +S+ +S N Q++IP GFAHGF+
Sbjct: 66 TYSQAKLVRVIKGEVLDVAVDLRKSSPTFGKHISVLLSDENKRQLFIPRGFAHGFLVKSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ + ++ + + D ++ I WP+ D+ L +SEKD+ + +
Sbjct: 126 IAIFTYKVDNIYAPQSEASILYNDPALAIDWPIADSQL-VMSEKDKQAGAFREAE 179
>gi|254294496|ref|YP_003060519.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hirschia baltica ATCC 49814]
gi|254043027|gb|ACT59822.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hirschia baltica ATCC 49814]
Length = 176
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 72/171 (42%), Positives = 105/171 (61%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +L+ K D RG+F++T+ + +E G++ FVQ N SFS + GT+RG+H Q P
Sbjct: 8 LQDAYLLEVEKRGDDRGFFTRTFCAAEFREQGIEISFVQQNSSFSAEKGTLRGMHKQNAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLVRCI G I DI VD+R S T+ W + E+S N ++ +P GF HGF TLE N
Sbjct: 68 HAEDKLVRCIKGSIVDIIVDLRPESSTFKKWEAFELSETNRKELLVPRGFGHGFQTLEDN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV Y V+++Y+ E +SGV D + I WPL + +S+KD+N P
Sbjct: 128 VEVTYLVSNYYTPEAESGVRHDDPAFGIEWPLP---ITVMSDKDRNWPLFE 175
>gi|167563827|ref|ZP_02356743.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia oklahomensis
EO147]
Length = 183
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ EL FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKAFGDARGFFFESFNAREFAELVEPGVEFVQDNHSRSAR-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVD+R++SP +G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDVRKSSPNFGKWVGVNLSAENKRQLWVPAGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +YK TD++ E + + W DK I I WP+ P V+ KD L + +
Sbjct: 128 TADFLYKTTDYWYPEFERSILWSDKQIGIDWPM--DREPLVAAKDAAGKLLGEAE 180
>gi|53713585|ref|YP_099577.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis YCH46]
gi|60681865|ref|YP_212009.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis NCTC 9343]
gi|265763906|ref|ZP_06092474.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
gi|52216450|dbj|BAD49043.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides fragilis YCH46]
gi|60493299|emb|CAH08083.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis NCTC 9343]
gi|263256514|gb|EEZ27860.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
gi|301163357|emb|CBW22907.1| putative LPS biosynthesis related dTDP-4-dehydrorhamnose
3,5-epimerase [Bacteroides fragilis 638R]
Length = 182
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I++ + F D RG+F + + + Q F+QDN S S GT+RGLH+Q+
Sbjct: 7 EIDGVWIIEPKIFFDPRGYFMEAFKQQEFDATIGQINFIQDNESQSSF-GTLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKLVR I G + D+AVD+R++SPT+G +S+ +S N Q++IP GFAHGF+
Sbjct: 66 AYSQAKLVRVIKGEVLDVAVDLRKSSPTFGKHISVLLSDENKRQLFIPRGFAHGFLVKSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ + ++ + + D ++ I WP+ D+ L +SEKD+ + +
Sbjct: 126 IAIFTYKVDNIYAPQSEASILYNDPALAIDWPIADSQL-VMSEKDKQAGAFREAE 179
>gi|14601228|ref|NP_147761.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeropyrum pernix K1]
gi|5104850|dbj|BAA80164.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeropyrum pernix K1]
Length = 187
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 69/181 (38%), Positives = 105/181 (58%), Gaps = 4/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I + ++K +F D RG+F++ Y G+ F+Q N S+S+ G +RGLH+Q
Sbjct: 9 LEIPDIVLIKYERFSDPRGFFAELYKRTPFLAEGIPYDFIQVNLSYSYK-GVVRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ Q KLV + GR+ D+AVDIR+ SP YG VS E+ + ++IP GFAHGF LE
Sbjct: 68 KPHEQGKLVYVLYGRVLDVAVDIRKGSPWYGKHVSAELKPG--MALWIPPGFAHGFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+Y VT Y + + + W D +++I WP++D VS KD+N P L + ++ F
Sbjct: 126 D-ALFLYLVTKEYFKDSERCIKWNDPNLEIKWPIIDDDKVIVSGKDRNCPPLKEAETNFS 184
Query: 181 Y 181
Y
Sbjct: 185 Y 185
>gi|86742432|ref|YP_482832.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. CcI3]
gi|86569294|gb|ABD13103.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. CcI3]
Length = 207
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + R+ DSRG F + + S L E G Q NHS S GT+RG+H+
Sbjct: 6 LSVPDAWVFTPRQHSDSRGTFLEWFRSDALAEAVGHPLTLSQANHSVS-RAGTLRGVHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ GR+ D VDIR SPTYG + ++ + + +Y+ G H FM L
Sbjct: 65 QVPPSQAKYVTCVHGRVLDCVVDIRVGSPTYGTFAAVVLDDVDRRGLYVAEGLGHAFMAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + Y + Y+ + GV D + + WP D + P +S+KD P L + +
Sbjct: 125 TDDAAISYLCSTPYTPGREYGVHPLDPDLALPWP--DDLAPLLSDKDTAAPSLKEAE 179
>gi|308272531|emb|CBX29135.1| dTDP-4-dehydrorhamnose 3,5-epimerase [uncultured Desulfobacterium
sp.]
Length = 180
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 104/173 (60%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ F D+RG+F++ Y + +G++ FVQDN S S +RGLH+Q
Sbjct: 8 LKGVILIEPPVFSDNRGYFTEVYKKSVYDSIGIERNFVQDNLSCSSK-DVLRGLHYQ-VK 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLV+ I G IFD+AVD+R S T+G W S +S N +++IP FAHGF L
Sbjct: 66 QKQAKLVQVIKGEIFDVAVDLRPYSKTFGKWESFILSDKNNRRVFIPEDFAHGFCVLSDT 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++YK ++ Y+ + G+ W D +++I WP+ + P VSEKD+ LP +++
Sbjct: 126 AYLLYKCSEHYAPGDEGGIIWCDGTLNINWPVKN---PIVSEKDRKLPAFSEV 175
>gi|124265818|ref|YP_001019822.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylibium petroleiphilum
PM1]
gi|124258593|gb|ABM93587.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylibium petroleiphilum
PM1]
Length = 184
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V + + F D+RG+ ++++ + + G FV D HS S G +RGLH+QRP
Sbjct: 8 LPEVLLFEPDMFRDARGFVVESFNQRAFEAAVGHAANFVLDVHSRSQR-GVLRGLHYQRP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ QAKLVR G ++D+AVD+RR+S +G W +E+SA Q++IP GFAHGF+ L
Sbjct: 67 PHTQAKLVRVSVGSVYDVAVDLRRSSRCFGQWTGIELSAERAQQLWIPQGFAHGFLVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ EV YK T++Y + + W D IDI WP LD I P +S KD P L Q FE
Sbjct: 127 SAEVQYKATNYYESHAEGAIRWDDPLIDIKWPALD-IQPLLSLKDAAAPTLAQASVLFE 184
>gi|265763212|ref|ZP_06091780.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
gi|263255820|gb|EEZ27166.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_16]
Length = 187
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ R F+D RG+F ++++ + Q FVQDN S S G IRGLHFQ+PP
Sbjct: 8 IEGLVIIEPRLFQDDRGYFFESFNQGEFESKVCQTTFVQDNESKSSY-GVIRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ+KLVR I G + D+AVDIR++SPT+G +S+E++ +N Q +IP GFAHGF L
Sbjct: 67 FAQSKLVRVIKGAVLDVAVDIRKDSPTFGKHISVELTGDNHRQFFIPRGFAHGFCVLSKE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
YK +FY E + +AW D ++I+W + + +S KD+N L ++ S Y
Sbjct: 127 VVFQYKCDNFYHPESEGTIAWNDIDLNISWRIPLEDV-VLSRKDKNALPLKEMYSDVNY 184
>gi|111225335|ref|YP_716129.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia alni ACN14a]
gi|111152867|emb|CAJ64614.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) (dTDP-L-rhamnose synthetase) [Frankia
alni ACN14a]
Length = 208
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + R+ DSRG F + + S L E +G Q NHS S GT+RG+H+
Sbjct: 6 LSVPDAWVFTPRQHSDSRGTFLEWFRSDALAEVVGHPLTLSQANHSVS-RAGTLRGVHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ GR+ D VDIR SPT+G + ++ + + +Y+ G H FM L
Sbjct: 65 QVPPSQAKYVTCVRGRVLDCVVDIRTGSPTFGTFAAVLLDDVDRRGLYVSEGLGHAFMAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ + Y + Y+ + GV D + + WP D + P +SEKD P L + +S
Sbjct: 125 TDDAAISYLCSTPYTPGREHGVDPLDPDLALPWP--DDLTPLLSEKDAAAPSLKEAES 180
>gi|282900183|ref|ZP_06308139.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein
[Cylindrospermopsis raciborskii CS-505]
gi|281194932|gb|EFA69873.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein
[Cylindrospermopsis raciborskii CS-505]
Length = 181
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ I++ + D RG+F++T+ ++ E GL+ Q N SF+ GT+RG+H+Q
Sbjct: 7 SLAGAFIIELEEKPDHRGFFARTFCAQEFAEHGLKPTVAQCNLSFNHQKGTLRGMHYQIT 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P + KL+RC G I+D+ VD+R SPTY ++ +E++A N +Y+P FAHG+ L
Sbjct: 67 PATETKLIRCTQGAIYDVIVDMRPESPTYLSYIGVELTATNRRALYVPEMFAHGYQALTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV+Y+V +FY+ ++ G+ + D +DI WPL T +S+KD++ P L
Sbjct: 127 GAEVVYQVGEFYTPGYERGLRYDDPILDIVWPLNVTE---ISQKDRSWPLLE 175
>gi|149909224|ref|ZP_01897881.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Moritella sp. PE36]
gi|149807748|gb|EDM67694.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Moritella sp. PE36]
Length = 177
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I+ +++ F D RG+F +T+ + ++ LG + FVQDN+S S +RGLHFQ+
Sbjct: 7 SIDGALVIEPDVFGDERGFFMETFQAARYRDVLGGEFDFVQDNYSRSSK-NVLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G ++D+AVDIR SPTYG L ++A N LQ ++P G AHGF+ L
Sbjct: 66 TK-QQGKLVRVVLGDVYDVAVDIRLASPTYGQCHGLRLNAENKLQFWLPPGLAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T++Y + + W D ++I WP + P +S+KD+ N +
Sbjct: 125 DLADFEYKCTNYYDNRDEGCLIWNDPVLNIDWPCDN---PLLSDKDKMGLKFNDL 176
>gi|255536063|ref|YP_003096434.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteriaceae bacterium
3519-10]
gi|255342259|gb|ACU08372.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteriaceae bacterium
3519-10]
Length = 181
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 106/173 (61%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ D RG+F + ++ K ++L GL FVQDN S S G +RG+H Q+
Sbjct: 8 LKDCYIIEPTIIGDERGYFYEKFNEKKWEDLTGLNGHFVQDNISKSTY-GVLRGIHLQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLV C+ G++FD+AVD+R +SPT+G W +E+S N LQ+Y+P GF HGF L
Sbjct: 67 DHAQAKLVSCLEGKVFDVAVDLRESSPTFGQWFGVELSPENKLQLYVPRGFGHGFSVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK +FY E + V W DK ++I W L + + +SEKD++LP ++
Sbjct: 127 TAVFSYKCDNFYHKESEGSVIWNDKDLNIDWKLPENDI-LLSEKDRHLPTFSE 178
>gi|254776839|ref|ZP_05218355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 201
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + D+RG F + + K + G + Q N S S G +RGLHF
Sbjct: 6 LKVPGAWEITPTVHGDARGHFFEWLTDKGFRSFAGHRLDVRQANCSVSAA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G +FD+ VDIR SPT+G W S+ + IYI G HGF+ L
Sbjct: 65 QVPPSQAKYVTCVRGSVFDVVVDIRVGSPTFGQWDSVLLDDAEHRTIYISEGLGHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + D ++ I WPL+ P++SE+D P L ++
Sbjct: 125 QDNSTVMYLCSAEYNPGREHTICATDPALGIDWPLVAGAAPTLSERDAAAPSLEEV 180
>gi|29726036|gb|AAO88960.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 177
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I++ + F D RG+F +T+ K +E LG+ FVQDNHS S G +RGLHFQ+
Sbjct: 8 IPDVKIIEPKVFGDERGFFLETFHLKRYQEMLGINLDFVQDNHSRSTK-GVLRGLHFQKT 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVDIR+ SPT+G W + +S N Q ++P GFAHGF+ L
Sbjct: 67 K-PQGKLVRVVRGEVFDVAVDIRKGSPTFGKWEGVILSEENKRQFWVPPGFAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y + + W D +DI WP + S+KD L+ +
Sbjct: 126 IADFEYKCTDYYDASDEGSLLWSDPELDIDWP--NVSEIKTSQKDSAAGLLSDL 177
>gi|86147256|ref|ZP_01065571.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio sp. MED222]
gi|85834971|gb|EAQ53114.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio sp. MED222]
Length = 181
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 111/175 (63%), Gaps = 6/175 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ F D RG+F +T+S ++L G FVQDNHS S G +RGLH+Q
Sbjct: 8 IRDVKIIEPSVFGDERGFFMETWSQDKFEKLVTGKATSFVQDNHSKS-KKGILRGLHYQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIR++SPT+G WV +SA N Q+++P GFAHGF
Sbjct: 67 QNT-QGKLVRVVSGEVFDVAVDIRKDSPTFGQWVGELLSAENKRQLWVPEGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ E + + W+D++++I WP+ P++SEKD +N+I
Sbjct: 126 EEAEFVYKCTDYYNPEAEHCLFWKDETVNIKWPIESP--PTLSEKDSIGKRINEI 178
>gi|327394237|dbj|BAK11659.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC [Pantoea ananatis
AJ13355]
Length = 177
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ + D RG+F +T+ + +EL FVQDN+S S +RGLHFQ+
Sbjct: 7 KIADVKIIQPAVYGDDRGFFLETFEKRRYQELLETHLEFVQDNYSRSGRH-VLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVDIR SPT+G W S+ +S N Q++IP G AHGF+ L
Sbjct: 66 TE-PQGKLVRVVRGEVFDVAVDIRPGSPTFGQWESILLSEENKTQLWIPPGLAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK T +Y+ + ++ + W D + I WP+ P +S KDQ L ++
Sbjct: 125 DVADFEYKCTQYYNPKDEACLMWNDPDVAIQWPVE---QPILSVKDQQGLSLQEL 176
>gi|313114790|ref|ZP_07800290.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622845|gb|EFQ06300.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 197
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F D RG+F +TY E G+ FVQDN S S G +RGLHFQ
Sbjct: 19 EIPGVVVIEPQVFGDDRGYFMETYQKDQFAEAGIDKEFVQDNQSRS-TRGVLRGLHFQ-K 76
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+AVD R +S T+G WV + +S N YIP GFAHGF+ L
Sbjct: 77 NHTQGKLVRVTKGEVFDVAVDCRPHSATFGKWVGVTLSEENKKMFYIPEGFAHGFLVLSD 136
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TD Y + G+ + D ++++ WP S KD+ FEY
Sbjct: 137 VAEFCYKCTDVYDPTSEGGIPYDDPTVNVQWP-DCGCEHKTSAKDKLHEPF--AAQKFEY 193
>gi|261822264|ref|YP_003260370.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pectobacterium wasabiae
WPP163]
gi|261606277|gb|ACX88763.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pectobacterium wasabiae
WPP163]
Length = 178
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 6/172 (3%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+I++ + F D+RG+F +T+ K ++ L + FVQDNHS S G +RGLHFQ
Sbjct: 10 GAKIIQPKVFGDARGFFLETFEKKRYQKMLDIDLDFVQDNHSRSSK-GVLRGLHFQ-KTN 67
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
Q KLVR + G +FD+ VDIR++SPTYG W + +S N Q ++P G AHGF+ L
Sbjct: 68 PQGKLVRVVRGEVFDVVVDIRQDSPTYGKWCGVTLSEENKTQFWLPPGLAHGFVVLSDIV 127
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y + + W D + I WP+ + P +SEKD+ +
Sbjct: 128 DFEYKCTDYYDPSDEGCLLWNDPKVGIKWPISE---PLLSEKDKLGKLFKDV 176
>gi|253572901|ref|ZP_04850299.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_6]
gi|251837533|gb|EES65626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 1_1_6]
Length = 190
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/179 (38%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I++ + ++D RG+F +++++ ++ G+ FVQDN S S G +RGLH+Q+
Sbjct: 8 IESVLIIEPKVYQDERGYFFESFNANEFSEKTGMDIHFVQDNESMS-SYGVMRGLHYQKM 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY Q+KLVRC+ G + D+AVDIR SPT+G V++E++ N Q ++P GFAHGF L
Sbjct: 67 PYTQSKLVRCVKGAVLDVAVDIRYGSPTFGQHVAVELTEENHRQFFVPRGFAHGFAVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
YK +FY E D+G+ +D+S+ I W + +SEKD L F+
Sbjct: 127 TALFQYKCDNFYHPEADAGINIKDESLGIDWKVPVE-HAILSEKDLKHACLKDASYDFD 184
>gi|325261285|ref|ZP_08128023.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. D5]
gi|324032739|gb|EGB94016.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. D5]
Length = 202
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 79/183 (43%), Positives = 102/183 (55%), Gaps = 18/183 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
IN + I++ DSRG+F +TY+ K ++E GL FVQDN S S G +RGLH+Q
Sbjct: 13 INGLCIIEPAVHGDSRGYFMETYNQKDMEEAGLGMNFVQDNQS-SSSKGVLRGLHYQ-KE 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVD+R S TYG W +E++ +N Q YIP GFAHGF+ L
Sbjct: 71 FPQGKLVRVIKGNVFDVAVDLRSGSETYGKWFGVELTEDNKKQFYIPEGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK TDFY + G+AW D I + WP L D +SEKD
Sbjct: 131 AEFCYKCTDFYHPGDEGGLAWNDPEIGVCWPQVVGEYKGNASAEGYRLEDGTGLMLSEKD 190
Query: 167 QNL 169
Q
Sbjct: 191 QKW 193
>gi|284047955|ref|YP_003398294.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidaminococcus fermentans
DSM 20731]
gi|283952176|gb|ADB46979.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidaminococcus fermentans
DSM 20731]
Length = 201
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 103/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + I++ D+RG+F +TY+ K ++E G FVQDN S S G +RGLHFQ
Sbjct: 12 IDGLCIIEPAVHGDARGYFMETYNKKDMEEAGFHIDFVQDNQSMSTK-GVLRGLHFQ-KH 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R +S TYG W +E++ N Q IP GFAHGF+ L
Sbjct: 70 CPQCKLVRAVRGSVFDVAVDLRADSKTYGKWYGVELTDENKKQFLIPEGFAHGFLVLSDE 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV D++ + G+AW D I I WP + D ++SEKD
Sbjct: 130 AEFCYKVNDYWHPNDEGGMAWNDPEIGIKWPQVVGEYPGSASSEGYQMEDGTPLNLSEKD 189
Query: 167 QNLPFLNQIDSPFEY 181
+ F++
Sbjct: 190 TKWLGIRD---TFKF 201
>gi|291527356|emb|CBK92942.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium rectale M104/1]
Length = 216
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/195 (42%), Positives = 114/195 (58%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ D+RG+F +TY+SK ++E G+ VFVQDN S S G +RGLHFQ
Sbjct: 27 IEGLCIIEPTVHGDNRGYFMETYNSKDMQEAGIDRVFVQDNQSCS-TKGVLRGLHFQ-KE 84
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y QAKLVR + G +FD+AVD+R +S TYG W +E++ N Q IP GFAHGF+ L
Sbjct: 85 YPQAKLVRAVKGSVFDVAVDLRSDSKTYGKWFGVELTEENKKQFLIPEGFAHGFLVLSDV 144
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKVTDF+ + +SG+AW D +I I WP L D ++S+KD
Sbjct: 145 AEFCYKVTDFWHLGDESGLAWNDPAIGIEWPQLVGEYPGSADGSGYTLEDGTPINLSDKD 204
Query: 167 QNLPFLNQIDSPFEY 181
Q L ++ F++
Sbjct: 205 QKWETL---ENTFKF 216
>gi|29726017|gb|AAO88944.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Vibrio cholerae]
Length = 186
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/179 (37%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV---FVQDNHSFSFDCGTIRGLHF 58
I V+I++ FED+RG+F +T+ +++ D FVQDNHS S G +RGLH+
Sbjct: 7 KIPDVKIIEPIVFEDARGFFMETWQQNKFEKMVGSDKEITFVQDNHS-SSIKGVLRGLHY 65
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
Q+ Q KLVR G++FD+AVD+R++S T+G WV + +S +N +++P GFAHGF
Sbjct: 66 QKINT-QGKLVRVTKGKVFDVAVDVRKDSVTFGEWVGVILSEDNRRMLWVPEGFAHGFYV 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
L E +YK TD+Y+ E + ++W D+ I+I WP+ + +S+ D+ L +
Sbjct: 125 LSKEAEFLYKCTDYYNAESNVTISWNDEDINIDWPIEGQV--VLSDTDREGISLEDARN 181
>gi|285019455|ref|YP_003377166.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Xanthomonas albilineans GPE
PC73]
gi|283474673|emb|CBA17172.1| probable dtdp-4-dehydrorhamnose 3,5-epimerase protein [Xanthomonas
albilineans]
Length = 185
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ ++ F D+RG+F + ++++ + GL FVQ N S S G +RGLH+Q P
Sbjct: 7 SLPGCLAIEPAVFGDARGYFFEAWNAERFGQHGLPTHFVQSNVSTSAK-GVLRGLHYQWP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV + G ++D+AVDIRR SP +G WV+ +S N Q +IP GFAHGF L
Sbjct: 66 R-PQGKLVSVLEGEVYDVAVDIRRGSPYFGRWVAAILSGENRKQFWIPEGFAHGFAVLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y TD Y E D+ V W D +I + WP+ T +S+KD P L I
Sbjct: 125 RAVFSYLCTDVYVKEADAVVRWDDPAIAVDWPINAT---VLSQKDAVAPCLADI 175
>gi|167586360|ref|ZP_02378748.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia ubonensis Bu]
Length = 183
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F ++++++ E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNAREFAEQVEPGVEFVQDNHSRSEK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR I G +FD+AVDIR++SPT+G WV + +SA N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVIQGEVFDVAVDIRKSSPTFGEWVGVYLSAANHRQLWVPAGFAHGFLALTA 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TDF+ E++ + W D + ITWPL P ++ KD L +
Sbjct: 128 SCEFLYKTTDFWYPEYERCLQWNDPDVGITWPL--DTPPVLATKDAAGVRLVDAE 180
>gi|145588444|ref|YP_001155041.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145046850|gb|ABP33477.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 184
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ F D RGWF++++++ + GL FVQDNHSFS T+RGLH+Q
Sbjct: 10 IHDVLVIEPTVFGDERGWFTESFNAVDFADATGLTVNFVQDNHSFSRQW-TLRGLHYQ-L 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AG +FD+AVDIR+ SPTYG WV +E+SA N Q+++P G AHGF+ L
Sbjct: 68 EKTQGKLVRVVAGSVFDVAVDIRKESPTYGKWVGIELSAQNHKQLWVPPGLAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E +YK TD+Y + ++ + W D ++ I WPL + + P+++ KD + F
Sbjct: 128 TAEFLYKTTDYYHPQSEACLVWNDPTVAIAWPLPEGVNPNMNAKDMSGLAW-DAAPKF 184
>gi|269957344|ref|YP_003327133.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylanimonas cellulosilytica
DSM 15894]
gi|269306025|gb|ACZ31575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylanimonas cellulosilytica
DSM 15894]
Length = 205
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 84/180 (46%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I L R+F D RG F + + E G Q N S S G +RG+HF
Sbjct: 6 LKIEGAWELTPRQFGDDRGVFLEWFKGDAFAEAVGHGIDLRQANLSVS-AAGVLRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C+ G + D+ VDIR SPTYG W S+ + + IY+ G H F +L
Sbjct: 65 DVPPSQAKYVTCVKGAVLDVVVDIRVGSPTYGQWDSVLLDDVDRRAIYLSEGLGHAFCSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E + V Y + Y+ + G+ D I I WP + P +S+KD P L +
Sbjct: 125 EDGSTVTYLCSAPYAPGREHGIHPLDPEIGIVWPTTGRDGSPLAPLLSDKDAAAPTLAEA 184
>gi|254420592|ref|ZP_05034316.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brevundimonas sp. BAL3]
gi|196186769|gb|EDX81745.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brevundimonas sp. BAL3]
Length = 170
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 93/169 (55%), Positives = 116/169 (68%), Gaps = 1/169 (0%)
Query: 22 SQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAV 81
+TYS G+ FVQDN SFS GTIRGLHFQRPP+AQAKLVRC+ G I D AV
Sbjct: 1 METYSEASATAAGVNARFVQDNQSFSAFQGTIRGLHFQRPPHAQAKLVRCVRGSIMDYAV 60
Query: 82 DIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGV 141
DIRR SPTYG V+ +++A G Q+++P GFAH F+TLE + EV YKV+D Y+ + D G+
Sbjct: 61 DIRRGSPTYGQHVAAKLTAVGGEQLFVPVGFAHAFVTLEPDVEVAYKVSDVYAPDCDGGI 120
Query: 142 AWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLPLLSLN 190
W D I I WPL ++ +S+KD+ LP L + DSPFEYDGLPL L
Sbjct: 121 VWSDPIIGIDWPLPESGA-VLSDKDKILPTLAEFDSPFEYDGLPLAPLP 168
>gi|41410322|ref|NP_963158.1| RmlC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41399156|gb|AAS06774.1| RmlC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 201
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + D+RG F + + K + G + Q N S S G +RGLHF
Sbjct: 6 LKVPGAWEITPTVHGDARGHFFEWLTDKGFRSFAGHRLDVRQANCSVSAA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G +FD+ VDIR SPT+G W S+ + IYI G HGF+ L
Sbjct: 65 QVPLSQAKYVTCVRGSVFDVVVDIRVGSPTFGQWDSVLLDDAEHRTIYISEGLGHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + D ++ I WPL+ P++SE+D P L ++
Sbjct: 125 QDNSTVMYLCSAEYNPGREHTICATDPALGIDWPLVAGAAPTLSERDAAAPSLEEV 180
>gi|152974748|ref|YP_001374265.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023500|gb|ABS21270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus cytotoxicus NVH
391-98]
Length = 182
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 118/175 (67%), Gaps = 3/175 (1%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
+L+ R FED RG+F+++Y+ K ++LG+ F+QDN SFS GT+RGLHFQ+ P AQ
Sbjct: 11 ALLLQPRLFEDHRGFFTESYNWKEFQKLGVSYSFIQDNLSFSAKAGTVRGLHFQKEPKAQ 70
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
KL++ + G I+D+ VD+R +SPTY W +S N Q+ +P GFAHGF TL NT V
Sbjct: 71 TKLIQVLKGAIYDVIVDLRVSSPTYKEWKGFILSEENHRQLLVPKGFAHGFCTLVPNTLV 130
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+YKV ++YS +HD G+ W D+S+ ITWP+ + P +SEKD+ LP +Q F+
Sbjct: 131 MYKVDEYYSSDHDDGLYWNDESLAITWPVSE---PILSEKDKALPTFDQYHDCFK 182
>gi|312113624|ref|YP_004011220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodomicrobium vannielii ATCC
17100]
gi|311218753|gb|ADP70121.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodomicrobium vannielii ATCC
17100]
Length = 183
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RG+F++T+ ++ + GL FVQ + S + GT+RG+HFQ PP
Sbjct: 8 LEGAFMIEPEPFRDERGFFARTFCTREFEARGLVCNFVQHSISSTIRKGTVRGMHFQTPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + K+V C G IFD+ VD+RR +PT+ W E++A N ++YIP GFAHGF +L +
Sbjct: 68 HGEVKVVTCTRGAIFDVIVDLRRAAPTFLRWQGFELTAENRRRLYIPEGFAHGFQSLTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
EV Y ++ FY+ E GV D I I WPL + S+SEKD+N P N +PF
Sbjct: 128 VEVSYLISAFYAPESAGGVPHDDPLIGIEWPLS---ISSISEKDRNWPPFNASAAPF 181
>gi|288800122|ref|ZP_06405581.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella sp. oral taxon 299
str. F0039]
gi|288333370|gb|EFC71849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella sp. oral taxon 299
str. F0039]
Length = 181
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I++++ F D RG+F ++++SK E F+QDN S S G +RGLH+Q+
Sbjct: 7 ELKGVWIIESKVFNDDRGYFFESWNSKSFTEHIGAINFIQDNESKSSY-GVLRGLHYQKG 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQAKLVR I G + D+AVD+RR+SPT+G +V++E+S N Q++IP GFAHGF+ L
Sbjct: 66 DAAQAKLVRVIKGNVLDVAVDLRRSSPTFGKYVAVELSETNKRQLFIPRGFAHGFLVLSP 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ E ++ + W D S+ I WP+ D + S KD L +
Sbjct: 126 EAIFCYKVDNVYAPEKEATLMWNDDSVSINWPIKDGL--IFSVKDLKGTSLKDAE 178
>gi|167757831|ref|ZP_02429958.1| hypothetical protein CLOSCI_00162 [Clostridium scindens ATCC 35704]
gi|167664485|gb|EDS08615.1| hypothetical protein CLOSCI_00162 [Clostridium scindens ATCC 35704]
Length = 202
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 78/188 (41%), Positives = 103/188 (54%), Gaps = 18/188 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ DSRG+F +TY+ + ++E GL FVQDN S S G +RGLHFQ
Sbjct: 13 IQGLCVIEPAVHGDSRGYFMETYNQRDMEEAGLTMNFVQDNQSCSTK-GVLRGLHFQ-KE 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVD+R NS TYG W +E++ N Q YIP GFAHGF+ L
Sbjct: 71 FPQGKLVRAIKGSVFDVAVDLRSNSETYGKWFGIELTEENKKQFYIPEGFAHGFLVLSEI 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YK TDFY + G+AW D I I WP L D ++S+KD
Sbjct: 131 AEFCYKCTDFYHPGDEGGLAWNDPEIGIKWPQLVGEYQGSASAEGYHLEDGTALNLSDKD 190
Query: 167 QNLPFLNQ 174
Q +
Sbjct: 191 QLWVGVKD 198
>gi|254374810|ref|ZP_04990291.1| hypothetical protein FTDG_00986 [Francisella novicida GA99-3548]
gi|151572529|gb|EDN38183.1| hypothetical protein FTDG_00986 [Francisella novicida GA99-3548]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 83/181 (45%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKL-LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + D RG+F +++ LG + F QDN S S G IRGLH+Q
Sbjct: 7 KIADVVICEPILHGDERGYFIESFREDRLFDFLGYKINFCQDNESKS-SYGVIRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PPYAQ KLVR I G++ D+AVDIR+ SPT+G V +E+SA+N Q+ +P GFAHGF+ LE
Sbjct: 66 PPYAQTKLVRVIQGKVLDVAVDIRKGSPTFGQHVVVELSAHNKRQLLVPRGFAHGFVVLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T YKV ++YS E D G+A+ DK I I W L L +S KD+ P L++ D FE
Sbjct: 126 NDTIFSYKVDNYYSPECDRGIAFDDKDIAIDWQLPMGSL-KLSTKDKTQPKLSETDDLFE 184
Query: 181 Y 181
+
Sbjct: 185 F 185
>gi|887635|emb|CAA61415.1| strX [Streptomyces glaucescens]
gi|3256045|emb|CAA07373.1| StrX [Streptomyces glaucescens]
Length = 182
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ + D RG+FS+++ + + GL+ VQ N SF+ G++RG H+Q P
Sbjct: 8 LAGAALIELSELRDERGFFSRSFCREEFERAGLEPAVVQCNLSFNHRAGSLRGFHYQTEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+AK +RC G I+D+ VD+R +SPT+ E++A+N L +++P FAH ++TL +
Sbjct: 68 NAEAKTIRCTRGAIYDVIVDLRPDSPTFLRHFGAELTADNRLALHVPRNFAHAYLTLADD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
TE +Y+V+ Y+ + G+ W D ++ + WP VS+KD P L+++
Sbjct: 128 TETVYQVSAAYTPGAERGLRWNDPALGVEWPAPVK---LVSDKDAGWPLLSEVP 178
>gi|298527744|ref|ZP_07015148.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511396|gb|EFI35298.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 183
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 109/171 (63%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+N +++ + D RG+FS+T+ + +++GL Q N +F+ GT+RG+HFQ P
Sbjct: 8 LNGAYLIRLERHNDDRGFFSRTFCRREFEKMGLNSEISQCNLAFNNKAGTLRGMHFQTQP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y++ KLV C++G +FD+ +D+R S TY CW ++SA+N +Y+P GFAHG+ TL N
Sbjct: 68 YSEVKLVGCVSGSVFDVIIDLREESTTYSCWFGTKLSADNLEMLYVPKGFAHGYQTLVDN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
V Y V++ Y E+++GV W D ++I+WPL + +VS+KD P LN
Sbjct: 128 AAVSYMVSESYCPEYENGVRWNDPVLNISWPLE---VITVSKKDSAWPLLN 175
>gi|160943814|ref|ZP_02091045.1| hypothetical protein FAEPRAM212_01312 [Faecalibacterium prausnitzii
M21/2]
gi|158444988|gb|EDP21991.1| hypothetical protein FAEPRAM212_01312 [Faecalibacterium prausnitzii
M21/2]
gi|295104041|emb|CBL01585.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Faecalibacterium prausnitzii
SL3/3]
Length = 188
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 69/180 (38%), Positives = 95/180 (52%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F D RG+F +TY E G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIPGVVVIEPQVFGDDRGYFMETYQKDQFAEAGIDKEFVQDNQSRS-TRGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G ++D+AVD R +S T+G WV + +S +N YIP GFAHGF+ L
Sbjct: 68 NHTQGKLVRVTKGEVYDVAVDCRPHSATFGKWVGVTLSEDNKKMFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
E YK TD Y + G+ + D ++++ WP S KD+ FEY
Sbjct: 128 VAEFCYKCTDVYDPTSEGGIPYDDPTVNVQWP-DCGCEHKTSAKDKLHEPF--AAQKFEY 184
>gi|318042943|ref|ZP_07974899.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. CB0101]
Length = 205
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/188 (38%), Positives = 106/188 (56%), Gaps = 14/188 (7%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQ-DVFVQDNHSFSFDCGTIRG 55
+ + ++ R F D RG+F ++++ + G FVQDNHS S G +RG
Sbjct: 12 LPLAGPLLITPRVFGDDRGFFFESWNQRAFAAALEADGQPVPEFVQDNHSRSSQ-GVLRG 70
Query: 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHG 115
LH+Q PP+ Q KLVRC+ G IFD+AVD+RR S ++G WV +SA N Q+++P GFAHG
Sbjct: 71 LHYQLPPHPQGKLVRCVLGEIFDVAVDLRRGSASFGQWVGARLSAANHQQLWVPAGFAHG 130
Query: 116 FMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT--------ILPSVSEKDQ 167
F TL + EV+YK TDF+S + + + W D + I W + P +S+KD
Sbjct: 131 FFTLSEHAEVLYKTTDFWSRDCERAIRWDDPQLAIAWQQEQGAAADAPPPVAPLLSDKDA 190
Query: 168 NLPFLNQI 175
P L +
Sbjct: 191 IAPLLADL 198
>gi|78184213|ref|YP_376648.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Synechococcus sp.
CC9902]
gi|78168507|gb|ABB25604.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. CC9902]
Length = 196
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 99/173 (57%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ ++ R F D RGWF ++++ K E G F QDNHS S G +RGLH+Q
Sbjct: 14 ISGPLLITPRAFGDDRGWFFESWNQKRFNEAVGQSVEFSQDNHSRSIQ-GVLRGLHYQLA 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QAKLVR G IFD+A+DIR+ SPT G WV +SA N Q++IP GFAHGF+TL
Sbjct: 73 PEPQAKLVRSSVGSIFDVAIDIRQTSPTCGQWVGAVLSAENKAQLWIPEGFAHGFLTLSP 132
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFL 172
EV YK F++ + + W D ++ I WP + S+S+KD P
Sbjct: 133 VAEVQYKARGFWNKACERAIRWDDPNLAIDWPQAELNGTAISLSDKDAEAPDF 185
>gi|325685364|gb|EGD27471.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 202
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +TY+ +KE G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPAVHGDDRGYFMETYNENDMKEAGFDINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 FPQCKLVRAVRGDVFDVAVDLRSDSKTYGKWYGVELTAENKKQFLIPEGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S++D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPQLVGEYPGSADASGYALEDGTKLTLSDRD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QKWLGLKD---TFKF 202
>gi|258653357|ref|YP_003202513.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nakamurella multipartita DSM
44233]
gi|258556582|gb|ACV79524.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nakamurella multipartita DSM
44233]
Length = 181
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 3/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V I++ + D RG+F++++ GL VQ N S++ GT+RG+HFQ P
Sbjct: 8 IDGVAIVELEERRDDRGFFARSFCQDEFAAHGLLPEVVQCNLSYNHRAGTLRGMHFQLEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AKLVRCI+G I DI VD+R SPTY V++E+SA N Y+P FAHGF TL N
Sbjct: 68 ATEAKLVRCISGAIVDIIVDLRPGSPTYRQHVAVELSAANRRSFYVPPMFAHGFQTLVDN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
TEV+Y+V++ Y+ + G+ + D ++ ++WPL + +S+KD + P L + +P
Sbjct: 128 TEVLYQVSERYTPGQERGLRYDDPALGLSWPLPVSA---ISDKDASWPLLEPVGAP 180
>gi|225350728|ref|YP_002720717.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae
WA1]
gi|225216412|gb|ACN85145.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae
WA1]
Length = 192
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 80/183 (43%), Positives = 113/183 (61%), Gaps = 3/183 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++IN + I + R F DSRG+F +TYS K E G+++ FVQDN S S +RGLH+Q
Sbjct: 8 LDINGLFIAEPRIFGDSRGYFLETYSEKDFFEAGIKEKFVQDNQSKS-TKNVLRGLHYQ- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Y QAKLVR + G +FD+AVD+R +SPT+G + + ++ N Q +IP GFAHGF+ L
Sbjct: 66 KKYCQAKLVRVLEGEVFDVAVDLRNDSPTFGKYYGVLLTEENKKQFFIPKGFAHGFIVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ YK +DFY E + G+ + DK+I+I W DT VS+KD LP ++ F
Sbjct: 126 ESAVFAYKCSDFYHPEEEGGIIYNDKNINIDW-TCDTKDVLVSDKDLKLPEFDKNKKYFS 184
Query: 181 YDG 183
DG
Sbjct: 185 LDG 187
>gi|313206230|ref|YP_004045407.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Riemerella anatipestifer DSM
15868]
gi|312445546|gb|ADQ81901.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Riemerella anatipestifer DSM
15868]
Length = 181
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/178 (39%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ FED RG+F + ++ K ++L G+ FVQDN S S G +RGLH Q+
Sbjct: 8 LKDCYIIEPTIFEDERGYFYEKFNEKKFEDLTGMNGHFVQDNISKS-SYGVLRGLHLQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLV C+ G+++D+AVD+R +SP++G W +E++A N LQ Y+P GFAHGF L
Sbjct: 67 EHAQAKLVSCLEGKVWDVAVDLREDSPSFGKWYGVELTAENKLQFYVPRGFAHGFAVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK +FY+ E + G+ W D + I W L +T + +SEKD+ + F
Sbjct: 127 MAVFAYKCDNFYNKESEGGILWNDADLAIDWKLDETDV-ILSEKDKVQLPFS--KKNF 181
>gi|218248087|ref|YP_002373458.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8801]
gi|218168565|gb|ACK67302.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8801]
Length = 176
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+N +++ ++ ED RG+F++++ K + GL VQ N SF+ GT+RG+H+Q
Sbjct: 7 KLNGAYLIELKRLEDERGFFARSWCQKEFLDYGLDANLVQCNISFNLKKGTLRGMHYQIA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY + KL+RC G I+D+ +D+ S ++ W+ +E+SA N L IYIP GFAHGF TLE
Sbjct: 67 PYEEVKLLRCTQGAIYDVIIDLNLESSSFKQWIGVELSAENRLMIYIPKGFAHGFQTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+TEV Y++++FY E GV W D + I WP+ D P +SEKD+
Sbjct: 127 HTEVFYQMSEFYHPECARGVRWNDPTFAIEWPIED---PIISEKDRQYEDFK 175
>gi|330815727|ref|YP_004359432.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia gladioli BSR3]
gi|327368120|gb|AEA59476.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia gladioli BSR3]
Length = 183
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V+I++ + F D+RG+F ++++ + E VFVQDNHS S G +RGLH+Q
Sbjct: 10 LSEVKIIEPKVFGDARGFFYESFNGREFAEKVDPQAVFVQDNHSRSAR-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR IAG + D+AVDIR++SP +G WV + +SA N Q+++P GFAHGF+TL
Sbjct: 68 EHAQGKLVRVIAGEVLDVAVDIRKSSPNFGKWVGVRLSAENARQLWVPPGFAHGFVTLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD++ E + + W D ++ I W + P ++ KD L Q D
Sbjct: 128 SAEFLYKTTDYWYPEFERSIVWNDPALGIDWQI--DFEPQLAAKDAAGSRLAQAD 180
>gi|325270260|ref|ZP_08136867.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella multiformis DSM
16608]
gi|324987561|gb|EGC19537.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella multiformis DSM
16608]
Length = 184
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 107/176 (60%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I+ V +++ + F D+RG+F +++ G F+QDN S S G +RGLH+Q+
Sbjct: 7 DIDGVWVIEPKVFNDARGYFFESFKQAEFDAHIGHHVEFIQDNESKS-GYGVLRGLHYQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++QAKLVR I GR+ D+AVDIR+NSPT+G +V +E+S +N Q +IP GFAHGF+ L
Sbjct: 66 GDFSQAKLVRVIKGRVVDVAVDIRKNSPTFGRYVMVELSEDNKRQFFIPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN-LPFLNQI 175
YKV + Y+ + ++ + W D +I I WP+ D +S+KD N L
Sbjct: 126 DEAIFTYKVDNVYAPQAEASIRWNDGTIGIEWPV-DAKDVVLSDKDLNKGVALKDA 180
>gi|298372513|ref|ZP_06982503.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroidetes oral taxon 274
str. F0058]
gi|298275417|gb|EFI16968.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroidetes oral taxon 274
str. F0058]
Length = 182
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ F DSRG+F++ Y+ + G+ + FVQDN S S G +RGLH Q+
Sbjct: 8 IKDLIVVCPDVFADSRGYFTELYNENRYRAYGIDNNFVQDNLSRSSY-GVVRGLHLQKGE 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQAKLV+ I G+++D+AVD+R+ S TYG W +E+S N LQ IP GFAHGF L
Sbjct: 67 SAQAKLVKVIVGKVWDVAVDLRQGSSTYGEWFGVELSDENHLQFLIPRGFAHGFSVLSPT 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
YK + Y + + G+ + D ++ I W + + VS+KD LP +Q
Sbjct: 127 AIFSYKCDNIYDKQAEGGIIYNDPTLAIDWKVPVGEM-IVSDKDLLLPTFDQ 177
>gi|317401446|gb|EFV82078.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Achromobacter xylosoxidans
C54]
Length = 184
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/177 (39%), Positives = 96/177 (54%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + V +++ D RG F +TY +L G + FVQDN S S +RGLH+Q
Sbjct: 6 LALPDVLLIEPEVHRDERGCFLETYRQSVLDAAVGRELRFVQDNQSESHR-NVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KL+R G I+D+AVD+R+ SPT+G WV+ +SA N Q++IP GFAHGF+ L
Sbjct: 65 TVD-PQGKLLRVTQGEIYDVAVDMRQGSPTFGQWVAQRLSAANHRQMWIPEGFAHGFLVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V YK T +Y H V W D + I WPL P +S D+N L + D
Sbjct: 124 SARAVVSYKATSYYQPMHQQCVLWNDPVLGIEWPL-GQEAPLLSAADRNGRLLAEAD 179
>gi|325922242|ref|ZP_08184027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas gardneri ATCC
19865]
gi|325547276|gb|EGD18345.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xanthomonas gardneri ATCC
19865]
Length = 193
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ + D+RGWF++ + ++ + + GL D FVQ N+SF+ GT+RG+H+Q PP
Sbjct: 8 LAGAFVIEPEQRGDARGWFARVFCTQEMAQAGLVDQFVQVNNSFNAQAGTLRGMHYQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+ K+VRCI G ++D VD+R +S TY W E++A N L +Y+P GFAHGF+TL+
Sbjct: 68 AAEVKIVRCIRGALWDAIVDLRPDSRTYLQWYGTELTAENRLALYVPRGFAHGFITLQPQ 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
TE Y Y+ + + G+ W D + + WPL VS+KD P N+
Sbjct: 128 TEAFYFANAMYTPQAERGLRWNDPRLGLQWPLEPQ---LVSDKDAAWPDFNE 176
>gi|254303462|ref|ZP_04970820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323654|gb|EDK88904.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 191
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 113/180 (62%), Gaps = 5/180 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ + FEDSRG F ++Y+ K++G+ ++FVQDNHS S G +RGLHFQ+
Sbjct: 8 EIENLFIIEPQIFEDSRGCFFESYNYNTFKKIGIDNIFVQDNHSKSLK-GVLRGLHFQKE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y+QAKL+ + G I DI VD+R+NS T+G + ++EI+ NN ++IP GFAHGF+TLE
Sbjct: 67 DYSQAKLISVLKGGILDIVVDLRKNSKTFGKYFAMEINENNKKMLFIPKGFAHGFLTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
TE+ YK +FY+ + + G+ W D+ ++I W D +SEKD+ +
Sbjct: 127 GTEIFYKCDNFYNPQSEGGIIWNDRDLNIDWNFKKYNIDKNELIISEKDKKNISFKEYKK 186
>gi|295133946|ref|YP_003584622.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Zunongwangia profunda SM-A87]
gi|294981961|gb|ADF52426.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Zunongwangia profunda SM-A87]
Length = 187
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
NIN + + DSRG+F +++++ +E GL FVQDN SFS + G +RGLH Q+
Sbjct: 7 NINGCFEINPKLIYDSRGYFYESFNAARFREKTGLNIQFVQDNQSFS-ERGVLRGLHLQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQAKLV + G++ D+A+D+R++S T+G +S N Q++IP G AHGF+ L
Sbjct: 66 GIHAQAKLVSVLKGKVLDVAIDLRKDSETFGEVYRTLLSEENKKQLFIPRGCAHGFVVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK ++Y ++G+ + D+ + I W L L +S+KD LP S +
Sbjct: 126 ETCLFFYKCDNYYHKASEAGIIYDDEDLGIDWQLAKDEL-IISDKDLVLPSFKDYISEY 183
>gi|225376959|ref|ZP_03754180.1| hypothetical protein ROSEINA2194_02601 [Roseburia inulinivorans DSM
16841]
gi|225211280|gb|EEG93634.1| hypothetical protein ROSEINA2194_02601 [Roseburia inulinivorans DSM
16841]
Length = 190
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++++ F D+RG+F +TY+ KE G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IAGLKVIEPTVFGDARGYFMETYNYNDFKEAGIDCEFVQDNQSAS-KKGVLRGLHFQ-IN 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R S T+G W + +SA N Q +IP GFAHGF+ L
Sbjct: 71 YPQDKLVRVVNGEVFDVAVDLREGSETFGKWFGVTLSAENKKQFFIPKGFAHGFIVLSDY 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQ 174
E YKVTDFY + G+ W+D I + WP+ + ++S+KD+ +++
Sbjct: 131 AEFCYKVTDFYHPNDEGGLLWKDPEIGVEWPMPEGMTEADLTLSDKDKVWSGISE 185
>gi|312194700|ref|YP_004014761.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EuI1c]
gi|311226036|gb|ADP78891.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EuI1c]
Length = 205
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + R+ DSRG F + + + L++ G Q NHS S GT+RG+H+
Sbjct: 6 LSVPDAWVFTPRQHTDSRGTFLEWFRADALEKALGHPLGLAQGNHSISRA-GTLRGVHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C++GR+ D +DIR SPT+G W ++++ + IY+ G H F+ L
Sbjct: 65 DVPPSQAKYVTCVSGRVLDCVIDIRVGSPTFGQWAAVQLDDVDRKGIYLAEGLGHAFIAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+V Y + Y+ + G+ D + + WP + P +S+KD P L + +
Sbjct: 125 TDGAQVSYLCSTPYTPGRERGINPLDPDLGLPWP--ADLTPLLSDKDAVAPTLKEAE 179
>gi|86742619|ref|YP_483019.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. CcI3]
gi|86569481|gb|ABD13290.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. CcI3]
Length = 209
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I+ F D+RG F++T+ + GL Q + +++ GT+RG+H+ P
Sbjct: 8 IAGVMIVDVEPFPDARGMFARTFCADEFAAAGLTVDVAQCSVAYNASAGTVRGMHWAGEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ KLVRC G + D+ VD R +SPTY V++E+SA+N ++I G AHG+ TL +
Sbjct: 68 VRETKLVRCTRGALLDVVVDPRPDSPTYLRHVAVELSADNHRALFIDAGLAHGYQTLVDS 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN-QIDSPFEY 181
TE Y++ ++ HD G+ + D + I WPL + +S+KD+ P L +
Sbjct: 128 TEATYQMNVPFTPGHDRGLRFDDPRLGIVWPLP---VSVISDKDRAWPLLAGDGPAGPSG 184
Query: 182 DGLPLLSLNMERDL 195
D P ++RD+
Sbjct: 185 DAAPPGPPGIQRDV 198
>gi|313124556|ref|YP_004034815.1| dtdp-4-keto-6-deoxy-d-glucose 3,5-epimerase rmlc [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281119|gb|ADQ61838.1| Putative dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 202
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +TY+ +KE G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPAVHGDDRGYFMETYNENDMKEAGFDINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 FPQCKLVRAVRGDVFDVAVDLRSDSKTYGKWYGVELTAENKKQFLIPEGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S++D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPKLVGEYPGSADASGYSLEDGTKLTLSDRD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QKWAGLKD---TFKF 202
>gi|167461276|ref|ZP_02326365.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 179
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++ K ED RG+F++T+ + + GL F+Q N S++ GTIRG+H+Q PP
Sbjct: 8 LEGAYLIGLEKHEDERGFFTRTFCANEFEARGLMPQFIQCNLSYNRKRGTIRGMHYQHPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y +AKLV+CI G ++D+ +D+R S TY ++ ++ N+G +YIP GFAHGF TL+
Sbjct: 68 YGEAKLVQCIRGELYDVIIDLRPLSKTYRQTFAVHLAGNSGTMLYIPEGFAHGFQTLQDE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
TEV+Y ++ Y E +G+ W D S I WPL +SE+D++ P +
Sbjct: 128 TEVLYYMSSPYKPEAAAGIRWNDPSFSIVWPLDVK---IISERDRHYPDYREF 177
>gi|291525903|emb|CBK91490.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium rectale DSM
17629]
Length = 202
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 113/195 (57%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ D+RG+F +TY+S ++E G+ VFVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCIIEPTVHGDNRGYFMETYNSNDMQEAGIDRVFVQDNQSCS-TKGVLRGLHFQ-KE 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y QAKLVR + G +FD+AVD+R +S TYG W +E++ N Q IP GFAHGF+ L
Sbjct: 71 YPQAKLVRAVKGSVFDVAVDLRSDSKTYGKWFGVELTEENKKQFLIPEGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKVTDF+ + +SG+AW D +I I WP L D ++S+KD
Sbjct: 131 AEFCYKVTDFWHLGDESGLAWNDPAIGIEWPQLVGEYPGSADGSGYTLEDGTPINLSDKD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L ++ F++
Sbjct: 191 QKWETL---ENTFKF 202
>gi|240167774|ref|ZP_04746433.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium
kansasii ATCC 12478]
Length = 202
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + DSRG F + + + G + Q N S S G +RGLHF
Sbjct: 6 LDIPGAWEITPTIHGDSRGLFFEWLTERGFSAFAGHRLDVRQANCSVSAA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C++G +FD+ VDIR SPT+G W ++ + + +YI G AHGF+ L
Sbjct: 65 ELPPSQAKYVTCVSGSVFDVVVDIRLGSPTFGRWDAVVLDDVDRRSVYISEGLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ I WPL+D + S+S++D P L ++
Sbjct: 125 QDNSTVMYLCSAEYNPQREHTICATDPTLAIDWPLVDGVAASLSDRDAAAPSLQEV 180
>gi|303237108|ref|ZP_07323678.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella disiens
FB035-09AN]
gi|302482495|gb|EFL45520.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella disiens
FB035-09AN]
Length = 182
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 105/176 (59%), Gaps = 3/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
NI V I++ + F D+RG+F + + K +G FVQDN S S G +RGLH+Q+
Sbjct: 7 NIEGVWIMEPKVFNDNRGYFYEVWKQSDFDKNIGKHVEFVQDNESKS-TFGVLRGLHYQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Y+QAKLVR + G++ D+AVD+R++SPT G +V E+S N Q +IP GFAHGF+ L
Sbjct: 66 GEYSQAKLVRVLKGKVLDVAVDLRKDSPTLGKYVMAELSDENKRQFFIPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YKV + Y+ + ++G+ W D++I I WP+ D SEKD + +
Sbjct: 126 DEAIFTYKVDNVYAPQSEAGIRWDDETIGIEWPI-DMNKVITSEKDNHAAAWKDAE 180
>gi|257440395|ref|ZP_05616150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Faecalibacterium prausnitzii
A2-165]
gi|257197144|gb|EEU95428.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Faecalibacterium prausnitzii
A2-165]
Length = 188
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 66/178 (37%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ + F D RG+F +TY G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIPGVVVIEPQVFGDDRGYFMETYQKDQFAAAGIDKEFVQDNQSRS-TRGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G ++D+AVD R +S T+G WV + +S N YIP GFAHGF+ L
Sbjct: 68 NHTQGKLVRVTKGEVYDVAVDCRPHSATFGKWVGVTLSEENKKMFYIPEGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK TD Y + G+ + D ++++ WP S KD+ F
Sbjct: 128 VAEFCYKCTDVYDPTSEGGIPYDDPTVNVQWP-DCGCEHKTSAKDKLHEPFAAQKFEF 184
>gi|315654769|ref|ZP_07907674.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC
51333]
gi|315490730|gb|EFU80350.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC
51333]
Length = 205
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++F D RG F + Y E +G VQ N S S G +RG+HF
Sbjct: 6 LKIAGAWEITPKQFPDERGAFMEMYKMGEFAEVVGHPLNLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGQWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E N+ V+Y ++ Y+ H+ GV+ D + + WP D + +SEKD P L +
Sbjct: 125 EDNSTVVYLCSEGYNPGHEHGVSPVDPEVALKWPDHDLAGRPLEVILSEKDTAAPSLTEA 184
>gi|289642891|ref|ZP_06475026.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia symbiont of Datisca
glomerata]
gi|289507274|gb|EFD28238.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia symbiont of Datisca
glomerata]
Length = 216
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKL-LKELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + R+ D RG F + + S+ ++ +G Q NHS S GT+RG+H+
Sbjct: 17 LEIAGAWVFTPRQHTDDRGTFLEWFRSETVVEAVGHPLHLAQANHSVS-RRGTLRGIHYA 75
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C+ GR+ D VDIR SPTYG ++ + + +Y+ G H FM L
Sbjct: 76 AVPPSQAKYVTCVHGRVLDCVVDIRLGSPTYGTHQAVLLDDVDRKGLYLAEGLGHSFMAL 135
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
N + Y + YS + G+ D + + WP + P +SEKD P L + +
Sbjct: 136 TDNAAISYICSTPYSPAREYGIDPLDPDLTLPWP--RDVAPLLSEKDARAPSLKEAE 190
>gi|303233353|ref|ZP_07320022.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium vaginae PB189-T1-4]
gi|302480482|gb|EFL43573.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium vaginae PB189-T1-4]
Length = 205
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I+ T+++ D+RG+F +TY G+ FVQDN S S G +RGLHFQ
Sbjct: 22 SIRDVIIVDTKQYGDARGYFMETYKESDFAAGGISTTFVQDNQS-SSTKGVLRGLHFQI- 79
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ QAKLVR + G +FD+AVD+R S T+G W +E+SA N Q +IP GFAHGF L
Sbjct: 80 EHPQAKLVRVVRGCVFDVAVDLRAGSDTFGMWEGVELSAENHRQFFIPRGFAHGFFVLSD 139
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL------DTILPSVSEKDQNLPFLN 173
E YK D Y + G+ W D + I+WP +S+KD +
Sbjct: 140 EAEFCYKCDDVYHPGDEGGLMWNDPDLAISWPAPCGCDRFSPSQVILSDKDTHHESFA 197
>gi|84386903|ref|ZP_00989927.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio splendidus
12B01]
gi|84378193|gb|EAP95052.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Vibrio splendidus
12B01]
Length = 181
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 75/172 (43%), Positives = 101/172 (58%), Gaps = 6/172 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ F D RG+F +T++ K + L G FVQDNHS S G +RGLH+Q
Sbjct: 8 ITDVKIIEPSVFGDERGFFMETWNQKQFEGLVTGKPTQFVQDNHSKS-KKGILRGLHYQT 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR ++G +FD+AVDIR SPT+G WV +SA N Q+++P GFAHGF
Sbjct: 67 ENT-QGKLVRVVSGEVFDVAVDIREGSPTFGQWVGEYLSAENKRQLWVPEGFAHGFYVTS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E +YK TD+Y+ + + W DK I I WPLL +S+KD L
Sbjct: 126 EEAEFVYKCTDYYNPNAEVSICWSDKDIGIEWPLLGEAF--LSKKDSEGIAL 175
>gi|291543267|emb|CBL16376.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus sp. 18P13]
Length = 202
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 103/195 (52%), Gaps = 20/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ DSRG+F +TY+ ++E GL FVQDN S S G +RGLHFQ
Sbjct: 13 IQGLCIIQPAVHGDSRGYFMETYNQNDMQEAGLDIAFVQDNQSCSTK-GVLRGLHFQ-KQ 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVD+R NS TYG W +E++A N Q IP GFAHGF+
Sbjct: 71 FPQTKLVRVIRGSVFDVAVDLRSNSATYGKWFGVELTAENKKQFLIPKGFAHGFLVRSEI 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP---------------LLDTILPSVSEKDQ 167
E YK DFY + G+AW D +I I W L D +SEKDQ
Sbjct: 131 AEFCYKCDDFYHPGDEGGLAWNDPAIGIDWGVTGTYPGSASGSGYTLPDGTGLMLSEKDQ 190
Query: 168 NLPFLNQIDSPFEYD 182
+ F+++
Sbjct: 191 LWLGIQD---TFKFN 202
>gi|113867830|ref|YP_726319.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia eutropha H16]
gi|113526606|emb|CAJ92951.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia eutropha H16]
Length = 183
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 66/169 (39%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I++ + F D RG+F ++++ +L +E G++ FVQDNHS S +RGLH+Q
Sbjct: 9 DIPEVLIIEPKVFGDDRGFFYESFNGRLFEEATGVKRTFVQDNHSRSTR-NVLRGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+ Q KLVR + G++FD AVD+R +SP +G WV + +SA N ++++P GFAHGF+ +
Sbjct: 68 -KHPQGKLVRVVVGQVFDAAVDLRMSSPNFGKWVGVMLSAENKRELWVPEGFAHGFVVIS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
E +YK TD++ EH+ + W D + I WP+ P ++ KD
Sbjct: 127 EYAEFLYKTTDYWYPEHERSLLWNDTRVGIDWPIHGE--PVLAAKDAAA 173
>gi|330446536|ref|ZP_08310188.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490727|dbj|GAA04685.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 180
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ + D RG++S+ YS + L + G+ VQDNH S GT+R +HFQ
Sbjct: 7 ELDGVLIIEPKIHRDDRGYYSEIYSERSLSDKGISFRAVQDNHIKSKK-GTLRAIHFQNN 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQAKLVRC G++ D VD+R++SPT+ W+ +E++ N LQ+ IP+GF HG + LE
Sbjct: 66 PKAQAKLVRCTKGKVHDFIVDLRKDSPTFKKWIMVELNTENNLQVLIPSGFGHGVLALED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+TEV+YKV + Y EHD + W D ++I W + P +SEKD+ P+L D +
Sbjct: 126 DTEVMYKVDELYYPEHDRAIFWADPELNIEWGIE---SPLLSEKDKTAPYLKDSDVNY 180
>gi|170019636|ref|YP_001724590.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli ATCC 8739]
gi|169754564|gb|ACA77263.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli ATCC 8739]
Length = 177
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 75/172 (43%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + +KFEDSRG+F ++++ +L ++ G + +FVQDN S+S +RGLH+Q
Sbjct: 7 EIPEVLIFEPKKFEDSRGYFFESFNQRLFEDAVGKEILFVQDNQSYS-SKNVLRGLHYQS 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRCI G +FD+AVDIR+ S +YG WV + +S +N Q++IP GFAHGF+
Sbjct: 66 EPYAQGKLVRCIMGEVFDVAVDIRKESESYGQWVGVFLSEDNNRQLWIPEGFAHGFLVKS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
YK T+FY+ ++ + W + I WPL D L +SEKD
Sbjct: 126 DKAIFAYKCTNFYNPSAENTIRWDSPDLAIEWPLDDEDL-LISEKDLLGRKF 176
>gi|149369374|ref|ZP_01889226.1| dTDP-4-dehydrorhamnose 3,5-epimerase [unidentified eubacterium
SCB49]
gi|149356801|gb|EDM45356.1| dTDP-4-dehydrorhamnose 3,5-epimerase [unidentified eubacterium
SCB49]
Length = 182
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +L+ FED RG F +T++ K E+ GL+ FVQDN S S G +RGLH+Q+
Sbjct: 8 LKDCFVLQPNVFEDERGIFIETFNEKTFNEITGLKTAFVQDNQSRS-TRGVLRGLHYQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ+KLVR GR+ DI VD+R++SPT+G S+ + Q+++P GFAHGF+TL
Sbjct: 67 DFAQSKLVRVAKGRVLDIVVDLRKDSPTFGQHFSIILDDLTHQQLFVPRGFAHGFITLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK + Y E + G+ + D ++ + W L L VSEKD+ LP +
Sbjct: 127 TSVFAYKCDNLYHKEAEGGIIYNDATLQLDWHLPQEEL-IVSEKDKALPSFEKA 179
>gi|307340809|gb|ADN43869.1| RmlC [Escherichia coli]
Length = 180
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I V I + + F D RG+F ++++ K+ +E + FVQDNHS S G +RGLH+Q
Sbjct: 7 DIPDVLIFEPKVFYDERGFFFESFNQKVFEEAVAHKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFITLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +YK T FYS +H+ + + D++I I WP T +S KD+ N
Sbjct: 126 DIAEFLYKTTSFYSPKHEVCIRFNDENIGIHWP-NITDNTLISPKDKKGLNFN 177
>gi|188991707|ref|YP_001903717.1| NDP-hexulose epimerase [Xanthomonas campestris pv. campestris str.
B100]
gi|167733467|emb|CAP51668.1| NDP-hexulose epimerase [Xanthomonas campestris pv. campestris]
Length = 193
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ I++ D+RGWF++ + ++ + + GL D FVQ N+SF+ + GT+RG+H+Q PP
Sbjct: 8 LSGAFIIEPEPRGDARGWFARVFCTQEMAQAGLVDQFVQVNNSFNAEAGTLRGMHYQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ K+VRCI G ++D VD+R +SPTY W +E+SA+N L +Y+P GFAHGF+TL+
Sbjct: 68 APEVKIVRCIRGALWDAIVDLRPDSPTYLQWYGVELSADNRLALYVPRGFAHGFITLQAQ 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
TE +Y + Y+ + G+ W D I I WP +S+KD P N+
Sbjct: 128 TEALYFASAMYTPAAERGLRWDDARIGIRWPCTP---ALLSDKDAAWPEFNE 176
>gi|237737858|ref|ZP_04568339.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC
9817]
gi|229419738|gb|EEO34785.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC
9817]
Length = 470
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 75/190 (39%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++++K + F+D RG+F + ++ + K+LG+ + FVQDNHS S G +RGLHFQ
Sbjct: 11 FDEIKLIKPKIFQDERGFFLEFFNYEEFKKLGIDERFVQDNHSKSKR-GVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G I+DI VDIR+ S T+G W +E+++ + +YIP GFAHGF+TLE +
Sbjct: 69 HPQGKLVRVIKGAIYDIIVDIRKGSSTFGKWFGVELNSYDKKMLYIPKGFAHGFLTLEDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT--ILPSVSEKDQNLPFLNQIDSPFE 180
TE+ YK DFY +++SG+ + DK +++ W L + ++SEKD+ + ++
Sbjct: 129 TEIEYKCNDFYYPQYESGIMYDDKDLNVDWKLEEYRITELTLSEKDKKHQSFKEYTERYQ 188
Query: 181 YDGLPLLSLN 190
D + L N
Sbjct: 189 GDYVLLTGAN 198
>gi|219849033|ref|YP_002463466.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroflexus aggregans DSM
9485]
gi|219543292|gb|ACL25030.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroflexus aggregans DSM
9485]
Length = 176
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 74/172 (43%), Positives = 109/172 (63%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ ED+RG+F++ ++ E GL D VQ N S++ GT+RG+HFQ
Sbjct: 7 ELKDAHIIELEPREDNRGFFARVWAKDEFAEHGLVDRVVQMNLSYNRLAGTLRGMHFQHA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYA+ KLVRCI G I+D+ +D+R +SPTY W+ + ++A N L +Y+P GFAHGF TLE
Sbjct: 67 PYAETKLVRCIRGAIYDVIIDLRPDSPTYKRWIGVTLTAANRLALYVPEGFAHGFQTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+TEV Y+V+ +Y+ + GV + D + I WPL T +SEKD+ P N
Sbjct: 127 DTEVFYQVSQYYTPSAEGGVRYDDPAFGIEWPLPVTE---MSEKDKRWPLFN 175
>gi|312797097|ref|YP_004030019.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia rhizoxinica HKI
454]
gi|303399367|emb|CBK52867.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia rhizoxinica HKI
454]
gi|312168872|emb|CBW75875.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia rhizoxinica HKI
454]
Length = 183
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 112/176 (63%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V++++ + F+D+RG+ ++++++ L VFVQDNHS S G +RGLH+Q
Sbjct: 9 SLPDVKLIEPQVFDDARGFLFESFNARDFARLVDANAVFVQDNHSRSAK-GVLRGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AQ KLVR + G +FD+AVDIRR+SP +G WV + +SA N Q+++P GFAHGF+TL
Sbjct: 68 -EHAQGKLVRVVHGEVFDVAVDIRRSSPHFGQWVGVYLSAANRRQLWVPPGFAHGFLTLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ E +YK TD++ E + + W D + I WPL P V+ KD L++ +
Sbjct: 127 DSAEFLYKTTDYWFPEFERSILWNDPELGIEWPLQGD--PVVAAKDAGGKQLSEAE 180
>gi|93115472|gb|ABE98432.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli]
Length = 177
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 75/171 (43%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I + +KFEDSRG+F ++++ +L ++ G + +FVQDN S+S +RGLH+Q
Sbjct: 8 IPEVLIFEPKKFEDSRGYFFESFNQRLFEDAVGKETLFVQDNQSYS-SKNVLRGLHYQSE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYAQ KLVRCI G +FD+AVDIR+ S +YG WV + +S +N Q++IP GFAHGF+
Sbjct: 67 PYAQGKLVRCIMGEVFDVAVDIRKESESYGQWVGVFLSEDNNRQLWIPEGFAHGFLVKSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
YK T+FY+ ++ + W + I WPL D L +SEKD
Sbjct: 127 KAIFAYKCTNFYNPSAENTIRWDSPDLAIEWPLDDEDL-LISEKDLLGRKF 176
>gi|799235|gb|AAC63615.1| RmlC [Escherichia coli]
Length = 183
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 66/177 (37%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G IRGLHFQ
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-TKGVIRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLE--ISANNGLQIYIPTGFAHGFMT 118
PPY+QAKLVRC+ G ++D+ VDIR++S T+G WV L + N +HGF
Sbjct: 66 PPYSQAKLVRCVVGEVYDVVVDIRKDSKTFGKWVRLVNLSAENKRQLWIPEGFGSHGFEV 125
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ +YK ++Y+ + G+ W D+ + I W +SEKD P ++
Sbjct: 126 ISEVASFLYKTNNYYNATMEKGIRWDDEYLAINW---KEKKAIISEKDMKQPSFREL 179
>gi|296168674|ref|ZP_06850423.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896583|gb|EFG76224.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 203
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + DSRG F + + E G + Q N S S G +RGLHF
Sbjct: 7 LAIPGAWEITPTIHGDSRGLFFEWLTDHGFTEFAGHRLDVRQANCSVS-SAGVLRGLHFA 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 66 QLPPSQAKYVTCVRGSVFDVVVDIREGSPTFGQWDSVLLDDKDRRTIYLSEGLAHGFLAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ ++ V+Y + Y+ + + + D +I + WPL++ P++S++D P ++
Sbjct: 126 QDDSTVMYLCSAEYNPQRERTICATDPAIGVDWPLVNGAAPTLSDRDAAAPMFEEV 181
>gi|300313694|ref|YP_003777786.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Herbaspirillum seropedicae
SmR1]
gi|226726337|gb|ACO81758.1| RfbC [Herbaspirillum seropedicae SmR1]
gi|300076479|gb|ADJ65878.1| dTDP-6-deoxy-D-glucose-3,5 epimerase protein [Herbaspirillum
seropedicae SmR1]
Length = 181
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +L+ FED+RG F + ++++ K L GL FVQDN S S G +RGLH+Q
Sbjct: 8 LPGVLVLEPTVFEDARGHFFEAFNARQFKALTGLSPEFVQDNQSHSKA-GVLRGLHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR I G I D+ VD+RR SP++G W S+ +SA N Q++IP GFAHGF
Sbjct: 66 HQPQGKLVRVIQGEITDVVVDLRRQSPSFGQWASVTLSAQNRRQLWIPEGFAHGFHVRSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+V YK T ++S + + W D + I W L T P +S+KD+ + Q +
Sbjct: 126 IADVQYKTTAYWSAPDERCIRWDDPDLAIDWQL--TAPPLLSDKDRQGVYWRQAE 178
>gi|163846788|ref|YP_001634832.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroflexus aurantiacus
J-10-fl]
gi|222524606|ref|YP_002569077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroflexus sp. Y-400-fl]
gi|163668077|gb|ABY34443.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroflexus aurantiacus
J-10-fl]
gi|222448485|gb|ACM52751.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chloroflexus sp. Y-400-fl]
Length = 176
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 73/171 (42%), Positives = 109/171 (63%), Gaps = 3/171 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ ED+RG+F++ ++ E GL D VQ N S++ GT+RG+HFQ
Sbjct: 7 ELKDAHIIELEPREDNRGFFARVWAKDEFAEHGLVDRVVQMNLSYNRVAGTLRGMHFQHA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYA+ KLVRCI G I+D+ +D+R +SPTY W+ ++++A N L +Y+P GFAHGF TLE
Sbjct: 67 PYAETKLVRCIRGAIYDVIIDLRPDSPTYKRWIGVKLTAANRLALYVPEGFAHGFQTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+TEV Y+V+ +Y+ + GV + D + I WPL T +SEKD+ P
Sbjct: 127 DTEVFYQVSQYYTPSAEGGVRYDDPAFGIEWPLPVTE---MSEKDKRWPLF 174
>gi|209883772|ref|YP_002287629.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oligotropha carboxidovorans
OM5]
gi|209871968|gb|ACI91764.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oligotropha carboxidovorans
OM5]
Length = 188
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 67/171 (39%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++ K D RG+F++ + + + GL+ FVQ N+S + GT+RGLH+Q PP
Sbjct: 8 LRGACTIELEKRGDDRGFFARMFCEREFADAGLETRFVQVNNSLTAKRGTLRGLHYQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+ K+VRC+ G ++D+ VD+R +SPT+ W E++A+N +Y+P GFAH F+TL +
Sbjct: 68 AAEVKVVRCVRGALYDVIVDLRPDSPTFRKWFGAELTADNRTMMYVPRGFAHAFLTLTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +Y V+ FYS E++ GV + D + I WP+ VS+KD+N P N
Sbjct: 128 AEAMYLVSAFYSPENERGVRYNDPAFSIAWPVDP---LEVSDKDRNWPDFN 175
>gi|319788849|ref|YP_004090164.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus albus 7]
gi|315450716|gb|ADU24278.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus albus 7]
Length = 194
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ D+RG+F +TY+ K ++ GL FVQDN S S G +RGLH+Q
Sbjct: 13 IEGLCVIEPAVHGDNRGYFMETYNQKDMEAEGLNYTFVQDNQS-SSTKGVLRGLHYQF-N 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVD+R+ S T+G W ++++ N Q IP FAHGF+ L
Sbjct: 71 HPQDKLVRVIRGEVFDVAVDLRKGSKTFGKWFGIKLTEENKKQFLIPKNFAHGFIVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQ 174
E YKVTDF+ + G+ W D +I I W + + ++SEKD N+
Sbjct: 131 AEFCYKVTDFWYPNDEGGLMWNDPTIGIEWEMPEGMTDADLNLSEKDTKNLSFNE 185
>gi|332971548|gb|EGK10498.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Kingella kingae ATCC 23330]
Length = 187
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I +++L+ + + D RG+F +T+ ++ FVQ+NHS S +RGLH+Q
Sbjct: 14 SILDIKLLEPQIWRDERGFFMETFRDDWFRQHVADCAFVQENHSQSSK-NVLRGLHYQ-T 71
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR +AG IFD+AVD+RR+SPT+G WV+ +S +N Q++IP GFAHGF L
Sbjct: 72 ENAQGKLVRAVAGCIFDVAVDLRRSSPTFGQWVAEILSGDNARQMWIPGGFAHGFYVLSD 131
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V YK TD+Y+ + + W D ++ I W L P +S KDQ L +
Sbjct: 132 GAAVAYKCTDYYNPSAEHTLLWNDPAVSIDWRL--NGKPVLSPKDQAGKRLADL 183
>gi|186681547|ref|YP_001864743.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc punctiforme PCC 73102]
gi|186463999|gb|ACC79800.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nostoc punctiforme PCC 73102]
Length = 184
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I+ + D RG+F++++ ++ + GL+ Q N SF++ GTIRG+H+Q P
Sbjct: 8 LKDAFIIDLEEKPDHRGFFARSFCAQEFEAHGLKPTVAQCNLSFNYKKGTIRGMHYQILP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+ KL+RC G I+D+ +D+R SP++ + +E++ N +Y+P FAHG+ L
Sbjct: 68 AAETKLIRCTKGAIYDVIIDMRPESPSFLSHIGVELTPENRRALYVPEMFAHGYQALTDE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
TEV+Y+V +FY+ ++ G+ + D I WPL T +SEKD N P L
Sbjct: 128 TEVVYQVGEFYTPGYERGLRYDDPFFAIDWPLDVTE---ISEKDLNWPLLR 175
>gi|77920189|ref|YP_358004.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter carbinolicus DSM
2380]
gi|77546272|gb|ABA89834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter carbinolicus DSM
2380]
Length = 168
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 75/169 (44%), Positives = 107/169 (63%), Gaps = 5/169 (2%)
Query: 9 LKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAK 67
++ + F D RG+F ++++ K + GL FVQDNHS S G +RGLH+Q K
Sbjct: 2 IEPKIFGDQRGFFFESFNQKQWQNTTGLSTRFVQDNHSRSAR-GVLRGLHYQIEQVQA-K 59
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
LVR I G +FD+AVDIRR+SPT+G WV + +SA N Q++IP GFAHGF+ L E +Y
Sbjct: 60 LVRVIVGEVFDVAVDIRRHSPTFGKWVGVRLSAENKRQLWIPEGFAHGFLVLSEVAEFLY 119
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
K TD+Y+ EH+ + W D + I WP + P++SEKD+ LN+ +
Sbjct: 120 KTTDYYAPEHERAIIWNDPDLAIHWPTDEE--PTLSEKDKRALPLNEAE 166
>gi|91202740|emb|CAJ72379.1| strongly sinmilar to dTDP-4-deoxyrhamnose 3,5 epimerase [Candidatus
Kuenenia stuttgartiensis]
Length = 187
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V ++K + F D RG+F +T+ E+G+ FVQDNHS+S T+RGLH+Q
Sbjct: 10 LPEVVLIKPQVFRDDRGFFLETFHKNKYAEVGISGNFVQDNHSYS-KKNTLRGLHYQ-LL 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLV I+G IFD+AVDIRR SP++G W + +SA N Q+YIP GFAHGF+ L
Sbjct: 68 HPQGKLVYVISGEIFDVAVDIRRGSPSFGKWTGVHLSAENKYQLYIPEGFAHGFLVLSET 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+V+YK T+ Y+ + D G+ W D +I+ITW + P +S+KDQ L I
Sbjct: 128 ADVLYKCTEIYTPDDDYGILWSDPAINITW---QSSSPILSKKDQEYQTLKNIP 178
>gi|149925740|ref|ZP_01914004.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Limnobacter sp. MED105]
gi|149825857|gb|EDM85065.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Limnobacter sp. MED105]
Length = 185
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + +L + D+RG F +++++K K+ G+Q FVQ N S S G +RGLH+Q
Sbjct: 10 LQGLLLLTPTVYTDARGHFFESFNAKTFKQVAGIQPEFVQTNESLSKR-GVLRGLHWQTA 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLVR + G +FD+AVD+R NS T+G W E+S N +Q++IP GFAHGF+TL
Sbjct: 69 PKAQGKLVRVVHGAVFDVAVDLRENSETFGQWYGCELSDINHVQLWIPPGFAHGFLTLTD 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFL 172
Y+VT+ +S EH+ +AW D ++I WPL P++S KD+
Sbjct: 129 TAITSYQVTEHHSPEHEHCMAWNDPVLNIEWPLRRAGVATPTLSPKDEQGVAF 181
>gi|227874476|ref|ZP_03992651.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oribacterium sinus F0268]
gi|227839665|gb|EEJ50120.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oribacterium sinus F0268]
Length = 246
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 104/189 (55%), Gaps = 18/189 (9%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + I+ +DSRG+F ++Y+ + +E GL FVQDN S S G +RGLHFQ
Sbjct: 56 DIEGLCIITPTIHQDSRGYFMESYNERDFQEQGLNLRFVQDNQSMSVK-GVLRGLHFQ-K 113
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y Q KLVR + GR++D+AVD+R+NS TYG + +S N YIP GFAHGF+ L
Sbjct: 114 QYPQGKLVRVLKGRVYDVAVDLRKNSKTYGKHFGITLSEENKKMFYIPEGFAHGFLVLSD 173
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEK 165
E YKVTDFY + G+AW D SI I WP + D +SEK
Sbjct: 174 TAEFAYKVTDFYHPGDEGGLAWNDPSIGIRWPELKGTYAGNAKKDGYTMEDGSPLLLSEK 233
Query: 166 DQNLPFLNQ 174
D+ L +
Sbjct: 234 DELWLPLAE 242
>gi|282891818|ref|ZP_06300298.1| hypothetical protein pah_c198o003 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498251|gb|EFB40590.1| hypothetical protein pah_c198o003 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 185
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++ K D RG+F++ + K + GL+ VQ N+S+S + GT+RGLH+Q PP
Sbjct: 8 LKDAFLIDLNKLGDERGFFARLFCQKEFTQQGLEPAVVQVNNSYSVEKGTLRGLHYQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + KLVRCI G ++D+ VD+R +SPT+ +SA N L +Y+P GFAHGFMTL+ N
Sbjct: 68 FEETKLVRCIQGSLYDVIVDLRVDSPTFKKSFGAVLSAENRLMMYVPKGFAHGFMTLQPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+E++Y V+ FYS E + GV W D + I WP+ + +SE+D+ P +
Sbjct: 128 SEIMYFVSQFYSKECERGVRWDDPTFSIEWPVKPS---LISERDKMHPNFD 175
>gi|298353050|gb|ADI77028.1| RmlC [Escherichia coli]
Length = 182
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 112/176 (63%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++ F DSRG+F ++++ + + + + VF QDN S S G +RGLHFQ
Sbjct: 8 IQDAIVITPEVFADSRGYFFESFNYRDFQRIINREIVFCQDNQSLSHK-GVVRGLHFQVN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QAKLVRCI G ++D+ VD+R+NSP+Y CW + +S++N Q++IP G AHGF++LE
Sbjct: 67 PKEQAKLVRCINGSVYDVIVDLRKNSPSYKCWFGILLSSDNKKQLWIPEGCAHGFISLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
NTE++YK T+FYS +H+ + W D + I+WP +S+KD+N + +S
Sbjct: 127 NTELLYKTTEFYSPDHERCIIWNDPDLGISWP---EYSYIISDKDKNGISFAEWES 179
>gi|255524619|ref|ZP_05391572.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium carboxidivorans
P7]
gi|255511643|gb|EET87930.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium carboxidivorans
P7]
Length = 181
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V I+ F D RG+F +TY+ K +GL VFVQDN S S G +RGLHFQ
Sbjct: 10 EIDGVYIIDVEIFSDKRGYFIETYNYDDFKSVGLDMVFVQDNQS-SSKKGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR I G +FD+AVDIR+NS T+G WV + +S N Q YIP GFAHGF+ L
Sbjct: 68 THPQGKLVRVIKGEVFDVAVDIRKNSKTFGKWVGVTLSEGNKRQFYIPQGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+E+ YK TDFY E + G+AW D I I WP+ +S+KD N ++I
Sbjct: 128 ESEICYKCTDFYHSEDEGGIAWDDPEIGIEWPMEGIDEIILSDKDGNRENFSKI 181
>gi|257060586|ref|YP_003138474.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8802]
gi|256590752|gb|ACV01639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanothece sp. PCC 8802]
Length = 176
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+N +++ ++ ED RG+F++++ K + GL VQ N SF+ GT+RG+H+Q
Sbjct: 7 KLNGAYLIELKRLEDERGFFARSWCQKEFLDYGLDANLVQCNISFNLKKGTLRGMHYQIA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY + KL+RC G I+D+ +D+ NS ++ W+ +E+SA N L IYIP GFAHGF TLE
Sbjct: 67 PYEEVKLLRCTQGAIYDVIIDLNPNSSSFKQWIGVELSAENRLMIYIPKGFAHGFQTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+TEV Y++++FY E GV W D + I WP+ D+ +SEKD+
Sbjct: 127 HTEVFYQMSEFYHPECARGVRWNDPTFAIEWPIEDS---IISEKDRQYEDFK 175
>gi|167627477|ref|YP_001677977.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167597478|gb|ABZ87476.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 190
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL-LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
IN + I + D RG+F +T+ LG + F QDN S S G +RGLH+Q
Sbjct: 8 INDIIICEPTVHSDDRGYFVETFRQDKLFDFLGYKINFCQDNESKS-SYGVLRGLHYQLA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLVR I GR+ D+AVDIR+ SPT+G +V++E+SA N QI IP GFAHGF+ LE
Sbjct: 67 PHAQTKLVRVIQGRVLDVAVDIRKGSPTFGQYVAVELSAENKKQILIPRGFAHGFVVLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+T YKV +YS E D G+A+ DKSI I W + +L +S KD+ P L+ FEY
Sbjct: 127 DTVFAYKVDSYYSPECDRGIAFDDKSIAIDWQVPVDML-KLSAKDRGQPKLDDTVDLFEY 185
>gi|88800557|ref|ZP_01116119.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Reinekea sp. MED297]
gi|88776702|gb|EAR07915.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Reinekea sp. MED297]
Length = 185
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 96/174 (55%), Gaps = 3/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V +L + D RG+F +T+ +E FVQDNHS S G +RGLH+Q
Sbjct: 7 SIPDVVLLTPEVYGDERGFFMETFRQSEFEEHCGNYQFVQDNHSKS-KKGILRGLHYQ-L 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR G +FD+AVD+R++SPT+G WV L ++ +N +++P GFAHGF
Sbjct: 65 EKPQGKLVRVTKGEVFDVAVDMRQSSPTFGKWVGLYLNESNKQMLWVPPGFAHGFYVTSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E YK TD+YS + + W D S+ I WP P ++EKD ++
Sbjct: 125 EAEFQYKCTDYYSPGDEYSLFWSDSSLAIGWP-GIGGCPQLAEKDAQGKSFIEL 177
>gi|257784799|ref|YP_003180016.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium parvulum DSM 20469]
gi|257473306|gb|ACV51425.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Atopobium parvulum DSM 20469]
Length = 201
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V+++ + + D+RG F +TY + G+ FVQDN S+S G +RGLHFQ
Sbjct: 22 SIEGVKVVDVKLYGDARGGFMETYREENFVAGGIGASFVQDNQSYSVQ-GVLRGLHFQI- 79
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ QAKLVR I+G +FD+AVD+R SPT+G W + +SA N Q ++P GFAHGF+ L
Sbjct: 80 EHPQAKLVRVISGTVFDVAVDLREGSPTWGQWEGVILSAENRRQFFVPRGFAHGFLVLSE 139
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPL------LDTILPSVSEKDQNLPFLNQI 175
E YK D Y + G+ W D + + WP LD +S+KD+ P L+ +
Sbjct: 140 TAEFCYKCDDIYHPGDEGGIMWNDPELGVEWPAFLGEKNLDPAKVILSDKDKIHPALSTL 199
Query: 176 DS 177
Sbjct: 200 KK 201
>gi|300812685|ref|ZP_07093095.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300496345|gb|EFK31457.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 202
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +TY+ +KE G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPAVHGDDRGYFMETYNENDMKEAGFDINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 FPQCKLVRAVRGDVFDVAVDLRSDSKTYGKWYGVELTAENKKQFLIPEGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S++D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPQLVGEYPGSADASGYALEDGTKLTLSDRD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q + F++
Sbjct: 191 QKWLGIKD---TFKF 202
>gi|152993302|ref|YP_001359023.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurovum sp. NBC37-1]
gi|151425163|dbj|BAF72666.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurovum sp. NBC37-1]
Length = 191
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 82/182 (45%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
M I+ V +++ + +D RG+F +T+ L+ LG + F QDN S S G +RGLH+Q
Sbjct: 6 MEISDVIVIEPKIHKDERGYFIETFRVDKLESFLGYKIDFCQDNESKS-SKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PP+AQ KLVR + GR+ DIAVDIR+ SPT+G V++E+S N Q+ +P GFAH F+ L
Sbjct: 65 LPPFAQTKLVRVVVGRVLDIAVDIRKGSPTFGKHVAVELSGENRKQLLVPRGFAHAFVVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E NT YKV +YS E+D G+++ DK + I+WPL L +S +D + P L++ D F
Sbjct: 125 EDNTIFAYKVDSYYSPEYDRGISYADKELAISWPLPSEEL-KLSTRDTSQPKLHETDEIF 183
Query: 180 EY 181
EY
Sbjct: 184 EY 185
>gi|71276345|ref|ZP_00652622.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Dixon]
gi|71901359|ref|ZP_00683453.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Ann-1]
gi|170729450|ref|YP_001774883.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa M12]
gi|71162807|gb|EAO12532.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Dixon]
gi|71728858|gb|EAO30995.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Ann-1]
gi|167964243|gb|ACA11253.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa M12]
Length = 185
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ R F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCLVIEPRVFDDARGEFFEAWNAECFERQGMSSRFVQSNVSISMY-GVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIR SP YG WV++ +SA N Q++IP GFAHGF+ L
Sbjct: 67 -PQGKLVGVLEGEVYDVAVDIRLGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+G+ W D + + WP+ P +S KDQ PF+ ++ D
Sbjct: 126 AVFNYLCTDVYVKEADAGIRWNDAVLGVDWPI---ATPLLSAKDQKAPFMEEVPI----D 178
Query: 183 GLPLLSL 189
LP+
Sbjct: 179 RLPIYVP 185
>gi|9957843|gb|AAG09521.1|AF279620_5 dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica]
gi|226290775|gb|ACO40474.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Salmonella enterica subsp.
enterica serovar Dakar]
gi|298353037|gb|ADI77016.1| RmlC [Salmonella enterica]
Length = 183
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 115/177 (64%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ I++ + D+RG+F ++Y+ + ++L + F QDN S S G +RGLHFQ
Sbjct: 7 KIHEALIIEPIIYSDARGFFFESYNQLIFEDLIERKINFCQDNQSLSHK-GVLRGLHFQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AQ KLVRC+ G+I+D+ VD+R +SPTY W +SA+N Q++IP G AHGF++LE
Sbjct: 66 NPKAQGKLVRCLHGKIYDVIVDLRVDSPTYKKWEGFVLSASNKKQLWIPEGCAHGFLSLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
NTE+ YK T++YS++H+ + W D S+ I WPL D +SEKD+N ++ ++
Sbjct: 126 DNTELAYKATEYYSLQHERCIRWNDPSLKIEWPLSDY---IISEKDKNGISFSEWEN 179
>gi|317968490|ref|ZP_07969880.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. CB0205]
Length = 196
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 8/175 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG-----LQDVFVQDNHSFSFDCGTIRGLH 57
++ ++ R F DSRG+F ++++ + + FVQDNHS S G +RGLH
Sbjct: 14 LSGPLLITPRVFGDSRGFFYESWNQRSFNAVLEADGQSSADFVQDNHSRSTQ-GVLRGLH 72
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
FQ+ P+ Q KLVRCI G IFD+AVD R++SPT+G W+S +S++N Q+++P GFAHGF+
Sbjct: 73 FQKDPHGQGKLVRCIQGEIFDVAVDCRQSSPTFGQWISARLSSDNQQQLWVPVGFAHGFL 132
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
TL EV+YK TDF+ E + + W D + I WP + P ++EKD P
Sbjct: 133 TLSAQAEVLYKTTDFWDRESERSLLWSDPDLAIAWP--QSTAPLLAEKDAAAPSW 185
>gi|28897003|ref|NP_796608.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus RIMD
2210633]
gi|153839162|ref|ZP_01991829.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
AQ3810]
gi|260362303|ref|ZP_05775270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
K5030]
gi|260897618|ref|ZP_05906114.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
Peru-466]
gi|260899548|ref|ZP_05907943.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
AQ4037]
gi|28805211|dbj|BAC58492.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus RIMD
2210633]
gi|149747334|gb|EDM58312.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
AQ3810]
gi|308087540|gb|EFO37235.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
Peru-466]
gi|308108810|gb|EFO46350.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
AQ4037]
gi|308111319|gb|EFO48859.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Vibrio parahaemolyticus
K5030]
Length = 187
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I + +++ + F DSRG+F ++++ E G++ FVQDNHS S GT+RGLH Q
Sbjct: 7 EIEGLLVVEPKVFGDSRGFFLESWNKLKFDEATGMEVSFVQDNHSKSES-GTLRGLHIQ- 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR + G ++D+AVD+R++S TYG W L +SA N Q++IP GFAHGF+ LE
Sbjct: 65 TKNAQGKLVRVVKGAVYDVAVDLRKDSKTYGKWFGLILSAENKKQLWIPKGFAHGFLALE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQI 175
+TE +YK +Y ++ + W DK++ I W +S+KD L++
Sbjct: 125 DDTEFLYKCDGYYDPLYEVSIDWNDKALAIDWGQFESFKTLKLSDKDSKGIGLSEF 180
>gi|317492479|ref|ZP_07950907.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919471|gb|EFV40802.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 173
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
M + +I++ + F DSRG+F +T+ K +E L + FVQDNHS S +RGLHFQ
Sbjct: 1 MKLLGTKIIRPKVFGDSRGFFLETFEKKRYQEMLEIDLDFVQDNHSRSSK-NVLRGLHFQ 59
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FD+AVDIR SPT+G W + ++ N Q +IP G AHGF+ L
Sbjct: 60 -TSNPQGKLVRVVRGEVFDVAVDIRPESPTFGQWEGVLLNEENKTQFWIPPGLAHGFVVL 118
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TD+Y+ +++ + W D + I+WP+ P +SEKD+ L ++
Sbjct: 119 SDIADFEYKCTDYYNPANEACLIWNDPDVGISWPVD---CPKLSEKDKLGKTLKEL 171
>gi|42518976|ref|NP_964906.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus johnsonii NCC
533]
gi|41583263|gb|AAS08872.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus johnsonii NCC
533]
gi|120400366|gb|ABM21421.1| sugar biosynthesis protein [Lactobacillus johnsonii]
Length = 202
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + + G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQS-SSTKGVLRGLHFQ-KK 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R +S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQIKLVRAVRGSVFDVAVDLRSDSKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S++D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPHLKGDYPGSPDASGYTLDDGTKLTLSDRD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|21231461|ref|NP_637378.1| strX protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66768485|ref|YP_243247.1| strX protein [Xanthomonas campestris pv. campestris str. 8004]
gi|21113134|gb|AAM41302.1| strX protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573817|gb|AAY49227.1| strX protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 193
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ I++ D+RGWF++ + ++ + + GL D FVQ N+SF+ + GT+RG+H+Q PP
Sbjct: 8 LSGAFIIEPEPRGDARGWFARVFCTQEMAQAGLVDQFVQVNNSFNAEAGTLRGMHYQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ K+VRCI G ++D VD+R +SPTY W +E++A+N L +Y+P GFAHGF+TL+
Sbjct: 68 APEVKIVRCIRGALWDAIVDLRPDSPTYLQWYGVELTADNRLALYVPRGFAHGFITLQAQ 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
TE +Y + Y+ + G+ W D I I WP VS+KD P N+
Sbjct: 128 TEALYFASAMYTPAAERGLRWDDARIGIRWPCTP---ALVSDKDAAWPEFNE 176
>gi|328948422|ref|YP_004365759.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema succinifaciens DSM
2489]
gi|328448746|gb|AEB14462.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Treponema succinifaciens DSM
2489]
Length = 199
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/183 (39%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ ++ + F DSRG+F +TYS K E GL+ FVQDN S S G +RGLHFQ
Sbjct: 14 EFAGLYEIQPKVFGDSRGYFLETYSEKDFFEAGLKMKFVQDNQS-SSSKGVLRGLHFQ-T 71
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G++FD+AVD+R+ S T+G + + + + Q YIP GFAHGF +
Sbjct: 72 RHPQGKLVRSLQGKVFDVAVDLRKGSATFGKYYGVVLDSEKQNQFYIPEGFAHGFYVISD 131
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ YK TDFY E + G+ W D SI + W + P +SEKD+ + F+
Sbjct: 132 SAVFAYKCTDFYHPEDEDGLMWNDSSIGVDWKSVGAGETPLLSEKDKKHLAFSFDADYFD 191
Query: 181 YDG 183
+G
Sbjct: 192 LNG 194
>gi|315657310|ref|ZP_07910192.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315491782|gb|EFU81391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 205
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++F D RG F + Y E +G VQ N S S G +RG+HF
Sbjct: 6 LKIAGAWEITPKQFPDERGAFMEMYKMGEFAEVVGHPLNLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGQWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y ++ Y+ + GV+ D + + WP D + +SEKD P L +
Sbjct: 125 EDDSTVVYLCSEGYNPGREHGVSPVDPEVALKWPDHDLAGRPLEVILSEKDTAAPSLTEA 184
>gi|114799033|ref|YP_759507.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hyphomonas neptunium ATCC
15444]
gi|114739207|gb|ABI77332.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hyphomonas neptunium ATCC
15444]
Length = 193
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V + + D RGWFS+TY+ G+ FVQDN S S GT+RGLHFQ+PP
Sbjct: 9 LPEVLHVLPARHTDGRGWFSETYNRSAFFAAGIDFEFVQDNQSRSEKAGTVRGLHFQKPP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVRC+ GRI D+ VDIR SP +G + ++E+SA NG Q+ IP GFAHGF +L+
Sbjct: 69 HEQVKLVRCLQGRILDLVVDIRPGSPRFGKFTAVELSAINGRQLLIPAGFAHGFCSLDDG 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E+ YKV+ Y+ + D+GVA+ D I I WP T +S+KD+ LP L
Sbjct: 129 CEIYYKVSAHYAPQSDAGVAFDDPEIGIHWPFP-TDSLILSDKDRRLPALKD 179
>gi|170755117|ref|YP_001782316.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum B1 str.
Okra]
gi|169120329|gb|ACA44165.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum B1 str.
Okra]
Length = 189
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 77/173 (44%), Positives = 100/173 (57%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ + F D RG+F +T++ + K GL VFVQDN S S G +RGLHFQ
Sbjct: 11 IEDLYVIEPKVFSDPRGYFMETHNYEDFKTAGLDMVFVQDNQSKSKK-GVLRGLHFQ-KK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVDIR NS T+G W + +S N Q YIP GFAHGF+ L
Sbjct: 69 HPQGKLVRVIKGEVFDVAVDIRENSSTFGKWYGVILSEENKKQFYIPGGFAHGFLVLSDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLN 173
E YK TDFY E + G+ W D +I I WP +SEKD+ L
Sbjct: 129 AEFYYKCTDFYHPEDEGGIIWNDPTISIVWPFEKIKDANILLSEKDRKWTILE 181
>gi|71898670|ref|ZP_00680840.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Ann-1]
gi|71731617|gb|EAO33678.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Ann-1]
Length = 185
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ R F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCLVIEPRVFDDARGEFFEAWNAECFERQGMSSRFVQSNVSISMY-GVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L
Sbjct: 67 -PQGKLVGVLEGEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+G+ W D I + WP+ P +S KDQ PF+ ++ D
Sbjct: 126 AVFNYLCTDVYVKEADAGIRWNDAVIGVDWPI---AAPLLSAKDQKAPFMEEVPI----D 178
Query: 183 GLPLLSL 189
LP+
Sbjct: 179 RLPIYVP 185
>gi|312194518|ref|YP_004014579.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EuI1c]
gi|311225854|gb|ADP78709.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EuI1c]
Length = 182
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I+ F D RG F++T+ + GL Q + +++ GT+RGLH+ P
Sbjct: 8 LDGVFIVDIEPFSDDRGLFARTFCREEFAAAGLDVDVAQCSVAYNRRAGTVRGLHWAGAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ KLVR G + D+ VD R SPT+ V++E+SA+N ++I G AHG+ TL +
Sbjct: 68 VQETKLVRVTRGALLDVVVDTRPGSPTFLRHVAVELSADNHRALFIGAGLAHGYQTLVDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
TE Y++ + D G+ D ++ I WPL + +S+KD+ P L + D
Sbjct: 128 TEASYQMNVPFRPGFDRGLRHDDPALGIAWPLP---VSVISDKDRAWPLLGEAD 178
>gi|325286259|ref|YP_004262049.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulophaga lytica DSM 7489]
gi|324321713|gb|ADY29178.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulophaga lytica DSM 7489]
Length = 183
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ +L+ F D RG+F ++Y++ ++ + FVQDN SFS G IR LH+Q+
Sbjct: 9 KLQGCLVLEPTLFNDDRGYFFESYNTNRFNDIVDQEVNFVQDNQSFS-TRGVIRALHYQK 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQAKL+R + G I D+AVD+R +S TYG + S+E+S+ N Q+++P GFAHGF L
Sbjct: 68 GNNAQAKLIRVLNGVILDVAVDLRPHSKTYGEYFSVELSSENKKQLFVPRGFAHGFSVLS 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+YK ++Y+ E + G+ + D +++I W + + VSEKD LP L +I
Sbjct: 128 DTAEVLYKCDNYYNKESEGGIIYNDVTLNIDWKVSPEEI-KVSEKDLILPTLKEI 181
>gi|283795741|ref|ZP_06344894.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. M62/1]
gi|291076679|gb|EFE14043.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. M62/1]
Length = 201
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 104/194 (53%), Gaps = 20/194 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D+RG+F +TYS + ++E G+ FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLCVITPAVHGDARGYFMETYSQRDMEENGININFVQDNQSMS-VKGVLRGLHFQ-KN 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR I G +FD+AVD+R S TYG W +E++ +N Q IP GFAHGF+ L
Sbjct: 71 FPQTKLVRVIKGSVFDVAVDLRSGSETYGKWYGIELTEDNKKQFLIPRGFAHGFLVLSDT 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPL---------------LDTILPSVSEKDQ 167
E YK DFY + G+AW D I I WP +D + ++S+KDQ
Sbjct: 131 AEFCYKCDDFYHASDEGGLAWNDPEICIVWPKVEGTYQGTASAEGYSVDGVALNLSDKDQ 190
Query: 168 NLPFLNQIDSPFEY 181
L F++
Sbjct: 191 KWLGLKD---TFKF 201
>gi|116514775|ref|YP_813681.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|116094090|gb|ABJ59243.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 204
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 103/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +TY+ +KE G FVQDN S S G +RGLHFQ
Sbjct: 15 IEGLAVITPAVHGDDRGYFMETYNENDMKEAGFDINFVQDNQS-SSTKGVLRGLHFQ-KH 72
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G +FD+AVD+R +S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 73 FPQCKLVRAVRGDVFDVAVDLRSDSKTYGKWYVVELTAENKKQFLIPEGFAHGFLVLSDV 132
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D +I I WP L D ++S++D
Sbjct: 133 AEFCYKVNDFWHSNDEGGMAWNDPAIGIEWPQLVGEYPGSADASGYALEDGTKLTLSDRD 192
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 193 QKWLGLKD---TFKF 204
>gi|324519856|gb|ADY47498.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Ascaris suum]
Length = 304
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYS-SKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I +++++ + F D RG+FS++Y+ + K+LG +VF QDNHSFS G +RGLH Q
Sbjct: 130 DIPDLKLIRPKVFPDERGFFSESYNIVEWSKQLGFSEVFKQDNHSFSKF-GVLRGLHCQP 188
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLV I+G I+D+AVDIR S TYG W + + +IP GF HGF TL
Sbjct: 189 ---GMGKLVSVISGMIYDVAVDIRPGSATYGKWHGVILDGKTNTNFWIPDGFLHGFYTLS 245
Query: 121 MN-TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V+YK TD Y+ + GV D+ I + WP+ + + +SE+D++ L I
Sbjct: 246 PEGAHVVYKCTDVYNPTTEFGVNPFDEEISVKWPIANKDIVIMSERDKSHQNLKDI 301
>gi|268579719|ref|XP_002644842.1| Hypothetical protein CBG05010 [Caenorhabditis briggsae]
gi|187035274|emb|CAP25601.1| hypothetical protein CBG_05010 [Caenorhabditis briggsae AF16]
Length = 190
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++K + F D RG+FS++Y+ E +Q ++ G +RGLH Q
Sbjct: 20 IPDLLVIKPKVFPDERGFFSESYNKTEWAEKIGYTEDLQQDNHSFSHYGVLRGLHTQPH- 78
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV ++G IFD+AVDIR++SPTYG W + ++ +N +IP GF HGF L
Sbjct: 79 --MGKLVTVVSGEIFDVAVDIRKDSPTYGKWHGVILNGDNKHAFWIPAGFLHGFQVLSKE 136
Query: 123 -TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
V YK + Y + + G+ D+ I++ WP+ D VSE+D
Sbjct: 137 GAHVTYKCSAVYDPKTEFGINPFDEDINVDWPIKDKASVIVSERDTQHASFK 188
>gi|189218516|ref|YP_001939157.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylacidiphilum infernorum
V4]
gi|189185374|gb|ACD82559.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylacidiphilum infernorum
V4]
Length = 181
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 102/173 (58%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + ++ K ED RG+F++ + + + GL Q N S S GT+RGLH+Q
Sbjct: 6 LPLAGAFLIDLEKKEDPRGFFARVFCRREYEAHGLDPDIAQINTSLSLKKGTLRGLHYQV 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P A+ K++RC+ G ++D+ VD+R S TY C E++ N +Y+P GFAHGF+TL
Sbjct: 66 FPKAETKVIRCLRGALWDVIVDLRPESKTYLCHYGCELNEENRRMVYVPRGFAHGFLTLA 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
NTE Y V +FYS EH+ G+ + D +++ITWP +SEKD+N P N
Sbjct: 126 DNTEAYYLVGEFYSPEHERGIRYNDPALNITWPFEP---LVISEKDRNYPDWN 175
>gi|298491812|ref|YP_003721989.1| dTDP-4-dehydrorhamnose 3,5-epimerase ['Nostoc azollae' 0708]
gi|298233730|gb|ADI64866.1| dTDP-4-dehydrorhamnose 3,5-epimerase ['Nostoc azollae' 0708]
Length = 181
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I+ + D RG+F++T+ ++ GL+ Q N SF+ GT+RG+H+Q
Sbjct: 7 ELPGAFIIDLEEKPDQRGFFARTFCAQEFANHGLKPTVAQCNLSFNHIKGTLRGMHYQLL 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P A+ KLVRC G I+D+ VD+R PTY + LE+SA N +Y+P FAHG+ L
Sbjct: 67 PAAETKLVRCTQGAIYDVIVDMRPEFPTYLSHIGLELSAENRRALYVPEMFAHGYQALTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
EV+Y+V +FY+ ++ G+ + D ++I+WPL T +S+KD+N P L I
Sbjct: 127 GAEVVYQVGEFYTPGYERGLRYDDPLLEISWPLAATE---MSDKDRNWPLLESI 177
>gi|322433923|ref|YP_004216135.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium sp. MP5ACTX9]
gi|321161650|gb|ADW67355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidobacterium sp. MP5ACTX9]
Length = 184
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 7/178 (3%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V++++ R+F D RGWF++ ++++ GL FVQDN SFS G +RGLH+Q
Sbjct: 10 DVKLIRPRRFGDDRGWFAEMFNTQAFAANGLPAQFVQDNQSFS-AKGVLRGLHYQ-LERP 67
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNG----LQIYIPTGFAHGFMTLE 120
Q KLVRC++G I+D+AVD+RR SP +G W + ++ N ++IP GFAHGF+ L
Sbjct: 68 QGKLVRCLSGHIWDVAVDLRRESPDFGKWAAFDLKPLNDAGELELLWIPEGFAHGFLVLS 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
EV+YK TD Y + V W D ++ I WPL + I PS+S KD + D P
Sbjct: 128 ETAEVLYKTTDLYHPLGERCVKWDDPTLAIPWPL-EGITPSISGKDALGKTFAEADLP 184
>gi|308510905|ref|XP_003117635.1| hypothetical protein CRE_00181 [Caenorhabditis remanei]
gi|308238281|gb|EFO82233.1| hypothetical protein CRE_00181 [Caenorhabditis remanei]
Length = 190
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++K + F D RG+FS++Y+ E +Q ++ G +RGLH Q
Sbjct: 20 IPDLLVIKPKVFPDERGFFSESYNKTEWAEKIGYTEDLQQDNHSFSHYGVLRGLHTQPH- 78
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV ++G IFD+AVDIR++SPTYG W + ++ANN +IP GF HGF L
Sbjct: 79 --MGKLVTVVSGEIFDVAVDIRKDSPTYGKWHGVILNANNKHAFWIPAGFLHGFQVLSKE 136
Query: 123 -TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
V YK + Y + + G+ D+ I++ WP+ D + VSE+D
Sbjct: 137 GAHVTYKCSAVYDPKTEYGINPFDEDINVDWPIKDKSVVIVSERDTQHASFK 188
>gi|163757897|ref|ZP_02164986.1| strX protein [Hoeflea phototrophica DFL-43]
gi|162285399|gb|EDQ35681.1| strX protein [Hoeflea phototrophica DFL-43]
Length = 182
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I + + D RG F++ + + GL + Q N S S GT+RGLHFQR
Sbjct: 6 LSIEGAFRIDPERIGDERGSFARMFCTSEFSAHGLATSWAQMNVSHSARVGTLRGLHFQR 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP A+AKLVRC+ G +FD+ VD+R SP +G W S+E++ +G +Y+P G AHGF TL
Sbjct: 66 PPAAEAKLVRCLKGAMFDVLVDLRSGSPGFGQWTSVELTPESGAMVYVPEGVAHGFQTLL 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+TEV+Y + Y EH+ G+ + D+S+ + WPL + +SE+D+ P L
Sbjct: 126 PDTEVLYCHSVPYQREHEGGLRFDDESVGVAWPLPVST---LSERDKAHPGL 174
>gi|319953124|ref|YP_004164391.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Cellulophaga algicola DSM
14237]
gi|319421784|gb|ADV48893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulophaga algicola DSM
14237]
Length = 181
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 104/175 (59%), Gaps = 3/175 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +++ +KFED RG+F ++++ + EL + FVQDN S+S G IR +H+Q+
Sbjct: 8 LKGCFVIEPKKFEDDRGYFFESFNEEKFNELTETETKFVQDNQSYS-TRGVIRAIHYQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLVR + G + DIAVD+RR+S T+G ++E+S N Q+YIP GF HGF L
Sbjct: 67 IYAQAKLVRVLKGTVLDIAVDLRRDSSTFGKHYAIELSEKNNKQLYIPRGFGHGFSVLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK +FY+ + G+ + D+ ++I W + D L VS KD LP N
Sbjct: 127 TAVFFYKCDNFYNAASEGGIIYNDEELNIDWKVEDKYL-KVSSKDLILPKFNNAK 180
>gi|157373249|ref|YP_001471849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sediminis HAW-EB3]
gi|157315623|gb|ABV34721.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sediminis HAW-EB3]
Length = 190
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ++I++ F D RG+F +++ +E FVQ+NHS S G +RGLH+Q
Sbjct: 8 IADLKIIEPNLFGDERGFFFESFRDSWFREHVSDVHFVQENHSRS-KRGILRGLHYQ-SS 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR I+G +FD+AVD+RR S TYG W +S N Q++IP GFAHGF + +
Sbjct: 66 QTQGKLVRVISGEVFDVAVDLRRESTTYGQWFGTYLSEENRRQLWIPAGFAHGFYVISES 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPL--------LDTILPSVSEKDQNLPFLN 173
+ IYK TD+Y+ E + + W D + + WPL D P +S KD N
Sbjct: 126 ADCIYKCTDYYAPEFEKTIIWNDTELSVDWPLSRVNRSKTDDIAQPILSAKDSAGLAFN 184
>gi|119720615|ref|YP_921110.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermofilum pendens Hrk 5]
gi|119525735|gb|ABL79107.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermofilum pendens Hrk 5]
Length = 190
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 6/181 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +++ F D RG+F++ Y G+ FVQ N SFS G +R LH+Q
Sbjct: 14 LEIPDVVLVEYAVFPDERGFFAELYKRTEFLSGGVPYGFVQVNLSFS-RAGVVRALHYQL 72
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV ++GR+FD+AVDIRR SP +G VS+ + G +++P GFAHGF LE
Sbjct: 73 KPMEQGKLVYVVSGRVFDVAVDIRRGSPWFGRHVSVVLEP--GFALWVPPGFAHGFQALE 130
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ +Y VT YS +H+ + W+D + I WP ++ VS +D P + ++ FE
Sbjct: 131 D-SFFLYFVTKEYSPQHERCIFWRDPDLGIRWPRVEG--AVVSGRDSRCPLFREAETNFE 187
Query: 181 Y 181
Y
Sbjct: 188 Y 188
>gi|15836862|ref|NP_297550.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa 9a5c]
gi|9105072|gb|AAF83070.1|AE003879_5 dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa 9a5c]
Length = 185
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ R F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCLVIEPRVFDDARGEFFEAWNAECFQRQGMSSRFVQSNVSISMY-GVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L
Sbjct: 67 -PQGKLVGVLEGEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+G+ W D I + WP+ +P +S KDQ PF+ ++ D
Sbjct: 126 AVFNYLCTDVYVKEADAGIRWNDALIGVDWPI---AVPLLSAKDQKAPFMEEVPI----D 178
Query: 183 GLPLLSL 189
LP+
Sbjct: 179 RLPIYVP 185
>gi|304390054|ref|ZP_07372008.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326536|gb|EFL93780.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 205
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++F D RG F + Y E +G VQ N S S G +RG+HF
Sbjct: 6 LKIAGAWEITPKQFPDERGAFMEMYKMGEFAEVVGHPLNLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGQWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y ++ Y+ + GV+ D + + WP D + +SEKD P L +
Sbjct: 125 EDDSTVVYLCSEGYNPGREHGVSPVDPEVALKWPDHDLAGRPLEVILSEKDTAAPSLVEA 184
>gi|227819574|ref|YP_002823545.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium fredii NGR234]
gi|227338573|gb|ACP22792.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium fredii NGR234]
Length = 179
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ D RG F++ + K + + GL FVQ + S S GT+RGLHFQ
Sbjct: 7 ELKGVWLIEPTPVIDDRGSFTRVFCEKEMADFGLATRFVQHSRSHSVRKGTLRGLHFQEE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ + KLV C G IFD+ VD+R NSPT W+ E++ N Q+YIP GFAHGF TL
Sbjct: 67 PHTEVKLVSCACGAIFDVVVDLRPNSPTRNRWLGFELTPENMKQVYIPAGFAHGFQTLTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
+ EV Y ++ FY+ +GV + D + I WPL+ T +SE+D+ P
Sbjct: 127 DAEVSYLISQFYTPHAATGVRFNDPAFSINWPLMPTA---MSERDRTWPL 173
>gi|28198138|ref|NP_778452.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Temecula1]
gi|182680768|ref|YP_001828928.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa M23]
gi|28056198|gb|AAO28101.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa Temecula1]
gi|182630878|gb|ACB91654.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa M23]
gi|307579234|gb|ADN63203.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 185
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 9/187 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ R F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P
Sbjct: 8 LPGCLVIEPRVFDDARGEFFEVWNAECFEHQGMSSRFVQSNVSISIY-GVLRGLHYQWPR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLV + G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L
Sbjct: 67 -PQGKLVGVLEGEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSER 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
Y TD Y E D+G+ W D I + WP+ P +S KDQ PF+ ++ D
Sbjct: 126 AVFNYLCTDVYVKEADAGIRWNDAVIGVDWPI---AAPLLSAKDQKAPFMEEVPI----D 178
Query: 183 GLPLLSL 189
LP+
Sbjct: 179 RLPIYVP 185
>gi|291566907|dbj|BAI89179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arthrospira platensis
NIES-39]
Length = 178
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ +D RG+FS+++ K E GL VQ N SF+ GT+RG+H+Q
Sbjct: 7 ELKGAYIVELEPIQDERGFFSRSWCQKEFAERGLTSNLVQCNISFNRHKGTLRGMHYQAK 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ +AK+VRC G I+D+ +DIR +S T+ WV++E++A N +YIP G AHGF TL
Sbjct: 67 PHEEAKVVRCTMGAIYDVIIDIRPDSATFKQWVAVELTAENRKMLYIPEGMAHGFQTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
NTEV Y++++FY E G+ W D ITW + P +S+KD+N
Sbjct: 127 NTEVFYQMSEFYHPESARGLRWDDPRFGITWIHNN---PIMSDKDKN 170
>gi|298346186|ref|YP_003718873.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC
43063]
gi|298236247|gb|ADI67379.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC
43063]
Length = 205
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++F D RG F + Y E +G VQ N S S G +RG+HF
Sbjct: 6 LKIAGAWEITPKQFPDERGAFMEMYKMGEFAEVVGHPLNLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGQWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E N+ V+Y ++ Y+ + GV+ D + + WP D + +SEKD P L +
Sbjct: 125 EDNSTVVYLCSEGYNPGREHGVSPVDPEVALKWPDHDLAGRPLEVILSEKDTAAPSLVEA 184
>gi|158056586|emb|CAP11386.1| 3,5-epimerase [Streptomyces olivaceus]
Length = 201
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I ++F D+RG F + Y ++ + E G Q N S S G +RG+HF
Sbjct: 6 LGIEGAWEFVPQQFGDARGLFLEWYKAERMAEAVGHPLNLKQGNLSVSSA-GVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + DI VD+R SPT+G W ++ + + +Y+ G HGF L
Sbjct: 65 DVPPGQAKYVTCVRGAVLDIIVDVRVGSPTFGKWEAVRLDDKDRKAVYLSEGLGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V Y ++ Y+ E + V D I I WP+ P +S KD P L Q
Sbjct: 125 TDDATVTYLCSEGYAPERERTVYPLDPEIGIEWPVDGE--PELSAKDAQGPTLAQA 178
>gi|261366442|ref|ZP_05979325.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Subdoligranulum variabile DSM
15176]
gi|282571706|gb|EFB77241.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Subdoligranulum variabile DSM
15176]
Length = 188
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++++ F D RG+F +TY G+ FVQDN S S G +RGLHFQ
Sbjct: 10 EIPEVQVIEPTVFGDDRGYFMETYQIDDFAAAGIDKPFVQDNQSRS-TKGVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR G +FD+AVD R +S T+G WV + +SA N +YIP GFAHGF+ L
Sbjct: 68 NHTQGKLVRVTLGEVFDVAVDCRPHSATFGKWVGVTLSAENKKMLYIPEGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
E YK TD Y + G+ + D ++++ WP S KD+ + F
Sbjct: 128 VAEFCYKCTDVYDPTSEGGIPYDDPTVNVQWP-DCGCEHKTSAKDKEHTPFAEQKFEF 184
>gi|253581530|ref|ZP_04858755.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium varium ATCC
27725]
gi|251836600|gb|EES65135.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium varium ATCC
27725]
Length = 203
Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 82/176 (46%), Positives = 109/176 (61%), Gaps = 6/176 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + IL+ F D RG+F +TY+ K +E+G+ + FVQDNHS S G +RGLHFQ
Sbjct: 11 IEGLYILEPTVFGDERGFFLETYNKKEFEEIGIFEEFVQDNHSKS-KKGVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
++Q KLVR I G ++D+AVDIR+ SPTYG W +E++A N +IP GFAHGF+TLE
Sbjct: 69 HSQGKLVRVIKGAVYDVAVDIRKGSPTYGKWYGIELNAVNKKMFFIPKGFAHGFLTLEDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQ 174
TE YK TD Y E+DSG+ W DK I+I W +SEKD+ +
Sbjct: 129 TEFQYKCTDLYHPEYDSGIMWNDKDININWNFEKYGLKEENMVLSEKDKKHQSFKE 184
>gi|315023084|gb|EFT36097.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Riemerella anatipestifer
RA-YM]
gi|325336323|gb|ADZ12597.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Riemerella
anatipestifer RA-GD]
Length = 181
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/178 (40%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ FED RG+F Q ++ K ++L G+ FVQDN S S G +RGLH Q+
Sbjct: 8 LKDCYIIEPTIFEDERGYFYQKFNEKKFEDLTGMNGHFVQDNISKS-SYGVLRGLHLQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLV C+ G+++D+AVD+R +SP++G W +E++A N LQ Y+P GFAHGF L
Sbjct: 67 EHAQAKLVSCLEGKVWDVAVDLREDSPSFGKWYGVELTAENKLQFYVPRGFAHGFAVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK +FY+ E + G+ W D + I W L +T + +SEKD+ + F
Sbjct: 127 MAVFAYKCDNFYNKESEGGILWNDADLAIDWKLDETDV-ILSEKDKVQLPFS--KKNF 181
>gi|124025562|ref|YP_001014678.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
NATL1A]
gi|123960630|gb|ABM75413.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
NATL1A]
Length = 193
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I +L F D RG+F ++++ K+ LG + F QDN S S G +RGLH+Q
Sbjct: 12 EIEGPLLLTPNVFNDERGYFYESWNEKIFNSILGKEVRFKQDNISHS-IKGVLRGLHYQL 70
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P +Q KLVRC G IFD+AVDIR+ S T+G W+S E+S+ N Q++IP GFAHGF+T+
Sbjct: 71 KPESQGKLVRCSYGSIFDVAVDIRKESKTFGKWLSAELSSENKKQLWIPVGFAHGFLTIS 130
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD-TILPSVSEKDQNLPFLNQ 174
+ EV YK T F++ + + + W DK + ITWP+ + P ++EKD + PFL +
Sbjct: 131 DHAEVNYKATGFWNKDCEHSIRWNDKDLKITWPIKEFGFEPVINEKDASAPFLKE 185
>gi|311896581|dbj|BAJ28989.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Kitasatospora setae
KM-6054]
Length = 199
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + ++ D RG F + Y L E+ G Q N S S +RG+HF
Sbjct: 6 LSIPGAFEVTPQQHGDPRGLFMEWYRFDKLSEVVGHPLRLAQGNLSVSAK-NVVRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VD+R SP +G W + + + +Y+P G HGF L
Sbjct: 65 DVPPGQAKYVSCVRGAVLDVVVDLRVGSPAFGRWEFVRLDETDRRSVYLPEGLGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y ++ Y+ + GV D + I WP+ +P +S KD+ P L +
Sbjct: 125 TDDATLSYVCSETYNPTGEHGVHPLDPDLGIEWPVE---VPQLSAKDEQAPTLAEA 177
>gi|91794011|ref|YP_563662.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella denitrificans
OS217]
gi|91716013|gb|ABE55939.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella denitrificans
OS217]
Length = 179
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/170 (42%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE--LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V+I++ + D RG+F +T+ +E FVQDNH+ S G +RGLH+Q
Sbjct: 7 KIPDVKIIEPLVYGDERGFFMETWRQNEFEEKVAKKPCSFVQDNHTKS-KKGILRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
AQ KLVR ++G +FD+AVDIR++S TYG WV + +SA N Q+++P GFAHGF
Sbjct: 66 -TENAQGKLVRVVSGEVFDVAVDIRKDSLTYGQWVGVYLSAENKRQLWVPEGFAHGFYVT 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
E +YK T++Y+ + + W DKS++I WPL+D P +S KD++L
Sbjct: 125 SDEAEFVYKCTEYYNPSSEVSIFWDDKSLNIHWPLIDR--PLLSSKDESL 172
>gi|332300858|ref|YP_004442779.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas asaccharolytica
DSM 20707]
gi|332177921|gb|AEE13611.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas asaccharolytica
DSM 20707]
Length = 188
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ V +++ + D+RG+F++TY + +VQ+N S S G +RGLH QR
Sbjct: 8 LDLAGVYLIEPDCYGDARGYFAETYRTADFAATVSPRPWVQENES-SSVRGVLRGLHLQR 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+QAKLVRC+ G I D+ VD+RR+S TYG W S +S N Q+YIP FAHGF+ L
Sbjct: 67 GEASQAKLVRCVVGEIMDLIVDLRRDSDTYGQWRSYHLSETNHRQLYIPREFAHGFLVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFLNQ 174
+ +YKV + Y+ E + + + D + I W +S+KD L
Sbjct: 127 DQAKFLYKVDNGYAPESELCIRYDDPQLAIPWESWGIAPEELILSDKDLRGISLAD 182
>gi|33865182|ref|NP_896741.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 8102]
gi|33638866|emb|CAE07163.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 8102]
Length = 195
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++ + F D RGWF ++++ + E G VF QDNHS S G +RGLH+Q
Sbjct: 14 IEGPLLISPQAFGDERGWFFESWNQRRFDEAVGEAVVFSQDNHSRS-VQGVLRGLHYQLE 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QAKLVR G+IFD+AVDIR+ S T+G WV ++SA N Q+++P GFAHGF+TL
Sbjct: 73 PEPQAKLVRASVGKIFDVAVDIRQGSATFGQWVGAQLSAENKQQLWVPEGFAHGFLTLSA 132
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQID 176
EV YK F++ + + W D SI+I WPL S+S KD P L+Q
Sbjct: 133 VAEVQYKARGFWNKSCERAIRWDDASINIRWPLDLLGGAEVSLSGKDAEAPTLDQAK 189
>gi|187920919|ref|YP_001889951.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phytofirmans
PsJN]
gi|187719357|gb|ACD20580.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phytofirmans
PsJN]
Length = 182
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 104/175 (59%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++++ + F DSRG F +T++ +E FVQDNHS S G +RGLH+Q
Sbjct: 10 IPDVKVIEPQVFGDSRGAFLETFNQVEFEEKVARGYTFVQDNHSISAQ-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KLVR + G +FD+AVD+RR S T+G WV + +SA+N Q++IP GFAHGF+ L
Sbjct: 68 QHPQGKLVRVVVGEVFDVAVDLRRWSSTFGRWVGVRLSASNRRQLWIPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK T F+ EH+ + W D I + W L +P VS KD N+ +
Sbjct: 128 VAEFLYKATAFWHPEHERTLRWDDPDIAVEWEL--NGVPFVSSKDAAGSRFNEAE 180
>gi|73667779|ref|YP_303794.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina barkeri str.
Fusaro]
gi|72394941|gb|AAZ69214.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina barkeri str.
Fusaro]
Length = 183
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 108/179 (60%), Gaps = 3/179 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
I + +L+ + FED RG+F ++Y+ K L L + FVQDN S S G IRGLH+Q
Sbjct: 7 KIKDLYMLEPKVFEDDRGYFLESYNKKTLDSLLEKEYTFVQDNESKS-SYGVIRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P++QAKL+R + G+++D+AVD+R+NSPT+ WV +E+SA N Q IP GFAHGF L
Sbjct: 66 GPFSQAKLIRVVQGKVYDVAVDLRKNSPTFLDWVGVELSAENKRQFLIPKGFAHGFSVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
YK ++Y E ++G+ + D S++I W + + + S KD L L + F
Sbjct: 126 ETAIFQYKCDEYYHPEAEAGIIYNDSSLNIDWKIKAEDIKT-SPKDLLLQKLEEAKMNF 183
>gi|328954210|ref|YP_004371544.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfobacca acetoxidans DSM
11109]
gi|328454534|gb|AEB10363.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfobacca acetoxidans DSM
11109]
Length = 185
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 96/177 (54%), Gaps = 5/177 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +++++ R F D RG+F Y + + G++ FVQD+ S+S G +RGLH+Q
Sbjct: 7 DLPEIKLIEPRVFTDRRGYFFDIYQALGYSDHGIEARFVQDSLSYSLH-GVVRGLHYQ-L 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KL+ + G + D+ VDIR S + W +SA+N Q+++P GFAHGF +
Sbjct: 65 RRPQGKLITVLQGEVIDVVVDIRLGSKNFARWTKNLLSADNHRQLFVPPGFAHGFTVISE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
++YK TD+Y + G+ W D + I WP+ +S+KD LP L +
Sbjct: 125 AAAILYKCTDYYDPLDEYGILWNDSHLGIDWPV---TAHILSDKDARLPLLRDVPDN 178
>gi|256397295|ref|YP_003118859.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Catenulispora acidiphila DSM
44928]
gi|256363521|gb|ACU77018.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Catenulispora acidiphila DSM
44928]
Length = 200
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ + R D RG F++ Y LL E G Q N S S G +RG+HF
Sbjct: 6 LSIDGAWEITPRLHGDPRGLFTEWYRFDLLAEAVGHPLDLRQGNLSVSAA-GVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G + D+ DIR SPT+G W + + + +YI G HGF L
Sbjct: 65 DVPPGQAKYVTCTRGAVLDVIADIRVGSPTFGQWQGVRLDEDTRKAVYIAEGLGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y + Y+ H+ GV D + I WP +P +SE+D+ P L +
Sbjct: 125 TDDATLTYLCSATYNPGHEHGVYPLDAELGIDWP---AEVPHLSERDEKSPSLAEA 177
>gi|298209185|ref|YP_003717364.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Croceibacter atlanticus
HTCC2559]
gi|83849112|gb|EAP86981.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Croceibacter atlanticus
HTCC2559]
Length = 182
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ + F D RG+F + ++ ++ E L FVQDN S S G IRGLH+Q+
Sbjct: 8 LKDCYIIEPKVFYDERGYFYEQFNEQVFQAETKLNVKFVQDNVSES-KFGVIRGLHYQQG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
++QAKLV + G + D+A+D+R+NSP++G S+ +S+ N Q+++P GFAHGF L
Sbjct: 67 MHSQAKLVTVLEGEVLDVAIDLRKNSPSFGKQFSMILSSENKKQLFVPKGFAHGFSVLSK 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
YK +Y+ E ++G+ + D++++I W L D + V++KD++LP
Sbjct: 127 TARFFYKCDAYYNKESETGIKYNDETLNIDWQLKDGEI-IVNDKDKHLPDFKSA 179
>gi|158335345|ref|YP_001516517.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acaryochloris marina
MBIC11017]
gi|158305586|gb|ABW27203.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acaryochloris marina
MBIC11017]
Length = 185
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 67/181 (37%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I L+ F+D RG F +T+ ++ L+ F + +S+S +RGLHFQ P
Sbjct: 7 KIPGCFELELNVFKDQRGRFVKTFHEEIFASHQLETHFPEAYYSYSTQ-NVLRGLHFQIP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P K+V C G I D VD+R SPTYG + E+SA G YIP G AHGF +
Sbjct: 66 PKDHTKMVHCAQGEIVDAVVDLRVGSPTYGQFEVFELSAEKGNSAYIPPGLAHGFYIVSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
V+Y+V+ Y+ H+ G+ W I WP + P +SEKDQ L +SPF Y
Sbjct: 126 TALVMYQVSTVYAPGHEQGLLWNSAE--IPWPSTN---PIISEKDQGWKTLADYESPFVY 180
Query: 182 D 182
+
Sbjct: 181 E 181
>gi|269121010|ref|YP_003309187.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sebaldella termitidis ATCC
33386]
gi|268614888|gb|ACZ09256.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sebaldella termitidis ATCC
33386]
Length = 189
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 13/184 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ FED RG+F ++Y+ ++LGL+ F+QDNHS S G +RGLH+Q
Sbjct: 11 IADLVIIEPLVFEDERGFFLESYNKNHFEKLGLKMEFIQDNHSKSKK-GVLRGLHYQ-SK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
++Q KLVR G ++D+AVD+R SPT+G W LE++ N Y+P GFAHGF+TLE
Sbjct: 69 HSQGKLVRVTKGAVWDVAVDLRTESPTFGKWYGLELNEKNKKMFYVPEGFAHGFLTLEDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPS----VSEKDQNLPFLNQIDSP 178
TE YK TDFY E+DSG+ W D + I WP+ D + +S+KD+NL
Sbjct: 129 TEFQYKCTDFYYPEYDSGIFWNDDILKIEWPISDYGILINELVISDKDKNL-------EK 181
Query: 179 FEYD 182
F+Y+
Sbjct: 182 FDYE 185
>gi|329848964|ref|ZP_08263992.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Asticcacaulis biprosthecum
C19]
gi|328844027|gb|EGF93596.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Asticcacaulis biprosthecum
C19]
Length = 181
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 79/176 (44%), Positives = 111/176 (63%), Gaps = 1/176 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I +++ + D RG+F + + +E FVQDN S S GTIRGLH+Q
Sbjct: 7 DIEGPALIRPKMIGDERGFFMEAFKDAWFRENVEDVSFVQDNQSLSRQVGTIRGLHYQTA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q KLVRC+ G IFD+AVDIRR S T+G WV ++A G Q+++P GFAH F TLE
Sbjct: 67 PFGQGKLVRCLKGSIFDVAVDIRRGSATFGKWVGATLTAEKGEQLWVPDGFAHAFCTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+TEV YKVT+ YS +D+G+A+ D I I WP+ D + +S+KD+ P L+ + S
Sbjct: 127 DTEVFYKVTNPYSKPNDAGLAFDDPDIGIIWPI-DIAMAVLSDKDRLQPPLSSLIS 181
>gi|260428729|ref|ZP_05782707.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Citreicella sp. SE45]
gi|260420323|gb|EEX13575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Citreicella sp. SE45]
Length = 202
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 76/164 (46%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ +F D+RG FS+ ++ L+ + FVQDN S S D G +RGLH Q PP
Sbjct: 21 LPGVVIVTPNRFGDARGHFSEVWNRDTLRGHAIDIEFVQDNQSLSRDVGVVRGLHCQAPP 80
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR G IFD+AVD+RR+S TYG WV +E+SA NG Q+ +P GF HGF+T E +
Sbjct: 81 RAQDKLVRVAQGAIFDVAVDVRRDSETYGQWVGVELSAENGRQLLVPRGFLHGFVTREPD 140
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
T VIYK +D Y+ + + V W D + I W + D +S KD
Sbjct: 141 TLVIYKCSDSYAPDTERPVFWADPDLAIDWGI-DPAQAILSAKD 183
>gi|320332782|ref|YP_004169493.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Deinococcus maricopensis DSM
21211]
gi|319754071|gb|ADV65828.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Deinococcus maricopensis DSM
21211]
Length = 185
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I+ ED RG F++TY + E GL+ Q N SF+ GT+RG+HFQ PP
Sbjct: 8 LRGAFIIDVDVREDERGGFARTYCGREFAEHGLKVDVAQANLSFNHKAGTLRGMHFQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLVRC G I D+ VD+R +SPTY V++E+SA N +Y+P FAHG+ L
Sbjct: 68 FAETKLVRCTRGAILDVIVDLRPDSPTYLQHVAVELSAENRRALYVPELFAHGYQALTDG 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
EV+Y+V ++Y+ H+ G+ D + + WPL T +S KD P L
Sbjct: 128 AEVVYQVGEYYTPGHERGLRHDDPRLGLQWPLPVT---VISAKDAAWPLLTD 176
>gi|152964540|ref|YP_001360324.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Kineococcus radiotolerans
SRS30216]
gi|151359057|gb|ABS02060.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Kineococcus radiotolerans
SRS30216]
Length = 181
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ + D RG+F++++ + E GL Q N SF+ GT+RG+H Q P
Sbjct: 8 IEGVAIIELEERADDRGFFARSFCREEFLEAGLNPAVEQCNLSFNHKAGTLRGMHTQVDP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AKLVRC AG I DI VD+R +SPT V++E++A N +Y+P FAHG++TL
Sbjct: 68 APEAKLVRCTAGAIQDIIVDLRPDSPTRFQHVAVELTAANRRALYVPEYFAHGYLTLTDG 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
EV Y+V+ Y+ + G+ W D + + W + +S+KD + L
Sbjct: 128 AEVTYQVSQSYTPGTERGLRWDDPDLALPW---ARDVAVISDKDASWTLLAD 176
>gi|116074424|ref|ZP_01471686.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. RS9916]
gi|116069729|gb|EAU75481.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. RS9916]
Length = 195
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ F D RGWF ++++ + + G VF QDNHS S G +RGLH+Q P
Sbjct: 15 DGPLLIQPSVFGDDRGWFFESWNQQRFDDAVGSPVVFSQDNHSRS-SRGVLRGLHYQLAP 73
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLVR G +FD+AVD+R+ SPT+G WV E++A N Q++IP GFAHGF+TL
Sbjct: 74 QPQAKLVRVSLGAVFDVAVDLRQKSPTFGHWVGAELTAENKAQLWIPEGFAHGFLTLSEV 133
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQIDS 177
EV YK F++ + + + W D S+ ITWP+ S+S+KD + S
Sbjct: 134 AEVQYKARGFWNKDCERAIRWDDPSLAITWPVHQLKGTAVSLSDKDADAASFQAATS 190
>gi|24374673|ref|NP_718716.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella oneidensis MR-1]
gi|24349315|gb|AAN56160.1|AE015753_6 dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella oneidensis MR-1]
Length = 179
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF-----VQDNHSFSFDCGTIRGL 56
+ V I + + F D RG+F +T+ E L F VQDN+S S +RGL
Sbjct: 7 ELAEVLIFEPKVFGDERGFFMETFRQAYFTECLLSRGFEAPALVQDNYSRSQQH-VLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q + Q KLVR AG IFD+AVDIR S TYG WV +SA+N LQ++IP GFAHGF
Sbjct: 66 HYQ-LRHPQGKLVRVCAGSIFDVAVDIRPQSATYGKWVGRILSADNHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +V+Y+ +D+Y+ + + W I WPLL+ P +S +D N
Sbjct: 125 YVLSEYADVLYRCSDYYAPNDEYVLPWNSVQFAIDWPLLNE-TPILSARDANA 176
>gi|187476639|ref|YP_784662.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Bordetella avium 197N]
gi|115421225|emb|CAJ47730.1| dTDP-6-deoxy-D-glucose-3,5-epimerase [Bordetella avium 197N]
Length = 190
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 10/187 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE----LGLQDV--FVQDNHSFSFDCGTIRGL 56
+ V +L + F D+RGWF++ + + + LGL FVQ+NHS S G +RGL
Sbjct: 8 LPGVVLLDPKVFADARGWFAERFRQDVFEAGLRALGLPVPAPFVQENHSCSRQ-GVLRGL 66
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q P+AQ KLV G IFD+ VDIR +SPT+G W + +SA N ++IP G+AHGF
Sbjct: 67 HYQLAPHAQGKLVSVAVGEIFDVTVDIRPDSPTFGRWQGVTLSAVNRRSLWIPAGYAHGF 126
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
++L +EV YK T +YS H+ + W D + I WP + +SE+D+ P L +
Sbjct: 127 LSLSGPSEVHYKTTAYYSPAHERSLRWNDPFMGIVWP---AEVSLLSERDERAPGLQEAL 183
Query: 177 SPFEYDG 183
+ + DG
Sbjct: 184 ASGQLDG 190
>gi|187922882|ref|YP_001894524.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phytofirmans
PsJN]
gi|187714076|gb|ACD15300.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phytofirmans
PsJN]
Length = 183
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 64/156 (41%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F +++++K E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAKEFAEQVEPGVEFVQDNHSRSAK-GVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR + G +FD+AVDIR++SP +G W + +S +N Q+++P GFAHGF+ L
Sbjct: 68 QNAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWAGVVLSVDNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT 157
+ + +YK TD++ EH+ + W D +I I WP+ +
Sbjct: 128 SAQFLYKTTDYWYPEHERSIVWNDPAIGIEWPIDEE 163
>gi|108798038|ref|YP_638235.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. MCS]
gi|119867133|ref|YP_937085.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. KMS]
gi|126433699|ref|YP_001069390.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. JLS]
gi|108768457|gb|ABG07179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. MCS]
gi|119693222|gb|ABL90295.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. KMS]
gi|126233499|gb|ABN96899.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. JLS]
Length = 195
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + DSRG F + ++ + G + Q N S S G +RGLHF
Sbjct: 6 LAVPGAWEITPTVHADSRGSFMEWFTDREFTAFAGHRLDVRQANCSVS-RAGVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G +FD+AVDIR SPT+G W ++ + + IY+ G H F+ L
Sbjct: 65 AVPPGQAKYVTCVRGAVFDVAVDIRVGSPTFGRWDAVLLDDRDRRSIYLSEGLGHAFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ ++ V+Y + Y + V+ D ++ I WP + +S++D P L+Q
Sbjct: 125 QDDSTVMYLCSTGYDPAREHTVSPTDPALGIEWPFDGEL--VLSDRDAAAPTLDQA 178
>gi|325954731|ref|YP_004238391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Weeksella virosa DSM 16922]
gi|323437349|gb|ADX67813.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Weeksella virosa DSM 16922]
Length = 185
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I++ ++D RG+F ++++ +L E LG + FVQDN S S G +RGLH Q+
Sbjct: 8 LKGCFIIEPTVYQDKRGYFFESFNENILNEILGFRPHFVQDNQSQS-TYGVVRGLHLQQG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQAKLVR + G++ D+ VD+R+NS TYG S+E+S+ N Q++IP GF HGF L
Sbjct: 67 EHAQAKLVRVLEGKVLDVVVDVRKNSTTYGKSFSIELSSENNRQLFIPKGFLHGFSVLSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
YK FY + ++GV D + I W + + +SEKDQ ++
Sbjct: 127 RATFFYKCDQFYHKDSENGVYPLDIDLGIDWQIPTEDM-ILSEKDQAAQRFLDFNN 181
>gi|118595004|ref|ZP_01552351.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylophilales bacterium
HTCC2181]
gi|118440782|gb|EAV47409.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylophilales bacterium
HTCC2181]
Length = 182
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQ 59
++I V+IL + F+D RG F +T++ K E +D +FVQDN S S G +RGLH+Q
Sbjct: 6 LSIPEVKILDPKIFKDERGLFYETFNQKNFNEFVDEDAIFVQDNISQS-ISGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P+ Q KLV + G +FD+AVDIRR+S T+G +VS +SA N QI+IP GFAHGF+TL
Sbjct: 65 KSPFPQGKLVSVLQGEVFDVAVDIRRSSSTFGRYVSATLSAENKKQIWIPEGFAHGFLTL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V YK T+FYS + +AW D ++I WP D + S KD + D
Sbjct: 125 SDTALVYYKATNFYSPIDERCIAWNDSVLNINWPNKDRLFF--SAKDSLGKLFKEAD 179
>gi|313673123|ref|YP_004051234.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939879|gb|ADR19071.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 187
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ++I++T + D+RG F++ Y L E+ VQ NHS + GT+RGLHFQ PP
Sbjct: 12 IEGLKIVETASYIDTRGAFTRLYCECELAEIIGSRRIVQINHSCTQQVGTVRGLHFQYPP 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLVRC+ GR++D+AVD+R NSPT+ W + E++ NG I IP GFAHGF LE
Sbjct: 72 HAEMKLVRCLRGRVWDVAVDLRANSPTFLHWHAEELTPENGRMIIIPEGFAHGFQVLEAA 131
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+E++Y T +Y+ ++G + D + I WPL + +S +D N P L
Sbjct: 132 SELLYLHTAYYAPSAEAGFRYDDPCLGIKWPLPVSE---LSPRDANHPLLK 179
>gi|260590770|ref|ZP_05856228.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella veroralis F0319]
gi|260537256|gb|EEX19873.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella veroralis F0319]
Length = 184
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 68/181 (37%), Positives = 108/181 (59%), Gaps = 5/181 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V +++ + F D RG+F + + E G F+QDN S S G +RGLH+Q+
Sbjct: 7 EIEGVWVIEPKVFNDQRGYFFEAFKQAEFDEHIGHHVEFIQDNESKS-SFGVLRGLHYQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++QAKLVR I G++ D+AVD+R++SPT+G +V++E+S +N Q +IP GFAHGF+ L
Sbjct: 66 GEHSQAKLVRVIKGKVIDVAVDLRKSSPTFGKYVAVELSEDNKRQFFIPRGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN-QIDSPF 179
YKV + Y+ + ++ + W D+ + I W + + +SEKD N L+ + F
Sbjct: 126 DEAIFTYKVDNVYAPQSEASIRWNDEHVGIKWAIDPKDI-LLSEKD-NAKSLSWEAAEKF 183
Query: 180 E 180
E
Sbjct: 184 E 184
>gi|148557436|ref|YP_001265018.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingomonas wittichii RW1]
gi|148502626|gb|ABQ70880.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sphingomonas wittichii RW1]
Length = 182
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 73/171 (42%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ R+++ D RG F++T+ + + GL FVQ N S S GTIRG+H+QRPP
Sbjct: 8 LKDARLIEVEPRGDERGMFARTFCRQEFEAHGLLTDFVQQNMSVSAQAGTIRGMHYQRPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ +AKLVRC+ GRI D+ VD+R SPTY E+SA+N Q+Y+P GFAH F TL +
Sbjct: 68 FTEAKLVRCVRGRILDVIVDMRSGSPTYLRHEGFELSADNRRQLYVPPGFAHSFQTLVDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV Y VT Y+ + + GV + D + I+WPL T +S+KD P ++
Sbjct: 128 IEVSYLVTAPYTPDAEGGVRYSDPLLAISWPLPVTT---ISDKDAGWPLID 175
>gi|223937498|ref|ZP_03629402.1| dTDP-4-dehydrorhamnose 3,5-epimerase [bacterium Ellin514]
gi|223893849|gb|EEF60306.1| dTDP-4-dehydrorhamnose 3,5-epimerase [bacterium Ellin514]
Length = 182
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 6/174 (3%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V +LK R FED RG F +TY+ L +ELG+ ++ S S +RG+HFQ A
Sbjct: 15 VFVLKPRVFEDQRGSFVKTYNENLFEELGIPFKPREEFFSVSHK-NVVRGMHFQLVGAAH 73
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
KLV C G++ D+ VD+R+ S YG +S E+S +N ++IP GFAHGF+ LE NT +
Sbjct: 74 DKLVYCPLGKVLDVVVDLRKWSKNYGKTMSRELSGSNREMLFIPVGFAHGFLALEDNTMM 133
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+Y+ + +S +HD+G W S WP+ + P +S++D+ P L SPF
Sbjct: 134 VYQTSTVHSPQHDAGFLWN--SFGFDWPVQN---PILSDRDKAFPALKDFQSPF 182
>gi|255530275|ref|YP_003090647.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pedobacter heparinus DSM
2366]
gi|255343259|gb|ACU02585.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pedobacter heparinus DSM
2366]
Length = 184
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 66/150 (44%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + +++ + ++D+RG+F ++Y++KL E G+ FVQDN SFS G +RG+H Q PP
Sbjct: 8 LAGLLVIEPKVWKDNRGYFYESYNAKLFAEAGISANFVQDNQSFSQK-GALRGMHAQSPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G ++DIAVDIR+ SPTYG +E+S+ N Q+++P GF HGF+TLE
Sbjct: 67 FEQGKLVRVLQGAVWDIAVDIRKASPTYGQHFGVELSSENHKQLWVPPGFLHGFLTLEDQ 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITW 152
T YKV+++Y + GV W D ++I W
Sbjct: 127 TIFTYKVSNYYDKASEIGVMWNDPDLNINW 156
>gi|271962204|ref|YP_003336400.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptosporangium roseum DSM
43021]
gi|270505379|gb|ACZ83657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptosporangium roseum DSM
43021]
Length = 216
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ R D RG F ++Y + L+E +G + Q N S S G +RG+HF
Sbjct: 4 LSIDGTWCHTPRIHADPRGSFLESYRAADLEESVGHRLDLAQVNCSVSRR-GVLRGIHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C++G + D+ VDIR SPT+G W ++ + + +Y+ G HGF+TL
Sbjct: 63 DVPPGQAKYVTCVSGAVLDVVVDIRVGSPTFGRWETVLLDDESRRGLYVAEGLGHGFLTL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V+Y + ++ + G+ D ++ I WP + P +S+KD P L +
Sbjct: 123 SEQATVVYLCSRPFTPGREHGIHPLDPALGIDWP--AGVEPLLSDKDAAAPTLKEA 176
>gi|71065772|ref|YP_264499.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychrobacter arcticus 273-4]
gi|71038757|gb|AAZ19065.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Psychrobacter arcticus 273-4]
Length = 190
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 114/179 (63%), Gaps = 7/179 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL----KELGLQ-DVFVQDNHSFSFDCGTIRGL 56
I + IL+ R FED RGWF ++++ K E G + FVQDNHS S G +RGL
Sbjct: 7 KIPELLILEPRVFEDDRGWFMESFNHKSFTTLLNERGFEAPNFVQDNHS-SSQKGALRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q P+AQAKLVR + GR +D+AVDIR++SPT+G WV +E++A N Q +IP GFAHGF
Sbjct: 66 HYQLNPFAQAKLVRVVQGRAWDVAVDIRQHSPTFGQWVGIELTATNHRQFWIPAGFAHGF 125
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ LE NT+ +YK T +Y E + + W D S+DI WP+ + + ++EKD Q
Sbjct: 126 IALEDNTQFLYKTTSYYHKESERTILWNDDSLDINWPV-EGLELKLTEKDHQGATFTQA 183
>gi|158521972|ref|YP_001529842.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfococcus oleovorans
Hxd3]
gi|158510798|gb|ABW67765.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfococcus oleovorans
Hxd3]
Length = 191
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 112/186 (60%), Gaps = 8/186 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ + +++ ++ D+RG+ + + ++ L G Q NH+++ GT+RG+HFQR
Sbjct: 14 LPLSGLCLVQRKRMGDARGFLERLFCAEELTRAGWDGPIAQINHTYTAAAGTLRGMHFQR 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+A+ KLV C+ GR+FD+AVD R+ SPT+ W ++ + IP GFAHGF TL
Sbjct: 74 PPHAEKKLVMCLKGRVFDVAVDTRKGSPTFLKWHGEILAPEAANALLIPEGFAHGFQTLT 133
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ E++Y + Y+ +H+ G+ QD +I+I WP L ++S++DQ PFL
Sbjct: 134 DDVEMLYCHSAVYAPDHEGGLHPQDPAINIQWP---DELVTLSDRDQGHPFLGD-----S 185
Query: 181 YDGLPL 186
++G+ L
Sbjct: 186 FEGVAL 191
>gi|170290461|ref|YP_001737277.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174541|gb|ACB07594.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 180
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I + ++ F DSRG+F++ Y G+ FVQ N S+S G +RGLH+Q
Sbjct: 9 LEIPDLLLIDHVLFPDSRGFFTELYKKSDFTGNGIPHDFVQVNLSYS-RKGVVRGLHYQL 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q KLV I+G++FD+AVDIRR S +G +VS+ + ++IP GFAHGF LE
Sbjct: 68 KPMEQGKLVYVISGKVFDVAVDIRRGSKWFGRYVSVLLEPGL--ALWIPPGFAHGFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T +Y VT YS +H+ + W D+ I I WPL + +SE+D P L ++ F
Sbjct: 126 D-TYFLYLVTKEYSPQHERCIKWDDQEIGIEWPLKE---AVLSERDSKCPPLKSCETNF 180
>gi|117919840|ref|YP_869032.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. ANA-3]
gi|117612172|gb|ABK47626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. ANA-3]
Length = 178
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQD-VFVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ E GL+ VQDN S S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSFFSECLKSRGLKVQELVQDNFSRSQQH-VLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q + Q KLVR AG IFD+AVDIR S TYG WV +SA+N LQ++IP FAHGF
Sbjct: 66 HYQ-REHPQGKLVRVCAGSIFDVAVDIRPQSKTYGKWVGRVLSADNHLQMWIPPSFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +V+Y+ TD+Y+ + + +AW I WPLL+ P +SE+D
Sbjct: 125 YVLSEYADVLYRCTDYYAPDDEYVLAWNSAEFAIDWPLLNE-TPILSERDAAA 176
>gi|6688599|emb|CAB65208.1| RmlC protein [Legionella pneumophila]
Length = 188
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ ++I++ + + D RG+F +++ +K +E LG+ D FVQDN S + + +
Sbjct: 8 IDELKIIEPKIYGDERGFFYESFQAKRYEELLGITDRFVQDNFSK-ITKRCTKEVCIIKV 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLV +AG +FD+AVDIR SPT+G WV + +S N Q +IP GFAHGF L
Sbjct: 67 NKTQGKLVSVLAGEVFDVAVDIRLGSPTFGQWVGVILSGENKRQFWIPKGFAHGFYVLSA 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ YK TD+Y E + + + D + I WPL +S KD LN ID+
Sbjct: 127 MADFAYKCTDYYHPESEFSIHYLDPQLAIDWPL--GEQVQLSPKDAAAKLLNLIDA---- 180
Query: 182 DGLPLLSL 189
+ LP
Sbjct: 181 ELLPRYQA 188
>gi|251781241|ref|ZP_04824157.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243081688|gb|EES47749.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 195
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V +++ F+D +G+ ++ Y+ K + G+ +FVQ+ S G ++G+HFQ+
Sbjct: 8 KIDGVYVIEPGVFKDEKGYCTEMYNKKQFLKAGINMIFVQEFEFESKK-GMLKGIHFQKQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q L++ G F +AVD+R S T+G W S ++ N Q+YIP GFAHGF+TL
Sbjct: 67 NN-QGSLIKVTKGEGFIVAVDLRYGSTTFGKWESFILNEENKKQVYIPEGFAHGFLTLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK T+ Y E + G+ W D I+I WPL +SEKD+ P ++
Sbjct: 126 EATFNYKCTEIYDPEDNWGIMWNDPDINIKWPLEKIENVILSEKDKLYPRFKDLN 180
>gi|110597157|ref|ZP_01385446.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium ferrooxidans DSM
13031]
gi|110341348|gb|EAT59813.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Chlorobium ferrooxidans DSM
13031]
Length = 177
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ + +++ R + D RG+F +TY ++ G+ D F+QDN S S G +RG+HFQ
Sbjct: 8 LDGLYVIEPRCYTDDRGFFLETYQETRYRKAGIADKFLQDNQSRSVK-GVLRGMHFQVKR 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QA+L+ + G I+D+ VDIR S T+G W E+S QIY+ GFAHGF
Sbjct: 67 -PQAQLLTVLRGHIYDVCVDIRPASSTFGQWFGAELSDIGPRQIYMSPGFAHGFYVFSDW 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++ YKVT Y + G+ W D + I WP+ P ++ +D + P L +
Sbjct: 126 ADLHYKVTCEYDAGDEGGLFWNDPDVGIKWPM---NSPIITPRDASYPRLKDL 175
>gi|15828066|ref|NP_302329.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae TN]
gi|221230543|ref|YP_002503959.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae Br4923]
gi|4539119|emb|CAB39840.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium
leprae]
gi|13093620|emb|CAC30920.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae]
gi|219933650|emb|CAR72062.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae Br4923]
Length = 202
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ + DSRG F + ++ G + Q N S S G +RGLHF
Sbjct: 6 LDISGAWEITPTIHSDSRGMFFEWLTASRFSAFTGHRLDVRQANCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G +FD+ VDIR SPT+GCW S+ ++ +N IYI AHGF+ L
Sbjct: 65 QVPPSQAKYVTCVTGSVFDVVVDIRLGSPTFGCWTSITLNDSNRKTIYISESLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + D + I WP++D + +S++D P L+ I
Sbjct: 125 QDNSTVMYLCSAEYNPAREHAICATDPDLAIDWPVVDGVDTHLSKRDATAPNLDDI 180
>gi|114046910|ref|YP_737460.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. MR-7]
gi|113888352|gb|ABI42403.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. MR-7]
Length = 180
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-----DVFVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ E VQDN S S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSFFSECLKNRGLDALELVQDNFSRSQQH-VLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q Y Q KLVR AG IFD+AVDIR S TYG WV +SA+N LQ++IP GFAHGF
Sbjct: 66 HYQC-KYPQGKLVRVCAGSIFDVAVDIRPQSGTYGKWVGRVLSADNHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +VIY+ TD+Y+ + + +AW I WP+ + P +SE+D
Sbjct: 125 YVLSEYADVIYRCTDYYAPDDEYVLAWNSAEFAIDWPVHNE-PPILSERDAKA 176
>gi|329667487|gb|AEB93435.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus johnsonii DPC
6026]
Length = 202
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + + G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQS-SSTKGVLRGLHFQ-KK 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R +S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQIKLVRAVRGSVFDVAVDLRSDSKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++S++D
Sbjct: 131 AEFCYKVNDFWHQNDEGGMAWNDPEIGIEWPHLKGDYPGSPDASGYTLDDGTKLTLSDRD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|17550412|ref|NP_509046.1| hypothetical protein C14F11.6 [Caenorhabditis elegans]
gi|1049348|gb|AAA80364.1| Hypothetical protein C14F11.6 [Caenorhabditis elegans]
Length = 190
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++K + F D RG+FS++Y+ E +Q ++ G +RGLH Q
Sbjct: 20 IPDLLVIKPKVFPDERGFFSESYNKTEWAEKIGYTEDLQQDNHSFSHYGVLRGLHTQPH- 78
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV ++G IFD+AVDIR++SPTYG W + ++ +N +IP GF HGF L
Sbjct: 79 --MGKLVTVVSGEIFDVAVDIRKDSPTYGKWHGVVLNGDNKHAFWIPAGFLHGFQVLSKE 136
Query: 123 -TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
V YK + Y + + G+ D+ I++ WP+ D + VSE+D
Sbjct: 137 GAHVTYKCSAVYDPKTEFGINPFDEDINVDWPIRDKTVVIVSERDTQHASFK 188
>gi|146278214|ref|YP_001168373.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides ATCC
17025]
gi|145556455|gb|ABP71068.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides ATCC
17025]
Length = 177
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ ED RGWF +T+ + + + GL FVQ N S++ GT+RG+H+QR P
Sbjct: 8 LKDAVLIEAEPREDHRGWFERTFCEEEMAKAGLATRFVQHNSSYNHAVGTLRGMHYQRSP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ K++ C GRI D+ +D+R +SPTY W ++ A + Q+YIP GFAHG++TLE
Sbjct: 68 HAEVKVITCTRGRIHDVIIDLRPDSPTYMKWEGFDLRAGDHRQLYIPEGFAHGYLTLEDA 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
T V Y V+ Y+ + GV W D + I W + +SEKD P
Sbjct: 128 TAVSYLVSTAYTPGAEGGVRWDDPTFGIAW---AGGVSVISEKDAAWP 172
>gi|325268092|ref|ZP_08134738.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Kingella denitrificans ATCC
33394]
gi|324980477|gb|EGC16143.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Kingella denitrificans ATCC
33394]
Length = 182
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V+ + F DSRG+F +T+ E + FVQ+NHS S G +RGLH+Q
Sbjct: 8 LPDVKRIDPHIFRDSRGFFMETFRHDWFCEHVAERAFVQENHSQSHQ-GVLRGLHYQ-TE 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQ KLVR AGR+FD+AVD+R++SPT+G W + +SA NG Q+++P GFAHGF L+
Sbjct: 66 NAQGKLVRVTAGRVFDVAVDMRQDSPTFGQWAAEILSAENGRQLWLPEGFAHGFYVLDGP 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
++Y+ TD+++ + + W D + ITWPL P +S KD Q+
Sbjct: 126 ATLLYRCTDYHNPSAEQTLRWDDPHVGITWPLQG--APLLSPKDAQGQDWAQVPK 178
>gi|113969681|ref|YP_733474.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. MR-4]
gi|113884365|gb|ABI38417.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. MR-4]
Length = 180
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 8/173 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQ-DVFVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ E GL+ VQDN+S S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSYFTECFQSRGLKAPELVQDNYSRSQQH-VLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q + Q KLVR AG IFD+AVDIR S TYG WV +SA+N LQ++IP GFAHGF
Sbjct: 66 HYQC-KHPQGKLVRVCAGSIFDVAVDIRPQSETYGKWVGRVLSADNHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +VIY+ TD+Y+ + + +AW I WPL + P +SE+D
Sbjct: 125 YVLSEYADVIYRCTDYYAPDDEYVLAWNSAEFAIDWPLRNE-PPILSERDAKA 176
>gi|325673208|ref|ZP_08152901.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
gi|325556043|gb|EGD25712.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
Length = 209
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I+ + ++F D RG F + + E + +Q + G +RG+HF
Sbjct: 8 LAISGAWEVTPKQFGDDRGVFLEWFKEPTFSEAVGHPLDLQQANCSVSAAGVLRGIHFAD 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V C+ G + D+ VDIR SPT+G W S+ + + +Y+ G H F++LE
Sbjct: 68 VPPGQAKYVTCLKGAVLDVVVDIRVGSPTFGKWDSVLLDDVDRRAVYLSEGLGHAFLSLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILP---SVSEKDQNLPFLNQI 175
++ V+Y + Y+ + G+ D +I I WP L + P +SEKD P L +
Sbjct: 128 DSSTVVYLCSSGYAPGREHGINPLDPAIGIEWPKLSRSGQPLEFVLSEKDCEAPSLAEA 186
>gi|308390302|gb|ADO32600.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Kitasatospora
kifunensis]
Length = 199
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + ++ D RG F + Y L+E+ G Q N S S +RG+HF
Sbjct: 6 LSIPGAFEVTPQQHGDPRGLFMEWYRFDRLEEVVGHPLRLAQGNLSVSAK-DVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VD+R SP +G W + + +YIP G HGF L
Sbjct: 65 DVPPGQAKYVSCVRGAVLDVVVDLRVGSPAFGKWEFVRLDDTERKSVYIPEGVGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y ++ Y+ + V D + I WP P +S +D P L +
Sbjct: 125 TDDATLSYVCSETYNPTGEHAVHPLDPDLGIEWP---ADAPQLSARDAAAPTLAEA 177
>gi|187927734|ref|YP_001898221.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12J]
gi|187724624|gb|ACD25789.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia pickettii 12J]
Length = 184
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 69/161 (42%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V IL+ + + DSRG+F ++++ + + L G+ FVQDNHS S G +RG+H+Q
Sbjct: 10 LPGVLILEPKVYGDSRGFFFESFNGREFETLTGVSTPFVQDNHSMSRK-GVLRGMHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR I+G +FD+AVD+R++S T+G W + +SA N Q+++P GFAHGF+ L
Sbjct: 68 EHAQGKLVRVISGEVFDVAVDLRKSSSTFGKWAGVRLSAENKRQLWVPPGFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSV 162
E +YK TD++ EH+ V W D +I I WPL P +
Sbjct: 128 TAEFLYKTTDYWYPEHERSVVWNDPTIAIDWPLA-GAEPIL 167
>gi|269794231|ref|YP_003313686.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sanguibacter keddieii DSM
10542]
gi|269096416|gb|ACZ20852.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sanguibacter keddieii DSM
10542]
Length = 204
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + ++F D RG F + + +E G Q N S S G +RG+HF
Sbjct: 6 LSVPGAWEITPKQFGDPRGVFLEWFKGAPFAEEAGHALALAQANLSVSAA-GVLRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G + D+ VDIR SPTYG W S+ + + IY+ G H F++L
Sbjct: 65 DVPPGQAKYVTCARGAVLDVVVDIRVGSPTYGQWDSVLLDDVDRRAIYLSEGLGHAFLSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQI 175
E ++ V+Y + Y+ + G+ D I I WP + +SEKD P L +
Sbjct: 125 EDDSTVLYLCSAPYAPGREHGIHPLDPEIGIDWPTTARDGSPLQYELSEKDSVAPTLAEA 184
>gi|158312645|ref|YP_001505153.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EAN1pec]
gi|158108050|gb|ABW10247.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EAN1pec]
Length = 189
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V I+ F D RG F++T+ + GL+ Q + +++ GTIRGLH+ P
Sbjct: 8 IDGVTIVDVEAFSDDRGLFARTFCQEEFAAAGLEVAVAQCSVAYNRRAGTIRGLHWAGEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ KLVRC G + D+ VD R S TY V++E++A+N ++I G AHG+ TL +
Sbjct: 68 VRETKLVRCTRGALLDVIVDSRPGSATYLEHVAVELTADNHRALFIAAGLAHGYQTLVDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
TE Y++ ++ HD G+ + D + I WPL + +SEKD+ P L
Sbjct: 128 TEATYQMNVPFTPGHDRGLRFDDPRLGIAWPLP---VSVISEKDRGWPLL 174
>gi|187934909|ref|YP_001887609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum B str.
Eklund 17B]
gi|187723062|gb|ACD24283.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum B str.
Eklund 17B]
Length = 195
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +++ F+D +G+ ++ Y+ K + G+ +FVQ+ S G ++G+HFQ
Sbjct: 8 KMDGVYVIEPGVFKDEKGYCTEMYNKKQFLKAGINMIFVQEFEFESKK-GMLKGIHFQ-K 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q L++ G F +AVD+R S T+G W S ++ N Q+YIP GFAHGF+TL
Sbjct: 66 QHNQGSLIKVTKGEGFIVAVDLRYGSLTFGKWESFILNEENKKQVYIPEGFAHGFLTLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK T+FY E + G+ W D I+I WPL +SE+D+ P ++
Sbjct: 126 EAIFNYKCTEFYDPEDNGGIMWNDPDINIKWPLEKIENVILSERDKLYPRFKDLN 180
>gi|296163282|ref|ZP_06846044.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. Ch1-1]
gi|295886464|gb|EFG66320.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. Ch1-1]
Length = 183
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/156 (41%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F +++++K E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAKEFAEQVEPGAEFVQDNHSRSAK-GVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVR + G +FD+AVDIR++SP +G W + +S +N Q+++P GFAHGF+ L
Sbjct: 68 QNAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWAGVVLSVDNHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT 157
+ + +YK TD++ EH+ + W D +I I WP+ D
Sbjct: 128 SAQFLYKTTDYWYPEHERSIVWNDPTIGIGWPIDDE 163
>gi|117620166|ref|YP_857409.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561573|gb|ABK38521.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 187
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 113/182 (62%), Gaps = 5/182 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + + R F D RG+F ++++ KL ++ G FVQDNHS S G +RGLH+Q
Sbjct: 7 ELPDILLFEPRVFSDERGFFFESFNHKLFEDAVGYPVTFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRCI G IFD+AVDIR++SPT+G WV +S N Q++IP GFAHGF+T
Sbjct: 66 PPHAQGKLVRCIIGEIFDVAVDIRKSSPTFGRWVGAHLSDTNKRQLWIPEGFAHGFITRT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
EV+YK T++Y + ++ + W D+ + I W + +LP +S KD + F
Sbjct: 126 ETAEVLYKATNYYQPDFENSICWNDQQLSIKW--DNDMLPVLSRKDASAKSFMMAK-KFN 182
Query: 181 YD 182
Y+
Sbjct: 183 YN 184
>gi|260436113|ref|ZP_05790083.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 8109]
gi|260413987|gb|EEX07283.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 8109]
Length = 196
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 4/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + ++ + F D RGWF ++++ + E G +F QDNHS S G +RGLH+Q
Sbjct: 12 LVLQGPLLITPQAFGDDRGWFYESWNQRKFDEAVGESVLFSQDNHSRSVQ-GVLRGLHYQ 70
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAKLVR G I+D+AVDIRR+SPT+G WV +E+SA+N Q++IP GFAHGF+TL
Sbjct: 71 LAPEPQAKLVRATVGVIYDVAVDIRRHSPTFGTWVGVELSADNKCQLWIPEGFAHGFLTL 130
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQID 176
EV YK F++ + + W D + I WP+ S+S KD +
Sbjct: 131 SDVAEVQYKARGFWNKSCERAILWNDPDLAIAWPIDQLQGAEVSLSGKDAEAAGFKVAE 189
>gi|329851012|ref|ZP_08265769.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Asticcacaulis
biprosthecum C19]
gi|328839858|gb|EGF89430.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Asticcacaulis
biprosthecum C19]
Length = 175
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V ++++ D RG F +T+ GL +Q++ S + T+RG+H Q P
Sbjct: 8 IDGVVVVESESAADDRGSFVRTWCRDTFAAAGLDFEPIQESLSRNLKTATLRGMHIQGAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + KLVRC+ GRIFD+AVD+R +S +Y W LE+ + +++P G AHGF+TL +
Sbjct: 68 FGEQKLVRCLRGRIFDVAVDLRPDSASYCRWFGLELDESRDAALFLPRGVAHGFITLSDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
V Y + Y+ H GV W D + I WP +S++D+N P
Sbjct: 128 AWVHYMIDTAYAPGHAGGVRWDDPAFGIAWPTEP---VVISDRDRNWP 172
>gi|294138870|ref|YP_003554848.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella violacea DSS12]
gi|293325339|dbj|BAJ00070.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella violacea DSS12]
Length = 181
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++L R ED RG F +T+ ++ FVQ+NHS S G +RGLHFQ P
Sbjct: 8 IADLKLLSPRVHEDERGCFCETFRDSWFRQQIADVTFVQENHSRSIK-GCLRGLHFQ-SP 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+Q KL+R + G IFD+AVD+R++SP+ G W +SA N Q+++P GFAHGF +
Sbjct: 66 RSQGKLIRVVVGEIFDVAVDLRKHSPSLGQWFGTYLSAKNRQQMWLPAGFAHGFYVTSDS 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E+IYK TD+Y+ E + + W D ++ I WPL LP +S KD+ + I
Sbjct: 126 AEIIYKCTDYYAPEFEKTLTWDDDTLAIDWPLR-GQLPILSSKDKIGLSFDDI 177
>gi|148238439|ref|YP_001223826.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 7803]
gi|147846978|emb|CAK22529.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 7803]
Length = 205
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 13/186 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK----ELGLQ------DVFVQDNHSFSFDCGT 52
+ ++ R F D RG+F ++++ + + E G+ VF QDNHS S G
Sbjct: 14 LPGPLLITPRVFADERGFFYESWNERRFRAELIEAGVPAAEAEALVFRQDNHSRSSR-GV 72
Query: 53 IRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGF 112
+RGLH+Q PP Q KLVRC G IFD+AVD+RR SPTYG WV E+SA N Q+++P GF
Sbjct: 73 LRGLHYQLPPEPQGKLVRCSLGAIFDVAVDLRRASPTYGQWVGAELSAANHQQLWVPVGF 132
Query: 113 AHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLP 170
AHGF+TL EV YK + F++ + + + W D ++ I WPL P ++ KD + P
Sbjct: 133 AHGFLTLTDVAEVQYKASGFWNRDCERSLRWDDSALAIAWPLEQAGVSEPLLAPKDADAP 192
Query: 171 FLNQID 176
L +D
Sbjct: 193 LLASLD 198
>gi|226363369|ref|YP_002781151.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus opacus
B4]
gi|226241858|dbj|BAH52206.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus opacus
B4]
Length = 193
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + R+F D RG F + + + G Q N S S G +RG+H+
Sbjct: 6 LKVPGAWEITPRQFGDDRGVFLEWFKGSEFEAAVGHPLDLAQANCSVSAA-GVLRGIHYT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G D+ VD+R SP +G W S+ I + +Y+P G H ++L
Sbjct: 65 DNPPGQAKYVTCVKGAFLDVIVDLRVGSPMFGQWDSVLIDDVDRRAVYLPAGVGHAILSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E + V+Y + Y+ D + D + I WP + + +SEKD P L Q
Sbjct: 125 EDASTVMYLCSIEYTPALDHDLHPLDPDLGIDWPTVGRDGSPLTFQLSEKDSAAPSLQQA 184
>gi|209967017|ref|YP_002299932.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Rhodospirillum
centenum SW]
gi|209960483|gb|ACJ01120.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Rhodospirillum
centenum SW]
Length = 177
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V ++ D RG F++ + + GL F Q + SF+ GT+RGLHFQ PP
Sbjct: 8 IPGVTVVDLEPIRDRRGHFARCFCADAFAARGLPTDFPQHSLSFNAVAGTVRGLHFQLPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + KL+RC G IFD+AVD+R SPT+ WV +E+SA+ G +YIP G AHGF TL
Sbjct: 68 HGEPKLIRCTRGAIFDVAVDLRPESPTWRQWVGIELSASTGRALYIPPGLAHGFQTLTDE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
TEV+Y + + E G W D + I WPL T +SE+D + P
Sbjct: 128 TEVLYMMGVRFVPEAARGYRWNDPAFGIDWPLPPT---LISERDLSFPDFA 175
>gi|215405504|ref|ZP_03417685.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
02_1987]
gi|289747298|ref|ZP_06506676.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium
tuberculosis 02_1987]
gi|289687826|gb|EFD55314.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium
tuberculosis 02_1987]
Length = 202
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 6 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 65 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ + WPL++ PS+S++D P +
Sbjct: 125 QDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVNGAAPSLSDRDAAAPSFEDV 180
>gi|88808162|ref|ZP_01123673.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 7805]
gi|88788201|gb|EAR19357.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 7805]
Length = 195
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++ R F D RGWF ++++ + + G VF QDNHS S G +RGLH+Q
Sbjct: 14 IAGPLLISPRAFGDERGWFFESWNQRKFDEAAGETVVFSQDNHSRS-VQGVLRGLHYQLA 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLVR G IFD+AVDIR+ S T+G WV +SA N Q+++P GFAHGF+TL
Sbjct: 73 PEPQGKLVRASIGEIFDVAVDIRQGSATFGQWVGAHLSAENKQQLWVPEGFAHGFLTLSP 132
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQID 176
EV YK F++ E + + W D SI+I WPL S+S KD + L+Q
Sbjct: 133 VAEVQYKARGFWNKECERAIVWNDASINIQWPLDQLGGAEVSLSGKDADAASLDQAK 189
>gi|296130190|ref|YP_003637440.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas flavigena DSM
20109]
gi|296022005|gb|ADG75241.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas flavigena DSM
20109]
Length = 210
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ + ++ D RG F + + E +Q + G +RG+HF
Sbjct: 6 LSVPGAWEITPKQHGDPRGVFLEYFKGGPFAEATGHAFDLQQANCSVSAAGVLRGIHFAD 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V C G + D+ VDIR SPT+G W ++ + + IY+ G H FM+LE
Sbjct: 66 VPPGQAKYVTCAKGAVLDVVVDIRVGSPTFGRWDTVLLDDTDRRAIYLGEGLGHAFMSLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQI 175
++ V+Y + Y+ + G+ D I ITWP + P +SEKD P L +
Sbjct: 126 DDSTVLYLCSTGYAPGREHGIHPLDPEIGITWPTTARDGSPLTPQLSEKDTAAPTLAEA 184
>gi|215447804|ref|ZP_03434556.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
T85]
gi|289759628|ref|ZP_06519006.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium
tuberculosis T85]
gi|294995761|ref|ZP_06801452.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
210]
gi|289715192|gb|EFD79204.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium
tuberculosis T85]
gi|326905311|gb|EGE52244.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis W-148]
Length = 202
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 6 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 65 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSDGLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ + WPL+D PS+S++D P +
Sbjct: 125 QDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV 180
>gi|218755244|ref|ZP_03534040.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis GM
1503]
gi|289763647|ref|ZP_06523025.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis GM
1503]
gi|289711153|gb|EFD75169.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis GM
1503]
Length = 205
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 6 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 65 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ + WPL+D PS+S++D P +
Sbjct: 125 QDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV 180
>gi|15610601|ref|NP_217982.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium
tuberculosis H37Rv]
gi|15843060|ref|NP_338097.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
CDC1551]
gi|31794641|ref|NP_857134.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium bovis
AF2122/97]
gi|121639385|ref|YP_979609.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148663330|ref|YP_001284853.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
H37Ra]
gi|167966768|ref|ZP_02549045.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
H37Ra]
gi|215413379|ref|ZP_03422063.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
94_M4241A]
gi|215428972|ref|ZP_03426891.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
T92]
gi|215432435|ref|ZP_03430354.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
EAS054]
gi|219559533|ref|ZP_03538609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
T17]
gi|224991881|ref|YP_002646570.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800510|ref|YP_003033511.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis KZN 1435]
gi|254234056|ref|ZP_04927381.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis C]
gi|254366066|ref|ZP_04982111.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
str. Haarlem]
gi|254552569|ref|ZP_05143016.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260188520|ref|ZP_05765994.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis CPHL_A]
gi|260202648|ref|ZP_05770139.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis T46]
gi|289445065|ref|ZP_06434809.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
T46]
gi|289449169|ref|ZP_06438913.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis CPHL_A]
gi|289555735|ref|ZP_06444945.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis KZN 605]
gi|289571698|ref|ZP_06451925.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis T17]
gi|289752189|ref|ZP_06511567.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis T92]
gi|289755598|ref|ZP_06514976.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
EAS054]
gi|297636124|ref|ZP_06953904.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
KZN 4207]
gi|297733124|ref|ZP_06962242.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
KZN R506]
gi|298526949|ref|ZP_07014358.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis 94_M4241A]
gi|306777813|ref|ZP_07416150.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu001]
gi|306782531|ref|ZP_07420868.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu002]
gi|306786350|ref|ZP_07424672.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu003]
gi|306790719|ref|ZP_07429041.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu004]
gi|306795248|ref|ZP_07433550.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu005]
gi|306799437|ref|ZP_07437739.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu006]
gi|306805284|ref|ZP_07441952.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu008]
gi|306809469|ref|ZP_07446137.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu007]
gi|306969577|ref|ZP_07482238.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu009]
gi|306973931|ref|ZP_07486592.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu010]
gi|307081640|ref|ZP_07490810.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu011]
gi|307086246|ref|ZP_07495359.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu012]
gi|313660455|ref|ZP_07817335.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
KZN V2475]
gi|81668709|sp|O06330|RMLC_MYCTU RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|40889319|pdb|1PM7|A Chain A, Rmlc (Dtdp-6-Deoxy-D-Xylo-4-Hexulose 3,5-Epimerase)
Structure From Mycobacterium Tuberculosis And Inhibitor
Design. The Apo Structure.
gi|40889320|pdb|1PM7|B Chain B, Rmlc (Dtdp-6-Deoxy-D-Xylo-4-Hexulose 3,5-Epimerase)
Structure From Mycobacterium Tuberculosis And Inhibitor
Design. The Apo Structure.
gi|118138539|pdb|2IXC|A Chain A, Rmlc M. Tuberculosis With Dtdp-Rhamnose
gi|118138540|pdb|2IXC|B Chain B, Rmlc M. Tuberculosis With Dtdp-Rhamnose
gi|118138541|pdb|2IXC|C Chain C, Rmlc M. Tuberculosis With Dtdp-Rhamnose
gi|118138542|pdb|2IXC|D Chain D, Rmlc M. Tuberculosis With Dtdp-Rhamnose
gi|2104388|emb|CAB08731.1| dTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE RMLC
(dTDP-4-KETO-6-DEOXYGLUCOSE 3,5-EPIMERASE)
(dTDP-L-RHAMNOSE SYNTHETASE) (THYMIDINE
DIPHOSPHO-4-KETO-RHAMNOSE 3,5-EPIMERASE) [Mycobacterium
tuberculosis H37Rv]
gi|13883404|gb|AAK47911.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
CDC1551]
gi|31620238|emb|CAD95681.1| PROBABLE DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE RMLC
(DTDP-4-KETO-6-DEOXYGLUCOSE 3,5-EPIMERASE)
(DTDP-L-RHAMNOSE SYNTHETASE) (THYMIDINE
DIPHOSPHO-4-KETORHAMNOSE 3,5-EPIMERASE) [Mycobacterium
bovis AF2122/97]
gi|121495033|emb|CAL73519.1| Probable dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124599585|gb|EAY58689.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis C]
gi|134151579|gb|EBA43624.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
str. Haarlem]
gi|148507482|gb|ABQ75291.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
H37Ra]
gi|224774996|dbj|BAH27802.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253322013|gb|ACT26616.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis KZN 1435]
gi|289417984|gb|EFD15224.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
T46]
gi|289422127|gb|EFD19328.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis CPHL_A]
gi|289440367|gb|EFD22860.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis KZN 605]
gi|289545452|gb|EFD49100.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis T17]
gi|289692776|gb|EFD60205.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis T92]
gi|289696185|gb|EFD63614.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis
EAS054]
gi|298496743|gb|EFI32037.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis 94_M4241A]
gi|308213897|gb|EFO73296.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu001]
gi|308324848|gb|EFP13699.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu002]
gi|308329102|gb|EFP17953.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu003]
gi|308332910|gb|EFP21761.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu004]
gi|308336570|gb|EFP25421.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu005]
gi|308340445|gb|EFP29296.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu006]
gi|308344309|gb|EFP33160.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu007]
gi|308348200|gb|EFP37051.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu008]
gi|308352924|gb|EFP41775.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu009]
gi|308356767|gb|EFP45618.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu010]
gi|308360712|gb|EFP49563.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu011]
gi|308364327|gb|EFP53178.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis SUMu012]
gi|323717949|gb|EGB27138.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis CDC1551A]
gi|328460241|gb|AEB05664.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis KZN 4207]
Length = 202
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 6 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 65 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ + WPL+D PS+S++D P +
Sbjct: 125 QDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV 180
>gi|226303737|ref|YP_002763695.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus
erythropolis PR4]
gi|226182852|dbj|BAH30956.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus
erythropolis PR4]
Length = 197
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + ++F D RG F + + E+ + + +Q + G +RG+HF
Sbjct: 7 LKVPGAWEFTPKQFGDDRGVFLEWFREPGFSEITGRTLDLQQANCSVSAAGVLRGIHFAD 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V C+ G I DIAVD+R SPT+G W S+ + + I++ G H F++LE
Sbjct: 67 VPPGQAKYVTCVKGAILDIAVDLRVGSPTFGQWDSVLLDDVDRRAIFLSEGLGHAFLSLE 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQID 176
N+ V+Y + Y+ E + V D I I WP + + + ++S KD P L
Sbjct: 127 DNSTVVYLCSTGYAPEREHEVHPLDPDIAIDWPTVGRSGEPLNITLSAKDTAAPSLQDAV 186
Query: 177 S 177
S
Sbjct: 187 S 187
>gi|306840751|ref|ZP_07473499.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. BO2]
gi|306289257|gb|EFM60504.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. BO2]
Length = 174
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI+ ++ + +D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q
Sbjct: 6 LNIDGAWSIEPERLKDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQS 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ + KLV C+ G ++D+ VD+R +SPTY W +E+SA NG Q+YIP G AHGF TL
Sbjct: 66 EPHCETKLVTCLQGIVWDVLVDLRPHSPTYRRWAGVELSAENGAQLYIPEGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + Y ++ Y+ +H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 126 DDVLIRYMISKPYAPDHAAGIRYDDPALDIPWPDKPS---VISQKDLGWPFL 174
>gi|86135157|ref|ZP_01053739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaribacter sp. MED152]
gi|85822020|gb|EAQ43167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Polaribacter sp. MED152]
Length = 176
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/171 (38%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ +++ ++D RG F ++++ + ++ G FVQDN S S G IR LH Q+
Sbjct: 8 LKGCFVIEPTVYKDERGTFVESFNQQEFEKAIGTTVNFVQDNESVS-KKGVIRALHMQKE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY+QAKLVR + GR+ D+AVD R++SPT+G S+E+S NG Q++IP F HGF TLE
Sbjct: 67 PYSQAKLVRVVKGRVLDVAVDCRKDSPTFGQHFSIELSRENGKQLFIPRNFLHGFSTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+T YK ++Y + G+ + D ++ I W + + +SEKD L
Sbjct: 127 DTIFNYKCDNYYQRGSELGIIYNDATLGIDWKI-GSEEIILSEKDAILGAF 176
>gi|219670180|ref|YP_002460615.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfitobacterium hafniense
DCB-2]
gi|219540440|gb|ACL22179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfitobacterium hafniense
DCB-2]
Length = 178
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/168 (38%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++K F D RG FS+ + + L+ GL Q N S + + GT+RGLH Q
Sbjct: 7 KIAGAYLVKREPFADERGTFSRLFCRRELEAAGLCGEISQMNLSTNRNKGTLRGLHSQSG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
A+ KLV C+ G +FD+ VD+R +SPTY WV +SA NG+ +Y+P G AHG++T+
Sbjct: 67 NAAEDKLVTCVQGEVFDVCVDVREDSPTYLQWVGETLSAENGMGLYVPKGCAHGYLTMTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
N +V+Y VT++Y+ + + G + D + +I WP++ +SEKD+N
Sbjct: 127 NAQVLYLVTEYYTPDTEVGYRFDDSAFEIAWPIMPPY--IMSEKDKNW 172
>gi|148824675|ref|YP_001289429.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis F11]
gi|148723202|gb|ABR07827.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis F11]
Length = 202
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 6 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 65 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ VIY + Y+ + + + D ++ + WPL+D PS+S++D P +
Sbjct: 125 QDNSTVIYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV 180
>gi|260206836|ref|ZP_05774327.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis K85]
gi|289576201|ref|ZP_06456428.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis K85]
gi|289540632|gb|EFD45210.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium
tuberculosis K85]
Length = 202
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 6 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 65 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ + WPL+D PS+S++D P +
Sbjct: 125 QDNSTVMYLCSAEYNPQREHTICAADPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV 180
>gi|315039055|ref|YP_004032623.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus amylovorus GRL
1112]
gi|312277188|gb|ADQ59828.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus amylovorus GRL
1112]
Length = 202
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + E G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMEAGFSINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R NS TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQVKLVRAVRGSVFDVAVDLRSNSKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D +++E+D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPHLKGDYPGSADASGYTLDDGTKLNMAERD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|327184175|gb|AEA32622.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus amylovorus GRL
1118]
Length = 202
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + E G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMEAGFSINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQVKLVRAVRGSVFDVAVDLRSESKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D +++E+D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPHLKGDYPGSADASGYTLDDGTKLNMAERD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|23500186|ref|NP_699626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella suis 1330]
gi|161620506|ref|YP_001594392.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella canis ATCC 23365]
gi|163844603|ref|YP_001622258.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella suis ATCC 23445]
gi|254699693|ref|ZP_05161521.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella suis bv. 5 str. 513]
gi|254702829|ref|ZP_05164657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella suis bv. 3 str. 686]
gi|254706050|ref|ZP_05167878.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella pinnipedialis
M163/99/10]
gi|254712263|ref|ZP_05174074.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella ceti M644/93/1]
gi|254715334|ref|ZP_05177145.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella ceti M13/05/1]
gi|256015220|ref|YP_003105229.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella microti CCM 4915]
gi|256059351|ref|ZP_05449553.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella neotomae 5K33]
gi|256157869|ref|ZP_05455787.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella ceti M490/95/1]
gi|256253170|ref|ZP_05458706.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella ceti B1/94]
gi|260167195|ref|ZP_05754006.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. F5/99]
gi|260568258|ref|ZP_05838727.1| dTDP-4-dehydrorhamnose reductase [Brucella suis bv. 4 str. 40]
gi|261217064|ref|ZP_05931345.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti M13/05/1]
gi|261220277|ref|ZP_05934558.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti B1/94]
gi|261313487|ref|ZP_05952684.1| dTDP-4-dehydrorhamnose reductase [Brucella pinnipedialis
M163/99/10]
gi|261319934|ref|ZP_05959131.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti M644/93/1]
gi|261323310|ref|ZP_05962507.1| dTDP-4-dehydrorhamnose reductase [Brucella neotomae 5K33]
gi|261750158|ref|ZP_05993867.1| dTDP-4-dehydrorhamnose reductase [Brucella suis bv. 5 str. 513]
gi|261753431|ref|ZP_05997140.1| dTDP-4-dehydrorhamnose reductase [Brucella suis bv. 3 str. 686]
gi|261756599|ref|ZP_06000308.1| dTDP-4-dehydrorhamnose reductase [Brucella sp. F5/99]
gi|265996377|ref|ZP_06108934.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti M490/95/1]
gi|23463787|gb|AAN33631.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella suis 1330]
gi|161337317|gb|ABX63621.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella canis ATCC 23365]
gi|163675326|gb|ABY39436.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella suis ATCC 23445]
gi|255997880|gb|ACU49567.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella microti CCM 4915]
gi|260154923|gb|EEW90004.1| dTDP-4-dehydrorhamnose reductase [Brucella suis bv. 4 str. 40]
gi|260918861|gb|EEX85514.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti B1/94]
gi|260922153|gb|EEX88721.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti M13/05/1]
gi|261292624|gb|EEX96120.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti M644/93/1]
gi|261299290|gb|EEY02787.1| dTDP-4-dehydrorhamnose reductase [Brucella neotomae 5K33]
gi|261302513|gb|EEY06010.1| dTDP-4-dehydrorhamnose reductase [Brucella pinnipedialis
M163/99/10]
gi|261736583|gb|EEY24579.1| dTDP-4-dehydrorhamnose reductase [Brucella sp. F5/99]
gi|261739911|gb|EEY27837.1| dTDP-4-dehydrorhamnose reductase [Brucella suis bv. 5 str. 513]
gi|261743184|gb|EEY31110.1| dTDP-4-dehydrorhamnose reductase [Brucella suis bv. 3 str. 686]
gi|262550674|gb|EEZ06835.1| dTDP-4-dehydrorhamnose reductase [Brucella ceti M490/95/1]
Length = 174
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NIN ++ + +D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q
Sbjct: 6 LNINGAWSIEPERLKDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQN 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+++ KLV C+ G ++D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL
Sbjct: 66 EPHSETKLVTCLQGIVWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + Y ++ Y+ +H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 126 DDVLIRYMISKPYAPDHAAGIRYDDPALDIPWPEKPS---VISQKDLGWPFL 174
>gi|330816479|ref|YP_004360184.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia gladioli BSR3]
gi|327368872|gb|AEA60228.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia gladioli BSR3]
Length = 183
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ F D+RG+F ++++++ +E + FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPAVFGDTRGFFYESFNAREFEESVAQGFEFVQDNHSRSMR-GVLRGLHYQIV 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR +AG +FD+AVD+R +SP +G W + +SA N Q++IP GFAHGF+ L +
Sbjct: 69 R-PQGKLVRVVAGEVFDVAVDLRLSSPHFGKWAGVRLSAKNYRQLWIPPGFAHGFVVLSV 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ E +YK TD++ E++ + W D I I WP+ P ++ KD L + +
Sbjct: 128 SAEFVYKATDYWFPEYERSLLWSDPMIKIDWPI--EQAPLLAAKDAEGKPLFEAECY 182
>gi|225010349|ref|ZP_03700821.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteria bacterium
MS024-3C]
gi|225005828|gb|EEG43778.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Flavobacteria bacterium
MS024-3C]
Length = 180
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + F+D+RG F + ++ GL Q+N S S GTIR LH+Q+
Sbjct: 8 LKGCFEITPNLFKDARGSFFEAFNKAHFYAATGLSFEVAQENQSTS-VKGTIRALHYQKG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
YAQAKLVR +AG I D+ VD+R SPTYG ++SA N Q+YIP GFAHGF L
Sbjct: 67 AYAQAKLVRVLAGEIIDVVVDLRPGSPTYGIHHRTKLSALNLKQLYIPKGFAHGFSVLTN 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V+Y Y + + G+ + D S++I W L P +SEKDQ LP L +
Sbjct: 127 TATVVYACDAPYQKDQEGGIYFADPSLNIDWGL-GERRPLLSEKDQALPLLKDV 179
>gi|169836770|ref|ZP_02869958.1| dTDP-4-dehydrorhamnose 3,5-epimerase [candidate division TM7
single-cell isolate TM7a]
Length = 168
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/154 (48%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + F D RG+F +TY+ K +ELGL FVQDNHS S G +RGLHFQ
Sbjct: 11 IKDLVIIEPKVFGDERGFFMETYNQKSFEELGLTMNFVQDNHSKS-KKGVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLV I G ++D+AVD+R+ S T+G W ++++S+ N L YIP GFAHGF+TLE
Sbjct: 69 HTQGKLVCVIKGSVYDVAVDLRKGSKTFGKWYAVKLSSENKLMFYIPEGFAHGFLTLEDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD 156
TE YK TD Y+ E+DSG+ W D++I+I W +
Sbjct: 129 TEFTYKCTDLYAPEYDSGILWNDETINIDWKFEE 162
>gi|313886441|ref|ZP_07820160.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924122|gb|EFR34912.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 188
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +++ + D+RG+F++TY + +VQ+N S S G +RGLH QR
Sbjct: 9 DLAGVYLIEPDCYGDARGYFAETYRTADFAATVSPRPWVQENES-SSVRGVLRGLHLQRG 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+QAKLVRC+ G I D+ VD+RR+S TYG W S +S N Q+YIP FAHGF+ L
Sbjct: 68 EASQAKLVRCVVGEIMDLIVDLRRDSDTYGQWRSYHLSETNHRQLYIPREFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFLNQ 174
+ +YKV + Y+ E + + + D + I W +S+KD L
Sbjct: 128 QAKFLYKVDNGYAPESELCIRYDDPQLAIPWESWGIAPEELILSDKDLRGISLAD 182
>gi|239833694|ref|ZP_04682022.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum intermedium LMG
3301]
gi|239821757|gb|EEQ93326.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum intermedium LMG
3301]
Length = 181
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI+ ++ + +D RGWF++ + E ++ F Q + SFS + GT+RGLH+Q
Sbjct: 13 LNIDGAWSIEPERLKDERGWFARVFCEGAFAERQMETHFPQHSLSFSREKGTLRGLHYQS 72
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+++ KLV C+ G I+D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL
Sbjct: 73 EPHSETKLVTCLQGVIWDVLVDLRPHSPTYRRWTGVELSAENGVQLYIPEGCAHGFQTLT 132
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ V Y ++ Y+ ++ +G+ + D ++ I WP +S+KD P L
Sbjct: 133 PDVLVRYMISKPYAPDYATGLRYDDPALGIPWP---NRPSVISDKDLAWPLL 181
>gi|153010710|ref|YP_001371924.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum anthropi ATCC
49188]
gi|151562598|gb|ABS16095.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum anthropi ATCC
49188]
Length = 174
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI+ ++ + ED RGWF++ Y E ++ F Q + SFS + GT+RGLH+Q
Sbjct: 6 LNIDGAWSIEPERLEDERGWFARVYCEAAFAERQMETHFPQHSLSFSREEGTLRGLHYQN 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+++ KLV C+ G I+D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL
Sbjct: 66 EPHSETKLVTCLQGVIWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ V Y ++ Y+ ++ +G+ + D S+ I WP +S+KD P L
Sbjct: 126 SDVLVRYMISKPYAPDYATGLRYDDPSLGIPWP---NRPSVISDKDLAWPLL 174
>gi|306845701|ref|ZP_07478270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. BO1]
gi|306274022|gb|EFM55849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. BO1]
Length = 174
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI+ ++ + +D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q
Sbjct: 6 LNIDGAWSIEPERLKDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQN 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ + KLV C+ G ++D+ VDIR +SPTY W +E+SA NG Q+YIP G AHGF TL
Sbjct: 66 EPHCETKLVTCLQGIVWDVLVDIRPHSPTYRRWAGVELSAENGAQLYIPEGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + Y ++ Y+ +H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 126 DDVLIRYMISKPYAPDHAAGIRYDDPALDIPWPDKPS---VISQKDLGWPFL 174
>gi|294853750|ref|ZP_06794422.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. NVSL 07-0026]
gi|294819405|gb|EFG36405.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella sp. NVSL 07-0026]
Length = 174
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NIN ++ + +D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q
Sbjct: 6 LNINGAWSIEPERLKDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQN 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+++ KLV C+ G ++D+ D+R +SPTY W +E+SA NG+Q+YIP G AHGF TL
Sbjct: 66 EPHSETKLVTCLQGIVWDVLADLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + Y ++ Y+ +H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 126 DDVLIRYMISKPYAPDHAAGIRYDDPALDIPWPEKPS---VISQKDLGWPFL 174
>gi|117925732|ref|YP_866349.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Magnetococcus sp. MC-1]
gi|117609488|gb|ABK44943.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Magnetococcus sp. MC-1]
Length = 182
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ +L++ +F D RG+F+++Y+ K +L GL+ FVQDNHS S +RG+H+Q
Sbjct: 8 LHGALVLQSTRFTDDRGFFTESYNHKKFSQLTGLKTHFVQDNHSRSKRH-VLRGMHYQ-L 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
QAKLV+ G ++D+ VD+R++SPT+ L +SA+NGL +++P GFAHGF+ L
Sbjct: 66 RQPQAKLVQVCQGEVYDVIVDMRQSSPTFKQHFGLRLSADNGLALWVPEGFAHGFLVLSE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
++ YKV + Y + + W D I I WPL D P +S KD +Q++
Sbjct: 126 QADLHYKVNNDYDPTSERCLHWADAEIGIAWPLSD-QPPLLSPKDAQGLPFDQLE 179
>gi|16611773|gb|AAL27354.1|AF402315_9 dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella boydii]
Length = 177
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+N I++ + D RG+F + Y + K + G FVQDN+S S +RGLHFQ
Sbjct: 8 LNDAFIIEPDVYGDERGFFQEVYHHEKYKNIIGENLTFVQDNYSRSQK-NVLRGLHFQ-T 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G +FD+AVD+R+NS TYG W +E++ N Q +IP G AHGF+ L
Sbjct: 66 SNPQGKLVRVVRGSVFDVAVDLRKNSSTYGHWYGIELNEWNKKQFWIPPGMAHGFLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ YK TDFY E + + W D I++ WP+ + P +S KD+ +
Sbjct: 126 IADFEYKCTDFYHPEFEKCLIWNDPIINVKWPINEE--PILSPKDRKGIRFEDL 177
>gi|213023410|ref|ZP_03337857.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 165
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 73/151 (48%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V IL+ + F D RG+F ++Y+ + +E +G + FVQDNHS S +RGLHFQR
Sbjct: 9 IPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKS-KKNVLRGLHFQRG 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
AQ KLVRC G +FD+AVDIR+ SPT+G WV + +SA N Q++IP GFAHGF+TL
Sbjct: 68 ENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITW 152
E +YK T++YS + + W D++I I W
Sbjct: 128 YAEFLYKATNYYSPSSEGSILWNDETIGIEW 158
>gi|221639431|ref|YP_002525693.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides
KD131]
gi|221160212|gb|ACM01192.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides
KD131]
Length = 177
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ ED RGWF +T+ + + GL+ FVQ N S++ GT+RG+H+QR P
Sbjct: 8 LKDAVLIEAEPREDHRGWFERTFCMEEMAGAGLKTGFVQHNSSYNHAAGTLRGMHYQRAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+++ K++ C GRI D+ +D+R +SPTY W ++ A + Q+Y+P GFAHG++TLE
Sbjct: 68 HSEVKVITCTRGRIQDVIIDLRPDSPTYLKWEGFDLKAGDHRQLYVPKGFAHGYLTLEDA 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
T V Y V+ Y+ + GV W D + I W + +SEKD P
Sbjct: 128 TAVSYLVSTAYTPGAEGGVRWDDPAFGIDW---AAEVSVISEKDAAWPDFE 175
>gi|78213549|ref|YP_382328.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. CC9605]
gi|78198008|gb|ABB35773.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. CC9605]
Length = 193
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 100/178 (56%), Gaps = 4/178 (2%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
++ + F D RGWF ++++ + + G +F QDNHS S G +RGLH+Q P
Sbjct: 16 GPLLITPQAFGDDRGWFYESWNQRKFDDAVGESVLFSQDNHSRS-IQGVLRGLHYQLAPE 74
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
QAKLVR G I+D+AVDIRRNSPT+G WV E+SA N Q++IP GFAHGF+TL
Sbjct: 75 PQAKLVRATVGAIYDVAVDIRRNSPTFGAWVGAELSAENKCQLWIPEGFAHGFLTLSDVA 134
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQIDSPF 179
EV YK F++ + G+ W D + I WP+ S+S KD F
Sbjct: 135 EVQYKARGFWNKSCERGIIWNDSDLAIAWPIDRLQGAEVSLSGKDAEAASFKAAGDVF 192
>gi|19550671|gb|AAL91483.1|AF479753_4 putative dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC
[Lactobacillus gasseri]
Length = 202
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + E G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMEAGFSINFVQDNQS-SSTKGVLRGLHFQ-KK 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQIKLVRAVRGSVFDVAVDLRSESKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D +++E+D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPHLKGDYPGSPDASGYTLDDGTKLNMAERD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|227822978|ref|YP_002826950.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium fredii NGR234]
gi|227341979|gb|ACP26197.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium fredii NGR234]
Length = 177
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + +++ ++ D RG+FS+ + L++ G Q NH+ + G IRG+HFQRPP
Sbjct: 11 LAGLVVIERKRAGDERGFFSRFFCRDELRDFGGDGSIAQINHTLTRIKGAIRGMHFQRPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + K V C++G +FD+AVDIR +SPTY W +SA N + IP GFAHGF TL
Sbjct: 71 HDETKFVSCLSGAVFDVAVDIRPDSPTYLQWHGEILSAENARSMMIPGGFAHGFQTLAEE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E+IY Y+ + G+ D + I WPL T +SE+D+ L
Sbjct: 131 CELIYLHDKPYAPGAEGGLNPLDPRLGIKWPLEVT---QMSERDRAFGLL 177
>gi|168702105|ref|ZP_02734382.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gemmata obscuriglobus UQM
2246]
Length = 177
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V +++ D RG F++TY ++ GL + Q N SF+ GT+RG+H+Q
Sbjct: 7 ELPGVFVIEPEPTGDDRGLFARTYCAEEFARRGLCTQWAQCNVSFNTRAGTLRGMHWQAA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ + KLVRC AG D+ D R +SPTY WV++E++A N +YIP G+AHGF T
Sbjct: 67 PHEEVKLVRCTAGAALDVVADARPDSPTYRKWVAVELTAANRRAVYIPGGYAHGFQTFAD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
TE+ Y+++ FY G W D ++ I WP D ++ +D + P L
Sbjct: 127 GTELFYQMSAFYVPGAARGARWDDPALGIAWPPCDRR--VIAPRDLSFPDL 175
>gi|212691379|ref|ZP_03299507.1| hypothetical protein BACDOR_00871 [Bacteroides dorei DSM 17855]
gi|212665989|gb|EEB26561.1| hypothetical protein BACDOR_00871 [Bacteroides dorei DSM 17855]
Length = 189
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 2/180 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V IL+ R F D+RG+F +++S + +E + FVQDN SFS G +RGLHFQ+PP
Sbjct: 8 IDGVFILEPRIFNDARGYFFESFSEREFEEKVCRTTFVQDNESFSTY-GVLRGLHFQKPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q+KLVR I G + D+AVDIR+ SPT+G V++E++ N Q +IP GFAHGF L
Sbjct: 67 FTQSKLVRVIKGAVLDVAVDIRKGSPTFGKHVAVELTGENHRQFFIPRGFAHGFAVLSDE 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
YK +Y+ + + G+AW D + I W L + +S+KD+ P L + F+++
Sbjct: 127 VLFQYKCDHYYAPQSEGGIAWDDPDLGIDWRLPADKV-ILSDKDKKHPRLKDYQTDFDFN 185
>gi|77463589|ref|YP_353093.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides
2.4.1]
gi|126462421|ref|YP_001043535.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides ATCC
17029]
gi|332558445|ref|ZP_08412767.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides WS8N]
gi|77388007|gb|ABA79192.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides
2.4.1]
gi|126104085|gb|ABN76763.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides ATCC
17029]
gi|332276157|gb|EGJ21472.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacter sphaeroides WS8N]
Length = 177
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ ED RGWF +T+ + + GL+ FVQ N S++ GT+RG+H+QR P
Sbjct: 8 LKDAVLIEAEPREDHRGWFERTFCMEEMAGAGLKTGFVQHNSSYNHAAGTLRGMHYQRAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+++ K++ C GRI D+ +D+R +SPTY W ++ A + Q+YIP GFAHG++TLE
Sbjct: 68 HSEVKVITCTRGRIQDVIIDLRPDSPTYLKWEGFDLKAGDHRQLYIPEGFAHGYLTLEDA 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
T V Y V+ Y+ + GV W D + I W + +SEKD P
Sbjct: 128 TAVSYLVSAAYTPGAEGGVRWDDPAFGIDW---AAEVSVISEKDAAWPDF 174
>gi|312065238|ref|XP_003135693.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Loa loa]
gi|307769139|gb|EFO28373.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Loa loa]
Length = 194
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 5/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ +++++ + F D+RG+F ++Y+ L LG + F QDNHS+S G +RGLH Q
Sbjct: 20 IDGLKLIRPKLFPDARGYFVESYNEYELGALGFFEKFKQDNHSYSKS-GVLRGLHAQP-- 76
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV I+G+I+D+AVDIR S T+G W + + +IP GF HGF L
Sbjct: 77 -GMGKLVSVISGKIYDVAVDIRPTSETFGKWYGVVLDERARTGFWIPDGFLHGFYVLSEK 135
Query: 123 -TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
V YK T Y+ + + GV D + I W + D +S++D++ L
Sbjct: 136 GAHVTYKCTAIYNAQAEFGVNPFDPELAIDWRINDPSKLIISDRDRSHQNLK 187
>gi|153868867|ref|ZP_01998601.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Beggiatoa sp. PS]
gi|152074563|gb|EDN71405.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Beggiatoa sp. PS]
Length = 176
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 63/170 (37%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ D RG+F++T+ + + GL VQ N SF+ + GT+RG+H+Q P
Sbjct: 8 LPGAYLIEFEPITDERGFFARTWCQQEFEAHGLNPNLVQCNISFNKNKGTLRGMHYQVAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y +AKLVRC G I+D+ +D+ S T+ W+++E++ANN +YIP FAHGF TL N
Sbjct: 68 YEEAKLVRCTKGAIYDVIIDLHPESSTFKQWLAVELTANNQKMLYIPERFAHGFQTLADN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
TEV Y+++ FY E G+ W D + I W +S KD
Sbjct: 128 TEVFYQMSTFYHPECARGLRWNDPAFKIKWATDKQ---IISAKDSQYSDF 174
>gi|91793899|ref|YP_563550.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella denitrificans
OS217]
gi|91715901|gb|ABE55827.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella denitrificans
OS217]
Length = 191
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-----DVFVQDNHSFSFDCGTIRGLH 57
I V + K D RG+F +T+ K + VQDN S S +RGLH
Sbjct: 8 IPEVLLFKPTLHGDERGFFMETFRQKEFDACLMANGMAATPLVQDNVSRSHRH-VLRGLH 66
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
FQ + Q KLVR G IFD+AVDIR S T+G WV +SA N LQ++IPTGFAHGF
Sbjct: 67 FQ-EHHPQGKLVRVSQGEIFDVAVDIRPQSATFGHWVGHILSAENRLQMWIPTGFAHGFY 125
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
L +++YK +D+Y + + W D + I WPL P +S KD N F Q +
Sbjct: 126 VLSDIADIVYKCSDYYQSHDERVIPWNDPQLAIDWPL--EAEPILSIKD-NPQFFCQASN 182
Query: 178 P 178
P
Sbjct: 183 P 183
>gi|254458121|ref|ZP_05071547.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacterales bacterium
GD 1]
gi|207084957|gb|EDZ62243.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacterales bacterium
GD 1]
Length = 187
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 113/180 (62%), Gaps = 1/180 (0%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +L + F D RG+F ++YS E G+ F+QDNHS+S D T RGLH+Q
Sbjct: 7 KLSGVLVLTPKIFNDERGFFYESYSKNSFLEHGVNHDFIQDNHSYSRDKYTFRGLHYQMN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ L+R ++G I D AVD+R+NSPTYG + S+ +SA N Q+ IP GFAHGF+TL
Sbjct: 67 PKAQTTLIRVVSGEIMDFAVDLRKNSPTYGQYTSVLLSAENHKQLLIPKGFAHGFLTLTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
N ++YK+ D Y+ E+D + +D +DI + D ++++KD+ P L I++ F Y
Sbjct: 127 NVNILYKMDDIYAPEYDRILNVRDHQVDIKLGV-DFDKITIAKKDEKAPMLENIENNFIY 185
>gi|256843714|ref|ZP_05549202.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus crispatus
125-2-CHN]
gi|256615134|gb|EEU20335.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus crispatus
125-2-CHN]
Length = 202
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + E G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMEAGFSINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R NS TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQIKLVRAVRGSVFDVAVDLRSNSKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP----------------SVSEKD 166
E YKV DF+ + G+AW D I I WP + P ++ E+D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIKWPHVKGDYPGSADASGYTMDDGTKLNLVERD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|256856006|emb|CBB12351.1| RmlC protein [Rhodococcus aetherivorans]
Length = 195
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + R+F D RG F + + G Q N S S G +RG+H+
Sbjct: 6 LKIPGAYEITPRQFGDDRGVFYEWFKQPTFTDAAGRALDLAQANCSVS-AAGVLRGIHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C AG + D+ VD+R SPT+G W ++ + + I++P G H F +L
Sbjct: 65 DVPPGQAKYVTCPAGAVLDVVVDLRVGSPTFGQWDAVLLDDVDRRAIFLPEGLGHAFCSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
+ V+Y + Y+ + + + D I I WP + +S+KD+ P L
Sbjct: 125 ADGSTVVYLCSTGYNPDREHEIDPLDPQIGIDWPTTGRDGAPLHHQLSDKDRAAPSLADA 184
>gi|18309599|ref|NP_561533.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens str.
13]
gi|18144276|dbj|BAB80323.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium perfringens str.
13]
Length = 160
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 76/162 (46%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 22 SQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAV 81
+TYS K +E GL FVQDN S S G +RGLHFQ + Q KLVR G ++D+AV
Sbjct: 1 METYSQKAFEEAGLTMKFVQDNESKSKK-GVLRGLHFQ-TKHTQGKLVRVTQGEVWDVAV 58
Query: 82 DIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGV 141
D+R+ SPT+G W + +SA N Q Y+P GFAHGF+ L YK TDFY+ E+DSG+
Sbjct: 59 DLRKGSPTFGQWEGVHLSAENKRQFYVPEGFAHGFVVLSDEAVFNYKCTDFYAPEYDSGL 118
Query: 142 AWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDG 183
W DK +++ WPL +SEKD+ L ++D PF Y+G
Sbjct: 119 LWNDKYVNVEWPLEGIEEIILSEKDKKQKTLKELDIPFIYEG 160
>gi|332293421|ref|YP_004432030.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Krokinobacter diaphorus
4H-3-7-5]
gi|332171507|gb|AEE20762.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Krokinobacter diaphorus
4H-3-7-5]
Length = 184
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I + FED RG+F ++Y+S+ + G +FVQDN S S G +RGLHFQ
Sbjct: 8 FKDLIICTPKVFEDDRGYFYESYNSEAFERFAGFSPLFVQDNQSKS-SFGVLRGLHFQIG 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ+KLVR I G++ D+ VD+R+ PTYG ++E+S N Q+++P G AHGF+TL
Sbjct: 67 KHAQSKLVRVIEGKVLDVVVDLRKEEPTYGKSFAIELSGANKKQLFVPKGMAHGFITLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
YK FY + + G+A+ D S+ I W LL+ +S KD P L+++ +
Sbjct: 127 TAIFAYKCDAFYDQKSERGLAYNDVSLKIDW-LLNEHEFLLSPKDLENPMLSELKN 181
>gi|194292861|ref|YP_002008768.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Cupriavidus taiwanensis LMG
19424]
gi|193226765|emb|CAQ72716.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Cupriavidus taiwanensis LMG
19424]
Length = 184
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ++ D RG F++ + GL FVQ + S + G +RG+HFQ
Sbjct: 8 IAGAWLIDPEPLHDERGHFARIVCQATFERHGLNARFVQQSVSRNTRAGILRGMHFQAGA 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+ KLVR AG + D+ +D+RR+S TY W + E+SA + +YIP G AHGF TL
Sbjct: 68 AAEEKLVRATAGVVHDVILDLRRDSATYLQWQAFELSAQSQRAVYIPKGVAHGFQTLTAL 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+EV Y++T YS +H G+ W D I I WP D +S +D LP L +
Sbjct: 128 SEVFYQMTVPYSPQHSQGLRWDDPDIGIAWP--DCEDRLISARDLALPTLAE 177
>gi|228994849|ref|ZP_04154646.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus pseudomycoides DSM
12442]
gi|228764896|gb|EEM13653.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus pseudomycoides DSM
12442]
Length = 171
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 3/172 (1%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F D+RG+F ++Y+ K+L+ LG+ FVQDN S+S + G IRGLHFQ P AQ KLV+ I
Sbjct: 2 FHDARGYFKESYNEKVLRHLGIHHKFVQDNTSYSKEAGVIRGLHFQLEPRAQTKLVQVIQ 61
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
G IFD+ VD+R+ SPTY W S ++ +N + +P GFAHGF TL +T V YKV +FY
Sbjct: 62 GAIFDVIVDLRKGSPTYKKWQSFLLTGDNHRLLLVPKGFAHGFCTLVPHTIVHYKVDEFY 121
Query: 134 SVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLP 185
DSG+AW D+ I+WP+ + P +SEKD LP N+ F++ +
Sbjct: 122 DASCDSGIAWNDEEFAISWPVSN---PVLSEKDGMLPKFNETTHYFQFKEIS 170
>gi|118616616|ref|YP_904948.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium ulcerans
Agy99]
gi|118568726|gb|ABL03477.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium ulcerans
Agy99]
Length = 201
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + DSRG F + + G + Q N S S G +RGLHF
Sbjct: 6 LKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAFCGHRFDVRQANCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +Q+K V C++G +FD+ VDIR SPT+G W S+ + IYI G AHGF+ L
Sbjct: 65 ELPPSQSKYVTCVSGAVFDVVVDIRLGSPTFGQWDSVLLDD-RHRSIYISEGLAHGFLAL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + V+Y + Y+ + + + D + I WPL+D PS+SE+D L+++
Sbjct: 124 QDKSTVMYMCSAEYNPQREHTICATDPELAIDWPLVDGAPPSLSERDAAAGSLDEV 179
>gi|332286406|ref|YP_004418317.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Pusillimonas sp. T7-7]
gi|330430359|gb|AEC21693.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Pusillimonas sp. T7-7]
Length = 193
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+ ++ F D RG F ++Y + LG FVQDN S S G +RGLH+Q
Sbjct: 8 LAGVKRIELAVFRDDRGCFLESYQQERYAQALGDAVRFVQDNCSHSHR-GVLRGLHYQ-V 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANN----------GLQIYIPTG 111
+ Q KLVR G IFD+AVD+R SPT+G W +S+ +Q++IP G
Sbjct: 66 EHPQGKLVRVAQGEIFDVAVDLRPGSPTFGQWEGHTLSSAQLALPAAGTVSHIQLWIPPG 125
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
FAHGF TL V YK TD+Y ++ + W D + I WP + P +S+KD+
Sbjct: 126 FAHGFFTLSETAMVEYKCTDYYHPGDEACLLWNDPELAIAWP---DVQPRLSDKDRAGLS 182
Query: 172 LN 173
L
Sbjct: 183 LR 184
>gi|254711650|ref|ZP_05173461.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella pinnipedialis B2/94]
gi|256029716|ref|ZP_05443330.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella pinnipedialis
M292/94/1]
gi|261319274|ref|ZP_05958471.1| dTDP-4-dehydrorhamnose reductase [Brucella pinnipedialis B2/94]
gi|265986727|ref|ZP_06099284.1| dTDP-4-dehydrorhamnose reductase [Brucella pinnipedialis M292/94/1]
gi|261298497|gb|EEY01994.1| dTDP-4-dehydrorhamnose reductase [Brucella pinnipedialis B2/94]
gi|264658924|gb|EEZ29185.1| dTDP-4-dehydrorhamnose reductase [Brucella pinnipedialis M292/94/1]
Length = 174
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NIN L+ + +D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q
Sbjct: 6 LNINGAWSLEPERLKDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQN 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+++ KLV C+ G ++D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL
Sbjct: 66 EPHSETKLVTCLQGIVWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + Y ++ Y+ +H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 126 DDVLIRYMISKPYAPDHAAGIRYDDPALDIPWPEKPS---VISQKDLGWPFL 174
>gi|183981101|ref|YP_001849392.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium marinum
M]
gi|183174427|gb|ACC39537.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium marinum
M]
Length = 201
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + DSRG F + + G + Q N S S G +RGLHF
Sbjct: 6 LKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAFCGHRFDVRQANCSVSSA-GVLRGLHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C++G +FD+ VDIR SPT+G W S+ + IYI G AHGF+ L
Sbjct: 65 ELPPSQAKYVTCVSGAVFDVVVDIRLGSPTFGQWDSVLLDD-RHRSIYISEGLAHGFLAL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + V+Y + Y+ + + + D + I WPL+D PS+SE+D L+++
Sbjct: 124 QDKSTVMYMCSAEYNPQREHTICATDPELAIDWPLVDGAPPSLSERDAAAGSLDEV 179
>gi|332671010|ref|YP_004454018.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas fimi ATCC 484]
gi|332340048|gb|AEE46631.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas fimi ATCC 484]
Length = 206
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + R+F D RG F + ++ + +G Q N S S G +RG+HF
Sbjct: 6 LSVPGALEITPRQFADDRGVFLEWFAGAAFGEAVGHDLTLAQANCSVS-AAGVLRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G + D+ VDIR SPT+G W S+ + + IY+P G H FM+L
Sbjct: 65 DVPPGQAKYVTCARGAVLDVVVDIRVGSPTFGQWDSVLLDDVDRRAIYVPEGLGHAFMSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y + Y+ + GV D + I WP + P +S KD P L
Sbjct: 125 EDDSTVLYLCSAPYAPGREHGVHPLDADLAIAWPTQGRDGRPLTPLLSPKDAEAPSLADA 184
Query: 176 DSPFEYDGLPLLSLNME 192
+ GL ++ ++E
Sbjct: 185 QA----QGLLPVAADVE 197
>gi|111021079|ref|YP_704051.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus jostii RHA1]
gi|110820609|gb|ABG95893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus jostii RHA1]
Length = 195
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + R+F D RG F + + + G Q N S S G +RG+HF
Sbjct: 6 LKVPGAWEITPRQFGDDRGVFLEWFKGSEFEAAVGHSLELAQANCSVSAA-GVLRGIHFT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G D+ VD+R SP +G W S+ I + +Y+P G H ++L
Sbjct: 65 DNPPGQAKYVTCVKGAFLDVIVDLRVGSPMFGQWDSVLIDDADRRAVYLPAGVGHAILSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E + V+Y + Y+ D + D + I WP + + +SEKD P L Q
Sbjct: 125 EDASTVMYLCSIEYTPALDHDLHPLDPELGIDWPTVGRDGSPLTFQLSEKDSAAPSLQQA 184
>gi|227541663|ref|ZP_03971712.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182631|gb|EEI63603.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 197
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
N+ V + D RG F + + + +E G Q N S S G +RGLH+
Sbjct: 6 NLPGVLLSVPEIHPDDRGTFHEWFKATDFEEAVGFPFDLQQANVSTS-KSGVLRGLHYAD 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V CI+GRI+D+AVDIR+ S ++G ++ +E+SA N +Y+P GFAHGF+ LE
Sbjct: 65 VPPGQAKFVSCISGRIWDVAVDIRKGSASFGRYIGVELSAENRHSLYLPVGFAHGFVALE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+T V Y ++ Y+ H+ G+ D+ + I WP + +S+KDQN P L ++ P
Sbjct: 125 DST-VAYLCSEGYNPSHEHGINAFDEELGIDWP---SRDVILSDKDQNAPGLREVKLP 178
>gi|302529983|ref|ZP_07282325.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. AA4]
gi|302438878|gb|EFL10694.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. AA4]
Length = 205
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ ++ R F D+RG F + + + + G Q NHS S GTIRG+HF
Sbjct: 9 LKVSGAFEFVPRVFPDARGLFVAPFQEEAIVRAAGHPLRVAQTNHSVS-RAGTIRGVHFA 67
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C +G + D+ VD+R SPT+G W ++ + + +Y+ G H F+ L
Sbjct: 68 DTPPGQAKYVYCPSGALLDVVVDLRAGSPTFGEWDAVRLDSAEFRAVYVAEGLGHAFVAL 127
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T + Y ++ Y+ + G+ D ++D+ WP + P VSEKD+ P L +
Sbjct: 128 EDDTVMAYLCSEPYNPAGEHGINPLDPALDLPWP--ADLAPIVSEKDKAAPTLAEA 181
>gi|227487169|ref|ZP_03917485.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227092827|gb|EEI28139.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 197
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
N+ V + D RG F + + + +E G Q N S S G +RGLH+
Sbjct: 6 NLPGVLLSVPEIHPDDRGTFHEWFKATDFEEAVGFPFDLQQANVSTS-KSGVLRGLHYAD 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V CI+GRI+D+AVDIR+ S ++G ++ +E+SA N +Y+P GFAHGF+ LE
Sbjct: 65 VPPGQAKFVSCISGRIWDVAVDIRKGSASFGRYIGVELSAENRHSLYLPVGFAHGFVALE 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+T V Y ++ Y+ H+ G+ D+ + I WP + +S+KDQN P L ++ P
Sbjct: 125 DST-VAYLCSEGYNPSHEHGINAFDEELGIDWP---SRDVILSDKDQNAPGLREVKLP 178
>gi|325143318|gb|EGC65653.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis
961-5945]
Length = 155
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH+Q
Sbjct: 8 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKSGK-GVLRGLHYQTEN 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 67 T-QGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVLSDE 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITW 152
E +YK TD+Y+ E + + W D ++ I W
Sbjct: 126 AEFVYKCTDYYNPEAEHSLIWNDPTVGIDW 155
>gi|24940618|gb|AAN65245.1|AF329398_35 dTDP-4-keto-6-deoxyglucose 3,5-epimerase [Streptomyces
roseochromogenes subsp. oscitans]
Length = 198
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + R+ D+RG F Y E+G Q N S S G +RG+HF
Sbjct: 6 LGIEGVWEITPRQHADARGVFLDWYCVDRFAAEVGRPLRLAQANLSVSAR-GVLRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G +FD+ VD+R S TYG W + + +Y+ G HGF +
Sbjct: 65 DVPPGQAKYVTCVRGAVFDVVVDLRVGSSTYGRWEGTRLDDVSRRAVYLSEGIGHGFCAI 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y + Y+ + GV D + I WP P +S +DQ+ L++
Sbjct: 125 SDEATLCYLCSQTYNPASEHGVHPLDPELAINWP---AGTPLLSARDQDALLLSEA 177
>gi|148558245|ref|YP_001257420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella ovis ATCC 25840]
gi|148369530|gb|ABQ62402.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella ovis ATCC 25840]
Length = 174
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NIN ++ + +D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q
Sbjct: 6 LNINGAWSIEPGRLKDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQN 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+++ KLV C+ G ++D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL
Sbjct: 66 EPHSETKLVTCLQGIVWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ + Y ++ Y+ +H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 126 DDVLIRYMISKPYAPDHAAGIRYDDPALDIPWPEKPS---VISQKDLGWPFL 174
>gi|124486242|ref|YP_001030858.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanocorpusculum labreanum
Z]
gi|124363783|gb|ABN07591.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanocorpusculum labreanum
Z]
Length = 193
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 6/187 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + I++T F D RG F++ + + L + + N S + G+IRG+HFQ+PP
Sbjct: 11 LKGLYIVETNAFIDHRGAFARWFCEEELAAVLGKRHIKNVNFSRTVKKGSIRGMHFQKPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLVRCI GRI D+ VDIR SPT+ S+E+SA N +P GFAHGF +LE +
Sbjct: 71 HAEMKLVRCIRGRILDVVVDIRAGSPTFLQHYSVELSAENMKMFAVPEGFAHGFQSLEDD 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+E++Y VT+FYS E ++G+ + D ++ I WPL +SEKD P +N F
Sbjct: 131 SEIMYLVTEFYSPESEAGLRFSDPALKIEWPLPVMD---ISEKDGKHPLVND---NFVGF 184
Query: 183 GLPLLSL 189
+ +
Sbjct: 185 DVSMYGE 191
>gi|295693596|ref|YP_003602206.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Lactobacillus crispatus ST1]
gi|295031702|emb|CBL51181.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus crispatus ST1]
Length = 202
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 100/195 (51%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + + G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQIKLVRAVRGSVFDVAVDLRSESKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++ E+D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIKWPHVKGDYPGSADASGYTLDDGTKLNLVERD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|288917896|ref|ZP_06412256.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
gi|288350685|gb|EFC84902.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
Length = 207
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + RK D RG F + + + L+ G + Q N S S GT+RG+H+
Sbjct: 6 LPIADTWLFTPRKHSDPRGTFLEWFRTDALESVAGHRLELAQANASVS-RAGTLRGVHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++GR+ D VDIR SPT+G ++ + + +YI G H FM L
Sbjct: 65 QVPPSQAKYVTCVSGRVLDCVVDIRLGSPTFGAHAAVILDDVDRRGLYIAEGLGHAFMAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
N + Y + Y+ + G+ D +D+ WP I P +SEKD P L+Q
Sbjct: 125 TDNAVITYLCSAPYTPAREYGINPLDPDLDLPWP--PDITPLLSEKDVAAPSLSQA 178
>gi|228469727|ref|ZP_04054695.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas uenonis 60-3]
gi|228308746|gb|EEK17472.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas uenonis 60-3]
Length = 188
Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +++ + D+RG+F++TY + +VQ+N S S G +RGLH QR
Sbjct: 9 DLAGVYLIEPDCYGDARGYFAETYRTADFAATVAPRPWVQENES-SSVRGVLRGLHLQRG 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+QAKLVRC+ G I D+ VD+RR+S TYG W S +S N Q+YIP FAHGF+ L
Sbjct: 68 EASQAKLVRCVVGEIIDLIVDLRRDSDTYGQWRSYHLSEQNHRQLYIPREFAHGFLVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFLNQ 174
+ +YKV + Y+ E + + + D + I W + +S+KD L
Sbjct: 128 QAKFLYKVDNGYAPESELCIRYDDPQLAIPWESWGISSEELILSDKDLRGISLAD 182
>gi|325002423|ref|ZP_08123535.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudonocardia sp. P1]
Length = 188
Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++ ++ ED RG+F++ + + + GL Q N S++ + GT+RG H+Q P
Sbjct: 8 LPGSALIDLKRLEDDRGFFARAFCEQEFLDAGLDPTITQCNLSYNHEAGTLRGFHYQLEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+ K++RC+ G IFD+ VD+R +S TY W E+S +N +Y+P FAH ++TL +
Sbjct: 68 NAEVKVIRCVRGAIFDVIVDLRPDSDTYLQWFGAELSQDNYKAMYVPRNFAHAYLTLTPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
IY+V+ Y+ + G+ W D +I + WP+ + +S+KD P +++
Sbjct: 128 ATTIYQVSTPYTPGAERGLRWSDPTIGVEWPVE---VAHISDKDAAWPLVSE 176
>gi|305665782|ref|YP_003862069.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Maribacter sp. HTCC2170]
gi|88710546|gb|EAR02778.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Maribacter sp. HTCC2170]
Length = 179
Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 3/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I +L+ FED RG F +++ + L+ LG + FVQDN S S +RGLHFQ
Sbjct: 7 KIKDCLLLEPNVFEDERGSFIESFKKQNLENALGFKIDFVQDNISISKKW-VLRGLHFQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Y+QAKL+ + GR+ D+ VD+R++S TYG +E+ + + ++IP G AHGF++L
Sbjct: 66 NDYSQAKLINVVRGRVLDVVVDLRKDSATYGQHFKIELDSIDRKLLFIPKGMAHGFLSLA 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+T YK +Y+ + G+ + D + I W +SEKD L
Sbjct: 126 DDTIFSYKCDAYYNQAAEGGIFYNDPDLAIDWEYPGNRF-ILSEKDLQLTPFK 177
>gi|116629771|ref|YP_814943.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Lactobacillus
gasseri ATCC 33323]
gi|300361535|ref|ZP_07057712.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus gasseri JV-V03]
gi|311110586|ref|ZP_07711983.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus gasseri MV-22]
gi|116095353|gb|ABJ60505.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus gasseri ATCC
33323]
gi|300354154|gb|EFJ70025.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus gasseri JV-V03]
gi|311065740|gb|EFQ46080.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus gasseri MV-22]
Length = 202
Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + + G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQS-SSTKGVLRGLHFQ-KK 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQIKLVRAVRGSVFDVAVDLRSESKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D +++E+D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPHLKGDYPGSPDASGYTLDDGTKLNMAERD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L F++
Sbjct: 191 QEWKGLKD---TFKF 202
>gi|257468314|ref|ZP_05632410.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium ulcerans ATCC
49185]
gi|317062592|ref|ZP_07927077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium ulcerans ATCC
49185]
gi|313688268|gb|EFS25103.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium ulcerans ATCC
49185]
Length = 193
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 82/176 (46%), Positives = 109/176 (61%), Gaps = 6/176 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + IL+ F D RG+F +TY+ K +E+G+ + FVQDNHS S G +RGLHFQ
Sbjct: 11 IEGLYILEPTIFGDERGFFLETYNKKEFEEIGIFEEFVQDNHSKS-KKGVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q KLVR + G ++D+AVDIR+NS TYG W +E+SA N +IP GFAHGF+TLE
Sbjct: 69 HPQGKLVRVLKGSVYDVAVDIRKNSSTYGKWYGIELSAENKKIFFIPKGFAHGFLTLEDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQ 174
TE YK TDFY ++DSG+ W DK I+I W +SEKD+ +
Sbjct: 129 TEFQYKCTDFYMPQYDSGIMWNDKEININWNFEKYGLKEEGIVLSEKDKKHQTFKE 184
>gi|257452250|ref|ZP_05617549.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_5R]
gi|317058793|ref|ZP_07923278.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium
sp. 3_1_5R]
gi|313684469|gb|EFS21304.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium
sp. 3_1_5R]
Length = 470
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 6/180 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+ T KFED RG+FS+ Y KELG+QD F+Q+N S+S GT+RGLHFQ
Sbjct: 10 ELEGVYIIDTLKFEDERGYFSEIYQKDCFKELGIQDDFIQENISYS-KKGTLRGLHFQTK 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KL+R + G+I+D+ VD+R NS TYG + +E+ + ++IP G AHGF++L+
Sbjct: 69 K-KQGKLLRVLKGKIYDVIVDLRENSKTYGQHIGIELQGQDQKLLWIPPGCAHGFLSLDE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQIDS 177
V Y+ T+ Y+ E++SG+ W D ++I W L + +SEKD+ +
Sbjct: 128 KNVVQYQCTENYAAEYESGILWSDTDLNIDWKLKEYGILKEELIISEKDRRQKSFEDYEK 187
>gi|38493079|pdb|1UPI|A Chain A, Mycobacterium Tuberculosis Rmlc Epimerase (Rv3465)
Length = 225
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 26 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSA-GVLRGLHFA 84
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 85 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLAL 144
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ N+ V+Y + Y+ + + + D ++ + WPL+D PS+S++D P +
Sbjct: 145 QDNSTVMYLXSAEYNPQREHTIXATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV 200
>gi|160876120|ref|YP_001555436.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS195]
gi|160861642|gb|ABX50176.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS195]
gi|315268317|gb|ADT95170.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS678]
Length = 179
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQ-DVFVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ G + VFVQ+NHS S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSYFDACFAQRGFESFVFVQENHSRSQR-NVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQR Q KLVR AG IFD+AVDIR +S TYG WV +SA N LQ++ P GFAHGF
Sbjct: 66 HFQRRK-PQGKLVRVCAGSIFDVAVDIRSDSATYGKWVGRVLSAENHLQMWTPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L EVIY+ T +Y E + VAW I WPL P +S +D
Sbjct: 125 YVLSDYAEVIYQCTQYYDPEDEGVVAWNSAEFAIDWPL--IAAPILSARDSLA 175
>gi|170586408|ref|XP_001897971.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brugia malayi]
gi|158594366|gb|EDP32950.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Brugia malayi]
Length = 188
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 5/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ +++++ + F D+RG+F ++Y+ L LG + F QDNHS+S G +RGLH Q
Sbjct: 14 IDGLKLIRPKLFPDTRGYFVESYNEYELGALGFSEKFKQDNHSYSKC-GVLRGLHAQP-- 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV I+G I+D+AVDIR S T+G W + + +IP GF HGF L
Sbjct: 71 -GMGKLVSVISGEIYDVAVDIRSMSKTFGKWYGVVLDEKTRTAFWIPDGFLHGFYVLSEE 129
Query: 123 -TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
V YK T Y+ + + GV D + I W + ++ +S++D++ L
Sbjct: 130 GAHVTYKCTAIYNEQVEFGVNPFDPELAIDWHISNSYKLIISDRDRSHQNLK 181
>gi|227894122|ref|ZP_04011927.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus ultunensis DSM
16047]
gi|227864067|gb|EEJ71488.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus ultunensis DSM
16047]
Length = 202
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RG+F +T++ + + + G FVQDN S S G +RGLHFQ
Sbjct: 13 IEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQS-SSTKGVLRGLHFQ-KH 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KLVR + G +FD+AVD+R +S TYG W +E++A N Q IP GFAHGF+ L
Sbjct: 71 YPQVKLVRAVRGDVFDVAVDLRSDSKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDV 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWP----------------LLDTILPSVSEKD 166
E YKV DF+ + G+AW D I I WP L D ++ ++D
Sbjct: 131 AEFCYKVNDFWHPNDEGGMAWNDPEIGIKWPHVKGDYPGSADASGYTLDDGTKLNLVDRD 190
Query: 167 QNLPFLNQIDSPFEY 181
Q L + F++
Sbjct: 191 QEWKGLKE---TFKF 202
>gi|16329495|ref|NP_440223.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|1651977|dbj|BAA16903.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
Length = 189
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 63/173 (36%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I +R + + D RG+ ++ + ++ LKE+G Q NH+ + GT+RG+H+Q
Sbjct: 12 LGIAGLRTVIRQPIGDRRGFLARLFCAEELKEVGWHKPIAQINHTHTAQGGTVRGMHYQN 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP A+ KLV CI G+++D+AVD+R +SPT+ W + +SA+N + IP G AHGF L
Sbjct: 72 PPSAEMKLVTCIRGQVWDVAVDLRVDSPTFLTWQGVVLSADNNRALLIPEGCAHGFQALS 131
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ E+IY + Y+ + G+ QD + I WP + +S++DQN P L+
Sbjct: 132 DDVELIYCHSVAYNPMAEGGLNPQDPRLGIEWP---QAITELSQRDQNHPLLD 181
>gi|288921330|ref|ZP_06415612.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
gi|288347304|gb|EFC81599.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
Length = 185
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 3/169 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ V I+ F D+RG F++T+ + GL+ Q + +++ GT+RG+H+ P
Sbjct: 9 DGVTIVDVEAFTDARGLFARTFCADEFAAAGLEVSVAQCSVAYNRLAGTVRGMHWAGEPV 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
+ KLVRC G + D+ VD R SPTY V++E++A+N ++I G AHG+ TL +T
Sbjct: 69 RETKLVRCTRGALLDVVVDTRPGSPTYLEHVAVELTADNHRALFISAGLAHGYQTLVDDT 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E Y++ ++ HD G+ + D + I WPL + +S+KD+ P L
Sbjct: 129 EATYQMNVPFTPGHDRGLRFDDPRLGIAWPLP---VSVISDKDRAWPLL 174
>gi|226944850|ref|YP_002799923.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azotobacter vinelandii DJ]
gi|226719777|gb|ACO78948.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azotobacter vinelandii DJ]
Length = 186
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + +++++ R+F DSRG+ ++ + ++ L G Q NH+F+ GT+RG+HFQR
Sbjct: 9 LPLAGLKLVERRRFGDSRGFLARLFCAEELAATGWLQPIAQINHTFTTWRGTVRGMHFQR 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+A+AKLV C+ G ++D+AVD+R SPT+ W + +SA+N + IP GFAHGF TL
Sbjct: 69 PPHAEAKLVTCLQGEVWDVAVDLRAGSPTFLHWHAERLSADNARALLIPEGFAHGFQTLT 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
++Y + Y+ + G+ QD+ + I WPL + +S +D P +
Sbjct: 129 NGAALLYCHSAAYAPGAEGGLHPQDERLGIAWPLE---IRELSVRDAMHPMVEGA----- 180
Query: 181 YDGLPL 186
++G+ L
Sbjct: 181 FEGVAL 186
>gi|163748892|ref|ZP_02156144.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella benthica KT99]
gi|161331666|gb|EDQ02471.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella benthica KT99]
Length = 181
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 102/173 (58%), Gaps = 3/173 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++L R ED RG F +T+ ++ FVQ+NHS S G +RGLHFQ P
Sbjct: 8 IAGLKLLSPRVHEDERGSFCETFRDSWFRQQIADVTFVQENHSRSIK-GCLRGLHFQ-SP 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+Q KL+ + G IFD+AVD+R++SP+ G W +SANN Q+++P GFAHGF
Sbjct: 66 RSQGKLIGVVVGEIFDVAVDLRQDSPSLGQWFGTYLSANNRQQMWLPAGFAHGFYVTSNA 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E+IYK TD+Y+ E + +AW D S+ I WPL + P +S KD + I
Sbjct: 126 AEIIYKCTDYYAPEFEKILAWDDASLAINWPLEGQV-PILSSKDNMGLSFDAI 177
>gi|126741343|ref|ZP_01757019.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [Roseobacter sp.
SK209-2-6]
gi|126717548|gb|EBA14274.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [Roseobacter sp.
SK209-2-6]
Length = 184
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 105/176 (59%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + V + + ED+RG F + +K+L E GL +VQ N S + GT+RG+H+Q
Sbjct: 9 LPLPGVFHYQPQLHEDNRGSFGRLSCAKMLDEAGLNSTWVQSNLSRTATRGTLRGMHYQT 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+A+ KL+ C++G+++D+ VD+R +SP+Y W S+ + +YIP G AHGF +L
Sbjct: 69 PPFAEVKLLTCLSGQVYDVLVDLRPSSPSYLQWTSIVLEGARADTLYIPAGIAHGFQSLS 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + Y + +S + +G++++D I I W L T +SE+D LPFL+ I
Sbjct: 129 DDVTLHYSHSQPFSPAYQAGISYRDPQIAIQWELPVT---LLSERDAALPFLSDIK 181
>gi|171912554|ref|ZP_02928024.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Verrucomicrobium spinosum DSM
4136]
Length = 183
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 97/176 (55%), Gaps = 3/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I++ D+RG+ ++TY GL + Q NH+ + G++RGLH+Q P
Sbjct: 8 IPEVMIVEPEPHHDARGFLARTYCEGEFACRGLNTRWPQQNHTLTKGRGSVRGLHWQADP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
++ KLVRC+AG D+ VD+R +SPT+G W E+SA + IYIP GFAHGF L
Sbjct: 68 ASEIKLVRCLAGCALDVVVDVRPDSPTFGTWELHELSAASRRAIYIPAGFAHGFQCLTDE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E+ Y +++ ++ G+ D ++ I WPL SE+D NLP + P
Sbjct: 128 CELFYLMSERHAPALARGLNASDPTLAIPWPLPVVNR---SERDVNLPLWSDFAKP 180
>gi|16265004|ref|NP_437796.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase protein
[Sinorhizobium meliloti 1021]
gi|15141143|emb|CAC49656.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase protein
[Sinorhizobium meliloti 1021]
Length = 187
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + +++ ++ D RG+FS+ + L++ G Q NH+ + GTIRG+HFQRPP
Sbjct: 19 LAGLTVIERKQMGDERGFFSRFFCRDELRDFGADGTISQINHTLTRAKGTIRGMHFQRPP 78
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ +AK V C+AG +FD+AVDIR +SPTY W +S N + IP GFAHGF TL N
Sbjct: 79 HDEAKFVSCLAGAVFDVAVDIRPDSPTYLQWHGEILSGENARSMMIPGGFAHGFQTLSEN 138
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E++Y Y+ + + G+ D + I+WPL + +SE+D+ F++
Sbjct: 139 CELVYLHDKPYAPDAEGGLNPLDPRLAISWPLE---VAQMSERDRAFAFIS 186
>gi|50882471|gb|AAT85650.1| RmlC [Escherichia coli]
Length = 154
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S +RG+H+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFFESFNQKVFEEAAGRKVEFVQDNHSKS-KINVLRGMHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR I+G ++D+AVD+R S T+G WV +E+S NN Q++IP GFAHGF LE
Sbjct: 66 TQNTQGKLVRVISGSVYDVAVDLREKSKTFGKWVGVELSGNNKRQLWIPEGFAHGFYVLE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKS 147
NTE +YK TD Y+ H+ + W D +
Sbjct: 126 ENTEFVYKCTDTYNPAHEHTLLWNDPT 152
>gi|158312833|ref|YP_001505341.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EAN1pec]
gi|158108238|gb|ABW10435.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EAN1pec]
Length = 207
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + R+ D RG F + + L+ + G + Q N S S GT+RG+H+
Sbjct: 6 LPIADAWLFTPRQHSDPRGTFLEWFRVDALESVTGHRLELAQANASVS-RAGTLRGVHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++GR+ D VDIR SPT+G ++ + + +Y+ G H FM L
Sbjct: 65 QVPPSQAKYVTCVSGRVLDCVVDIRVGSPTFGSHAAVLLDDVDRRGLYVSEGLGHAFMAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y + Y+ E + G+ D + + WP + P +SEKD P L+Q
Sbjct: 125 TDGAAITYLCSTPYTPEREFGINPLDPDLALPWP--AELTPLLSEKDTAAPTLSQA 178
>gi|320102995|ref|YP_004178586.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Isosphaera pallida ATCC
43644]
gi|319750277|gb|ADV62037.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Isosphaera pallida ATCC
43644]
Length = 199
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 8/196 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V + R F D RG F + ++ + + GL FVQDN S+S G +RGLHFQ P
Sbjct: 8 LPEVLRITPRVFYDDRGRFQELWNHERYAQAGLPVCFVQDNLSWS-RPGVLRGLHFQNPA 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM- 121
AQ KLV ++G IFD+AVD+R SPTYG WV +S+ N LQ++IP GFAHGF L
Sbjct: 67 -AQGKLVMVLSGAIFDVAVDVRIGSPTYGQWVGEHLSSENSLQLFIPQGFAHGFAVLGDQ 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID-SPFE 180
V YK T Y + + + W D + I WP + + P ++ KD+ L Q++ SP
Sbjct: 126 PALVAYKCTHPYRPDCERALVWNDADLAIAWP-DEVVEPILNPKDRAASTLRQLERSP-- 182
Query: 181 YDGLPLLSLNMERDLL 196
LP + R +
Sbjct: 183 -GALPQYDASPVRQVR 197
>gi|170743095|ref|YP_001771750.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium sp. 4-46]
gi|168197369|gb|ACA19316.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium sp. 4-46]
Length = 205
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+++ V I+ D RG F++ + ++ L E GL Q + S++ GT+RG+HF+ P
Sbjct: 7 DLSGVYIVDIDPRRDERGHFARIFCTQELAERGLIHHIPQISLSYNIKRGTLRGMHFKYP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY++ K VRC+ GRIFD+ VD+R S TY + E+SA NG +YIP AHGF+TLE
Sbjct: 67 PYSETKYVRCVRGRIFDVVVDLRPESRTYLGHLCAELSAENGRCLYIPERCAHGFITLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
++EV+Y ++ ++ + + G+ D + I WP+ +S +D P L +++
Sbjct: 127 DSEVMYMISAPHAPDGEGGLVHDDPRLAIPWPIPVE---VISRRDAEWPALAEVED 179
>gi|77457739|ref|YP_347244.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas fluorescens
Pf0-1]
gi|77381742|gb|ABA73255.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas
fluorescens Pf0-1]
Length = 186
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/174 (34%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + ++ ++FED RG F++ + LK G + Q NHS + + G++RGLH+Q
Sbjct: 9 LPLAGLFSVQHKRFEDQRGHFARLFCEGSLKAFGSEFHIRQINHSCTREKGSVRGLHYQN 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKL+ C+ G ++D+AVD+R +S T+ W + + A +G + IP GFAHGF TL
Sbjct: 69 ANAPEAKLITCLRGEVWDVAVDLRPDSETFLHWHAEHLKAGDGRSLLIPAGFAHGFQTLT 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ E++Y + Y+ EH+ G++ D + I WPL +S +D + P L+Q
Sbjct: 129 EDAELLYLHSADYAPEHEGGLSVNDPRLAIAWPLPVNN---LSARDSSHPALDQ 179
>gi|332296014|ref|YP_004437937.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermodesulfobium narugense
DSM 14796]
gi|332179117|gb|AEE14806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermodesulfobium narugense
DSM 14796]
Length = 181
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I+K++KF D+RG+F + + KE+G++ F QDN SFS G IRGLH+Q+ P
Sbjct: 10 IEGLIIIKSKKFFDNRGYFQEIFKDSDFKEMGIELDFSQDNLSFSKK-GVIRGLHYQKAP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y QAKLV+C+ G IFD VD+RR+S T+G + ++ + ++ +++P GF HGF L
Sbjct: 69 YGQAKLVKCVYGSIFDAVVDVRRDSKTFGKYFTVILHDSDDYLLFVPDGFLHGFCVLSDF 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V+YK + YS ++ SGV + D+ + I WP+ + P +S +D L +
Sbjct: 129 ALVLYKTSSEYSPKNSSGVIYNDQFLSIPWPVEN---PIISPQDAGLKSFKE 177
>gi|309812174|ref|ZP_07705932.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Dermacoccus sp.
Ellin185]
gi|308433861|gb|EFP57735.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Dermacoccus sp.
Ellin185]
Length = 200
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I+ ++ R+F D RG F + + L E G + VQ N S S GT+RG+HF
Sbjct: 6 LKIDGAYVVTPRQFPDGRGVFMEGFRGDKLAEHLGHRMDVVQSNISVS-SRGTVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK + ++G I D VDIR SPT+G W S+ + + +Y+ G H F L
Sbjct: 65 DVPPSQAKYITVLSGSIIDFIVDIRVGSPTFGQWESVVLDTSERKAVYLAEGLGHAFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E ++ +Y + Y+ E + G+ D ++ +T P D I P +S KD+ P L + +
Sbjct: 125 EDDSTAMYLCSAPYTPEREHGINPLDTTVGLTLP--DDIEPLLSPKDEAAPSLAEAE 179
>gi|72383078|ref|YP_292433.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
NATL2A]
gi|72002928|gb|AAZ58730.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
NATL2A]
Length = 196
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/185 (39%), Positives = 114/185 (61%), Gaps = 7/185 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-----FVQDNHSFSFDCGTIRGLH 57
+ + F D RG F ++++S++ +L L F+QDN SFS G +RGLH
Sbjct: 14 LEGPLVFSPCLFNDERGNFFESWNSQIFDDLLLNHDQGPQIFLQDNQSFSRK-GVLRGLH 72
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+Q P+ Q KLVRCIAG I+D+ VD+R +S T+ W S+ +SA N Q+++P GFAHGF+
Sbjct: 73 YQITPHVQGKLVRCIAGEIYDVIVDLRMSSKTFKSWGSINLSAQNKKQLWVPVGFAHGFL 132
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+L TEV+YK TD++ + + G++W D I I WP + + P +S+KD LP +++ S
Sbjct: 133 SLTDCTEVLYKTTDYWDPKCERGISWDDPDIKIIWP-ENFLHPELSKKDLMLPSFSELKS 191
Query: 178 PFEYD 182
++
Sbjct: 192 MDMFE 196
>gi|114563924|ref|YP_751438.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella frigidimarina
NCIMB 400]
gi|114335217|gb|ABI72599.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella frigidimarina
NCIMB 400]
Length = 189
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 7/169 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF-----VQDNHSFSFDCGTIRGLH 57
+ V I RKF D RG+F +T + +Q+ VQ+N S S + +RGLH
Sbjct: 8 LEGVMIFSPRKFIDERGFFMETLRQNSFSDAFIQNKMDVPLLVQENQSRSVN-NVLRGLH 66
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
FQ + Q KL+R G IFD+AVDIR+ S T+G W+ EIS NG Q++IP GFAHGF
Sbjct: 67 FQ-QHFPQGKLIRVARGTIFDVAVDIRQESKTFGQWIGQEISDENGYQMWIPAGFAHGFY 125
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
L ++IYK + +Y + + +AW D ++I WPL P VS+KD
Sbjct: 126 VLSDIADIIYKCSQYYQPDDEQTIAWNDPMLNIQWPLKQHPAPIVSDKD 174
>gi|262200610|ref|YP_003271818.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gordonia bronchialis DSM
43247]
gi|262083957|gb|ACY19925.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gordonia bronchialis DSM
43247]
Length = 206
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ L + D+RG F++ + + LL E +G + Q N S S G +RG+HF
Sbjct: 6 LSIDGAWELTPVQHGDARGLFAEAFKADLLAEVIGHRFELAQVNLSVSAA-GVLRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G D+ +DIR SPT+G ++ I + +Y+ G H L
Sbjct: 65 DVPPGQAKYVSCARGAFLDVIIDIRVGSPTFGAHDTVLIDDADRRAVYLSEGLGHAICAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E N+ V Y + Y+ + G+ D + I WP + +S KD P L +
Sbjct: 125 EDNSTVTYLCSAGYNPSAEHGINPLDPDLGIDWPTTGRDGTPLQYELSAKDTAAPGLFEA 184
>gi|303326678|ref|ZP_07357120.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio sp. 3_1_syn3]
gi|302862666|gb|EFL85598.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio sp. 3_1_syn3]
Length = 181
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
N ++ D RG+F +T+ + FVQDNHS S G +RG+H+Q
Sbjct: 9 NGPVLMIPAVHGDERGFFMETFRQNEFEAQCGPHAFVQDNHSKSRQ-GVLRGMHYQ-LRQ 66
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
Q KLVR I G+++D+AVD+R +SPT+G + + N +++P GFAHGF+ L
Sbjct: 67 PQGKLVRAIRGQVYDVAVDLRVSSPTFGKSFAALLDDVNHHMLWVPPGFAHGFLVLSSEA 126
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E IYK T +Y+ + + + W D ITWPLL VS KD+
Sbjct: 127 EFIYKCTTYYAPDDEYCLRWDDPVPGITWPLL-AKELVVSAKDREGLAFADCPKY 180
>gi|307309425|ref|ZP_07589084.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti
BL225C]
gi|306900155|gb|EFN30774.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti
BL225C]
Length = 179
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + +++ ++ D RG+FS+ + L++ G Q NH+ + GTIRG+HFQRPP
Sbjct: 11 LAGLTVIERKQMGDERGFFSRFFCRDELRDFGADGTISQINHTLTRAKGTIRGMHFQRPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ +AK V C+ G +FD+AVDIR +SPTY W +S N + IP GFAHGF TL N
Sbjct: 71 HDEAKFVSCLVGAVFDVAVDIRPDSPTYLQWHGEILSGENARSMMIPGGFAHGFQTLSEN 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E++Y Y+ + + G+ D + I+WPL + +SE+D+ F++
Sbjct: 131 CELVYLHDKPYAPDAEGGLNPLDPRLAISWPLE---VAQMSERDRAFAFIS 178
>gi|124021807|ref|YP_001016114.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
MIT 9303]
gi|123962093|gb|ABM76849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
MIT 9303]
Length = 201
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 10/182 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-----DVFVQDNHSFSFDCGTIRGLH 57
+N +L + D RG+F ++++ + +E+ FVQDNHS S G +RGLH
Sbjct: 14 LNGPLLLSPQVHGDERGFFFESWNQRRWQEVLASHRQEAPEFVQDNHSRSSC-GVLRGLH 72
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+Q PP+ Q KLVRC+ G IFD+A+D+RR+S TYG W +SA N Q++IP GFAHGF+
Sbjct: 73 YQLPPHPQGKLVRCVVGEIFDVAIDLRRSSATYGQWAGAHLSAENHQQLWIPVGFAHGFL 132
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLN 173
TL + EV+YK TDF+S + + + W D + I+WP++ D I S+S+KD +
Sbjct: 133 TLSESAEVLYKATDFWSRDCERAIRWDDPRLGISWPVVHVDGDQIPASLSQKDAVASLME 192
Query: 174 QI 175
++
Sbjct: 193 EL 194
>gi|119513241|ref|ZP_01632285.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like protein [Nodularia
spumigena CCY9414]
gi|119462108|gb|EAW43101.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like protein [Nodularia
spumigena CCY9414]
Length = 185
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ I+ K D RG+F++ + ++ GL+ Q N SF+ GT+RG+H+Q P
Sbjct: 8 LKDAFIVDVEKKPDHRGFFARGFCAQEFMAHGLKPTVAQCNISFNHKKGTVRGMHYQVSP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+ KLVRC G I+D+ +D+R SPT+ + +E++A N +Y+P FAHG+ TL +
Sbjct: 68 AAETKLVRCTKGAIYDVIIDMRPESPTFLSHIGVELTAENHRALYVPEMFAHGYQTLTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
EV+Y+V +FY+ ++ G+ + D I WPL T +SEKD N L
Sbjct: 128 AEVVYQVGEFYTPGYERGLRYNDPFFHIEWPLAVTE---ISEKDLNWTLLE 175
>gi|306818444|ref|ZP_07452167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris ATCC
35239]
gi|304648617|gb|EFM45919.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris ATCC
35239]
Length = 204
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + ++F D RG F + Y + +G VQ N S S G +RG+HF
Sbjct: 6 LKVPGAWEITPKQFPDERGAFMEMYKLGEFAKVVGHPLSLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGVWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y ++ Y+ + GV+ D + + +P D + +SEKD P L +
Sbjct: 125 EDDSTVVYLCSEGYNPGREHGVSPVDPEVGLVFPDKDLQGRPLQVLLSEKDTAAPSLAEA 184
>gi|126175069|ref|YP_001051218.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS155]
gi|125998274|gb|ABN62349.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS155]
Length = 179
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQDV-FVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ G + FVQ+NHS S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSYFDACFAQRGFESCVFVQENHSRSQR-NVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQR Q KLVR AG IFD+AVDIR +S TYG WV +SA N LQ++IP GFAHGF
Sbjct: 66 HFQRRK-PQGKLVRVCAGSIFDVAVDIRPDSATYGKWVGRVLSAENHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L EVIY+ T +Y E + VAW I WPL P +S +D
Sbjct: 125 YVLSDYAEVIYQCTQYYDPEDEGVVAWNSAEFAIDWPL--IAAPILSARDSLA 175
>gi|307700769|ref|ZP_07637794.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris
FB024-16]
gi|307613764|gb|EFN93008.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris
FB024-16]
Length = 204
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + ++F D RG F + Y + +G VQ N S S G +RG+HF
Sbjct: 6 LKVPGAWEITPKQFPDERGAFMEMYKLGEFAKVVGHPLSLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGAWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y ++ Y+ + GV+ D + + +P D + +SEKD P L +
Sbjct: 125 EDDSTVVYLCSEGYNPGREHGVSPVDPEVGLVFPDKDLQGRPLQVLLSEKDTAAPSLAEA 184
>gi|110589476|gb|ABG77247.1| dTDP-4-dehydrorhamnose 35-epimerase RbfC [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 163
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 66/160 (41%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Query: 18 RGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRI 76
RG+F +++++K ++ G FVQDNHS S +RGLH+Q Q KLVR G +
Sbjct: 5 RGFFLESFNAKAFQQATGSDVRFVQDNHSRSQR-NVLRGLHYQIQQ-PQGKLVRVAQGAV 62
Query: 77 FDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVE 136
FD+AVDIRR+SP++G WV +E++ N Q+++P GFAHGF+ L + + +YK TD+Y+ E
Sbjct: 63 FDVAVDIRRSSPSFGQWVGVELTEENHRQLWVPAGFAHGFVVLSESADFLYKTTDYYAPE 122
Query: 137 HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
H+ + W D I I WP+ +S KD+ L Q +
Sbjct: 123 HERCIRWDDPEIGIEWPI--NADLQLSSKDKEGLLLRQAE 160
>gi|304394676|ref|ZP_07376595.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ahrensia sp. R2A130]
gi|303293337|gb|EFL87718.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ahrensia sp. R2A130]
Length = 176
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++++ + +++ R D RG F++++ E GL + Q NHSF+ GT+RG+H+Q
Sbjct: 6 LSLDGLVLIEQRLMSDERGAFARSFCEDTFHEAGLHADYPQHNHSFNTRAGTVRGMHYQH 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+ + KLV+ + G I D+ VDIR+ S T+G +++E+S + +YIP GFAHGF TL
Sbjct: 66 APHEEVKLVQVLRGAIADVVVDIRKGSETFGQSLTVELSQDEATALYIPAGFAHGFQTLA 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+T V Y + + + ++G W D + DI WP + +S+KD P
Sbjct: 126 DDTLVTYLMGSRFVPDANTGFRWNDPAFDIFWP---REISVISDKDLAYPNF 174
>gi|269978074|ref|ZP_06185024.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris 28-1]
gi|269933583|gb|EEZ90167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris 28-1]
Length = 204
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + ++F D RG F + Y + +G VQ N S S G +RG+HF
Sbjct: 6 LKVPGAWEITPKQFPDERGAFMEMYKLGEFAKVVGHPLSLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGAWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y ++ Y+ + GV+ D + + +P D + +SEKD P L +
Sbjct: 125 EDDSTVVYLCSEGYNPGREHGVSPVDPEVGLVFPDKDLQGRPLKVLLSEKDTAAPSLAEA 184
>gi|227875184|ref|ZP_03993326.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris ATCC
35243]
gi|227844089|gb|EEJ54256.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris ATCC
35243]
Length = 204
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + ++F D RG F + Y + +G VQ N S S G +RG+HF
Sbjct: 6 LKVPGAWEITPKQFPDERGAFMEMYKLGEFAKVVGHPLSLVQANCSIS-KAGVVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D AVDIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 EVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGAWDSVLLEGEHRRAIYLSEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y ++ Y+ + GV+ D + + +P D + +SEKD P L +
Sbjct: 125 EDDSTVVYLCSEGYNPGREHGVSPVDPEVGLVFPDKDLAGRPLKVLLSEKDTAAPSLAEA 184
>gi|134102850|ref|YP_001108511.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Saccharopolyspora erythraea
NRRL 2338]
gi|291008758|ref|ZP_06566731.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Saccharopolyspora erythraea
NRRL 2338]
gi|133915473|emb|CAM05586.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Saccharopolyspora erythraea
NRRL 2338]
Length = 201
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I R F D RG F Y E G Q NHS S +RG+HF
Sbjct: 6 LEITGAFEFSPRSFPDHRGLFVAPYQEAAFVEATGHALRVAQTNHSVS-ARNVVRGVHFS 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK + C G + D +DIR SPT+G W ++ + + +Y+ G H F L
Sbjct: 65 DVPPGQAKYIYCAQGAMLDFVIDIRVGSPTFGRWEAVRLDSAEYRAVYLAEGLGHAFAAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+T V Y + Y+ + G+ D + + W LD P +S+KD++ P L +
Sbjct: 125 TDDTAVAYFCSTPYNPSAEHGINPLDPDLGLPWGDLDG-EPILSDKDRDAPGLAEA 179
>gi|148380673|ref|YP_001255214.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum A str.
ATCC 3502]
gi|153933465|ref|YP_001384957.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum A str.
ATCC 19397]
gi|153936831|ref|YP_001388427.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum A str.
Hall]
gi|148290157|emb|CAL84276.1| probable DTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium
botulinum A str. ATCC 3502]
gi|152929509|gb|ABS35009.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum A str.
ATCC 19397]
gi|152932745|gb|ABS38244.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum A str.
Hall]
Length = 177
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 2/171 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
V IL+ ED RG+F++T+ + K GL VQ N SF+ GT+RG+H+Q P
Sbjct: 7 KFKGVYILEIEPIEDERGFFARTWCEEEFKVYGLNSNLVQCNISFNKRRGTLRGMHYQIP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY +AKLVRC G I+D+ +D+R NS T+ W ++E++ N +YIP GFAHGF TLE
Sbjct: 67 PYEEAKLVRCTKGSIYDVIIDLRPNSKTFKQWTAIELTDENRKMLYIPEGFAHGFQTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+TEV Y+++ FY E G+ W D + + WP+ + +S KD+N
Sbjct: 127 DTEVFYQMSQFYHPECARGIRWDDLTFSVDWPVRGDV--IISYKDKNWGDF 175
>gi|225350715|ref|YP_002720693.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae
WA1]
gi|225216399|gb|ACN85132.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae
WA1]
Length = 177
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 66/172 (38%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI I++ ED RG+F + + + LK+ G+ Q N S+S GT+RG+H+Q
Sbjct: 7 NIEGAYIIQNNYIEDERGYFLRLFCNDELKKSGIDFEVKQSNMSYSAKKGTLRGMHYQIA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYA+ K+VRCI G++FD DIR++SPT+G ++E+S NG IYIP AHG TLE
Sbjct: 67 PYAEIKVVRCIKGKVFDAIADIRKDSPTFGQHFTVELSEENGKMIYIPPYVAHGIETLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
++ + Y V + + W D +I WP+ D + +SEKD+++P
Sbjct: 127 HSMICYFVGASFVPNAYGYLRWNDPFFNIDWPIKDNL--IMSEKDKSIPDFE 176
>gi|309789521|ref|ZP_07684104.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oscillochloris trichoides
DG6]
gi|308228487|gb|EFO82132.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oscillochloris trichoides
DG6]
Length = 176
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ I+ ++FED+RG+F+ T+ + GL VQ N S++ GT+RG+HFQ
Sbjct: 7 ELSGAYIIDLQRFEDNRGFFACTWEANEFAAQGLSTNVVQANLSYNRTKGTLRGMHFQHA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYA+ KL+RC+ G I D+ +D+R +S +Y W+S+E+SA+N +YIP GFAHGF TL
Sbjct: 67 PYAEVKLIRCVRGAIVDVIIDLRPDSESYKRWISVELSADNRRALYIPEGFAHGFQTLVD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ EV+Y+V+ FY+ GV + D + ITWPL + +S KD
Sbjct: 127 DVEVMYQVSQFYTPSAADGVRYDDPAFGITWPLPVSE---ISPKDAAWAAFA 175
>gi|300932789|ref|ZP_07148045.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium resistens DSM
45100]
Length = 241
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + R FED RG F + + ++ +LG Q N S S IRG+H
Sbjct: 30 LPIPGAWVYVPRVFEDDRGSFHEAFRAEQFTDKLGYPLNIAQSNLSRS-GANVIRGIHLA 88
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAKLV C+AG + D+ VD+R SPTYG + + ++ N +++P G HG +
Sbjct: 89 EVPPGQAKLVTCVAGGVTDVLVDLRIGSPTYGKHLQVPLNEQNNFALFVPLGVGHGVASE 148
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y VT+ Y E + G+ D ++ I WP+ + +SEKD P LN++
Sbjct: 149 QSGATLYYLVTEAYDPEREFGLHPFDATLSIDWPV-EQATAVLSEKDSTAPGLNEV 203
>gi|85860475|ref|YP_462677.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [Syntrophus
aciditrophicus SB]
gi|85723566|gb|ABC78509.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [Syntrophus
aciditrophicus SB]
Length = 201
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 66/184 (35%), Positives = 110/184 (59%), Gaps = 8/184 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I++ + EDSRG+F + + ++ + GL Q NH+++ + GT+RGLHFQ PP
Sbjct: 26 IEGLWIVQRKPIEDSRGFFCRFFCAEEFQTAGLNRPIAQINHTYTVNKGTVRGLHFQHPP 85
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ K+V C+ G ++D+AVDIR++SPT+ W +S N +IP GFAHGF L N
Sbjct: 86 HAEIKIVSCLQGEVYDVAVDIRKDSPTFLRWHGEILSVANQKSFFIPEGFAHGFQALTEN 145
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E++Y ++ + + + G+ +D I I WP+ + +S++D PF+N ++
Sbjct: 146 CELLYLHSEAFHPQAEGGLHVEDPKIGIAWPI---AVKELSQRDCAYPFIND-----DFK 197
Query: 183 GLPL 186
GL L
Sbjct: 198 GLSL 201
>gi|328545881|ref|YP_004305990.1| dTDP-4-dehydrorhamnose 3,5-epimerase [polymorphum gilvum
SL003B-26A1]
gi|326415621|gb|ADZ72684.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Polymorphum gilvum
SL003B-26A1]
Length = 179
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++PV ++ D RG F++ + ++ + GL Q N S S T+RG+HFQ
Sbjct: 7 ELDPVVEIRLSPRRDDRGAFTRLFCAEEFRAAGLAFALAQSNLSESRHRHTLRGMHFQYR 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
A+ K+V I GRIFD+A+D+R SP++G WV E+SA+ + IP GFAHGF+TLE
Sbjct: 67 EAAETKIVFPITGRIFDVALDLRAGSPSFGRWVGRELSADRRNALVIPKGFAHGFLTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+T V+Y V Y+ + GV W D I WP +S++D+ P +
Sbjct: 127 DTHVMYLVDAPYNGATEGGVRWDDPQFAIDWPHEP---AVISDRDRAHPDFS 175
>gi|257462294|ref|ZP_05626710.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D12]
gi|317059963|ref|ZP_07924448.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D12]
gi|313685639|gb|EFS22474.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D12]
Length = 191
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 106/178 (59%), Gaps = 6/178 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ + I+ + + DSRG+FS+ Y K ++G FVQDN+S S G +RGLHFQ
Sbjct: 10 SLRGLYIVTSPFYPDSRGFFSEMYHKKEFVKMGFTKEFVQDNYSCSKR-GVLRGLHFQ-K 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ Q KL+R + GRI D+ +D+R S ++G + S+E+SA N +YIP G AHGF++LE
Sbjct: 68 KHPQEKLLRVLKGRILDVVLDLRMGSESFGKYFSVELSAENQKMLYIPAGMAHGFLSLEE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQI 175
+T+V YK TDFY E ++G+ W D+ + I W L +SEKD+ +
Sbjct: 128 DTQVFYKCTDFYHPEEEAGILWNDRELAIDWKLEAYHLSEENLCLSEKDKQNMTFREF 185
>gi|167950764|ref|ZP_02537838.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 162
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 66/160 (41%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Query: 18 RGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRI 76
RG+F +++++K ++ G FVQDNHS S +RGLH+Q Q KLVR G +
Sbjct: 4 RGFFLESFNAKAFQQATGSDVRFVQDNHSRSQR-NVLRGLHYQIQQ-PQGKLVRVAQGAV 61
Query: 77 FDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVE 136
FD+AVDIRR+SP++G WV +E++ N Q+++P GFAHGF+ L + + +YK TD+Y+ E
Sbjct: 62 FDVAVDIRRSSPSFGQWVGVELTEENHRQLWVPAGFAHGFVVLSESADFLYKTTDYYAPE 121
Query: 137 HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
H+ + W D I I WP+ +S KD+ L Q +
Sbjct: 122 HERCIRWDDPEIGIEWPI--NADLQLSSKDKEGLLLRQAE 159
>gi|330468514|ref|YP_004406257.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Verrucosispora maris
AB-18-032]
gi|328811485|gb|AEB45657.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Verrucosispora maris
AB-18-032]
Length = 204
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++ DSRG F + Y L +E+G Q N S S +RG+HF
Sbjct: 6 LGIEGAWEITPQQHGDSRGLFLEWYRFDRLAEEVGHPLRLAQGNLSVSARH-VVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VD+R SPT+G W S+ + + +Y+ G HGF L
Sbjct: 65 DVPPGQAKYVTCVRGAVLDVVVDLRVGSPTFGEWESVRLDDVDRRAVYLAEGLGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y + Y+ + V D+ + I WP T P +S +D P L Q+
Sbjct: 125 TDDATLSYLCSTTYNPTAEHAVHPLDEELGIEWP---TGTPLLSARDAAAPNLAQV 177
>gi|92118278|ref|YP_578007.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14]
gi|91801172|gb|ABE63547.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nitrobacter hamburgensis X14]
Length = 183
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 71/184 (38%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + + ++ D+RG FS+ + + L Q N S + G IRG+H+Q P
Sbjct: 8 ISGLFVTESLALGDARGKFSRIFCERELAAAVGARTIRQANVSSTAVVGAIRGMHYQHAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+ K+VRCI GR+FD+AVD+RR SPT+ W E+S NG+ IP G AHGF LE N
Sbjct: 68 RAEMKIVRCIQGRVFDVAVDLRRGSPTFLHWHGAELSQENGMAFIIPEGCAHGFQVLEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+ ++Y T+FYS EH++GV D + I WPL T +S +D + P L++ +
Sbjct: 128 SSLLYFHTEFYSPEHEAGVRHDDPRVAIAWPLPPTN---LSVRDASHPPLDE-----SFQ 179
Query: 183 GLPL 186
G+ L
Sbjct: 180 GVSL 183
>gi|222147495|ref|YP_002548452.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium vitis S4]
gi|221734485|gb|ACM35448.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium vitis S4]
Length = 187
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +L +F D RG+ S+ + + L G +Q N + + GT+RGLHFQ P
Sbjct: 12 IPGLTLLTRSRFGDERGFLSRLFCGEELAAFGWPGPVLQVNETGTVQKGTVRGLHFQHAP 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + KLV C+ G I D+A+D+R+ S ++ V +E+S +N + IP GFAHGF L
Sbjct: 72 FGEWKLVTCVEGTILDVALDLRKGSSSFLQHVCVELSGDNCRSLLIPPGFAHGFQALSDT 131
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+IY + Y E + G+ QD I ITWPL +S +DQ+ P + +++
Sbjct: 132 VRMIYTHSAPYRAEAEGGLHPQDARIGITWPLPVER---LSARDQSHPLIQ-----PDFE 183
Query: 183 GL 184
GL
Sbjct: 184 GL 185
>gi|188588831|ref|YP_001922579.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E3 str.
Alaska E43]
gi|188499112|gb|ACD52248.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E3 str.
Alaska E43]
Length = 195
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 60/175 (34%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I++ F+D + + ++ Y+ K + G+ +FVQ+ S G ++G+HFQ+
Sbjct: 8 KMDGVYIIEPGVFKDEKEYCTEMYNKKQFLKAGINMIFVQEFEFESKK-GMLKGIHFQKQ 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q L++ G F +AVD+R S T+G W S ++ N Q+YIP GFAHGF+T+
Sbjct: 67 NN-QGSLIKVTKGEGFIVAVDLRYGSTTFGKWESFILNEENKKQVYIPEGFAHGFLTISD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
YK T+FY E + G+ W D I+I WPL +SEKD+ P ++
Sbjct: 126 EATFNYKCTEFYDPEDNRGIMWNDPDINIKWPLEKIENVILSEKDKLYPRFKDLN 180
>gi|238927143|ref|ZP_04658903.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas flueggei ATCC
43531]
gi|238884925|gb|EEQ48563.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas flueggei ATCC
43531]
Length = 182
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++ D RG F +T+ + + LGL F ++ S S G +RGLHFQ PP
Sbjct: 9 LPGCLRIRPVVRADQRGIFIKTFHVEEFRRLGLPTSFAEEYFSVSHC-GVLRGLHFQTPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K+V C G + D VD+R SPTYG + A G IYIP G AHGF L N
Sbjct: 68 MDHEKIVYCAQGEVLDAVVDLRCGSPTYGQHELFHLCAGEGTMIYIPKGMAHGFYVLSEN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
++Y+VT Y+ + D+GV W S I W + P +S +D P L++ SPF ++
Sbjct: 128 ALMMYQVTSVYAPDCDAGVRWD--SAGIPW---NAAHPILSARDALFPLLDEFVSPFVFE 182
>gi|307321335|ref|ZP_07600734.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti AK83]
gi|306892980|gb|EFN23767.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sinorhizobium meliloti AK83]
Length = 179
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 66/171 (38%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + +++ ++ D RG+FS+ + L++ G Q NH+ + GTIRG+HFQRPP
Sbjct: 11 LAGLTVIERKQMGDERGFFSRFFCRDELRDFGADGTIAQINHTLTRATGTIRGMHFQRPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ +AK V C+AG +FD+AVDIR +SPTY W +SA N + IP GFAHGF TL +
Sbjct: 71 HDEAKFVSCLAGAVFDVAVDIRPDSPTYLQWHGEILSAENARSMLIPGGFAHGFQTLSDS 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E++Y Y+ + +SG+ D + I+WPL + +SE+D+ F++
Sbjct: 131 CELVYLHDKPYAPDAESGLNPLDPRLAISWPLE---VAQMSERDRAFAFIS 178
>gi|217972671|ref|YP_002357422.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS223]
gi|217497806|gb|ACK45999.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS223]
Length = 179
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQ-DVFVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ G + VFVQ+NHS S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSYFDACFAQRGFESFVFVQENHSRSQR-NVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQR Q KLVR AG IFD+AVDIR +S TYG WV +SA N LQ++IP GFAHGF
Sbjct: 66 HFQRRK-PQGKLVRVCAGSIFDVAVDIRADSATYGKWVGRVLSAENHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +VIY+ T +Y+ E + VAW I WPL P +S +D
Sbjct: 125 YVLSDYADVIYQCTQYYAPEDEGVVAWNSAEFAIDWPL--IAAPILSTRDSLA 175
>gi|218662620|ref|ZP_03518550.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli
IE4771]
Length = 155
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 77/152 (50%), Positives = 101/152 (66%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ
Sbjct: 1 MAIEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRGLHFQI 60
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+AQ KLVRC+AGRI D+ VDIR SP++G W+S E+S + G Q++IP GFAHGF T+E
Sbjct: 61 PPFAQGKLVRCLAGRIMDVVVDIRVGSPSFGKWLSQELSPDTGKQLWIPPGFAHGFATIE 120
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITW 152
N+ + YKVT YS +HD G+AW D +I I W
Sbjct: 121 PNSVISYKVTAPYSPQHDRGIAWNDPAIGIRW 152
>gi|15077643|gb|AAK83288.1|AF355466_1 putative TDP-4-keto-6-deoxyglucose 3,5 epimerase [Saccharopolyspora
spinosa]
Length = 202
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + F D RG F + G Q NHS S IRG+HF
Sbjct: 6 LDITGAYEFTPKAFPDHRGLFVAPFQEAAFIDATGHPLRVAQTNHSVS-ARNVIRGVHFS 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G + D+ +DIR SPT+G W ++ + +Y+ G H F L
Sbjct: 65 DVPPGQAKYVYCPQGALLDVVIDIRVGSPTFGRWEAVRLDDTEYRAVYLAEGLGHAFAAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+T + Y + Y+ + G+ D + + W P +SEKD+ P L +
Sbjct: 125 TDDTVMTYLCSTPYTPGAEHGIDPFDPELALPW-SDLDGEPVLSEKDRTAPSLAEAADN 182
>gi|170692120|ref|ZP_02883284.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia graminis C4D1M]
gi|170143404|gb|EDT11568.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia graminis C4D1M]
Length = 183
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 64/154 (41%), Positives = 100/154 (64%), Gaps = 3/154 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+I++ + F D+RG+F +++++ E FVQDNHS S G +RGLH+Q
Sbjct: 10 LPEVKIIEPKVFGDARGYFYESFNAVEFAEHVEAGVTFVQDNHSRSAK-GVLRGLHYQI- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AQ KLVR + G +FD+AVDIR++SP +G WV + +S N Q+++P GFAHGF+ L
Sbjct: 68 QHAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVTLSMENHRQLWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL 155
+ + +YK TD++ EH+ + W D +I I WP+
Sbjct: 128 SAQFLYKTTDYWFPEHERSILWNDPAIGIKWPVD 161
>gi|309780789|ref|ZP_07675530.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia sp. 5_7_47FAA]
gi|308920471|gb|EFP66127.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ralstonia sp. 5_7_47FAA]
Length = 183
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 3/157 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V IL+ + F D+RG+F +++++K + G Q FVQDNHS S +RGLH+Q
Sbjct: 9 SLPEVLILEPKVFGDARGFFFESFNAKSFEVATGCQRAFVQDNHSRSAH-KVLRGLHYQV 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR +AG +FD+AVD+R++SP +G W +SA N Q+++P GFAHGF+ L
Sbjct: 68 VR-PQGKLVRVVAGEVFDVAVDLRKSSPNFGKWAGAVLSAENKRQLWVPEGFAHGFVVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT 157
+ E +YK TD++ EH+ V W D I I WP
Sbjct: 127 DSAEFLYKTTDYWYPEHERSVLWNDSDIGIEWPFKGE 163
>gi|291615352|ref|YP_003525509.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sideroxydans lithotrophicus
ES-1]
gi|291585464|gb|ADE13122.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sideroxydans lithotrophicus
ES-1]
Length = 186
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ + +++ + ED RG+ S+ Y + +E GL Q N + + G +RG+HFQ PP
Sbjct: 11 LSGLTLVQRKAIEDQRGFLSRFYCADEFREAGLTKAIKQINQTLTRKKGAVRGMHFQYPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y +AKLV C+ G IFD+AVD+R NSPT+ W +SA N + IP GFAHGF TL +
Sbjct: 71 YVEAKLVSCLHGEIFDVAVDLRSNSPTFLHWHGAILSAQNRQSLLIPEGFAHGFQTLTED 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E+IY T+ Y E + + + D + I WPL T +S++D N + Q ++
Sbjct: 131 CELIYLHTESYHPEAEGALNFADPKLGIVWPLATTE---ISDRDMNHKLIEQ-----DFQ 182
Query: 183 GLPL 186
G+ L
Sbjct: 183 GISL 186
>gi|240167895|ref|ZP_04746554.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium kansasii ATCC
12478]
Length = 183
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ +++++T D+RG F + + + L+ L Q NHS + G +RG+HFQ PP
Sbjct: 8 ISDLKVVQTLPHRDARGAFVRLFCANDLQSLLGHRQIAQINHSRTSHAGAVRGMHFQYPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ K+VRC++GR++D+AVD+R SPT+ W + E++ ++ + IP GFAHGF LE +
Sbjct: 68 HAEMKMVRCLSGRVWDVAVDLRSGSPTFLRWHAQELAPDDAQMLVIPEGFAHGFQVLEPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+E++Y T FY + G+ D + I WPL +S +D L+
Sbjct: 128 SELLYLHTAFYHPPSEGGLRHDDPRLAIAWPLPPRD---LSPRDLAHRLLD 175
>gi|48590|emb|CAA79352.1| WbbV [Yersinia enterocolitica]
gi|318605010|emb|CBY26508.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 187
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/182 (37%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I V + + R FED RG F ++++ +E +G Q FVQ N S+S IRGLH+Q
Sbjct: 6 LSIPEVILFEPRIFEDDRGHFFESFNLAKFQESIGRQVTFVQSNESYSKQ-NVIRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q KLVR + G +FDIAVD+R++SPT+G WV + +S N Q++IP GF HGF L
Sbjct: 65 -VIRPQGKLVRVVEGEVFDIAVDLRKSSPTFGQWVGVLLSDKNNHQLWIPEGFGHGFQVL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP--LLDTILPS---VSEKDQNLPFLNQ 174
+ + Y VTD++ EHD + + D I+I W ++ +S KD + L
Sbjct: 124 SPSAKFQYMVTDYWYPEHDRCIRFNDSDINIKWKEGIISEQQVIEYKLSSKDISGNSLAD 183
Query: 175 ID 176
+
Sbjct: 184 AE 185
>gi|254385131|ref|ZP_05000464.1| NDP-hexose-3-epimerase [Streptomyces sp. Mg1]
gi|194344009|gb|EDX24975.1| NDP-hexose-3-epimerase [Streptomyces sp. Mg1]
Length = 196
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + D RG + + + + G Q N + S G +RG+H+
Sbjct: 4 LSIEGAWSQEPVIHSDHRGRSHEWFRGERFRQAFGHDFPVAQVNVAVSHR-GALRGIHYT 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK C+ G D+ VD+R SPT+G W + + A +Y+ G F++L
Sbjct: 63 EIPPGQAKYSVCVRGAGLDVIVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ ++Y + Y+ E + V D + I WP I P +S++D+N P L +
Sbjct: 123 TDDATLVYLCSSGYAPEREHSVNPLDPDLGIVWP--ADIEPLLSDRDKNAPTLATAE 177
>gi|24575097|gb|AAL06668.1| dNTP-4-keto-6-deoxyglucose epimerase [Streptomyces globisporus]
Length = 192
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ + + F D RG F + + + + +G Q N + S G +RG+HF
Sbjct: 6 ISGAWTEEKQVFRDERGSFREWFQGEPFRRTVGHSFDLRQANCAIS-SHGVLRGIHFAGG 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
QAK C+ G +F VDIR SPT+G W ++E+ NG +Y+ G GF+TL
Sbjct: 65 VPGQAKYFSCLRGSVFGAVVDIRVGSPTFGGWRTVELGEENGRALYVSAGLGFGFLTLSD 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++Y + Y + G+ D + I WP I P +SE+D + P L +
Sbjct: 125 EAVIVYLCSAAYDPRLEHGLNPLDPEVGIAWP--PEITPILSERDSSAPGLAEA 176
>gi|123966644|ref|YP_001011725.1| dTDP-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
MIT 9515]
gi|123201010|gb|ABM72618.1| dTDP-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
MIT 9515]
Length = 185
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I IL+ + D+RG F+ Y K+ L + Q N S SFD T+RG+HFQ PP
Sbjct: 8 IAGAYILENDVYRDNRGSFTCFYIEDDFKKNNLNTKWTQINSSLSFDERTLRGIHFQYPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y+Q KLVR I G IFD+ VD+R S T+G ++ N +YI GF HGFMT+E N
Sbjct: 68 YSQIKLVRVIQGSIFDVIVDLRPKSKTFGKHFFYFLNEKNNKMLYIANGFGHGFMTMENN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T++IY V+ Y E++ + W DK ++I WP +S KD N N+I
Sbjct: 128 TKIIYNVSAPYKPEYEETIIWNDKLLNIQWP---NSPLKLSAKDLNGKTFNEIK 178
>gi|254468688|ref|ZP_05082094.1| dTDP-4-dehydrorhamnose 3,5-epimerase [beta proteobacterium KB13]
gi|207087498|gb|EDZ64781.1| dTDP-4-dehydrorhamnose 3,5-epimerase [beta proteobacterium KB13]
Length = 174
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 5/170 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V++++ FED RG+F ++++ +G + FVQDN S S G +RGLH+Q
Sbjct: 6 LKIPEVKLIEPDVFEDERGFFYESFNQHEFNNAIGQEISFVQDNQSKS-KKGVLRGLHYQ 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P++Q KLVR I+G++FD+AVDIR S TYG WV+ ++ N Q++IP GFAHGF++L
Sbjct: 65 KSPFSQGKLVRVISGQVFDVAVDIREGSETYGNWVAEVLTGENKKQLWIPEGFAHGFLSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
E +T YKV+++YS H+ + K ITWP LD +S+KD
Sbjct: 125 ENDTVFSYKVSNYYSSYHEVSINPFLKEFSITWPQLDY---LLSDKDLKA 171
>gi|54022170|ref|YP_116412.1| putative dTDP-6-deoxy-4-ketoglucose epimerase [Nocardia farcinica
IFM 10152]
gi|54013678|dbj|BAD55048.1| putative dTDP-6-deoxy-4-ketoglucose epimerase [Nocardia farcinica
IFM 10152]
Length = 182
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I ++ R F D RG F++ + + ++ G Q N S S G +RG+H+
Sbjct: 6 LSIPGAWVVTPRVFHDERGSFAEAFKASEFEKATGRPMDLRQVNCSVS-AAGVLRGIHYT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G D+ VD+RR SPTYG W S+ + + +++ G H ++L
Sbjct: 65 ENPPGQAKYVTCVRGAFLDVVVDLRRGSPTYGRWDSVLLDDVDRRSVFVSEGLGHAILSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLN 173
E ++ V Y + Y+ E D + D ++ I WP + S KD P +
Sbjct: 125 EDDSTVTYLCSLEYTPELDGEIDAFDPTLAIEWPRTGRDGRPLTYLRSPKDTAAPPFS 182
>gi|254774045|ref|ZP_05215561.1| hypothetical protein MaviaA2_05144 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 190
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 3/170 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+ D RG+ +++ ++ GL Q N F++ GT+RGLH P
Sbjct: 7 KVAGVTIIDLELRRDHRGFTWRSFCARDFAAHGLNLDVAQTNIVFNYTRGTVRGLHRTVP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+A+A L+RC G I AVD+R +S TYG V +E++A++ +++P AHGF TL
Sbjct: 67 PHAEATLLRCTRGAIVAAAVDVRPDSLTYGDHVMIELTADDHRTLFLPPYVAHGFQTLVD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
+TEV Y + ++ + G+ W D +TWP+ T +SE+D + P
Sbjct: 127 DTEVTYHTSGRHAAAEEQGLRWDDPEFGVTWPIPVT---VISEQDASWPS 173
>gi|323152428|gb|EFZ38716.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Escherichia coli EPECa14]
Length = 152
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 2/145 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V I + + F D RG+F ++++ K+ +E G + FVQDNHS S G +RGLH+Q
Sbjct: 7 EIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKS-SKGVLRGLHYQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLVRC+ G +FD+AVDIR++SPT+G WV + +SA N Q++IP GFAHGF+ L
Sbjct: 66 EPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHGFLVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQD 145
E +YK T++Y E + + W D
Sbjct: 126 EIAEFVYKTTNYYHPESEGCIKWDD 150
>gi|41407063|ref|NP_959899.1| hypothetical protein MAP0965c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395414|gb|AAS03282.1| hypothetical protein MAP_0965c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 190
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 3/170 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+ D RG+ +++ ++ GL Q N F++ GT+RGLH P
Sbjct: 7 KVAGVTIIDLELRRDHRGFTWRSFCARDFAAHGLNLDVAQTNIVFNYTRGTVRGLHRTVP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+A+A L+RC G I AVD+R +S TYG V +E++A++ +++P AHGF TL
Sbjct: 67 PHAEATLLRCTRGAIVAAAVDVRPDSLTYGDHVMIELAADDHRTLFLPPYVAHGFQTLVD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
+TEV Y + ++ + G+ W D +TWP+ T +SE+D + P
Sbjct: 127 DTEVTYHTSGRHAAAEEQGLRWDDPEFGVTWPIPVT---VISEQDASWPS 173
>gi|317403785|gb|EFV84265.1| DTDP-6-deoxy-L-mannose-dehydrogenase [Achromobacter xylosoxidans
C54]
Length = 183
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/172 (38%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I +++TR +D+RG F++ + + L + VQ N S + G +RG+HFQRPP
Sbjct: 8 IAGAVVVETRPHQDTRGAFTRLFCADALSAVIGSRQIVQINQSRTLHAGAVRGMHFQRPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLVRCI GR++D+ VD+R SPT+ W + E+ A + + IP G AHGF LE N
Sbjct: 68 HAEMKLVRCIRGRVWDVVVDLRAGSPTFLRWHAQELDAESARMLVIPEGCAHGFQVLEAN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+E++Y T +Y+ ++GV D + I WPL T +S +DQ L+
Sbjct: 128 SELLYLHTAYYTPYAEAGVRHDDPRLGIRWPLAATD---LSSRDQAHAPLSD 176
>gi|111225599|ref|YP_716393.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia alni ACN14a]
gi|111153131|emb|CAJ64878.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose
3,5-epimerase) (dTDP-L-rhamnose synthetase) [Frankia
alni ACN14a]
Length = 175
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
Query: 7 RILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQA 66
I+ F D+RG F++T+ ++ GL Q + +F+ GTIRG+H+ P +
Sbjct: 2 WIVDVEAFTDARGLFARTFCAEEFAAAGLAVEVAQCSVAFNAAAGTIRGMHWAGEPVRET 61
Query: 67 KLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126
KLVRC G + D+ VD R +SPTY V++E+SA+N ++I G AHG+ TL TE
Sbjct: 62 KLVRCTRGALLDVVVDPRPDSPTYLSHVAVELSADNHRALFIDAGLAHGYQTLADATEAT 121
Query: 127 YKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
Y++ ++ HD G+ + D + I WPL + +S+KD+ P L
Sbjct: 122 YQMNVPFTPGHDRGLRFDDPRLGIAWPLP---VSVISDKDRAWPLL 164
>gi|163792827|ref|ZP_02186804.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [alpha proteobacterium
BAL199]
gi|159182532|gb|EDP67041.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [alpha proteobacterium
BAL199]
Length = 180
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 97/171 (56%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ R+ D+RG+F +++ ++ L G Q N S + GT+RGLHFQ PP
Sbjct: 12 IAGLHVVVPRRLADTRGFFERSFCAQELTAAGWNTPVAQINQSVTEAAGTVRGLHFQHPP 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLVRC G +FD+AVD+R +SPTY W + +S +G + IP G AHGF TL
Sbjct: 72 HAEMKLVRCTQGSVFDVAVDLRPDSPTYRRWHAETLSDADGRGLLIPPGLAHGFQTLTTR 131
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
++Y + + E G+ D ++DI WP +S++D LPFL
Sbjct: 132 CRMLYVHSVAFHPESQGGIHPLDPTLDIAWPEPIE---LLSDRDAALPFLE 179
>gi|253583715|ref|ZP_04860913.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium varium ATCC
27725]
gi|251834287|gb|EES62850.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium varium ATCC
27725]
Length = 189
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/180 (47%), Positives = 110/180 (61%), Gaps = 6/180 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + IL+ F D RG+F +TY+ K +E+G+ + FVQDNHS S G +RGLHFQ
Sbjct: 11 IEGLYILEPTVFGDERGFFLETYNKKEFEEIGIFEEFVQDNHSKS-KRGVLRGLHFQ-TK 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
++Q KLVR I G ++D+AVDIR+ SPTYG W +E+SA N +IP GFAHGF+TLE
Sbjct: 69 HSQGKLVRVIRGAVYDVAVDIRKGSPTYGKWYGIELSAKNKKMFFIPKGFAHGFLTLEDE 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDSP 178
TE YK TD Y E+DSG+ W DK IDI W +SEKD+N +
Sbjct: 129 TEFQYKCTDLYHSEYDSGIMWNDKDIDINWNFEKYGLKEDDVVLSEKDKNHQIFKKYRKN 188
>gi|319426925|gb|ADV54999.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella putrefaciens 200]
Length = 179
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 100/173 (57%), Gaps = 9/173 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQD-VFVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ + GL VFVQDNHS S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSYFDDCLANRGLPAAVFVQDNHSRSQQ-NVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H+Q Q KLVR AG IFD+AVDIR NS TYG WV +SA+N LQ++IP GFAHGF
Sbjct: 66 HYQ-LLQPQGKLVRVCAGSIFDVAVDIRENSSTYGKWVGRILSADNHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +VIY+ TD+Y+ + + +AW I WPLL P +S +D +
Sbjct: 125 YVLSDYADVIYRCTDYYAPQDEYVLAWDHADFAIDWPLL--AAPILSTRDSDA 175
>gi|288941651|ref|YP_003443891.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Allochromatium vinosum DSM
180]
gi|288897023|gb|ADC62859.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Allochromatium vinosum DSM
180]
Length = 187
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ + D RGWF + + ++ L+ + VQ N S + GT+RGLH+Q PP
Sbjct: 12 LAGVVVVERQPIADERGWFERLFCARELESVTHGQPIVQINRSLTHRRGTVRGLHYQHPP 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ K+V C+ G IFD+AVD+R SPT+ W +SA +G + IP G AHGF TL +
Sbjct: 72 HAETKIVTCLRGEIFDVAVDLRAGSPTFLHWHGERLSAADGRMLVIPEGCAHGFQTLSDD 131
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
E+ Y T Y +SG+ +D +D+ WP + +S +D+ P L+ +++
Sbjct: 132 AELFYLNTAEYVPASESGLHPEDPRLDVRWP---GPITQLSSRDRGHPPLD-----PQFE 183
Query: 183 GLPL 186
GL L
Sbjct: 184 GLSL 187
>gi|87307565|ref|ZP_01089709.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Blastopirellula marina DSM
3645]
gi|87289735|gb|EAQ81625.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Blastopirellula marina DSM
3645]
Length = 176
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 6/170 (3%)
Query: 8 ILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAK 67
+++ R F+D RG F +T+ ++ + + FVQDN S S +RGLH+Q QAK
Sbjct: 2 LIEPRVFQDERGEFFETFQAERYRGIT-SVDFVQDNFSHSKQ-SVLRGLHYQI-ECPQAK 58
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
LV + G IFD+AVDIR+ SP +G WV + +S+ Q+++P GFAHGF + + +VIY
Sbjct: 59 LVSVLQGEIFDVAVDIRKGSPNFGKWVGVSLSSECRKQLFVPIGFAHGFCVISESADVIY 118
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
K +D Y + + W D + + WP+ P +S KD L +
Sbjct: 119 KCSDVYHPPGERTIQWNDPELAVEWPIK---TPLLSPKDAVALSLAEAPC 165
>gi|304409908|ref|ZP_07391527.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS183]
gi|307302385|ref|ZP_07582143.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica BA175]
gi|304351317|gb|EFM15716.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS183]
gi|306914423|gb|EFN44844.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica BA175]
Length = 179
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQDV-FVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ GL+ FVQ+NHS S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSYFDACFALRGLESCVFVQENHSRSQR-NVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQR Q KLVR AG IFD+AVDIR +S TYG WV +SA N LQ++IP GFAHGF
Sbjct: 66 HFQRRK-PQGKLVRVCAGSIFDVAVDIRPDSATYGKWVGRVLSAENHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L EVIY+ T +Y E +S VAW I WPL P +S +D
Sbjct: 125 YVLSDYAEVIYQCTQYYEPEDESVVAWNSAEFAIDWPL--ITAPILSTRDSLA 175
>gi|41581811|gb|AAS07755.1| putative dNTP-hexose 3,5-epimerase [Amycolatopsis mediterranei
S699]
Length = 214
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I+ ++ ++ F D RG F + Y +L + LG + F+Q N S S +RG+H
Sbjct: 14 LAIDGAHVVTSQSFGDERGDFFEVYRQDVLTEALGYRPRFLQTNVSTS-CRNVVRGVHGA 72
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P AK V C+ G + D VD+R SPT+G W + ++ + G +Y+ G H F++L
Sbjct: 73 MTPPGLAKFVTCLRGSLLDFVVDVRTGSPTFGQWDMIVLNQHGGTAVYVEEGLGHAFVSL 132
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T V Y ++D Y V D I + PL P +SE+D P L +
Sbjct: 133 EDDTCVQYLLSDLYRPAEVLTVQPLDPEIGL--PLNLPGEPILSERDAAAPTLREA 186
>gi|300782571|ref|YP_003762862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Amycolatopsis mediterranei
U32]
gi|2792336|gb|AAC01732.1| dNTP-hexose 3,5 epimerase [Amycolatopsis mediterranei S699]
gi|299792085|gb|ADJ42460.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Amycolatopsis mediterranei
U32]
Length = 206
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I+ ++ ++ F D RG F + Y +L + LG + F+Q N S S +RG+H
Sbjct: 6 LAIDGAHVVTSQSFGDERGDFFEVYRQDVLTEALGYRPRFLQTNVSTS-CRNVVRGVHGA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P AK V C+ G + D VD+R SPT+G W + ++ + G +Y+ G H F++L
Sbjct: 65 MTPPGLAKFVTCLRGSLLDFVVDVRTGSPTFGQWDMIVLNQHGGTAVYVEEGLGHAFVSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T V Y ++D Y V D I + PL P +SE+D P L +
Sbjct: 125 EDDTCVQYLLSDLYRPAEVLTVQPLDPEIGL--PLNLPGEPILSERDAAAPTLREA 178
>gi|257465949|ref|ZP_05630260.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium gonidiaformans ATCC
25563]
gi|315917105|ref|ZP_07913345.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium
gonidiaformans ATCC 25563]
gi|313690980|gb|EFS27815.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium
gonidiaformans ATCC 25563]
Length = 475
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 68/179 (37%), Positives = 109/179 (60%), Gaps = 6/179 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+ T KFED RG+FS+ Y ++LG+Q+ F+Q+N SFS GT+RGLHFQ
Sbjct: 10 ELEGVYIIHTVKFEDERGYFSEVYQKDSFRDLGIQENFIQENVSFS-KKGTLRGLHFQTK 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KL+R + G+I+D+ VD+R+ S TYG ++ +E+S+ + ++IP FAHGF++L
Sbjct: 69 K-KQGKLLRVLEGKIYDVIVDLRKESSTYGKYIGIELSSKDQNLLWIPPDFAHGFLSLAE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQID 176
+ Y+ TD Y +E++ G+ W D+ ++I W L + +SEKD+ +
Sbjct: 128 KNIIQYQCTDSYDMEYEEGILWSDQDLNIDWKLDEYGFSEEELIISEKDKKQKKFVDYE 186
>gi|80279139|gb|ABB52524.1| NDP-hexose-3-epimerase [Streptomyces sp. KCTC 0041BP]
Length = 196
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + D RG + + + ++ G Q N + S G +RG+H+
Sbjct: 4 LSIEGAWSQEPVIHSDHRGRSHEWFRGERFRQTFGHDFPVAQVNVAVSHR-GALRGIHYT 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK C+ G D+ VD+R SPT+G W + + A +Y+ G F++L
Sbjct: 63 EIPPGQAKYSVCVRGAGLDVIVDVRIGSPTFGRWEIVPMDAERNTAVYLAAGLGRAFLSL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ ++Y + Y+ E + V D + I WP I P +S++D+N P L +
Sbjct: 123 TDDATLVYLCSSGYAPEREHSVNPLDPDLGIVWP--ADIEPLLSDRDKNAPTLATAE 177
>gi|145590610|ref|YP_001152612.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pyrobaculum arsenaticum DSM
13514]
gi|145282378|gb|ABP49960.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pyrobaculum arsenaticum DSM
13514]
Length = 165
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F D+RG+F++ + GL FVQ N SFS +RGLH+Q P Q KLV +
Sbjct: 2 FPDARGFFAELWKRGEYLAAGLPYDFVQANLSFSKQ-YVVRGLHYQLKPSEQGKLVTVVK 60
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
GR+ D+AVDIRR SP YG +V++E+ ++IP GFAHGF LE T +Y VT Y
Sbjct: 61 GRVLDVAVDIRRGSPWYGRYVAVELEPGV--ALWIPPGFAHGFQALEE-TLFLYLVTKEY 117
Query: 134 SVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ + + W D I I WP D +SEKD P L + + FEY
Sbjct: 118 DQQRERCIGWDDPEIGIRWPAHDK--AILSEKDAKCPPLKEAEDNFEY 163
>gi|218663788|ref|ZP_03519718.1| putative methyltransferase [Rhizobium etli IE4771]
Length = 470
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 3/173 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+++ D RG F++T+ ++ GL V+ Q N S + GT+RG+H+Q P
Sbjct: 300 GAFVVEVEVRADDRGMFARTFCAESFAAHGLASVYPQCNLSQNHRRGTLRGMHYQADPKP 359
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
+AKLVR + GR+FD+A+D+RR SPTY W S+E+ A YIP G AHGF+TLE + E
Sbjct: 360 EAKLVRAVRGRVFDVALDLRRESPTYLKWASVELDATIHNAFYIPAGCAHGFLTLEDDCE 419
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ Y+++ Y E GV W D + I WP + +SE+D L +Q S
Sbjct: 420 LFYQMSAIYLPELARGVRWDDPAFSIAWPFTPS---VISERDVALESYSQEKS 469
>gi|312137739|ref|YP_004005075.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Rhodococcus equi 103S]
gi|311887078|emb|CBH46387.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Rhodococcus equi 103S]
Length = 198
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + R+F D RG F + + +G Q N S S G +RG+HF
Sbjct: 6 LKVPGAWEITPRQFGDHRGVFLEWFKDPGFSANVGRTLDLAQANCSVS-AAGVLRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G I D+ VD+R SPT+G W S+ + + ++I G HGF++L
Sbjct: 65 DVPPGQAKYVTCVRGAILDVVVDLRVGSPTFGQWDSVLLDDVDRRAVFISEGLGHGFLSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ VIY + Y+ + + V+ D I I WP++ ++ ++S+KD P L Q
Sbjct: 125 EDDSTVIYLCSTGYAPDREHEVSPLDPGIGIDWPVVGRDGSSLQWTLSDKDLAAPTLQQA 184
>gi|325675109|ref|ZP_08154795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
gi|325554070|gb|EGD23746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
Length = 201
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + R+F D RG F + + +G Q N S S G +RG+HF
Sbjct: 9 LKVPGAWEITPRQFGDHRGVFLEWFKDPGFSANVGRTLDLAQANCSVS-AAGVLRGIHFA 67
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G I D+ VD+R SPT+G W S+ + + ++I G HGF++L
Sbjct: 68 DVPPGQAKYVTCVRGAILDVVVDLRVGSPTFGQWDSVLLDDVDRRAVFISEGLGHGFLSL 127
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ VIY + Y+ + + V+ D I I WP++ ++ ++S+KD P L Q
Sbjct: 128 EDDSTVIYLCSTGYAPDREHEVSPLDPGIGIDWPVVGRDGSSLQWTLSDKDLAAPTLQQA 187
>gi|7329193|gb|AAF59933.1| dTDP-4-keto-6-deoxyglucose 3,5-epimerase [Streptomyces
antibioticus]
Length = 202
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++++ + D RG F + + + +++G Q N S S G +RG+HF
Sbjct: 4 LDVDGAWLYTPEIMRDERGEFLEWFRGRTFQEKIGHPLSLAQANCSVS-RKGVLRGIHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C +G + D+ VD+RR SPT+G W ++ + A +Y+ G H FM L
Sbjct: 63 DAPPGQAKYVTCASGTVLDVVVDVRRGSPTFGRWAAVRLDAARHQGLYLAEGLGHAFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V+Y + Y E + V D +I I WP I +S KD + P L Q
Sbjct: 123 TDDATVVYLCSQPYVAEAERAVDPLDPAIGIEWPT--DIDIVLSAKDTHAPSLAQA 176
>gi|172039920|ref|YP_001799634.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium urealyticum
DSM 7109]
gi|171851224|emb|CAQ04200.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium urealyticum
DSM 7109]
Length = 234
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + R F D+RG F + + + E G Q N S S +RG+H
Sbjct: 24 LPIAGAWLFAPRVFGDARGSFHEGFHAAQFTEHLGYPFDVAQANVSRS-SRDVVRGIHLA 82
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+AG + D+ VD+R SPT+G V + +S +N +++P G HGF+
Sbjct: 83 EVPPGQAKFVSCLAGEVVDVLVDLRVGSPTFGKHVKVALSESNNYAVHVPIGVGHGFVAR 142
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y VT+ Y+ + + GV D + I W + D +S+KD P L ++
Sbjct: 143 SETAVLNYLVTEAYNPDREFGVDPFDPELGIDWGV-DRADAVLSDKDAAAPALAEV 197
>gi|123968939|ref|YP_001009797.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
AS9601]
gi|123199049|gb|ABM70690.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
AS9601]
Length = 178
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYS--SKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I+ V ++T F D RG F + K K Q N S + GT+RGLH+Q
Sbjct: 6 SIDGVFEIQTDIFNDQRGSFINFFRSSEKAFKNCWFDKEIKQVNLSKNSFKGTLRGLHYQ 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PYA+ K+VRCI G ++D+AVD+R +S TY W +E+S I IP G AHGF L
Sbjct: 66 LNPYAEKKMVRCIKGCVWDVAVDLREDSSTYLSWHCVELSPKFANAIVIPEGCAHGFQVL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E ++E++Y + + E ++G+ W D I I+WPL ++SE+DQNLP+L++
Sbjct: 126 EEDSEILYLHSGDWIKESETGIRWNDPQIAISWPL---QAVNLSERDQNLPYLSE 177
>gi|317154956|ref|YP_004123004.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio aespoeensis
Aspo-2]
gi|316945207|gb|ADU64258.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfovibrio aespoeensis
Aspo-2]
Length = 183
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 61/169 (36%), Positives = 99/169 (58%), Gaps = 3/169 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + L+ F D RG F++ Y + L+ +GL+ Q N S + G+IRG+HFQ
Sbjct: 6 LPLAGAYRLEDAPFADQRGRFARIYCAHELESIGLRKPIAQANISLTRQKGSIRGMHFQT 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+A+ K++RC+ G +FD+ +D+R+ S TY W +S +Y+P GFAHGF +E
Sbjct: 66 VPHAEIKIIRCLHGAVFDVIIDLRKASETYLQWHGEILSPERAYALYVPEGFAHGFQVIE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
+ +++Y TDFY+ E + GV + D +I+I WPL +S+KD+
Sbjct: 126 EDAQLLYLHTDFYTPECEGGVRFDDPAINIAWPLPPRD---ISDKDRLH 171
>gi|251797830|ref|YP_003012561.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. JDR-2]
gi|247545456|gb|ACT02475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Paenibacillus sp. JDR-2]
Length = 182
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V +++ D+RG+F++ + KE GL++ F Q + S + GTIRG+HFQ
Sbjct: 7 SLAGVYLIEPEPISDNRGFFARAFCRNQFKERGLEENFQQWSISSNIHKGTIRGMHFQNL 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+A+ KL++CI G ++D+ VDIR++S TY W + ++ N +YIP G+AHGF TLE
Sbjct: 67 PFAENKLIQCIQGSVYDVVVDIRKDSKTYKQWEAFRLTGENHHMLYIPPGYAHGFQTLEP 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
++ + Y ++ Y +G + D + I W P +SE+D +L +
Sbjct: 127 HSTLYYHMSGIYDPSVQNGARYDDPAFHIKW---VYDNPVISERDAHLAPWSD 176
>gi|114777846|ref|ZP_01452777.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Mariprofundus ferrooxydans
PV-1]
gi|114551837|gb|EAU54377.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Mariprofundus ferrooxydans
PV-1]
Length = 183
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 8/185 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++ +T + D RG F++ + L + + VQ NHS + G +RG+H+Q
Sbjct: 7 KIAGVQVAETIRIADQRGAFARFFCENELAPVLGERHIVQINHSRTSQPGALRGMHYQHA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+A+ K+VRCI GR++D+AVD+RR+SPT+ W +E+SA N L + IP G AHGF LE
Sbjct: 67 PHAEMKMVRCIKGRVWDVAVDLRRDSPTFLQWHGVELSAENDLMMVIPEGCAHGFQVLEA 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+E++Y T Y+ + G+ D IDI WPL T +S++D++ P L++ Y
Sbjct: 127 ESELLYLHTARYTPTCEGGMRHDDPLIDIAWPLAVTD---ISDRDRSHPLLDE-----HY 178
Query: 182 DGLPL 186
G+ L
Sbjct: 179 SGVKL 183
>gi|90425693|ref|YP_534063.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisB18]
gi|90107707|gb|ABD89744.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisB18]
Length = 184
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++ D RG+F +T+ + + GL Q + S++ T+RGLHFQ P
Sbjct: 8 LAGCVLIEPDIIADERGYFLRTFCASTFEAHGLNPAIDQASLSYNRAQYTLRGLHFQAQP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + KLVR + G IFD+AVDIR +S T+ W + E++ N +YIP GFAHGF+TL
Sbjct: 68 HMEDKLVRVVNGAIFDVAVDIRTDSKTFARWYAAELTEQNQRALYIPRGFAHGFLTLTDE 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T V Y++ Y GV + D I + WP + +S++D++LP L ID
Sbjct: 128 TTVAYQIAQPYVASLARGVNFSDPQIAVRWPHPPS---VISQRDRDLPALAAID 178
>gi|218671520|ref|ZP_03521190.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium etli GR56]
Length = 180
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+++ D RG F++T+ ++ GL V+ Q N S + GT+RG+H+Q P
Sbjct: 10 GAFVVEVEVRADDRGMFARTFCAESFTAHGLASVYPQCNLSQNHRRGTLRGMHYQADPKP 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
+AKLVR + GR+FD+A+D+RR SPTY W S+E+ A + YIP G AHGF+TLE + E
Sbjct: 70 EAKLVRAVRGRVFDVALDLRRESPTYLKWASVELDATSRNAFYIPAGCAHGFLTLEDDCE 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ Y++++ Y E GV W D + I WP + +SE+D L Q
Sbjct: 130 LFYQMSEIYVPELARGVRWDDPAFSIAWPFTPS---VISERDVALASYRQ 176
>gi|118581747|ref|YP_902997.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter propionicus DSM
2379]
gi|118504457|gb|ABL00940.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter propionicus DSM
2379]
Length = 187
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + F+D RG F +TY+ K + G + ++ +S S G +RGLHFQ PP
Sbjct: 8 ISGCLEIVPVCFQDERGRFVKTYNEKTFESHGCCTDWKEEFYSVSRR-GVLRGLHFQLPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ KLV C AG + D VD+R+ SPTYG + LE+SA G +YIP G AHGF +
Sbjct: 67 HQHDKLVYCTAGTVLDAVVDLRKGSPTYGDHIMLELSAEKGNMLYIPRGLAHGFYVTSES 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
++YKV+ Y+ +HD+G+ W S I WP P +S KD LP L SPF +D
Sbjct: 127 ATMMYKVSSVYAPDHDAGIRWD--SAGIAWP---ASTPIISTKDGLLPPLIDFSSPFSFD 181
Query: 183 G 183
Sbjct: 182 D 182
>gi|330834783|ref|YP_004409511.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Metallosphaera cuprina Ar-4]
gi|329566922|gb|AEB95027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Metallosphaera cuprina Ar-4]
Length = 185
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 83/183 (45%), Positives = 112/183 (61%), Gaps = 8/183 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M I V ++ +++F DSRG+F + Y K F Q NHSFS G +RGLHFQ
Sbjct: 8 MEIPEVVLIISKQFSDSRGYFEELYKESDFKNYV-PCNFPQINHSFS-KKGVLRGLHFQL 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PYAQ KLV I G+IFD+ VD+R SPTY WVS+E++ ++IP GF HGF LE
Sbjct: 66 NPYAQGKLVTVIFGKIFDVGVDLRVGSPTYKKWVSVELTPGK--LLWIPAGFTHGFYALE 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ VIY VT +S +HDSG+ W D I++ WP D P +S+KD+NLP L + + F+
Sbjct: 124 E-SHVIYMVTKEFSKDHDSGIIWNDDEINVKWPAND---PMLSDKDRNLPRLRESKANFK 179
Query: 181 YDG 183
Y+
Sbjct: 180 YND 182
>gi|56751451|ref|YP_172152.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
6301]
gi|81298869|ref|YP_399077.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
7942]
gi|56686410|dbj|BAD79632.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
6301]
gi|81167750|gb|ABB56090.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus elongatus PCC
7942]
Length = 181
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V L ++ F+D RG F + + E Q N S + G IRGLH Q
Sbjct: 10 IAGVLELISQPFQDHRGAFLNAFREQEPAFAEAWGDRRIAQVNLSRTDRVGAIRGLHLQA 69
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+++AKLVRC+ GR++D+AVD+R++S TYG W ++E+S + IP G AHGF LE
Sbjct: 70 APHSEAKLVRCLRGRVWDVAVDLRQDSATYGQWQAVELSPEQANALLIPEGCAHGFQVLE 129
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
N+E++Y + + E ++G+ W D + I WPL + +S++D+ LPFL+
Sbjct: 130 ANSELLYLHSGTWVPEAETGIRWDDPQLAIAWPLP---MSELSDRDRALPFLS 179
>gi|153001398|ref|YP_001367079.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS185]
gi|151366016|gb|ABS09016.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella baltica OS185]
Length = 179
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 74/175 (42%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQDV-FVQDNHSFSFDCGTIRGL 56
+ V + + + F D RG+F +T+ G + FVQ NHS S +RGL
Sbjct: 7 ELAEVLVFEPQVFGDERGFFMETFRQSYFDACFAQRGFESCVFVQKNHSRSQR-NVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQR Q KLVR AG IFD+AVDIR +S TYG WV +SA N LQ++IP GFAHGF
Sbjct: 66 HFQRRK-PQGKLVRVCAGSIFDVAVDIRPDSATYGKWVGRVLSAENHLQMWIPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
L +VIY+ T +Y E +S VAW I WPL P +S +D
Sbjct: 125 YVLSDYADVIYQCTQYYDPEDESVVAWNSAEFAIDWPL--ITAPILSTRDSIASS 177
>gi|300728512|ref|ZP_07061871.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
gi|299774230|gb|EFI70863.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
Length = 185
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI +IL + F D+RG F + Y+ L + G++DVFVQDN S S G +RG+H Q
Sbjct: 7 NIKDAKILIPQLFTDTRGDFMEFYNENTLNKEGIKDVFVQDNIS-SSIKGVLRGVHTQ-L 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Y QAK+V C+ G I+D+ VD R +SPT+G W ++A+N Q+Y+P G AHG+ TL
Sbjct: 65 KYPQAKIVSCLKGIIWDVIVDCRIDSPTFGNWYGEFLTADNHKQLYVPQGVAHGYYTLSE 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
++ KVT Y+ + G W D+SI I WPL P ++EKD+N +
Sbjct: 125 -ATILMKVTTHYTPGDEIGFNWDDESIGIDWPLDCESEPILAEKDKNWGSFDD 176
>gi|300865163|ref|ZP_07109987.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oscillatoria sp. PCC 6506]
gi|300336853|emb|CBN55137.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oscillatoria sp. PCC 6506]
Length = 184
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + +D RG+F + Y + ++ GL ++Q+N SFS G IRGLHFQ+
Sbjct: 9 LKLQGTYQITLAPRKDDRGYFMRAYDEAIFRDHGLTTAWLQENQSFSKK-GVIRGLHFQK 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+A+ KLVR ++G+I D+ VD+R+NS TYG W S+E+S N YIP GFAHGF +L
Sbjct: 68 PPHAETKLVRVVSGKILDVFVDLRKNSNTYGQWDSIELSEENHKIAYIPKGFAHGFCSLT 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
V+YKV + Y E + + W D+++ I W + P S KD N SPF
Sbjct: 128 ETALVLYKVDEIYYPESEGNLRWNDETLAIKWTID---RPLTSSKDAQGESFNDFISPFV 184
>gi|254476304|ref|ZP_05089690.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruegeria sp. R11]
gi|214030547|gb|EEB71382.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruegeria sp. R11]
Length = 192
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 72/184 (39%), Positives = 99/184 (53%), Gaps = 16/184 (8%)
Query: 1 MNIN-----PVRIL----KTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG 51
M I V + K D RG F + + ++ E GL + Q N S S G
Sbjct: 1 MKIEPFAMEGVYRIGWSAKP----DPRGAFGRLFCAETFAEAGLVSQWAQTNLSRSTRRG 56
Query: 52 TIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTG 111
T+RG+H+Q P+A+ KL+ C+AGRI D+ VD+R S TYG W +LE+ +G +YIP G
Sbjct: 57 TLRGMHYQTAPFAETKLLVCLAGRIHDVLVDLRPQSATYGQWCALELDGASGSGVYIPEG 116
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
AHGF TL + + Y + YS H +GVA+ D + I WPL VSE+D LP
Sbjct: 117 IAHGFQTLSDDVMLHYSHSRPYSPAHQAGVAFDDPDLAIQWPLPPVA---VSERDLTLPR 173
Query: 172 LNQI 175
L +I
Sbjct: 174 LCEI 177
>gi|282892107|ref|ZP_06300582.1| hypothetical protein pah_c207o037 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498002|gb|EFB40346.1| hypothetical protein pah_c207o037 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 164
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 68/164 (41%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 14 FEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCI 72
F D+RG+F ++Y + E+G FVQDNHS S G +RGLH+Q Q KLVR +
Sbjct: 2 FRDARGFFLESYRASDFAQEIGAHKAFVQDNHSHSLQ-GVLRGLHYQYKK-PQGKLVRVV 59
Query: 73 AGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132
G IFD+AVD+R++SPTYG WV +SA ++IP FAHGF+ L + +V+YK TD+
Sbjct: 60 TGEIFDVAVDLRQSSPTYGKWVGRHLSAERPCSMWIPPEFAHGFLVLSSHADVLYKTTDY 119
Query: 133 YSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y + + W D + I WPL P +S+KD + ++
Sbjct: 120 YDPSSEFCLRWNDPQLAINWPL--QQPPMLSKKDTDGKLFKELP 161
>gi|45934787|gb|AAS79451.1| putative 3-epimerase in D-allose pathway [Streptomyces bikiniensis]
Length = 196
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + D RG + + + + G Q N + S G +RG+H+
Sbjct: 4 LSIEGAWSQEPVIHSDHRGRSHEWFRGESFRQAFGHDFPVAQVNVAVSHR-GALRGIHYT 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK C+ G D+ VD+R SPT+G W + + A +Y+ G F++L
Sbjct: 63 EIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ ++Y + Y+ + V D + I WP D I P +S++D+N P L +
Sbjct: 123 TDDATLVYLCSSGYAPAREHSVNPLDPDLGIAWP--DDIEPLLSDRDENAPTLATAE 177
>gi|7688729|gb|AAF67516.1|AF170880_23 NovW [Streptomyces caeruleus]
Length = 207
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + D RG F Y E G Q N S S G +RG+HF
Sbjct: 6 LGIEGVWEITPEQRADPRGVFLDWYHVDRFAEAIGRPLRLAQANLSVSVR-GVVRGIHFV 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G +FD+ VD+R SPTYGCW + + +Y+ G HGF +
Sbjct: 65 DVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAI 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y + Y + GV D + I WP T P +S +DQ+ L +
Sbjct: 125 SDEATLCYLSSGTYDPATEHGVHPLDPELAIDWP---TGTPLLSPRDQDALLLAEA 177
>gi|88192518|pdb|2C0Z|A Chain A, The 1.6 A Resolution Crystal Structure Of Novw: A
4-Keto-6- Deoxy Sugar Epimerase From The Novobiocin
Biosynthetic Gene Cluster Of Streptomyces Spheroides
Length = 216
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + + D RG F Y E G Q N S S G +RG+HF
Sbjct: 15 LGIEGVWEITPEQRADPRGVFLDWYHVDRFAEAIGRPLRLAQANLSVSVR-GVVRGIHFV 73
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G +FD+ VD+R SPTYGCW + + +Y+ G HGF +
Sbjct: 74 DVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAI 133
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y + Y + GV D + I WP T P +S +DQ+ L +
Sbjct: 134 SDEATLCYLSSGTYDPATEHGVHPLDPELAIDWP---TGTPLLSPRDQDALLLAEA 186
>gi|256005064|ref|ZP_05430034.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum DSM
2360]
gi|281418539|ref|ZP_06249558.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum
JW20]
gi|255990915|gb|EEU01027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum DSM
2360]
gi|281407623|gb|EFB37882.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum
JW20]
gi|316939208|gb|ADU73242.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum DSM
1313]
Length = 182
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I L R F D+RG F +T+ ++ + GL+ F ++ +S S G +RGLHFQ+P
Sbjct: 9 KIIGCYELIPRIFSDNRGRFVKTFHEEVFAQAGLETNFAEEYYSVSHK-GVLRGLHFQKP 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P K+V C+ G + D+ VD+R SPT G + +++++ IYIP G AHGF
Sbjct: 68 PREHTKVVYCVHGEVMDVVVDLRVGSPTCGKYDIFDLNSDKANMIYIPKGLAHGFYVKSN 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+IYKVT YS E+D+G+ W S+ I WP + P +SE+D+ LP ++ + F Y
Sbjct: 128 QAILIYKVTTVYSPENDTGIRWD--SVGIPWPNDN---PIMSERDRMLPAFEEMQNIFTY 182
>gi|300789778|ref|YP_003770069.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Amycolatopsis mediterranei
U32]
gi|299799292|gb|ADJ49667.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Amycolatopsis mediterranei
U32]
Length = 201
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ R F D RG F + + ++ G Q NHS S GTIRG+HF
Sbjct: 6 LSVPDAYEFSPRAFPDDRGLFVAPFQEDVFRDAVGHSLRLGQANHSVSRR-GTIRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G + D+ VDIR SPT+G W ++ + + +Y+ G HGF+ L
Sbjct: 65 DTPPGQAKYVYCPRGSLLDVVVDIRVGSPTFGRWDAVVLDSREFRAMYLAEGLGHGFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T + Y ++ Y+ + G+ D +D+ WP I +S+KD+ P L +
Sbjct: 125 EDDTVMTYICSEPYNPAGEHGITPLDPVLDLPWP--ADIAQVLSDKDRIAPTLAEA 178
>gi|258651651|ref|YP_003200807.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nakamurella multipartita DSM
44233]
gi|258554876|gb|ACV77818.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Nakamurella multipartita DSM
44233]
Length = 200
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + D RG F + + + L+E G Q N S S GT+RG+HF
Sbjct: 6 LQVPGAFEFTPVQHGDPRGVFLEWFKVERLEEAVGHPLTLAQANLSVS-RAGTLRGVHFS 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G + D VD+R SPT+G + + + +YI G H F+ L
Sbjct: 65 DVPPGQAKYVTCPRGAVLDYMVDLRVGSPTFGVCDVVRLDGEHRRAVYISEGLGHAFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E NT + Y + YS + GV D ++++ PL + + +S+KD P L +
Sbjct: 125 EDNTTLTYLCSTGYSPGREHGVNPLDPALNL--PLPEGVDFLLSDKDSAAPTLAEA 178
>gi|237786450|ref|YP_002907155.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium
kroppenstedtii DSM 44385]
gi|237759362|gb|ACR18612.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium
kroppenstedtii DSM 44385]
Length = 237
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I D RG F + Y + E F + + G +RG+H P
Sbjct: 21 IPGVFIFYPTVHADQRGSFHEWYKADDFAEALGYPFFPEQANMSVSARGVVRGIHLAEVP 80
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAK+V C AG + DI VD+R+ S TYG + + ++ +N +Y+P G HGF + N
Sbjct: 81 PGQAKMVTCPAGALSDIIVDLRKGSSTYGKHIVVPLNQDNHAVVYLPVGIGHGFAAHQDN 140
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPL-----------LDTILPSVSEKDQNLPF 171
T Y + Y + GV D ++ I T+ P SEKD+ P
Sbjct: 141 TVATYLTSTAYDPSREFGVRITDPALGIDCQALLNSDESSDQHSATVDPIFSEKDRIAPL 200
Query: 172 LNQIDS 177
L +D
Sbjct: 201 LADVDD 206
>gi|297570699|ref|YP_003696473.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arcanobacterium haemolyticum
DSM 20595]
gi|296931046|gb|ADH91854.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arcanobacterium haemolyticum
DSM 20595]
Length = 205
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I + ++F DSRG F + + + E +++ VQ ++ GT+RG+HF
Sbjct: 6 LSIEGAYRITPKQFPDSRGLFLEAFKQQTFVEAVGRELDVQQVNTSVSKAGTVRGIHFAE 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+QAK V C G + D VDIR SPT+G + S+ + + I+I G H F+ LE
Sbjct: 66 IAPSQAKYVMCPQGALLDFVVDIRVGSPTFGQYESVLLDDADRRAIFISEGLGHAFIALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFL 172
NT Y + Y+ + GV ++ I WP + + + +SEKD P L
Sbjct: 126 DNTVATYLCSAPYAPGREHGVKPTCSTLGIEWPTVDRHGNPMELLLSEKDTAAPGL 181
>gi|315636134|ref|ZP_07891388.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arcobacter butzleri JV22]
gi|315479495|gb|EFU70174.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arcobacter butzleri JV22]
Length = 190
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + + + +D+RG+ +++ + LG + F QDN S+S G IRGLH
Sbjct: 6 LEIPDLVLCEPTFHKDNRGFVYESFKKESFNNFLGFEVDFCQDNISYSTY-GVIRGLHTN 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Y+Q+KLV + G+I D+AVD R S ++G VS+E+++ Q++IP GF HGF L
Sbjct: 65 TLIYSQSKLVNVLKGKILDVAVDFRVGSLSFGKVVSMELNSEENKQLFIPRGFLHGFSVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ V+ K+ ++++ GV + D+ ++I W + + VSE D+NL I SPF
Sbjct: 125 SKDALVMIKIDRYFALGESIGVKYDDEDLNIDWKIKKESV-IVSEADKNLLAFKDIKSPF 183
Query: 180 EYD 182
Y+
Sbjct: 184 IYN 186
>gi|229492537|ref|ZP_04386340.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus erythropolis
SK121]
gi|229320523|gb|EEN86341.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus erythropolis
SK121]
Length = 201
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++F D+RG F + + S G Q N S S + G++RG+HF
Sbjct: 6 LKIAGAWEITPKQFGDNRGVFLEWFKSSAFTAATGRTLDLAQANCSVS-EAGSLRGIHFT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK + C+ G D+ VD+R SPT+G W ++ I + +++ G H ++L
Sbjct: 65 DNPPGQAKYITCVKGAFLDVVVDLRVGSPTFGEWDAVAIDDVDRRAVFLAEGLGHAILSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLN 173
E + V+Y + YS D + D + I WP + + +S KD P L
Sbjct: 125 EDGSTVMYLCSVEYSPHLDRDLDPFDPELAIEWPRTDRKGNPLTYELSAKDAAAPSLA 182
>gi|28492998|ref|NP_787159.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tropheryma whipplei str.
Twist]
gi|28572208|ref|NP_788988.1| epimerase [Tropheryma whipplei TW08/27]
gi|28410339|emb|CAD66725.1| putative epimerase [Tropheryma whipplei TW08/27]
gi|28476038|gb|AAO44128.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tropheryma whipplei str.
Twist]
Length = 207
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ +N + DSRG FS+ Y +L KE+G Q N SFS +RGLH+
Sbjct: 6 LKVNGCLEVTPEVHVDSRGSFSEVYRFDVLEKEIGYPLRVAQVNRSFS-KKAVLRGLHYS 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P++QAK V C G + D D+R SP++G W ++ + + +YIP G H F+ L
Sbjct: 65 LAPHSQAKYVMCANGAVLDFVFDLRLGSPSFGVWDAVLLDSVGCRAVYIPEGVGHAFIAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
V Y + Y E + + DK++++ +P + +SE+D P L +
Sbjct: 125 SKTATVNYLCSATYDPEREKSINPLDKNLNLEYPFTTPEI-VLSERDAAAPTLPEAQK 181
>gi|62737781|gb|AAX98197.1| sugar epimerase [Streptomyces aizunensis]
Length = 204
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + + +D RG F + + S+ + G + Q N S S G +RG+HF
Sbjct: 4 LSIEGAWLYEPLLHDDERGTFLEVFQSQAFELATGRRLELAQVNCSVS-RRGVVRGVHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VD+R SPTY W ++E+ + +++ G H F +
Sbjct: 63 DLPPGQAKYVTCVRGAVRDVIVDLRTGSPTYRAWEAVELDDRDRRAVFLSEGLGHAFQAI 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y T Y+ + GV D + ITW L + P +S KD P L +
Sbjct: 123 TDDATVVYLTTSGYAPGREHGVHPLDPELGITW--LPGMEPLLSPKDAVAPTLAVAE 177
>gi|89889756|ref|ZP_01201267.1| dTDP-4-dehydrorhamnose 3, 5-epimerase [Flavobacteria bacterium
BBFL7]
gi|89518029|gb|EAS20685.1| dTDP-4-dehydrorhamnose 3, 5-epimerase [Flavobacteria bacterium
BBFL7]
Length = 178
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
++ I+K F D RG+FS + + FV N SFS G +RGLH Q+
Sbjct: 7 SLKDCYIIKPPVFGDDRGYFSIRHDKNAFAKAFPQHPPFVLHNESFS-SYGVLRGLHLQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQAKLVRC+ G+I D+AVD R +SPTY S+E+S +N LQ+ +P GF HGF L
Sbjct: 66 GNAAQAKLVRCVQGKILDVAVDFRPDSPTYLQHFSIELSGDNHLQLLVPRGFLHGFSVLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
V Y+V + Y E + G+ + D +++I W + T +SEKD+ L +L
Sbjct: 126 ETAIVNYQVDNSYQPETEFGIRYDDPTLNIDWQIP-TTDIQLSEKDEKLGYLK 177
>gi|302532509|ref|ZP_07284851.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. C]
gi|302441404|gb|EFL13220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. C]
Length = 183
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + + D RG+F +T+ + +L+ +GL FVQD+ S S G +RGLH +
Sbjct: 9 IAGAYLFEPTPYADERGFFCRTFDADVLRSVGLDPHAFVQDSVSRSVR-GVLRGLHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC G +FD+ VD+R +SPT+ E+S +Y+P G AHGF L
Sbjct: 67 GAGEAKLVRCSYGSVFDVVVDLRPDSPTFRNRAFFELSGETQATLYVPAGCAHGFQALTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S++D+ P L++I
Sbjct: 127 TADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPVT---LMSQRDREAPSLSEI 177
>gi|68536977|ref|YP_251682.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium jeikeium
K411]
gi|260579322|ref|ZP_05847204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium jeikeium ATCC
43734]
gi|68264576|emb|CAI38064.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium jeikeium
K411]
gi|258602451|gb|EEW15746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium jeikeium ATCC
43734]
Length = 231
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + D RG F +++ ++ ++LG Q N S S +RG+H
Sbjct: 23 LPIPGAWAYVPKVHGDERGSFHESFKAEAFGEKLGYPFEVAQGNLSRS-SRNVVRGIHLA 81
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C++G I D+ VD+R SPT+G +++E+SA N +Y+P G HGF
Sbjct: 82 DVPPGQAKFVSCLSGAITDVLVDVRVGSPTFGQHITVELSAENNFSVYVPLGVGHGFRAH 141
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T V Y VT+ Y+ + + G+ D + + W + +S KD + P L+++
Sbjct: 142 TDQTTVNYLVTEAYNPQREYGIDPFDAELAVAWGVTKE-QAVLSTKDDSAPSLSEV 196
>gi|125975044|ref|YP_001038954.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum ATCC
27405]
gi|125715269|gb|ABN53761.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum ATCC
27405]
Length = 182
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I L R F D+RG F +T+ ++ + GL+ F ++ +S S G +RGLHFQ+P
Sbjct: 9 KIIGCYELIPRIFSDNRGRFVKTFHEEVFAQAGLETNFAEEYYSVSHK-GVLRGLHFQKP 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P K+V C+ G + D+ VD+R SPTYG + +++++ IYIP G AHGF
Sbjct: 68 PREHTKVVYCVHGEVMDVVVDLRVGSPTYGKYDIFDLNSDKANMIYIPKGLAHGFYVKSN 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+IYKVT YS E+D+G+ W S+ I WP + P +SE+D+ LP ++ + F Y
Sbjct: 128 QAILIYKVTTVYSPENDTGIRWD--SVGIPWPNDN---PIMSERDRMLPVFEEMQNIFTY 182
>gi|84496974|ref|ZP_00995828.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Janibacter sp. HTCC2649]
gi|84383742|gb|EAP99623.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Janibacter sp. HTCC2649]
Length = 197
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I ++ R+F D RG F +++ LL + G + +Q N S S GT+RG+HF
Sbjct: 6 LAIEGAFVVTPRQFPDDRGVFLESFRGDLLAQHLGHRPDIIQTNVSVS-SRGTVRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P Q K + +AG + D VD+R SPT+G + + +Y+ G H F L
Sbjct: 65 DIPPGQGKFITVLAGSLIDFIVDLREGSPTFGLVEQVLLDTVKRRAVYLTEGLGHAFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E T +Y T Y+ + G+ D I + + + ++S KD+ P L
Sbjct: 125 EDRTTAMYLCTATYNPATEHGIHPLDPEIGLQ--IPTDVETTLSAKDKAAPTLRAA 178
>gi|125625383|dbj|BAF46778.1| putative dTDP-4-keto-6-deoxyglucose 3,5-epimerase [Nocardia
brasiliensis]
Length = 186
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
M + D RG F +T+ + ++ G +Q N S S G +RG+H+
Sbjct: 6 MAVPGAWEFTPALHGDERGVFVETFKASEFEKAVGRTFDLLQVNTSTS-AAGVLRGIHYT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G D+ VD+R SPT+G W S I + +++ G H + L
Sbjct: 65 EDPPGQAKYVSCVRGAFLDVVVDLRPGSPTFGTWDSAVIDDVDRRSVFLSEGLGHALLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSV---SEKDQNLPFLN 173
E ++ V Y T Y+ E+D G+ D + I WP + P V S KD P L+
Sbjct: 125 EDDSTVNYLCTLEYTPEYDRGLDAFDPQLGIDWPTVGRDGRPLVFSRSPKDAAAPRLS 182
>gi|241207189|ref|YP_002978285.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861079|gb|ACS58746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 180
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ +++ D RG F++T+ ++ GL V+ Q N S + GT+RG+H+Q P
Sbjct: 9 SGAFVVEVDARSDDRGMFARTFDAQTFAAQGLVPVYPQCNISQNHKRGTLRGMHYQAQPR 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
+ KLVR GR+FD+AVD+R +SP+Y W S+E+ A YIP G AHGF+TLE N
Sbjct: 69 PEIKLVRATRGRVFDVAVDLRPDSPSYLKWASVELDAIRHNAFYIPAGCAHGFLTLEDNC 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
E+ Y++++ Y E GV W D + I WP + +SE+D L
Sbjct: 129 ELFYQMSEAYVPELARGVRWDDPAFSIGWPFPPS---IISERDAAL 171
>gi|229496960|ref|ZP_04390665.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas endodontalis
ATCC 35406]
gi|229316062|gb|EEN81990.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Porphyromonas endodontalis
ATCC 35406]
Length = 185
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V +L + F D RG F++ E F+Q+N SFS G +RGLH Q
Sbjct: 7 LEIPGVWLLTPQVFGDERGSFTEVLRFPEFAEKVSPCPFIQENESFS-TRGVLRGLHLQH 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQAKLVRCI G + D+AVD+R SPT+G V++ +S Q+YIP GFAHG++ +
Sbjct: 66 GSAAQAKLVRCIHGEVIDVAVDLRLQSPTFGRHVAVRLSGTTKQQLYIPRGFAHGYLVVS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPL--LDTILPSVSEKDQNLPFLNQ 174
YKV + YS + + + + I + W + +S KD L Q
Sbjct: 126 DEAIFSYKVDNGYSPQDECHLYPFEPEIGVDWLQYGVPREQLILSPKDLAGSSLQQ 181
>gi|269219067|ref|ZP_06162921.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral taxon
848 str. F0332]
gi|269211214|gb|EEZ77554.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral taxon
848 str. F0332]
Length = 203
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++F D RG F + Y S ++ G + Q N S S GT+RG+HF
Sbjct: 6 LKIPGAWEITPKQFPDDRGVFLEAYKSSAFEKAVGHRLDLRQANVSVS-KAGTVRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D A+DIR SPT+G W S+ + + IY+ G H F+ L
Sbjct: 65 DVPPSQAKYVVCPRGAVLDFAIDIRVGSPTFGQWDSVLLDDVDRRAIYLSEGLGHAFIAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E ++ V+Y + Y+ + GV+ + + +P + +SEKD P L +
Sbjct: 125 EDDSTVMYMCSAEYAPGREHGVSPVCPEVALDFPKTGRDGSPLELLLSEKDTAAPNLAEA 184
>gi|157384620|gb|ABV49598.1| NDP-hexose 3,(5)-epimerase [Streptomyces eurythermus]
Length = 211
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I +++ D RG F + + + + G VQ N + + G +RG+HF
Sbjct: 11 LGIEGAWVVEPEVHPDRRGEFHEWFQGERFRRATGHTLPLVQANVAVNRR-GALRGIHFT 69
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
R P QAK C+ G ++ VDIR SPT+G W ++ + +N +Y+ G F L
Sbjct: 70 RLPPGQAKYSACVQGAGIEVVVDIRTGSPTFGRWEAVPVDEHNRTAVYVAAGLGRAFFAL 129
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T +IY + Y+ D ++ D + I WP D I P +S +D P L + +
Sbjct: 130 TDRTTLIYLCSSGYAPRLDHAISPLDPGLAIAWP--DGIEPLLSAQDAGAPTLAEAE 184
>gi|116071140|ref|ZP_01468409.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Synechococcus
sp. BL107]
gi|116066545|gb|EAU72302.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Synechococcus
sp. BL107]
Length = 196
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 4/177 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ + F D+RGWF +++S + +G VF QDNHS S G +RGLH+Q P
Sbjct: 15 EGPLLMTPKCFGDNRGWFYESWSRRSFDNAVGETVVFSQDNHSRSIQ-GVLRGLHYQLAP 73
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAK+VR G IFD+AVDIR +SPT G W+ E+SA N Q++IP GFAHGF+TL
Sbjct: 74 EPQAKVVRATLGAIFDVAVDIRSSSPTCGAWIGAELSAENKAQLWIPEGFAHGFLTLSAV 133
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPL--LDTILPSVSEKDQNLPFLNQIDS 177
EV YK F++ + + W D ++ I WP L+ S+S KD P +
Sbjct: 134 AEVQYKARGFWNKACERALRWDDPTLAIDWPQGELNGNTISLSPKDAEAPDFLSAKT 190
>gi|37520039|ref|NP_923416.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gloeobacter violaceus PCC
7421]
gi|35211031|dbj|BAC88411.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gloeobacter violaceus PCC
7421]
Length = 184
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V +++ +E S G+F ++Y + G+ FVQ+ S S GT+RGLH+Q
Sbjct: 8 LPGVVVIEPAVYEQSCGYFFESYQRQKFAAAGISVSFVQEYRSRSAQ-GTLRGLHYQ-LH 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QA+L + G +F +A+D+R+ SP++G + +SA N Q+++P GFAHG + L
Sbjct: 66 RPQARLYTALHGELFAVAIDVRKGSPSFGQSAGVLLSAANKQQLFVPRGFAHGLLVLSQK 125
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E +YK +F+ + + GV W D ++ I W + + P +S +D+ L++ID
Sbjct: 126 AEFMYKCDEFFYPQDERGVLWSDPALGIAWRIEE---PVLSARDRCNLPLSRID 176
>gi|325002410|ref|ZP_08123522.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudonocardia sp. P1]
Length = 201
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I+ + + F D RG F+ + + +E G +Q N S S G +RG+H+
Sbjct: 6 LGISGAWLFEPTVFPDPRGRFTAPFQGPVFREALGFDLSVMQSNQSVS-SRGVVRGVHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK + AG + D+ VDIR SPT+G + +++ A++ +Y+ G H F +
Sbjct: 65 DVPPGQAKYLYIAAGAVRDVIVDIRVGSPTFGQFEVVDLDADSMRAVYLSEGLGHAFQAM 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T V Y + Y+ E + G+ D + I W + + P +SEKD+ P L + +
Sbjct: 125 TDGTVVGYLCSTSYAPEREHGITPIDPQLAIPW--VAGVEPVLSEKDREAPTLAEAE 179
>gi|310644323|ref|YP_003949082.1| dtdp-4-dehydrorhamnose 3,5-epimerase like protein [Paenibacillus
polymyxa SC2]
gi|309249274|gb|ADO58841.1| dTDP-4-dehydrorhamnose 3,5-epimerase like protein [Paenibacillus
polymyxa SC2]
Length = 177
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 73/166 (43%), Positives = 102/166 (61%), Gaps = 2/166 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V ++ D RG F++ + K GL+ FVQ N S++ GT+RGLH+Q PP
Sbjct: 8 LSGVYLIGLELLTDVRGHFARAWCQDEFKSHGLECSFVQCNISYNEKKGTLRGLHYQAPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y + K+VRC G I+D+ VD+R +SPTY W+S+E+S N +YIP GFAHG+ TL N
Sbjct: 68 YEEVKIVRCTKGSIYDVIVDLRPDSPTYKQWLSIELSDKNYKMLYIPKGFAHGYQTLSDN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
TEV Y+V+ Y E+ GV W D +I WP + +SEKDQN
Sbjct: 128 TEVFYQVSQMYKAEYARGVKWDDPEFNIEWP--EEEKRIMSEKDQN 171
>gi|157736946|ref|YP_001489629.1| putative hexose epimerase [Arcobacter butzleri RM4018]
gi|157698800|gb|ABV66960.1| putative hexose epimerase [Arcobacter butzleri RM4018]
Length = 190
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + + + +D+RG+ +++ + LG + F QDN S+S G IR LH
Sbjct: 6 LEIPDLVLCEPTFHKDNRGFVYESFKKESFNNFLGFEVDFCQDNISYSMY-GVIRALHTN 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Y+Q+KLV + G I D+AVD R S ++G VS+E+++ Q++IP GF HGF L
Sbjct: 65 TLNYSQSKLVNVLKGEILDVAVDFRVGSASFGKVVSIELNSEENKQLFIPRGFLHGFSVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ V+ KV +++++ GV + D+ ++I W + + VSE D+NL +SPF
Sbjct: 125 SKDALVMIKVDRYFALDESIGVRYNDEDLNIDWKIKKESV-IVSEADKNLLAFKDTNSPF 183
Query: 180 EYD 182
Y+
Sbjct: 184 MYN 186
>gi|209967225|ref|YP_002300140.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Rhodospirillum
centenum SW]
gi|209960691|gb|ACJ01328.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Rhodospirillum
centenum SW]
Length = 195
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I R+++ + D RG F++T+ + + G+ FVQ N S + GT+RG+HFQR P
Sbjct: 8 IAEARLVRLKAHRDDRGAFARTWCRQTFADAGIDFDFVQANWSVTRSRGTVRGMHFQRAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A++KLVR GR+ D+ VD+R SPT G SLE+ + +YIP G AHGF TL +
Sbjct: 68 HAESKLVRITRGRVHDVIVDLRAGSPTRGRLHSLELGEGDDTMLYIPAGVAHGFQTLTDD 127
Query: 123 TEVIYKV-TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V Y + + Y E+ G D ++ I WPL VS+KD + P L Q
Sbjct: 128 VTVEYFMGGEPYRPEYYDGFRHDDPAVAIRWPLPPGP---VSDKDLSWPPLAQ 177
>gi|218660783|ref|ZP_03516713.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli
IE4771]
Length = 156
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 99/148 (66%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ PP
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRGLHFQIPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP++G W+S E+S + G Q++IP GFAHGF T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIRVGSPSFGKWLSQELSPDTGKQLWIPPGFAHGFATIEPN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDI 150
+ + YKVT YS +HD G+AW D +I I
Sbjct: 128 SVISYKVTAPYSPQHDRGIAWNDPAIGI 155
>gi|312127312|ref|YP_003992186.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777331|gb|ADQ06817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caldicellulosiruptor
hydrothermalis 108]
Length = 202
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ED RG F + Y++ + L + + S IRGLHFQ PP
Sbjct: 10 IPGCFEFIPDIKEDQRGMFVKIYNTDFYSSILLNTSIKESYFTISHK-NVIRGLHFQLPP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y AK+V C+ G I D+ VD+R SPTYG + +SA +YIP G AHG+ L
Sbjct: 69 YEVAKIVCCVEGEIMDVVVDLREGSPTYGKYDIFYLSAEKSNILYIPEGLAHGYCVLSEK 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
VIY VT+ YS EHD+G+ W S+ I WP+ + P +SEKD+NLP +PF+Y
Sbjct: 129 AIVIYNVTNVYSKEHDTGIRWD--SVGIPWPVDN---PILSEKDKNLPEFKYFHTPFKYK 183
Query: 183 G 183
G
Sbjct: 184 G 184
>gi|302547048|ref|ZP_07299390.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces hygroscopicus
ATCC 53653]
gi|302464666|gb|EFL27759.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces himastatinicus
ATCC 53653]
Length = 183
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
I+ + + + D RG+F +T+ +++++ +GL FVQD+ S S G +RGLH +
Sbjct: 8 EISGAYLFEPTPYADERGFFCRTFDAEVVRSVGLDPDAFVQDSLSRSVR-GVLRGLHLR- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVRC G+IFD+ VD+R +SPTY E+S +YIP G AHGF L
Sbjct: 66 SGAGEAKLVRCSYGKIFDVIVDLRTDSPTYLGRAFFELSGETQTTLYIPAGCAHGFQALT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S++D+ P L +
Sbjct: 126 ETADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPATS---MSQRDREAPSLADV 177
>gi|332715750|ref|YP_004443216.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium sp. H13-3]
gi|325062435|gb|ADY66125.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium sp. H13-3]
Length = 175
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ T DSRG F++T+ + + L F Q + S S T+RGLHFQRP
Sbjct: 7 KIEGLWVVSTVPVRDSRGSFARTFCKREFESNALVSDFSQHSLSLSKLKHTVRGLHFQRP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ + KLV C+ G I+D+AVD+RR S TY WV + +SA+NG Q YIP GFAHGF +L
Sbjct: 67 PHQETKLVSCVKGSIWDVAVDLRRGSSTYLQWVGMVLSADNGAQFYIPEGFAHGFQSLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ V Y ++ Y+ +G+ + +I + WP + +SEKD P L
Sbjct: 127 DVAVSYLISAPYAEASAAGIRYDAPAIGVEWPAPPS---VISEKDLGWPAL 174
>gi|328887228|emb|CCA60467.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces venezuelae ATCC
10712]
Length = 183
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQR 60
I+ + + + D RG+F +T+ + +++ +GL FVQD+ S S G +RGLH +
Sbjct: 8 EISGAFLFEPTPYADERGFFCRTFDADVVRSVGLDPGAFVQDSVSRSVR-GVLRGLHLR- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVRC GRIFD+ VD+R +SPTY + E+S +Y+P G AHGF L
Sbjct: 66 SGAGEAKLVRCSYGRIFDVVVDLRADSPTYRNVATFELSGETQRTLYVPAGCAHGFQALT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S +D+ P L +
Sbjct: 126 DTADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPATS---MSPRDREAPRLAEA 177
>gi|300782492|ref|YP_003762783.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Amycolatopsis mediterranei
U32]
gi|299792006|gb|ADJ42381.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Amycolatopsis mediterranei
U32]
Length = 182
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 6/178 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
I+ + + D RG+FS+T+ ++ +G+ FVQD+ S S G +RG+H +
Sbjct: 8 EIDGAYLFEPTPHADQRGFFSRTFDRDVVASVGIDPDGFVQDSLSRSRK-GVVRGMHLRG 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVRC G IFD+ VD+R +SPT+ + E+S N + +YIP G AHGF +L
Sbjct: 67 GA-GEAKLVRCSHGAIFDVVVDLRPDSPTFRNVKTFELSGENQVSVYIPAGCAHGFQSLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
++V Y++ + E D ++++D +DI+WPL T+ VS++D+ P L + P
Sbjct: 126 DPSDVSYRIDRAHDPEEDITISYKDPELDISWPLSVTM---VSDRDERAPSLEEALKP 180
>gi|323525586|ref|YP_004227739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1001]
gi|323382588|gb|ADX54679.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1001]
Length = 183
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S+ ++ FVQD H G +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFGDESGFCYESFSADEFVDDVARGFDFVQDRHLR-AVHGVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L++ + G IFD+AVD+R NSP +G W +SA N Q+++P GFAHGF+ L
Sbjct: 68 QRPQGRLLQVVVGEIFDVAVDVRLNSPNFGKWCGAYLSAGNHRQVWVPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W D I I WP+ P V KD L + ++
Sbjct: 128 VAECLWKATEYWFPELERCIVWNDPDIGIEWPI--DFQPIVGAKDAAGRRLYEAEN 181
>gi|118469056|ref|YP_885893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium smegmatis str.
MC2 155]
gi|310947299|sp|A0QSK5|RMLC_MYCS2 RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthase
gi|118170343|gb|ABK71239.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium smegmatis str.
MC2 155]
Length = 201
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I + DSRG F + ++ E G Q Q N S S G +RG+HF
Sbjct: 6 LSIAGAWEITPVLRTDSRGLFFEWFTDAGFTEFAGHQFDMRQANCSVS-ARGVLRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G +FD+ VDIR SPT+G W ++ + + IYI G H F+ L
Sbjct: 65 QVPPSQAKYVTCVRGAVFDVVVDIRVGSPTFGQWDAVLLDDKDRRSIYISEGLGHAFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ ++ V+Y + Y+ + + V D I WP + +S++D P L +
Sbjct: 125 DDDSTVMYLCSAPYAPQREHTVRPTD--FGIEWP--EVPELILSDRDAQAPSLAEA 176
>gi|5305789|gb|AAD41820.1|AF147703_6 putative NDP-hexose 3-epimerase TylJ [Streptomyces fradiae]
Length = 205
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I +++ D RG F + S + L G Q N + S G +RG+HF
Sbjct: 8 LGIEGAWVIQPEIHPDRRGEFHAWFQSSEFRRLTGHSFSVPQVNIAVSRK-GALRGIHFS 66
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK C+ G ++ VDIR SPTYG W ++ + N +Y+P G F+ L
Sbjct: 67 EVPPGQAKYSACVQGAGVEVVVDIRLGSPTYGQWRAVPVDEYNRTAVYVPAGLGRAFVAL 126
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T ++Y + Y+ + V D + I WP + + +SE+D P L +
Sbjct: 127 TDRTTLVYLCSSEYAARREHAVNPLDPDLAIAWP--EDVELLLSERDTRAPTLAEA 180
>gi|581679|emb|CAA55578.1| dTDP-4-keto-6-deoxyglucose 3,5-epimerase [Streptomyces glaucescens]
gi|3256061|emb|CAA07389.1| StrM [Streptomyces glaucescens]
Length = 200
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I ++++R F D RG F + + L + LG Q N S S G +RG+HF
Sbjct: 4 LGIEGAWLVESRVFGDERGEFQELFRGGPLSDTLGYVPGVAQVNRSVSRK-GVVRGVHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VDIR SP YG W ++ + +YI G H FM L
Sbjct: 63 DVPPGQAKYVTCLRGAVLDVVVDIRAGSPAYGAWETVRLDD-PRRSVYIEAGLGHAFMAL 121
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ V+Y ++ Y+ E + V D ++ I WP I P +S KD P L +
Sbjct: 122 TDDATVVYLTSEGYAPEREHAVHPLDPALGIAWP--PGIEPVLSAKDSRAPGLEE 174
>gi|239983229|ref|ZP_04705753.1| dTDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces albus J1074]
gi|291455061|ref|ZP_06594451.1| dTDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces albus J1074]
gi|291358010|gb|EFE84912.1| dTDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces albus J1074]
Length = 220
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ ++ + + F D RG F +Y + E G Q +HS S G +RG+HF
Sbjct: 29 LRVSGAFVFTPQVFHDDRGMFVDSYQLPVFAETAGRPFPLFQASHSRS-RRGVVRGVHFT 87
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P AK V C AGR D+ VD+R SPT+G W S+ + A Y+P G H F+ L
Sbjct: 88 SAPPGMAKYVHCAAGRALDLVVDLRVGSPTFGRWDSVVLDAARPRSTYLPVGVGHAFVAL 147
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T + Y ++ Y + V+ D ++D+ +PL P +S +D+ P L +
Sbjct: 148 EDDTMMTYLMSGGYVPRDEHAVSPLDPALDLPFPLDGD--PVLSARDRQAPTLAEA 201
>gi|88855648|ref|ZP_01130311.1| dTDP-4-dehydrorhamnose 3,5-epimerase [marine actinobacterium
PHSC20C1]
gi|88814972|gb|EAR24831.1| dTDP-4-dehydrorhamnose 3,5-epimerase [marine actinobacterium
PHSC20C1]
Length = 203
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + ++F D RG F + Y L+E +G Q N S S G +RG+H+
Sbjct: 6 LSVPDSYEITPKQFADDRGVFLEWYRFDKLEEVVGHPLDLRQANTSVS-QRGVVRGIHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P Q K V GR D VDIR SPTYG W S+ + A + +Y+ G H F+ L
Sbjct: 65 DVPPGQGKYVTVTHGRGIDFVVDIRVGSPTYGQWDSVILDAVDRRAVYVAEGLGHAFIAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ + Y V+D Y + + D I + +P + +S KD+ P L +
Sbjct: 125 TDDATLTYLVSDVYKPGAEHDINVLDPEIGLVFP-PELGDLVLSPKDKIAPTLAE 178
>gi|307635121|gb|ADN78402.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geobacter sulfurreducens
KN400]
Length = 186
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+N V ++ ED RG+FS+ + ++ +GL VQ NHSF+ GT+RG+HFQ PP
Sbjct: 11 LNGVYAIRRTVAEDHRGFFSRFFCAEEFTAIGLTAPIVQINHSFTRKMGTVRGMHFQHPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + K+V C+ G +FD+AVD+R S T+ W +++ N ++IP GFAHGF TL +
Sbjct: 71 HTETKIVSCLKGCVFDVAVDLRYGSETFLKWHGEILTSENRKSLFIPEGFAHGFQTLSED 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
E+IY T Y + + + D I I WPL + +S +D++ P +
Sbjct: 131 CELIYLHTSAYDLHSEGALNAIDPQIAIEWPL---AIAEMSNRDRSHPLI 177
>gi|296169862|ref|ZP_06851476.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295895539|gb|EFG75239.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 190
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 66/167 (39%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V I+ D RG+ S+++ + GL Q N F++ GT+RGLH + PPYA
Sbjct: 10 GVTIIDLEPQCDHRGFSSRSFCADEFASRGLAFDVTQTNIFFNYTRGTVRGLHHRVPPYA 69
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q +LVRC G I +AVDIR S TYG +E+SA+N +++P AHGF TL NTE
Sbjct: 70 QTQLVRCTRGAIAAVAVDIRPGSQTYGDHAMVELSADNYRALFLPPFVAHGFQTLVDNTE 129
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
V Y+V+ + + G W D I WPL T +SE+D + P
Sbjct: 130 VSYQVSGASAPSDEQGFHWNDPEFGIVWPLPVT---VISEQDASWPS 173
>gi|22255843|gb|AAM94768.1| CalS1 [Micromonospora echinospora]
Length = 190
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I ++ + D RG F + Y + E G Q N S S G IRG+H
Sbjct: 6 LTIEGSWLVTPEQHHDDRGLFLEWYQADRFTEAVGRPFRVAQSNVSVSGR-GVIRGIHLV 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P Q K + C++G + D+ VD+R SPT+G W + + + +++ G H F L
Sbjct: 65 DVPPGQDKYITCVSGAVLDVVVDLRVGSPTFGRWEGVRLDDVDRRAVHLDAGLGHAFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V+Y + Y + V D + I WP +S +D + Q
Sbjct: 125 TEPATVVYLCSSPYDPAAERTVNPLDPELGIAWPAGPRR---LSPRDATAQNVAQA 177
>gi|58430753|dbj|BAD89171.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp.
139]
Length = 191
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + F D RG+F +T+ + +++ G+ FVQD+ S S G +RG+H +
Sbjct: 9 IAGAFLFEPTPFADERGFFCRTFDADVVRSAGIDPDAFVQDSLSRSVR-GVVRGMHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC +GRIFD+ VD+R SPTY + E+S +Y+P G AHGF L
Sbjct: 67 GAGEAKLVRCSSGRIFDVVVDLRPGSPTYLGRATFELSGETQATLYVPAGCAHGFQALTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + + WPL T SE+D+ P L +
Sbjct: 127 TADTSYRIDRPHDPAEDVTIAFDDPELAVPWPLPVTTT---SERDRKAPGLAEA 177
>gi|297162967|gb|ADI12679.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces bingchenggensis
BCW-1]
Length = 183
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + + D RG+F +T+ + +++ +GL FVQD+ S S G +RGLH +
Sbjct: 9 IAGAYLFEPTPYADERGFFCRTFDADVVRSVGLDPDAFVQDSLSRSVR-GVLRGLHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC GRIFD VD+R +SPTY E+S + +YIP G AHGF L
Sbjct: 67 GAGEAKLVRCSYGRIFDTVVDLRTDSPTYRNRAFFELSDETQVTLYIPAGCAHGFQALTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+V Y++ + D +A+ D + I WPL T +S++D+ P L ++
Sbjct: 127 TADVSYRIDRPHDPAEDVTIAFDDPELAIPWPLPVTS---MSQRDREAPSLAEV 177
>gi|169630860|ref|YP_001704509.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium abscessus
ATCC 19977]
gi|169242827|emb|CAM63855.1| DTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium abscessus]
Length = 205
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ + + DSRG F + + L E +Q + G++RG+HF
Sbjct: 6 LSVPGSFEITPVQHHDSRGVFLELFKGPALAEAIGHPFELQQANCSVSAAGSLRGIHFAD 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V C+ G ++D+ VDIR SPT+G W ++ + + +Y+P G HGF+ LE
Sbjct: 66 VPPGQAKYVTCLTGSVYDVVVDIRVGSPTFGAWDAVLLDPRDRRAVYVPEGVGHGFLALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSV----SEKDQNLPFLNQI 175
++ V+Y + Y+ + G+ D ++ I WP + SEKD P L
Sbjct: 126 DDSTVVYLCSAGYAPGREHGIDPLDPTVGIQWPTRRPDGTELSLLVSEKDGAAPSLLDA 184
>gi|256790051|ref|ZP_05528482.1| epimerase [Streptomyces lividans TK24]
gi|289773932|ref|ZP_06533310.1| epimerase [Streptomyces lividans TK24]
gi|289704131|gb|EFD71560.1| epimerase [Streptomyces lividans TK24]
Length = 183
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ + + D+RG+F +T+ + +++ +GL FVQD+ S S G +RGLH +
Sbjct: 8 EISGAYLFRPTPHADARGFFCRTFDADVVRSVGLDPAAFVQDSVSRSVR-GVLRGLHLR- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVRC GRIFD VD+R +SPTY E+S +YIP G AHGF +L
Sbjct: 66 SGAGEAKLVRCSNGRIFDAVVDLRADSPTYLGRAFFELSGETQTTLYIPAGCAHGFQSLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++V Y++ + D +A+ D + I WPL + SVS +D+ P L
Sbjct: 126 ETSDVSYRIDRAHDPAEDVTIAFDDPDLGIDWPLP---VASVSPRDREAPSLADF 177
>gi|209551787|ref|YP_002283704.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537543|gb|ACI57478.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 180
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ +++ D RG F++T+ ++ + GL V+ Q N S + GT+RG+H+Q P
Sbjct: 9 SGAFVVEVDARSDDRGMFARTFDAQTFADRGLVPVYPQCNVSQNHRRGTLRGMHYQAKPR 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
+ KLVR GR+FD+A+D+R +SP+Y W S+E+ A + YIP G AHGF+TLE +
Sbjct: 69 PEIKLVRATRGRVFDVALDLRPDSPSYLQWASVELDAASCNAFYIPAGCAHGFLTLEDDC 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E+ Y++++ Y E GV W D + I WP + +SE+D L +Q
Sbjct: 129 ELFYQMSETYVPELARGVRWDDPAFSIAWPFAPS---VISERDAVLESYSQ 176
>gi|302387804|ref|YP_003823626.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Clostridium
saccharolyticum WM1]
gi|302198432|gb|ADL06003.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Clostridium
saccharolyticum WM1]
Length = 187
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + I++ ++D RG +T+ + E GL+ F + + + IRG H+QRPP
Sbjct: 10 ISGLFIVRPHYYQDDRGSNMKTFHKETFLEKGLKCDFGETMITTNLHKNVIRGFHYQRPP 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y Q KL C+ G + +VD+R+ SPTYG + + ++ +YIP G A+ + N
Sbjct: 70 YTQCKLYYCLCGEWNNYSVDLRKGSPTYGKVICISMNEEERKLLYIPEGIANAHLIKRDN 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
T+V+Y++ Y +HD GV W S+ I + + + P +++KD LP + +SPF Y
Sbjct: 130 TKVLYQLGSKYMPDHDEGVRWN--SLGINFSVTN---PIITDKDAGLPSFEEFESPFIY 183
>gi|120598297|ref|YP_962871.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. W3-18-1]
gi|120558390|gb|ABM24317.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Shewanella sp. W3-18-1]
Length = 178
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-----DVFVQDNHSFSFDCGTIRGL 56
+ V + + ++F D RG+F +T+ + +FVQ+NHS S +RGL
Sbjct: 7 ELAEVLVFEPQRFGDERGFFMETFRQSYFDACFTERGFSLPIFVQENHSRSQQ-NVLRGL 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQ Q KLVR G IFD+AVDIR NSPTYG WV +SA+N LQ++ P GFAHGF
Sbjct: 66 HFQ-RLQPQGKLVRVCTGSIFDVAVDIRANSPTYGQWVGRVLSADNRLQMWTPPGFAHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +VIY+ TD+Y+ + + W + I WPL P +S++D
Sbjct: 125 YVLSEFADVIYRCTDYYAPHDEYVLGWNNTDFSIDWPL--IAEPLLSDRDAIA 175
>gi|311694791|gb|ADP97664.1| dTDP-4-dehydrorhamnose 3,5-epimerase [marine bacterium HP15]
Length = 174
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ ++ ++ D RG+F + + + ++E+GL Q N S GT+RGLH+Q
Sbjct: 7 EISGSYLIDVKRIGDDRGFFGRLWCEREMEEMGLVSAIKQSNIGVSPLKGTLRGLHYQTA 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ + K++RC G I+D+ VD+R +SPT+ W ++E++A N +Y+P G A G+ TL
Sbjct: 67 PHQEVKIIRCPRGAIYDVIVDLRPDSPTFKKWFAVELTAENSRMLYVPEGCATGYQTLVD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+TE+ Y ++FY E +GV D + I WPL + ++S+ D+N
Sbjct: 127 DTEIYYHTSEFYHPESATGVRHDDPTFGIEWPLP---IAAISDNDKNWNNF 174
>gi|40644856|emb|CAE17549.1| NDP-5-epimerase [Streptomyces griseus subsp. griseus]
Length = 209
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 2/175 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ + R D RG F + YS L + V G +RG+HF
Sbjct: 4 LAVDGAWEIDLRPHHDERGTFVEWYSDDELAAALGAPMPVALGAVSISRKGVVRGVHFVE 63
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QA+ V C+AG + D VD+R SPT+G W S+ + + +++ G H F L
Sbjct: 64 TPPGQARYVTCVAGEVRDFVVDVREGSPTFGRWDSVRLGPDQWRAVHLAEGLGHAFTALT 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V+Y + Y + + D + + WP S+S +D+ P L +
Sbjct: 124 DRATVLYLCSAPYRPGRERTIHPLDPELALPWP--AGAERSLSIRDREAPTLAEA 176
>gi|256829649|ref|YP_003158377.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfomicrobium baculatum
DSM 4028]
gi|256578825|gb|ACU89961.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfomicrobium baculatum
DSM 4028]
Length = 175
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D+RG+F +T+ + G+ VQ + S + T+RG+H+Q P
Sbjct: 8 IGGLHQIEGEAHRDARGFFLRTWCREAFLAAGIDFFPVQTSLSANIRRHTLRGMHYQVSP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ KLVRC+ GRI D+ VD+R SPT ++ + ++ G ++IP G AHGFMTL
Sbjct: 68 ARERKLVRCLHGRILDVVVDLRDGSPTRLRHWAVNLCSDAGNALFIPEGCAHGFMTLTDG 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
V Y + ++ EH G+ W D ++ ++WP +S +D++ P
Sbjct: 128 ALVEYMMDAPHAPEHARGLRWDDPALGLSWP---ARPVVISLRDRSWP 172
>gi|188580041|ref|YP_001923486.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium populi
BJ001]
gi|179343539|gb|ACB78951.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium populi
BJ001]
Length = 177
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + + D RG+F++T+ + GL F Q + SF+ GT+RG+HF R
Sbjct: 6 LALPGLFRVAPEPHADERGFFARTHCEETFTARGLVGRFAQSSVSFNHRRGTVRGMHFSR 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+A+ KLVRC AG I D +D+R +SPTY ++ +SA N +YIP G AHGF TL
Sbjct: 66 APHAETKLVRCTAGAIHDAVIDLRPDSPTYRRTAAVRLSAANRHALYIPAGLAHGFQTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
+ E++Y + + GV W D + +TWP + +S++D+ P
Sbjct: 126 DDAEILYMIDLPFVASAADGVRWDDPAFALTWP---EPVSVISDRDRAFP 172
>gi|265999143|ref|ZP_05465155.2| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 2 str.
63/9]
gi|263092407|gb|EEZ16660.1| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 2 str.
63/9]
Length = 184
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 3/158 (1%)
Query: 15 EDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAG 74
+D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q P+++ KLV C+ G
Sbjct: 30 KDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQNEPHSETKLVTCLQG 89
Query: 75 RIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134
++D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL + + Y ++ Y+
Sbjct: 90 IVWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLTDDVLIRYMISKPYA 149
Query: 135 VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 150 PDHAAGIRYDDPALDIPWPEKPS---VISQKDLGWPFL 184
>gi|117927776|ref|YP_872327.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidothermus cellulolyticus
11B]
gi|117648239|gb|ABK52341.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidothermus cellulolyticus
11B]
Length = 216
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + R++ D RG F + + + +L +G Q Q N S S GTIRG+HF
Sbjct: 21 LAVPDAWVFTPRQYPDERGVFLEWFRADVLSRVIGHQMAIAQSNQSVS-RRGTIRGVHFA 79
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V C G + D+ VDIR SPT+G ++ + + +YI G H FM L
Sbjct: 80 DVPPSQAKYVYCARGAVLDVVVDIRVGSPTFGRLDTVRLDDVDRRAVYISEGLGHAFMAL 139
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
+ V Y + Y+ E + GV D+ + I WP I P +S KD
Sbjct: 140 TDDAVVTYLCSTGYAPEREHGVNPLDEELGIPWP--RDIEPILSAKD 184
>gi|302555841|ref|ZP_07308183.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
viridochromogenes DSM 40736]
gi|302473459|gb|EFL36552.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
viridochromogenes DSM 40736]
Length = 183
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + + + D RG+F +T+ + +++ +GL D FVQD+ S S G +RGLH +
Sbjct: 9 IAGAYLFEPTPYADERGFFCRTFDADVVRSVGLAPDAFVQDSVSRSVR-GVLRGLHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC G+IFD+ VD+R +SPTY S E+S +YIP G AHGF L
Sbjct: 67 GKGEAKLVRCSYGQIFDVVVDLRPDSPTYRNVASFELSGETQTTLYIPAGCAHGFQALTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S +D+ P L ++
Sbjct: 127 TADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPATS---MSRRDREAPSLAEV 177
>gi|120402375|ref|YP_952204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium vanbaalenii
PYR-1]
gi|119955193|gb|ABM12198.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium vanbaalenii
PYR-1]
Length = 207
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + D+RG F + ++ + G + Q N S S G +RG+HF
Sbjct: 6 LTIPGAWEITPVVHTDARGAFFEWFTDAGFTAITGHRLDLRQANCSVS-RAGVLRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C+ G + D+ VDIR SPT+G W ++ + +Y+ G H F+ L
Sbjct: 65 QLPPSQAKYVSCVRGAVVDVVVDIRVGSPTFGRWDAVVLDDETHRSVYLSEGLGHAFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
++ V Y + Y + + D +++I W +S++D+ P L Q
Sbjct: 125 HDDSVVTYLCSAGYDPAREHTIDPLDPALEIDWNAWPSRAADGELILSDRDRAAPSLEQA 184
>gi|307730225|ref|YP_003907449.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1003]
gi|307584760|gb|ADN58158.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1003]
Length = 183
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S+ ++ FVQD H G +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFGDESGFCYESFSADEFVDDVARGFNFVQDRHLR-AVHGVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L++ + G IFD+AVD+R NSP +G W +SA N Q+++P GFAHGF+ L
Sbjct: 68 QRPQGRLMQVVVGEIFDVAVDVRLNSPNFGKWCGAYLSAENHRQVWVPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W D I I WP+ P V KD L + ++
Sbjct: 128 VAECLWKATEYWFPELERCILWSDPDIGIEWPI--DFEPIVGPKDAAGRRLYEAEN 181
>gi|21218943|ref|NP_624722.1| epimerase [Streptomyces coelicolor A3(2)]
gi|6066681|emb|CAB58341.1| putative epimerase [Streptomyces coelicolor A3(2)]
Length = 183
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ + + D+RG+F +T+ + +++ +GL FVQD+ S S G +RGLH +
Sbjct: 8 EISGAYLFRPTPHADARGFFCRTFDADVVRSVGLDPAAFVQDSVSRSVR-GVLRGLHLR- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVRC GRIFD VD+R +SPTY E+S +YIP G AHGF +L
Sbjct: 66 SGAGEAKLVRCSNGRIFDAVVDLRADSPTYLGRAFFELSGETQTTLYIPAGCAHGFQSLT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++V Y++ + D +A+ D + I WPL + SVS +D+ P L
Sbjct: 126 ETSDVSYRIDRAHDPAEDVTIAFDDPDLAIDWPLP---VASVSPRDREAPSLADF 177
>gi|4210934|gb|AAD12169.1| epimerase [Streptomyces fradiae]
Length = 205
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I +++ D RG F + S + L G Q N + S G G+HF
Sbjct: 8 LGIEGAWVIQPEIHPDRRGEFHAWFQSSEFRRLTGHSFSVPQVNIAVSRK-GAAAGIHFS 66
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK C+ G ++ VDIR SPTYG W ++ + N +Y+P G F+ L
Sbjct: 67 EVPPGQAKYSACVQGAGVEVVVDIRLGSPTYGQWRAVPVDEYNRTAVYVPAGLGRAFVAL 126
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T ++Y + Y+ + V D + I WP + + +SE+D P L +
Sbjct: 127 TDRTTLVYLCSSEYAARREHAVNPLDPDLAIAWP--EDVELLLSERDTRAPTLAEA 180
>gi|170722880|ref|YP_001750568.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida W619]
gi|169760883|gb|ACA74199.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas putida W619]
Length = 186
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + ++ ++ D+RG F++ + L LG Q NHS + G++RGLH+Q
Sbjct: 9 LPLGGLFSVQHKRHGDARGQFARLFCESSLGALGAPFHVRQINHSHTQGSGSVRGLHYQT 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKL+ C+ G ++D+AVD+R SPT+ W + + A +G + IP GFAHGF L
Sbjct: 69 GDTPEAKLITCLRGEVWDVAVDLREGSPTFLHWHAEHLRAGDGRSLLIPAGFAHGFQVLS 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ E++Y + Y+ + G++ D + I WPL +S +D P L+
Sbjct: 129 EDAELLYLHSADYAPGREGGLSVLDPKLAIRWPLAVKN---LSARDAAHPLLD 178
>gi|289672184|ref|ZP_06493074.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
syringae FF5]
Length = 149
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 66/145 (45%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F +++++K + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNAKAFQAATGLTREFVQDNHSRS-QRGVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
AQ KLVR G++ D+AVDIRR+SP +G WV +E+SA N Q+++P GFAHGF+ L
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGFVVLS 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQD 145
+ E +YK TD+Y+ + +AW D
Sbjct: 125 EHAEFLYKTTDYYTPSAERCIAWDD 149
>gi|17989175|ref|NP_541808.1| dTDP-4-dehydrorhamnose 3,5-epimerase / dTDP-4-dehydrorhamnose
reductase [Brucella melitensis bv. 1 str. 16M]
gi|260564541|ref|ZP_05835026.1| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 1 str.
16M]
gi|265989756|ref|ZP_06102313.1| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993136|ref|ZP_06105693.1| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 3 str.
Ether]
gi|16740537|gb|AAL27671.1| Bme22 [Brucella melitensis]
gi|17985028|gb|AAL54072.1| dtdp-4-dehydrorhamnose 3,5-epimerase / dtdp-4-dehydrorhamnose
reductase [Brucella melitensis bv. 1 str. 16M]
gi|260152184|gb|EEW87277.1| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 1 str.
16M]
gi|262764006|gb|EEZ10038.1| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 3 str.
Ether]
gi|263000425|gb|EEZ13115.1| dTDP-4-dehydrorhamnose reductase [Brucella melitensis bv. 1 str.
Rev.1]
Length = 184
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 3/158 (1%)
Query: 15 EDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAG 74
+D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q P+++ KLV C+ G
Sbjct: 30 KDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQNEPHSETKLVTCLQG 89
Query: 75 RIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134
++D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL + + Y ++ Y+
Sbjct: 90 IVWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLTDDVLIRYMISKPYA 149
Query: 135 VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 150 PDHAAGIRYDDPALDIPWPEKPS---VISQKDLGWPFL 184
>gi|256380270|ref|YP_003103930.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinosynnema mirum DSM
43827]
gi|255924573|gb|ACU40084.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinosynnema mirum DSM
43827]
Length = 198
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I F D RG+F + + G + Q NHS S G IRGLH+
Sbjct: 6 LRIPGAFEFTPSVFPDDRGFFVAPFQESAFERATGHRLRVAQVNHSQS-RRGVIRGLHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C GR+ D+ VD+R SPT+G W ++E+SA +Y+P GF H M L
Sbjct: 65 DVPPGQAKFVHCPRGRLLDVVVDVRVGSPTFGQWDAVELSAEKFNGVYLPEGFGHALMAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T Y ++ ++ + + GV D + + P + P +SEKD P L Q
Sbjct: 125 EDDTVTAYLCSEGFNPKAERGV---DP-LSLDLPWPAGVEPVLSEKDAQAPSLAQA 176
>gi|325002444|ref|ZP_08123556.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudonocardia sp. P1]
Length = 208
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I+ + F D RG F+ + +E G Q N S S G IRG+HF
Sbjct: 13 LGIDGAWTFEPATFPDHRGSFTAPFQGPAFREALGFDLTVAQTNRSVS-HRGVIRGVHFA 71
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK + AG + D+ VD+R SPT+G + +E+ A +Y+ G H F L
Sbjct: 72 DVPPGQAKYLHVAAGAVRDVIVDLRVGSPTFGRYEVVELDAAVPRAVYLAEGLGHAFQAL 131
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
T V Y + Y+ + + G++ D + + W D + P +S+KD++ P L
Sbjct: 132 ADGTVVEYLCSTPYAPDREHGISPLDPELALPW--ADGLEPVLSDKDRDAPTLA 183
>gi|146341725|ref|YP_001206773.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Bradyrhizobium sp.
ORS278]
gi|146194531|emb|CAL78556.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase
(dTDP-4-keto-6-deoxyglucose 3,5-epimerase)
(dTDP-L-rhamnose synthetase), (rfbC-like)
[Bradyrhizobium sp. ORS278]
Length = 180
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 65/171 (38%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ R+++ D RG F++T+ +K + VQ N S + GT+RG+HFQR P
Sbjct: 9 SDARLIELTVRGDERGSFTRTWCAKTFAAEEIDFQPVQGNSSVTRHRGTVRGMHFQRAPK 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
A AK+VRC AG I D+ VD+R S T G + E+ + G +YIP GFAHGF TL +
Sbjct: 69 ADAKIVRCTAGLIHDVIVDVRPTSATRGEVYACELGPSTGRMLYIPAGFAHGFQTLTDDV 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V Y + Y E G D I I WP T +S KD P L +
Sbjct: 129 TVEYLMGIDYVEELSDGFRHNDPLISIKWPGPVT---VLSAKDAAWPLLAE 176
>gi|146304599|ref|YP_001191915.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Metallosphaera sedula DSM
5348]
gi|145702849|gb|ABP95991.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Metallosphaera sedula DSM
5348]
Length = 176
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 99/174 (56%), Gaps = 15/174 (8%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V +++T ++ D RG+F + + FVQ NHSFS G +RGLHFQ P Q
Sbjct: 11 VTLIETTQYPDDRGFFQELFRESQF-----PCRFVQVNHSFSRR-GVLRGLHFQAMPVPQ 64
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
KLV I GRI+D+AVD+RR + + G ++IP GFAHGF LE + V
Sbjct: 65 GKLVTVITGRIYDVAVDLRRGFKGWAG-----VELTPGKLLWIPPGFAHGFQALED-SHV 118
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
IY VT +S +HD+GVAW D I + WPL + P +SEKD+ LP L + + F
Sbjct: 119 IYFVTREFSPQHDAGVAWDDPEIGVRWPLPN---PILSEKDRKLPRLAESRANF 169
>gi|296137807|ref|YP_003645050.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tsukamurella paurometabola
DSM 20162]
gi|296025941|gb|ADG76711.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tsukamurella paurometabola
DSM 20162]
Length = 191
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + ++F D RG F + + + +E G +Q + G +RG+H+
Sbjct: 8 LTVPGAFEFTPQQFGDDRGRFLEWFKASEFEEATGAPMPELQQANCSVSAAGVLRGVHYT 67
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G D+ VD+RR+SPT+G W ++ + + +Y+P G H ++L
Sbjct: 68 LTPPGQAKYVTCVRGAFLDVVVDLRRDSPTFGTWDTVLLDDVDRRAVYLPAGLGHAILSL 127
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E + V+Y + Y+ + D + D + I WP + S KD+ P L ++
Sbjct: 128 EDRSTVMYLCSVEYAPDVDRELDAFDPDLAIDWPTEGRDGTPLTYVRSAKDEAAPSLREV 187
>gi|117621524|ref|YP_858587.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562931|gb|ABK39879.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 187
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ R+L+ DSRG S+ + ++ L LG + Q N +++ CGTIRGLH+Q PP
Sbjct: 11 LPGARLLQREVCGDSRGTLSRLFCAEELAMLGWKSCIAQVNLTYTSRCGTIRGLHYQHPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
YA+ KLV CI GRI+D+ VDIR +SPT+ W + E+S +N + IP GFAHGF TL
Sbjct: 71 YAEKKLVTCIQGRIWDVIVDIRADSPTFLQWYAEELSDDNHRSLLIPEGFAHGFQTLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
E++Y + + + G+ D + I+WPL + +S +D P LN
Sbjct: 131 VEILYCHSAVHVPAAEGGLCPLDPRLQISWPLP---ITEISARDHQHPVLND 179
>gi|91782843|ref|YP_558049.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
gi|91686797|gb|ABE29997.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
Length = 183
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S ++ FVQD HS S G +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFCDEFGFCFESFSEDEFIADVSQAFQFVQDRHS-SAVRGVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L+R + G +F +AVD+R NSP +G W ++SA N QI++P GFAHGF+ L
Sbjct: 68 QRPQGRLMRVVVGEVFGVAVDVRLNSPNFGKWCGADLSAANHRQIWVPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W D I I WP+ P + KD L + ++
Sbjct: 128 VAECLWKTTEYWFPELERCILWSDPDIGIEWPI--DFEPILGAKDAAGRRLYEAEN 181
>gi|225686245|ref|YP_002734217.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella melitensis ATCC
23457]
gi|256043333|ref|ZP_05446268.1| dTDP-4-dehydrorhamnose 3,5-epimerase / dTDP-4-dehydrorhamnose
reductase [Brucella melitensis bv. 1 str. Rev.1]
gi|256111660|ref|ZP_05452650.1| dTDP-4-dehydrorhamnose 3,5-epimerase / dTDP-4-dehydrorhamnose
reductase [Brucella melitensis bv. 3 str. Ether]
gi|225642350|gb|ACO02263.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella melitensis ATCC
23457]
gi|326410597|gb|ADZ67661.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella melitensis M28]
gi|326553889|gb|ADZ88528.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella melitensis M5-90]
Length = 163
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 3/158 (1%)
Query: 15 EDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAG 74
+D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q P+++ KLV C+ G
Sbjct: 9 KDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQNEPHSETKLVTCLQG 68
Query: 75 RIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134
++D+ VD+R +SPTY W +E+SA NG+Q+YIP G AHGF TL + + Y ++ Y+
Sbjct: 69 IVWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHGFQTLTDDVLIRYMISKPYA 128
Query: 135 VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+H +G+ + D ++DI WP + +S+KD PFL
Sbjct: 129 PDHAAGIRYDDPALDIPWPEKPS---VISQKDLGWPFL 163
>gi|158425101|ref|YP_001526393.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azorhizobium caulinodans ORS
571]
gi|158331990|dbj|BAF89475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azorhizobium caulinodans ORS
571]
Length = 176
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V ++ D RG F++T+ ++ GL D + N S++ GT+RGLH Q
Sbjct: 7 KIPGVMEVEITPLTDERGLFARTFCAETFAGHGLADRYPHQNTSYNPRRGTLRGLHLQAE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P +AKLVR GR+FD+AVD+R +SP Y W ++E+ A+ +YIP G AHGF+TL+
Sbjct: 67 PSPEAKLVRATRGRVFDVAVDLRPSSPAYRAWTAVELDADRRNALYIPAGCAHGFLTLDD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
++EV Y +++ Y W D + + WP + +S +D +
Sbjct: 127 DSEVFYLMSETYVPALARTYRWNDPAFGVDWPFEPS---VISARDADA 171
>gi|293604975|ref|ZP_06687372.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Achromobacter piechaudii ATCC
43553]
gi|292816803|gb|EFF75887.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Achromobacter piechaudii ATCC
43553]
Length = 185
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/171 (38%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++I++ D RG+ ++ + L+ G Q NH+++ GTIRG+H+Q PP
Sbjct: 10 LAGLKIVERHPRGDDRGFLARLFDGADLRACGWDAAIEQVNHTYTAQAGTIRGMHYQLPP 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+A+ KLV CI G ++D+AVDIR+ SPT+ W + +SA+NG + IP GFAHGF TL +
Sbjct: 70 HAEIKLVSCIRGAVWDVAVDIRQGSPTFLQWHAERLSADNGRALLIPRGFAHGFQTLTDD 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E++Y + Y+ + ++ + +QD + I WPL L VS +DQ P L+
Sbjct: 130 VEMLYCHSAPYAPQAEAALHFQDARLGIAWPLP---LTQVSPRDQQHPRLD 177
>gi|28394167|dbj|BAC57040.1| dTDP-4-keto, 6-deoxyglucose-3-epimerase [Micromonospora
griseorubida]
Length = 233
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I+ + R+ D RG F + Y LL +G F Q N S S G IRG+HF
Sbjct: 6 LSIDGAWEVTPRQHGDPRGVFLEWYRFDLLAHGVGHPLRFGQANLSVSAR-GVIRGIHFT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + D+ VD+R SPT+G W ++ + +Y+ G HGF L
Sbjct: 65 DVPPGQAKYVTCVRGAVLDVVVDVRVGSPTFGRWEAVRLDDTERRAVYLAEGLGHGFCAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+ V Y + + + + + D + I WP +S +D+N P L Q+ +
Sbjct: 125 TDDATVTYLCSTTHDPQAERQLHPLDPMLGIEWP---DGPRLLSARDENAPDLGQLRN 179
>gi|170694621|ref|ZP_02885773.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia graminis C4D1M]
gi|170140503|gb|EDT08679.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia graminis C4D1M]
Length = 183
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S+ ++ FVQD H G +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFGDESGFCYESFSADEFMDDVARGFEFVQDRHLR-AVHGVLRGLHYQVQ 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L++ + G IFD+ VD+R SP +G W +SA N Q+++P GFAHGF+ L
Sbjct: 69 R-PQGRLMQVVVGEIFDVVVDVRLKSPNFGKWCGAYLSAENHRQVWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W D I I WP+ P V KD L + ++
Sbjct: 128 VAECLWKATEYWFPELERCILWSDPDIGIEWPI--GFEPIVGAKDAGGRRLYEAEN 181
>gi|312622139|ref|YP_004023752.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202606|gb|ADQ45933.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 186
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 71/182 (39%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I ED RG F + Y+S + L + + S IRGLHFQ PP
Sbjct: 10 IPGCFEFIPDIKEDRRGAFVKVYNSDFYSSILLNTSIKESYFTISHK-NVIRGLHFQLPP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y AK+V C+ G I D+ VD+R+ SPTYG + ++A +YIP G AHG+ L
Sbjct: 69 YEVAKIVYCVEGEIMDVVVDLRKGSPTYGKYDIFYLNAQKSNILYIPEGLAHGYCVLSEK 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
VIY VT+ YS EHD+G+ W S I WP+ + P +SE+D+NLP +PF+Y
Sbjct: 129 AIVIYNVTNVYSKEHDTGIRWD--SAGIPWPVDN---PILSERDKNLPEFKYFRTPFKYK 183
Query: 183 GL 184
L
Sbjct: 184 DL 185
>gi|115526250|ref|YP_783161.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisA53]
gi|115520197|gb|ABJ08181.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodopseudomonas palustris
BisA53]
Length = 177
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 100/173 (57%), Gaps = 2/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++++ ++ + DSRG F++ + L GL VQ + SF+ CGT+RGLH+Q
Sbjct: 6 LDLDGAVLIDVDRIVDSRGHFARVFCIDELTAAGLDAGIVQASVSFNNKCGTLRGLHWQA 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
A+AK VRC G IFD VD+R SPTY WVS+E+S +N +YIP GFAHGF TL
Sbjct: 66 GAQAEAKYVRCTRGAIFDAIVDLRPQSPTYLRWVSIELSQDNQRTLYIPKGFAHGFQTLC 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+TE+ Y++T+ ++ E G + D + I WP T +S+KD P
Sbjct: 126 DDTEIFYQMTERFAPEAACGARFDDAAFGIVWP--KTEQRIISDKDLGYPGFA 176
>gi|33862386|ref|NP_893946.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
MIT 9313]
gi|33640499|emb|CAE20288.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prochlorococcus marinus str.
MIT 9313]
Length = 205
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 67/177 (37%), Positives = 104/177 (58%), Gaps = 15/177 (8%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ----------DVFVQDNHSFSFDC 50
M++ +L F D RG+F ++++ + ++ ++ VF QDNHS S
Sbjct: 14 MDLP--LLLTPSVFNDDRGFFFESWNERSFQQALIEGGWNEQAASAVVFRQDNHSRSSL- 70
Query: 51 GTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPT 110
G +RGLH+Q P Q KLVRC G IFD++VD+RR S T+G V++E++A N Q+++P
Sbjct: 71 GVLRGLHYQLQPEPQGKLVRCTVGAIFDVSVDLRRGSSTFGQCVAVELTAENHKQLWVPV 130
Query: 111 GFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL--DTILPSVSEK 165
GFAHGF+TL EV+YK + F++ + + + W D + I WPL P ++EK
Sbjct: 131 GFAHGFLTLSDQAEVLYKASGFWNRDCERSLRWDDPELAIAWPLERLGGAQPLLAEK 187
>gi|328886046|emb|CCA59285.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces venezuelae ATCC
10712]
Length = 202
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I F+DSRG F+ Y + +LG V+ GT+RG+HF
Sbjct: 10 LAIEGAFAFTPPVFKDSRGLFASPYQGDVFAGQLGRPLFQVEQVSHNLSARGTLRGVHFT 69
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P AK V C GR+ D +D+R SPT+G WV E+ A +Y+P G H F++L
Sbjct: 70 ATPPGMAKYVYCPYGRLRDFLIDLRVGSPTFGQWVMNELDAETSRALYVPVGVGHAFVSL 129
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ ++ +Y ++ Y ++ + D ++ + P D + +S++D+ P L +
Sbjct: 130 QDDSMCVYVMSQGYVPANELALNPLDPALGLDLP--DDVELILSDRDKIAPTLAEA 183
>gi|118595001|ref|ZP_01552348.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [Methylophilales
bacterium HTCC2181]
gi|118440779|gb|EAV47406.1| CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase [Methylophilales
bacterium HTCC2181]
Length = 187
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 66/178 (37%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ ++I++ R DSRG+ S+ Y +K G Q N + ++ GT+RGLH+Q P
Sbjct: 12 LEGLKIVQRRTVNDSRGFLSRVYCAKEFAGHGFNKSVSQINQTLTYQKGTVRGLHYQLMP 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + KLV C+ G IFD+AVD+R+ SPT+ W S +S N + IP GFAHGF +L N
Sbjct: 72 HTEIKLVSCVKGEIFDVAVDLRKGSPTFLHWHSEMLSEKNQRSMLIPEGFAHGFQSLTDN 131
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
E++Y + Y ++ + D + IT+PL T +SE+D+ P ID+ FE
Sbjct: 132 CELLYLHSKPYEKGSEAALNMNDSRLAITFPLSITD---ISERDRAHPM---IDNNFE 183
>gi|197103963|ref|YP_002129340.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phenylobacterium zucineum
HLK1]
gi|196477383|gb|ACG76911.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Phenylobacterium zucineum
HLK1]
Length = 176
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V ++ D RG F++ + + G+ V Q + S + GT+RGLH+Q P
Sbjct: 8 IPGVVRVEAEPRADERGGFARLHCPEEFAAAGVPFVPAQTSLSRNPHAGTLRGLHYQPAP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + KLVR + GR+FD+AVD+R +SPT+ W ++E+ A + IP G AHGF+TLE +
Sbjct: 68 HGEVKLVRVVRGRVFDVAVDLRADSPTHRRWTAVELCAETMTALLIPEGVAHGFLTLEPD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
T+V+Y++ Y ++GV W D + I WP + +S++D+ P
Sbjct: 128 TDVLYQIAPAYRPGREAGVRWDDPAFGIDWP---AVPALISDRDRTYP 172
>gi|10179846|gb|AAG13911.1|AF263245_7 TDP-4-keto-6-deoxyhexose 3,5-epimerase [Micromonospora megalomicea
subsp. nigra]
Length = 201
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I V + F D RG F Y + LG V + G +RG+HF
Sbjct: 6 LGIEGVFTFTPQTFADERGVFGTAYQEDVFVAALGRPLFPVAQVSTTRSRRGVVRGVHFT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P + AK V C GR D AVDIR SPT+G +E+SA + + +Y+P G H F++L
Sbjct: 66 TMPGSMAKYVYCARGRAMDFAVDIRPGSPTFGRAEPVELSAESMVGLYLPVGMGHLFVSL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T ++Y ++ Y + + V D + + P+ + +SE+D+ P L +
Sbjct: 126 EDDTTLVYLMSAGYVPDKERAVHPLDPELAL--PIPADLDLVMSERDRVAPTLREA 179
>gi|307325622|ref|ZP_07604823.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces violaceusniger
Tu 4113]
gi|306888750|gb|EFN19735.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces violaceusniger
Tu 4113]
Length = 183
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + + D RG+F +T+ + +++ +GL FVQD+ S S G +RGLH +
Sbjct: 9 ITGAYLFEPTPYADERGFFCRTFDADVVRSVGLDPDAFVQDSLSRSVR-GVLRGLHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC GRIFD+ D+R +SPTY E+S +YIP G AHGF L
Sbjct: 67 GAGEAKLVRCSYGRIFDVVADLRTDSPTYLGRAFFELSGETQRTLYIPAGCAHGFQALTE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S++D+ P L ++
Sbjct: 127 TADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPITS---MSQRDREAPSLAEV 177
>gi|7800660|gb|AAF70101.1|AF257324_2 AknL [Streptomyces galilaeus]
Length = 201
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHF 58
+ ++ + FED RG F+ + +F Q NHS S GT+RG+H+
Sbjct: 6 LAVSGAFVFTPPVFEDDRGLFTSPFQEPAFVAALGHPLFPVAQSNHSRSRR-GTVRGIHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR DI VDIR SPTYG W S + +Y P G H F+
Sbjct: 65 TVTPPGVAKYVYCARGRAIDIVVDIRVGSPTYGRWDSSVLDPEGFRAMYFPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE +T + Y ++ Y +H+ ++ D ++ + P+ + P +S +D P L Q+
Sbjct: 125 LEDDTVMSYMLSGSYEAQHEMSLSPLDPALGL--PIPQDVAPLLSARDTAAPLLEQV 179
>gi|296159373|ref|ZP_06842198.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. Ch1-1]
gi|295890357|gb|EFG70150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. Ch1-1]
Length = 183
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S +L FVQD HS S G +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFCDEFGFCFESFSEDEFIADLSPAFQFVQDRHS-SAVHGVLRGLHYQVQ 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L+R + G +F +AVD+R NSP +G W ++SA N QI++P GFAHGF+ L
Sbjct: 69 R-PQGRLMRVVVGEVFGVAVDVRLNSPNFGKWCGADLSAANHRQIWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W+D I I WP+ P + KD L + ++
Sbjct: 128 VAECLWKTTEYWFPELERCILWRDPDIGIEWPI--DFEPILGTKDAAGRRLYEAEN 181
>gi|70607435|ref|YP_256305.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus acidocaldarius DSM
639]
gi|68568083|gb|AAY81012.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus acidocaldarius DSM
639]
Length = 184
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 11/181 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V +++T K+ED RG + + D VQ N+S+S G IRGLH+Q
Sbjct: 8 DIPDVLVIETDKYEDERGLLMELFKRSNF---IFIDSIVQVNYSYSKK-GVIRGLHYQLK 63
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLV I G+I+D+AVDIRR SP YG +VS + ++IP GFAHGF L
Sbjct: 64 PKEQGKLVTVIDGKIYDVAVDIRRGSPWYGKFVSEILVPGKM--LWIPPGFAHGFQAL-E 120
Query: 122 NTEVIYKVT-DFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
N+ V+Y ++ + +S ++G+ + D I + WP+ + P VS+KD P L + + FE
Sbjct: 121 NSHVVYFISGNDFSPPSEAGIRYDDPDIGVNWPIQN---PIVSQKDLRWPSLKECKNNFE 177
Query: 181 Y 181
Y
Sbjct: 178 Y 178
>gi|88319784|emb|CAF31362.1| putative NDP-hexose 3, 5-epimerase [Streptomyces sp. SCC 2136]
Length = 196
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++ R+ D RG F + L++ G+ Q N+S S T+RG+H
Sbjct: 3 IPGTYLVTPRQIHDERGNFYEAMRDDTLEKATGVAFQPRQINYSVSRRH-TLRGIHSVSI 61
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QAK V C+ G + DI VD+R SP + E+ A++G +Y+P G HGF+ L
Sbjct: 62 PPGQAKYVTCVRGVLRDIVVDLRIGSPAFMKHQVNELDADSGRSVYVPEGVGHGFLALTD 121
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + Y V+ Y + D +D+ W + +P +S+KD P + +
Sbjct: 122 DACICYVVSSTYVPGTQIDINPLDPELDLPWDCPE--VPLISDKDAKAPTVAEA 173
>gi|77918733|ref|YP_356548.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter carbinolicus DSM
2380]
gi|77544816|gb|ABA88378.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pelobacter carbinolicus DSM
2380]
Length = 181
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 62/177 (35%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + D RG F +T+ + GL + ++ S S G +RGLHFQ PP
Sbjct: 10 LKGCYEILPAVLGDERGSFIKTFHAPAFSRHGLCTDWREEYFSVSQQ-GVLRGLHFQTPP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ AKLV C+ G + D VD+RR SP YG ++E++ + +YIP G AHGF L
Sbjct: 69 HDHAKLVYCVGGAVLDAVVDLRRESPDYGQHATIELNPDKANMLYIPAGMAHGFYVLRGP 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
++YKV+ YS HD G+ W S I WP P +S +D +SPF
Sbjct: 129 ATMMYKVSTVYSPGHDRGILWN--SAGIPWP---DDNPLISPRDAAFEAFCDFESPF 180
>gi|11095239|gb|AAG29805.1| dTDP-4-keto-6-deoxyglucose 3,5-epimerase [Streptomyces
rishiriensis]
Length = 198
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + ++ D RG F Y E+G Q N S G +RG+HF
Sbjct: 6 LGIEGAWEITPKQHADPRGVFLDWYRVDQFAAEVGRPLRLAQANLSV-SVRGVVRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G +FD+ VD+R SPTYG W + + +Y+ G HGF +
Sbjct: 65 DVPPGQAKYVTCVRGALFDVVVDLRVGSPTYGRWEGTRLDDVSRRAVYLSEGIGHGFCAI 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y + Y+ + GV D + I WP+ P +S +DQ+ L +
Sbjct: 125 SDEATLCYLSSQTYNPASEHGVHPLDPELAINWPVE---TPLLSARDQDALLLAEA 177
>gi|213964897|ref|ZP_03393096.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium amycolatum
SK46]
gi|213952433|gb|EEB63816.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium amycolatum
SK46]
Length = 229
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHF--- 58
+I+ V + DSRG F + Y E F + + G +RGLHF
Sbjct: 11 SIDGVFTFEPVIHGDSRGSFHEWYRLDAFAEATGYPFFPEQANMSVSAAGVVRGLHFADV 70
Query: 59 ---QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHG 115
QAKLV C AG I DIAVD+RR S T+G E+ + +Y+P G HG
Sbjct: 71 STAPDGHPGQAKLVTCPAGHILDIAVDLRRGSDTFGKVEVFELDSKTRRVVYLPNGIGHG 130
Query: 116 FMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITW------PLLDTILPSVSEKDQNL 169
F++L ++ + Y + Y+ E + V+ QD ++ I L +SE+DQ
Sbjct: 131 FVSLADDSVLTYLTSTGYNPEAERAVSIQDSTLGIDLAALLAKGGLTEADMILSERDQKA 190
Query: 170 PFLNQIDS-----PFEYDGLPLLSLNMERD 194
P + Q ++ P E+D L NM RD
Sbjct: 191 PTIEQFEAEGNKLPSEFDCKDL--ENMARD 218
>gi|154253788|ref|YP_001414612.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parvibaculum lavamentivorans
DS-1]
gi|154157738|gb|ABS64955.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parvibaculum lavamentivorans
DS-1]
Length = 184
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 99/176 (56%), Gaps = 3/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ +++L R+ D RGW + + + L G Q N + + + GT+RG+HFQ PP
Sbjct: 12 LAGLKLLHRRRMGDDRGWLERLFCADELASAGWVWPIAQINRTLTVNKGTVRGMHFQHPP 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ +AKLV C+ G + D+AVD+R+NSPTY W +S N + IP GFAHGF TL +
Sbjct: 72 HEEAKLVTCLRGEVLDVAVDLRKNSPTYLGWHGEILSGKNAASLLIPPGFAHGFQTLTSD 131
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
E+ Y + Y+ + + GV D +I I WPL + SE+D+N + + ++
Sbjct: 132 VEMFYVHSAPYAPQAEDGVRADDPAIAIAWPLE---IAERSERDRNFSLVEEREAK 184
>gi|30795018|ref|NP_851468.1| putative NDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces
rochei]
gi|30698391|dbj|BAC76504.1| putative NDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces
rochei]
Length = 209
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + F DSRG F TY E V G +RG+HF
Sbjct: 17 LAVEGAYEFTPTVFPDSRGLFVTTYQQPQFTETTGHSFPVFQTCQSHSRRGVVRGVHFTS 76
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P AK V C GR D VD+R SPT+G W ++++ + Y+P G H F+ LE
Sbjct: 77 TPPGMAKHVYCGRGRALDFVVDLRVGSPTFGKWDTVQLGGESFRSTYLPVGVGHVFVALE 136
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN---QIDS 177
+T ++Y ++ Y E++ V+ D ++ + + D + P +SE+D P L +
Sbjct: 137 DDTTMVYLMSGPYVAENELAVSPLDPALGLPVRI-DDVEPVLSERDVAAPSLAGALEAGI 195
Query: 178 PFEYD 182
+Y+
Sbjct: 196 LPDYE 200
>gi|319440778|ref|ZP_07989934.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Corynebacterium variabile DSM
44702]
Length = 228
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ ++ + R F D RG F + + + + ++LG Q N S S G +RG+H+
Sbjct: 16 LPLSGTWVNTPRIFPDDRGTFLEWFRADAVAEKLGYPLDLPQANLSTS-VEGVVRGIHYA 74
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+AGRI D+ VD+RR S T+G + +E+SA N +Y+P G HGF+
Sbjct: 75 DVPPGQAKYVTCVAGRILDVIVDLRRGSTTFGRHIVVELSAENRRGLYLPVGMGHGFVVP 134
Query: 120 --EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD--TILPSVSEKDQNLPFLNQI 175
V Y V++ Y+ + + GV D + I W + +S+KD++ P ++
Sbjct: 135 EGSGPATVCYLVSESYNPDAEHGVNPLDPKLGIDWSVAGLADSDLVLSDKDRDAPGYREV 194
Query: 176 D 176
+
Sbjct: 195 E 195
>gi|290956845|ref|YP_003488027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces scabiei 87.22]
gi|260646371|emb|CBG69466.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces scabiei
87.22]
Length = 187
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
I+ + + + D RG+F +T+ + +++ +GL F+QD+ S S G +RGLH +
Sbjct: 8 EISGAYLFEPTPYADERGFFCRTFDADVVRSVGLDPHAFLQDSLSRSAG-GVVRGLHLR- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVRC GRIFD+ VD+R SPTY E+S +YIP G AHGF L
Sbjct: 66 SGAGEAKLVRCSYGRIFDVVVDLRPGSPTYLARAFFELSGETQTTLYIPAGCAHGFQALT 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + + WPL T VSE+D+ P L ++
Sbjct: 126 PTADTSYRIDRPHDPSEDVTIAFDDPELAVPWPLPVTS---VSERDRKAPGLAEV 177
>gi|85707416|ref|ZP_01038497.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseovarius sp. 217]
gi|85668072|gb|EAQ22952.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseovarius sp. 217]
Length = 155
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 82/155 (52%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
Query: 30 LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT 89
+ E GL FVQDNHS S GTIRGLHFQ PP+AQAKLVRC G ++D+AVDIRR SPT
Sbjct: 1 MAEAGLTIDFVQDNHSLSEKVGTIRGLHFQSPPHAQAKLVRCGRGALYDVAVDIRRGSPT 60
Query: 90 YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSID 149
YG WV +++S NG Q+ +P GF HGF+T E TE+IYK +D+Y+ E D V + D I
Sbjct: 61 YGHWVGVDLSFENGRQLLVPEGFLHGFVTREPMTEIIYKCSDYYAPECDGAVRFDDPEIG 120
Query: 150 ITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGL 184
ITW + + +S+KD P L SPFE+ G
Sbjct: 121 ITWGVEGESV-VLSDKDAKAPLLRDFVSPFEFVGA 154
>gi|50954292|ref|YP_061580.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50950774|gb|AAT88475.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 201
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + + D RG F + Y L+E G Q N S S RG+HF
Sbjct: 6 LTIPDAYEITPVQHADDRGLFFEFYRFDRLEEAVGHSLDLKQGNTSVSRRGSV-RGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V G + D +DIR SPT+G W S+ + + +Y+ G H F+ L
Sbjct: 65 DIPPSQAKYVMAPRGAVLDFVIDIRLGSPTFGQWDSVLLDDKDRRALYVAEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V Y VTD Y+ + G+ D I + +P+ + L +S KD + P L +
Sbjct: 125 TADATVSYLVTDVYTPTREHGINPLDSDIALAFPVPEDEL-LLSPKDTDAPGLAEA 179
>gi|254820400|ref|ZP_05225401.1| hypothetical protein MintA_10746 [Mycobacterium intracellulare ATCC
13950]
Length = 190
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+ D RG+ S+++S++ GL Q N F++ GT+RGL+ + P
Sbjct: 7 KVAGVTIIDFELNHDHRGFSSRSFSARDFANHGLDFEVAQTNIYFNYTRGTVRGLYRRVP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+A+AKLVRC G I +AVD+R +S T+G V +++SA++ +++P A+GF T
Sbjct: 67 PHAEAKLVRCTRGAIAAVAVDVRPDSLTHGDHVMVQLSADDQRTLFLPPYVAYGFQTQVD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
+TEV + V+ Y++ + G+ W D I+WP+ T +SE+D + P
Sbjct: 127 DTEVTFHVSGQYAMADEQGIRWDDPEFGISWPIPVT---VISEQDASWPS 173
>gi|2246638|gb|AAB63046.1| putative epimerase [Streptomyces peucetius]
Length = 208
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHF 58
+ + + F D RG F + +F Q NHS S G +RG+H+
Sbjct: 6 LAVQGAYTFEPEVFPDERGLFVSPFREDAFTAAVGHPLFPVRQTNHSRSRR-GVVRGVHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR DI VD+R SPTYG W ++E+ +Y P G H F+
Sbjct: 65 TVTPPGSAKYVYCARGRSLDIVVDVRVGSPTYGRWDAVELEPREFRAVYFPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE +T + Y ++ Y ++ V+ D ++ + P+ + P +S +D+ P L Q
Sbjct: 125 LEDDTVMSYMLSGEYVQANELAVSVLDPALGL--PVPGDLEPLLSGRDRAAPPLEQA 179
>gi|292669427|ref|ZP_06602853.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas noxia ATCC 43541]
gi|292648880|gb|EFF66852.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Selenomonas noxia ATCC 43541]
Length = 182
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 66/177 (37%), Positives = 97/177 (54%), Gaps = 6/177 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + +EDSRG F +T+ ++ ++LGL F ++ S S G +RGLHFQ PP
Sbjct: 11 LQGCVRILPVVWEDSRGVFIKTFHVEVFRQLGLPTSFAEEYFSVSRR-GVLRGLHFQTPP 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K+V C G + D VD+RR+SPTYG + + ++ G +YIP G AHGF T
Sbjct: 70 MDHEKIVCCAEGEVTDAVVDLRRSSPTYGKYALFHLKSSEGTMLYIPKGMAHGFYTRSST 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
++Y+VT Y+ D+G+ W + I W D P +SE+DQ+ P L SPF
Sbjct: 130 ALMLYQVTSVYAPACDAGIRWD--TAGIPW---DVEHPILSERDQSFPALADFVSPF 181
>gi|323474312|gb|ADX84918.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus REY15A]
Length = 178
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 97/172 (56%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V ++K + F D+RG+F + + K++ + +Q N SFS G +RGLH+Q PP
Sbjct: 11 GVLLIKPKVFPDNRGYFKEIFKESDFKKMNISSP-LQVNVSFS-KAGVVRGLHYQLPPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q K+V + GRI D+AVDIR+ S ++G +V E+S +N ++IP GFAHGF LE +T
Sbjct: 69 QGKIVTVLKGRIIDVAVDIRKKSKSFGKYVYAELSEDNHYMLWIPPGFAHGFQALEESTV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + + YS H+ + + I WP+ +SEKD P L + +
Sbjct: 129 LYFVTHNEYSPPHERCINYT----MIDWPIK---SVIISEKDAKCPPLEKAE 173
>gi|283458590|ref|YP_003363223.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rothia mucilaginosa DY-18]
gi|283134638|dbj|BAI65403.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rothia mucilaginosa DY-18]
Length = 474
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
I + I+ D+RGWF + + + + GL VQ+N SF+ GT RG+H +
Sbjct: 11 EIPGLLIIDLPVHGDNRGWFKENWQREKMLAAGLPDFNPVQNNISFNASVGTTRGIHAE- 69
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K V GRIF VD+R I++P G + F TLE
Sbjct: 70 ---PWDKYVSVATGRIFGAWVDLRAGESFGKVVTVELG---PDTAIFVPRGVGNSFQTLE 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
NT Y V D +S + SG ++ D+++ I WP+ D +SEKD+N P LN+I
Sbjct: 124 ENTAYTYLVNDHWSADAVSGYSFLNLADETVAIDWPI-DLAKAELSEKDRNHPRLNEIK 181
>gi|27753583|dbj|BAC55217.1| 3,5-epimerase [Streptomyces sp. TP-A0274]
Length = 206
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHF 58
+ + R F D RG F Y E +F Q NHS S G +RG+H+
Sbjct: 6 LTVEGAVEFTPRVFPDDRGKFVSPYQEAAFTEAHGAPLFPVAQTNHSVSRR-GVVRGVHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR DI VDIR SPT+G W ++ + + Y P G H F+
Sbjct: 65 TATPPGTAKYVYCARGRALDIVVDIRVGSPTFGHWDAVLMDQLDHRASYFPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
LE +T + Y ++ Y EH+ ++ D ++ + P+ + P +SE+D+ L +
Sbjct: 125 LEDDTVMSYMLSGSYVAEHELSLSVLDPALGL--PIPTDLEPILSERDRAAVTLAEAQEK 182
>gi|109899366|ref|YP_662621.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoalteromonas atlantica
T6c]
gi|109701647|gb|ABG41567.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudoalteromonas atlantica
T6c]
Length = 187
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + ++ +K +K D RG+F++ + + L G Q Q NH+++ G++RGLHFQ
Sbjct: 9 LPLAGLKKVKRQKLGDERGFFARVFCAAELSICGWQGPIAQINHTYTAKKGSVRGLHFQL 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP+++ KLV C+ G+++D+ VD+R +S T+ W + +++++NG+ + IP GFAHGF TL
Sbjct: 69 PPFSEIKLVSCLKGQVWDVVVDLRADSATFLHWHAEKLTSDNGIGLLIPEGFAHGFQTLC 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+ E++Y + Y + ++G+ D + I WPL + SE+DQ L +
Sbjct: 129 DDVELLYCHSQAYQPKAEAGLNLLDPRLSINWPLPISQC---SERDQAF-SLLDAE---- 180
Query: 181 YDGLPL 186
Y G+ L
Sbjct: 181 YAGVDL 186
>gi|255327299|ref|ZP_05368373.1| dTDP-4-dehydrorhamnose reductase [Rothia mucilaginosa ATCC 25296]
gi|255295579|gb|EET74922.1| dTDP-4-dehydrorhamnose reductase [Rothia mucilaginosa ATCC 25296]
Length = 471
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
I + I+ D+RGWF + + + + GL VQ+N SF+ GT RG+H +
Sbjct: 11 EIPGLLIIDLPVHGDNRGWFKENWQREKMVAAGLPDFNPVQNNISFNASVGTTRGIHAE- 69
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K V GRIF VD+R I++P G + F TLE
Sbjct: 70 ---PWDKYVSVATGRIFGAWVDLRAGESFGKVVTVELG---PDTAIFVPRGVGNSFQTLE 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
NT Y V D +S + SG ++ D+++ I WP+ D +SEKD+N P LN+I
Sbjct: 124 ENTAYTYLVNDHWSADAVSGYSFLNLADETVAIDWPI-DLAKAELSEKDRNHPRLNEIK 181
>gi|257057034|ref|YP_003134866.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Saccharomonospora viridis DSM
43017]
gi|256586906|gb|ACU98039.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Saccharomonospora viridis DSM
43017]
Length = 202
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + F D RG F Y + +G + Q N+S S GTIRG+HF+
Sbjct: 6 LAVRDAYEFVPPAFPDRRGLFVAPYQEPAFVEAVGHRLTVAQTNNSVSRR-GTIRGVHFR 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C G + D+ VD+R SPT+G W + + + +Y+ G H FM L
Sbjct: 65 DTPPGQAKYVYCAHGALLDVVVDLRVGSPTFGQWDVVRLDSTAMRCVYLAEGLGHAFMAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E T + Y + Y + G+ D +++ WP + P +S+KD P L Q
Sbjct: 125 EDGTVMTYLCSTGYEPSAEHGITPLDPELNLPWP--SDVEPVLSDKDAAAPTLAQA 178
>gi|25026899|ref|NP_736953.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
efficiens YS-314]
gi|259506038|ref|ZP_05748940.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Corynebacterium efficiens YS-314]
gi|23492179|dbj|BAC17153.1| putative dTDP-4-keto-6-deoxyglucose-3,5- epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
efficiens YS-314]
gi|259166374|gb|EEW50928.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Corynebacterium efficiens YS-314]
Length = 459
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I+ + I+ D+RGWF + + + + +GL D VQ+N SF+ GT RGLH +
Sbjct: 15 IDGLLIVDFPVHGDNRGWFKENWQRQKMLAVGLPDFGPVQNNMSFNATAGTTRGLHAE-- 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F D+R S TYG V+ EI+ + +Y+P G A+GF LE
Sbjct: 73 --PWDKFVSVGTGRVFGAWCDLREGSATYGAVVTQEITP--DIGVYVPRGVANGFQALED 128
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V D +S + V D ++ I WPL L +SEKD+N P L
Sbjct: 129 ETLYTYLVNDHWSPDAQYSNVNLADPALGIEWPLP---LTEMSEKDKNHPMLVDA 180
>gi|182439720|ref|YP_001827439.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326780384|ref|ZP_08239649.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces cf. griseus
XylebKG-1]
gi|267042|sp|P29783|RMLC_STRGR RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName:
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase;
AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase;
AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose
3,5-epimerase; AltName: Full=dTDP-L-rhamnose synthetase
gi|581676|emb|CAA44442.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces griseus]
gi|62896326|emb|CAH94326.1| dTDP-4-dehydrorhamnose 3,5-epimerase StrM [Streptomyces griseus
subsp. griseus]
gi|178468236|dbj|BAG22756.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326660717|gb|EGE45563.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces cf. griseus
XylebKG-1]
Length = 200
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + +TR F D RG F + YS++ L+ LG Q N S S G +RG+HF
Sbjct: 4 LSVQGAWLSETRAFADDRGEFQELYSARSLRGALGYDPGVAQVNRSVSRR-GVLRGVHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G + D+ VDIR SPTY W ++ + +Y+ G H FM L
Sbjct: 63 QLPPSQAKYVTCLSGAVLDVVVDIRTGSPTYRAWEAVRLDD-PHRSLYVEAGLGHSFMAL 121
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y + Y+ + GV D + I WP D I P +SEKD+ P + +++
Sbjct: 122 TDDAVVVYLTSQGYAAGREHGVHPLDPDLGIAWP--DGIEPVLSEKDRQAPGIAEME 176
>gi|163850282|ref|YP_001638325.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
PA1]
gi|163661887|gb|ABY29254.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
PA1]
Length = 177
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + + D RG+F++T E GL F Q + SF+ GT+RG+HF +
Sbjct: 6 LALPGLFRVVPEPHADERGFFARTQCESEFAERGLVGHFTQSSVSFNHRRGTVRGMHFSK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+A+ KLVRC AG I D +D+R +SPTY S+ +SA N +YIP G AHGF TL
Sbjct: 66 LPHAETKLVRCTAGAIHDAVIDLRPDSPTYLRTTSVTLSAANRHALYIPAGLAHGFQTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ E++Y + + GV W D + + WP T ++ +D P
Sbjct: 126 DDAEILYMIDRPFVASAADGVRWDDPAFGLVWPEPVT---VIAPRDLAFPDWA 175
>gi|304312288|ref|YP_003811886.1| DTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium HdN1]
gi|301798021|emb|CBL46243.1| DTDP-4-dehydrorhamnose 3,5-epimerase [gamma proteobacterium HdN1]
Length = 183
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
V + D RG F++ + + + E+ F Q N S + GT+RG+H+Q PP
Sbjct: 8 FEGVYEIGHTPLTDERGCFTRLFCEREMTEIRSNLHFTQVNWSQTKSSGTVRGMHYQMPP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A+AKL+RC+ GR+FD+ VD+R S T+ W + E+S +N I++P GFAHGF +L N
Sbjct: 68 AAEAKLIRCLHGRVFDVIVDLRPASKTFLQWHATELSEDNFRAIFVPEGFAHGFQSLSEN 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
++Y T ++ ++G+ D + I+WPL SE+D++ P ID+ F
Sbjct: 128 AHLLYMHTVAWTPACEAGLRHDDPRLAISWPLPVLQC---SERDRHHPL---IDAKFT 179
>gi|302557857|ref|ZP_07310199.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces griseoflavus
Tu4000]
gi|302475475|gb|EFL38568.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces griseoflavus
Tu4000]
Length = 183
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + + D RG+F +T+ +++++ GL FVQD+ S S G +RGLH +
Sbjct: 9 ITGAYLFEPTPYADERGFFCRTFDAEVVRSAGLDPDAFVQDSLSRSVK-GVLRGLHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC GRIFD+ VD+R +SPTY + E+S +Y+P G AHGF L
Sbjct: 67 GEGEAKLVRCSYGRIFDVVVDLRPDSPTYLGRATFELSGETQATLYVPAGCAHGFQALTD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S +D+ P L ++
Sbjct: 127 TADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPVTS---MSRRDREAPGLAEV 177
>gi|284997405|ref|YP_003419172.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
L.D.8.5]
gi|284445300|gb|ADB86802.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
L.D.8.5]
Length = 178
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 10/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V ++K + F D+RG+F + + K++G+ +Q N SFS G +RGLH+Q PP
Sbjct: 11 GVLLIKPKVFPDNRGYFKEIFKESDFKKVGIPTP-LQINISFS-RYGVVRGLHYQLPPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q K+V I G+I D+AVDIR+ +G +VS E+S N ++IP GFAHGF LE +T
Sbjct: 69 QGKIVTVIKGKILDVAVDIRKGPS-FGKYVSAELSEYNHYMLWIPPGFAHGFQALESSTI 127
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V + + YS H+ + + I WP+ D +SEKD P L + +
Sbjct: 128 VYFITHNEYSPTHERCINYS----MIDWPIKD---IIISEKDSKCPPLEKAE 172
>gi|294817646|ref|ZP_06776288.1| Staurosporine biosynthesis 3,5-epimerase StaE [Streptomyces
clavuligerus ATCC 27064]
gi|326446650|ref|ZP_08221384.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Streptomyces clavuligerus
ATCC 27064]
gi|294322461|gb|EFG04596.1| Staurosporine biosynthesis 3,5-epimerase StaE [Streptomyces
clavuligerus ATCC 27064]
Length = 233
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHF 58
+ + + R F D RG F + E G Q NHS S G +RGLHF
Sbjct: 6 LAVEGALVFTPRVFPDDRGLFLSPFQEAAFTEAHGGPLFPVAQSNHSLSRR-GVVRGLHF 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C G DI VDIR SPT+G W ++ + + Y+P G H F+
Sbjct: 65 TVTPPGTAKYVHCARGAALDIVVDIRVGSPTFGRWDAVLMDQRDHRAAYLPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE +T + Y +++ Y E++ ++ D ++ + P+ I P +SE+D+ L +
Sbjct: 125 LEDDTVMSYLLSESYVPENELALSVLDPALGL--PVPRGIEPVLSERDRTAVTLAEA 179
>gi|159037934|ref|YP_001537187.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinispora arenicola
CNS-205]
gi|157916769|gb|ABV98196.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinispora arenicola
CNS-205]
Length = 200
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFD-CGTIRGLHFQ 59
+ I+ D RG F+ Y +F + S + G +RG+HF
Sbjct: 6 LAIDGAVEFTPSVHRDERGLFASPYQEPAFTATFGWPLFPVRDLSHNVSARGVLRGIHFT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +AK V C G++ D +D+R SPT+GCW S E+ + IYIP G H F++L
Sbjct: 66 STPPGRAKYVYCPYGKVQDFLIDLRVGSPTFGCWDSTELGGDTCRAIYIPVGVGHAFLSL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++ ++Y ++ Y E + ++ D ++ + PL I P S++D+ P L +
Sbjct: 126 VDDSMIVYAMSKGYVAEDELAISPLDPALGL--PLPAGITPLQSDRDRAAPTLAEA 179
>gi|297191548|ref|ZP_06908946.1| epimerase [Streptomyces pristinaespiralis ATCC 25486]
gi|297150986|gb|EFH30918.1| epimerase [Streptomyces pristinaespiralis ATCC 25486]
Length = 183
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + + D RG F +T+ + +++ +GL FVQD+ S S G +RGLH +
Sbjct: 9 IAGAYLFEPTPYADERGLFCRTFDADVVRSVGLDPNAFVQDSVSRSVR-GVLRGLHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC G IFD+ VD+R +SPTY S E+S + +YIP G AHGF L
Sbjct: 67 GAGEAKLVRCSYGNIFDVVVDLRPHSPTYRNVASFELSGETQVTLYIPAGCAHGFQALSA 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S +D+ P L ++
Sbjct: 127 TADTSYRIDRRHDPAEDVTIAFDDPELAIAWPLPVTS---MSRRDREAPSLAEV 177
>gi|302670473|ref|YP_003830433.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC1 [Butyrivibrio
proteoclasticus B316]
gi|302394946|gb|ADL33851.1| dTDP-4-dehydrorhamnose 3,5-epimerase RfbC1 [Butyrivibrio
proteoclasticus B316]
Length = 176
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ K +D RG+FS+ +K+ GL FVQ + S ++ GT+RG+H Q
Sbjct: 9 EGCYLFKRNIPKDERGYFSRIADVNEIKKTGLNAEFVQISASRNYKKGTLRGMHMQIGTS 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
A+ K + C+ G ++D+ +D+R+ SPTY + S +S NG IYIP G AHGF++L N+
Sbjct: 69 AEEKYISCVEGEVYDVCLDLRKTSPTYLKYCSAVLSEENGYAIYIPKGCAHGFVSLRDNS 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
++IY +T+ + + + G W D + I WP+L +S++D N P
Sbjct: 129 QLIYFMTNEHDKQAERGYLWSDPAFSIDWPILPE---VISDRDNNWPL 173
>gi|48477383|ref|YP_023089.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Picrophilus torridus DSM
9790]
gi|48430031|gb|AAT42896.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Picrophilus torridus DSM
9790]
Length = 178
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+++K +KF+D RG+F + Y + + ELG+++ F Q N S+S RG HFQR
Sbjct: 9 EIEDVKLIKIKKFDDERGFFEELYRNNVFHELGIKNNFNQINLSYS-KKNVFRGFHFQRN 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P Q KLV I+GRI D A+D+RR S Y V E+ NG ++IP GFAHGF+ LE
Sbjct: 68 PKPQGKLVTVISGRIIDYAIDLRRRSVYYKKHVCYELE--NGRMLFIPEGFAHGFLALED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ V+Y T+ + + DSGV + D ++I P +SEKD++L LN++D F
Sbjct: 126 -SYVLYLATNEFDINLDSGVIYNDDELNIKLP----DNIIISEKDRSLKKLNELDIDF 178
>gi|326774961|ref|ZP_08234226.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces cf. griseus
XylebKG-1]
gi|326655294|gb|EGE40140.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces cf. griseus
XylebKG-1]
Length = 204
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQ 59
M I+ F D RG F +Y + +F SFS +RG+H+
Sbjct: 6 MTIDGAVEFTPAVFPDDRGDFLSSYQESDFRTAMGTSLFPVAQASFSRSRSGVMRGVHYT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P K V C G D+ VD+R SPT+G W S+ + +Y+P G H F+ L
Sbjct: 66 ATPPGCEKYVTCPRGSALDVVVDLRVGSPTFGTWDSVVLDQETHRAVYLPQGVGHLFLAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T + Y ++ Y ++ ++ D + + P+ +S +D+ P L +
Sbjct: 126 EDDTVMSYLLSREYVPGNERAISPFDPRLAL--PVPGPSDVMISRRDREAPLLAEA 179
>gi|182434422|ref|YP_001822141.1| putative epimerase [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178462938|dbj|BAG17458.1| putative epimerase [Streptomyces griseus subsp. griseus NBRC 13350]
Length = 204
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQ 59
M I F D RG F +Y + +F SFS +RG+H+
Sbjct: 6 MTIEGAVEFTPAVFPDDRGDFLSSYQESDFRTATGTSLFPVAQASFSRSRSGVMRGVHYT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P K V C G D+ VD+R SPT+G W S+ + +Y+P G H F+ L
Sbjct: 66 ATPPGCEKYVTCPRGSALDVVVDLRVGSPTFGTWDSVVLDQETHRAVYLPQGVGHLFLAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T + Y ++ Y ++ ++ D + + P+ +S +D+ P L +
Sbjct: 126 EDDTVMSYLLSREYVPGNERAISPFDPRLAL--PVPGPSDVMISRRDREAPLLAEA 179
>gi|326383444|ref|ZP_08205131.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197850|gb|EGD55037.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gordonia neofelifaecis NRRL
B-59395]
Length = 203
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I+ + D RG F + + + ++ E +G + Q N S S G IRG+HF
Sbjct: 6 LTIDGAWAFTPVQHGDGRGLFLEAFKADVVAETIGHRLDLAQVNTSVSAA-GVIRGVHFS 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C AG + D+ VDIR SPT+G W ++ + + +Y+ G H F +L
Sbjct: 65 DVPPGQAKYVTCSAGAVLDVVVDIRVGSPTFGRWDAVLLDDLDRRAVYLSEGLGHAFCSL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQI 175
+ + V Y + Y + G+ D I I WP + + +SEKD P L Q
Sbjct: 125 QDGSTVTYLCSTGYRPGAEHGIDPMDPEIGIAWPKVARDGSPLEFVLSEKDAAAPSLVQA 184
>gi|609644|gb|AAA88702.1| CDP-3,6-dideoxy-D-glycero-D-glycero-4-hexulose-5-epimerase
[Yersinia pseudotuberculosis]
Length = 187
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 68/179 (37%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++I +++ KF DSRG F +T+ S E G+ ++ +S S IRG+HFQ
Sbjct: 15 LDIEGCYLIEFNKFIDSRGTFVKTFHSDFFSENGIVLDMREEFYSIS-AKNVIRGMHFQM 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
PP KLV C+ G + D+ +DIR++S TYG + S+E+S N L +++P G AHGF++L
Sbjct: 74 PPAEHDKLVYCVNGAVLDVILDIRKDSKTYGEYFSIELSYENSLALWVPKGLAHGFLSLA 133
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
N+ + YK + ++VE DSG+ W S WP+ + P +SEKD +L + ++ DS F
Sbjct: 134 DNSIMFYKTSSVHNVECDSGIKWN--SFGFKWPIDN---PIISEKDNSLCYFDEFDSSF 187
>gi|295676133|ref|YP_003604657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1002]
gi|295435976|gb|ADG15146.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. CCGE1002]
Length = 183
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S+ + + FVQD H G +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFIDEYGFCFESFSADEFSDDVAQGFNFVQDRHLR-AVHGVLRGLHYQVQ 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L+R + G IFD+AVD+R NSP +G W ++ N QI++P GFAHGF+ L
Sbjct: 69 R-PQGRLLRVVRGEIFDVAVDVRLNSPNFGKWSGEYLNEENQRQIWVPPGFAHGFVVLSE 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W D I I WP+ P + KD L + ++
Sbjct: 128 VAECVWKTTEYWFPELERCLLWSDPDIGIDWPI--DFQPILGSKDAAGRRLYEAEN 181
>gi|126726120|ref|ZP_01741962.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacterales bacterium
HTCC2150]
gi|126705324|gb|EBA04415.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacterales bacterium
HTCC2150]
Length = 155
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/156 (53%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query: 30 LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT 89
+ + FVQDNHS S D GT+RGLHFQ PP+AQAKLVRC GR+FD+AVDIR+ SPT
Sbjct: 1 MAAASVTLDFVQDNHSMSADIGTVRGLHFQSPPHAQAKLVRCGRGRLFDVAVDIRKGSPT 60
Query: 90 YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSID 149
YG WV E+S NG Q+ +P GF HGF T E +TE+ YK TD+Y+ E D V + I
Sbjct: 61 YGQWVGAELSFENGAQLLVPAGFLHGFSTREPDTEICYKCTDYYAPECDGAVRFDCPDIG 120
Query: 150 ITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLP 185
I W L D I +S KD P L DSPF ++G P
Sbjct: 121 IDWGLGD-IEAKLSGKDAAAPVLADFDSPFVWEGTP 155
>gi|288549268|gb|ADC52828.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
platensis]
Length = 200
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + +TR F D RG F + YS + L LG + Q N S S G +RG+HF
Sbjct: 4 LSVKGAWLSETRAFADDRGEFQELYSGRSLSAALGYEPGVAQVNRSVSRQ-GVLRGVHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P QAK V C++G + D+ VDIR SPTY W ++ + +Y+ G H FM L
Sbjct: 63 QVPPGQAKYVTCLSGAVLDVVVDIRTGSPTYRSWEAVRLDD-PHRSLYVEAGLGHSFMAL 121
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y + Y+ + GV D + I WP + I P +S+KDQ P + +++
Sbjct: 122 TDDAVVVYLTSQGYASGREHGVHPLDPDLAIAWP--EHIEPVLSKKDQQAPGIKEME 176
>gi|170781065|ref|YP_001709397.1| putative dTDP-sugar epimerase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155633|emb|CAQ00751.1| putative dTDP-sugar epimerase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 201
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + L + D RG F + Y ++E G Q N S S G +RG+HF
Sbjct: 6 LAVPDAYELTPIQRTDDRGVFLEWYRFDEIQEAVGHPLDLRQANMSVS-RRGVVRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V+ ++G + D VDIR SPT+G W S+ ++ +YI G H F+ L
Sbjct: 65 DVPRGQAKHVKAVSGAVLDFIVDIRVGSPTFGQWDSVRLNTETHKAVYISEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ V Y V+D Y+ + G+ D + + +P + P +S KD P L
Sbjct: 125 TDDAAVTYLVSDVYNPGAEHGITPLDPELGLVFP-EEAGEPLLSPKDLEAPTL 176
>gi|315937108|gb|ADU56116.1| hypothetical protein CA878-38 [uncultured organism CA878]
Length = 205
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQ-DVFVQDNHSFSFDCGTIRGLHF 58
+ + R F D RG F + + + G Q NHS S G +RG+H+
Sbjct: 6 LVVEGAIEFTPRVFPDDRGLFISPFQEEAFVQAHGGPLFRVAQTNHSMS-KRGVVRGVHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C G+ DI +D+R SPT+G W ++ + + +Y P G H F+
Sbjct: 65 TATPPGVAKYVYCARGKALDIVIDLRVGSPTFGRWDAVLMDQQDHRAMYFPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE +T + Y ++ Y + + ++ D ++ + P+ + P +S++D+ L +
Sbjct: 125 LEDDTVMSYMISGRYVAQDELALSALDPALGL--PIDAGMAPILSDRDRAAITLAEA 179
>gi|329940085|ref|ZP_08289367.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
griseoaurantiacus M045]
gi|329300911|gb|EGG44807.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces
griseoaurantiacus M045]
Length = 185
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRPPY 63
+ + + D RG+F +T+ + +L+ +GL FVQD+ S S G +RG+H +
Sbjct: 11 GAYLFRPTPYADERGFFCRTFDADVLRSVGLDPHAFVQDSLSRSAR-GVLRGMHLR-SGA 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
+AKLVRC +G++FD+ VD+R +SPTY E+S +Y+P G AHGF L
Sbjct: 69 GEAKLVRCSSGKVFDVVVDLRPDSPTYLGRAFFELSGETQETLYVPAGCAHGFQALTATA 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D + + D + I WPL T VS +D+ P L ++
Sbjct: 129 DTSYRIDRPHDPAEDVTIRYDDPELAIPWPLPVTS---VSPRDREAPGLAEV 177
>gi|209521671|ref|ZP_03270362.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. H160]
gi|209497888|gb|EDZ98052.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. H160]
Length = 183
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S+ + + FVQD H +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFVDEFGFCFESFSADEFSDDVAQGFNFVQDRHLR-AVHRVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L+R + G +FD+AVD+R NSP +G W +S N Q+++P GFAHGF+ L
Sbjct: 68 QRPQGRLLRVVRGEVFDVAVDVRLNSPNFGKWSGEYLSDANQRQVWVPPGFAHGFVVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W D I I WP+ P + KD L + ++
Sbjct: 128 VAECVWKTTEYWFPELERCLLWSDPDIGIEWPI--DFEPILGSKDAAGRRLYEAEN 181
>gi|310827983|ref|YP_003960340.1| dTDP-4-dehydrorhamnose 3 [Eubacterium limosum KIST612]
gi|308739717|gb|ADO37377.1| dTDP-4-dehydrorhamnose 3 [Eubacterium limosum KIST612]
Length = 189
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + I+ ED RG+F +++ ++ + G++ +D S+S G +RGLHFQ
Sbjct: 11 IRDLMIIHPFYMEDERGFFLKSFEKEIFWQNGIKTEIFEDFESYSIK-GVLRGLHFQTEK 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAKLVR + G I+D+AVD+R+ S T+G W + +S +N +IP GFAHGF+ L N
Sbjct: 70 -PQAKLVRALTGTIYDVAVDLRKTSKTFGKWHAEILSVDNHKAFFIPKGFAHGFLVLSDN 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
V YK +S E D+G+ W D + I WP VSEKD+ L +
Sbjct: 129 ALVSYKCEGAFSKETDTGIVWNDPELKIDWPTNQVDEIIVSEKDRRLQTFSHFKEK 184
>gi|23004340|ref|ZP_00047721.1| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Magnetospirillum magnetotacticum MS-1]
Length = 198
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + L R+ D RG F + +++ L+E G Q N S S G +RG+H+
Sbjct: 6 LTVPGAWELLPRQHADDRGVFLEWFTAAALREATGRDLDLAQANASVSRA-GVVRGIHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+AG + D+ VD+R SP +G W ++ + A+ +++P G H FM L
Sbjct: 65 DVPPGQAKYVTCVAGSVLDVVVDLRVGSPAFGRWDAVLLDAHERRAVFLPEGVGHAFMAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTI----LPSVSEKDQNLPFLNQI 175
E V+Y + Y+ E + GV D + I WP +PS S KD P L +
Sbjct: 125 EDGATVVYLCSSGYAPEREHGVDPTDPELAIEWPATGPDGRALVPSFSAKDAAAPSLREA 184
>gi|227829530|ref|YP_002831309.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
L.S.2.15]
gi|227455977|gb|ACP34664.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
L.S.2.15]
Length = 178
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V ++K + F D+RG+F + + +++ + +Q N SFS G +RGLH+Q PP
Sbjct: 11 GVILIKPKAFPDNRGYFKEIFKESEFRKMNIPTP-LQANISFSKP-GVVRGLHYQLPPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q K+V + GRI D+AVDIR+ S ++G +V E++ +N ++IP GFAHGF LE +T
Sbjct: 69 QGKIVTVMKGRIIDVAVDIRKKSKSFGKYVYAELNEDNHYMLWIPPGFAHGFQALEDSTV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + + YS H+ + + I WP+ VSEKD P L + +
Sbjct: 129 LYFVTHNEYSPHHERCINYT----MIDWPIK---SVIVSEKDAKCPPLERAE 173
>gi|302523922|ref|ZP_07276264.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. AA4]
gi|302432817|gb|EFL04633.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. AA4]
Length = 182
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V + D RG F++T+ +++ E GL Q + G +RG+H +
Sbjct: 7 DLAGVLLFVPEPHHDDRGLFTRTFDTEIAAEHGLNAAAFQQDSQSRSRLGVLRGMHGR-S 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC G + D+ VDIR S T+G + + +YIP GF HGF L
Sbjct: 66 GRGEAKLVRCARGAVHDVLVDIRPGSATFGRQQAFRLDDVEFAHLYIPPGFLHGFQVLTE 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+V Y++ + D V + D + I WPL + +S +D +
Sbjct: 126 YADVCYRIDRPHDPAEDLAVRYDDPDLAIDWPLP---VSVLSARDAAAGTWADL 176
>gi|15897733|ref|NP_342338.1| dTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-1) [Sulfolobus
solfataricus P2]
gi|6015644|emb|CAB57471.1| dTDP-4-dehydrorhamnose 3,5-epimerase (RfbD) [Sulfolobus
solfataricus P2]
gi|13814014|gb|AAK41128.1| dTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-1) [Sulfolobus
solfataricus P2]
Length = 176
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V ++K + F D RG+F + + + + + VQ N SFS G +RGLH+Q P
Sbjct: 11 GVLLIKPKVFPDKRGFFLELFKATDFSKHNIPMP-VQVNMSFS-VRGVVRGLHYQITPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLV G+I D+AVD+R++SPT+G + S E+S +N ++IP GFAHGF L+ +
Sbjct: 69 QGKLVFVPKGKILDVAVDVRKSSPTFGKYTSAELSESNHHMLWIPPGFAHGFQALDDSLV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V + + YS +H+ + + I WP+ + VS+KD+ P L++ +
Sbjct: 129 VYFVTHNDYSPQHERCINYS----YIEWPIKE---IIVSDKDKQCPPLDKAE 173
>gi|159186325|ref|NP_355864.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium tumefaciens
str. C58]
gi|159141459|gb|AAK88649.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Agrobacterium tumefaciens
str. C58]
Length = 175
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ T DSRG F++T+ + + L F Q + S S TIRGLHFQRP
Sbjct: 7 KIEGLLVVNTIPVRDSRGSFARTFCKREFESNALVSDFSQHSLSLSKLKHTIRGLHFQRP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ + KLV C+ G I+D+AVD+RR SPTY WV +SA+NG Q YIP GFAHGF +L
Sbjct: 67 PHQETKLVSCVKGSIWDVAVDLRRGSPTYLQWVGTVLSADNGAQFYIPEGFAHGFQSLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
+ V Y ++ Y+ +G+ + +I + WP +SEKD P
Sbjct: 127 DVAVSYLISVPYAEASAAGIRHDEPAIGVEWPAP---ASVISEKDLGWP 172
>gi|83309148|ref|YP_419412.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Magnetospirillum magneticum AMB-1]
gi|82943989|dbj|BAE48853.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Magnetospirillum magneticum AMB-1]
Length = 194
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V IL+ R+F D RG F S ++ G+ FVQ +HS S GT+RGLH Q P
Sbjct: 19 LSDVLILEPRQFRDERGVFFDALSPEICAAAGMSAAFVQHSHSVSRK-GTVRGLHIQ-LP 76
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KLVR + G +FD+ D+R SPT+G + + +SA N +++ G AHGFM LE +
Sbjct: 77 RTQGKLVRVVRGSVFDVVADVRPQSPTFGRHIHVRLSAENRRMLWVGHGLAHGFMALEDD 136
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
+E+IY + D Y + W D + I WP + P++S KD
Sbjct: 137 SEMIYALDDVYDPGGQWTIRWNDPDLAIGWP---DLEPNLSPKD 177
>gi|254559532|ref|YP_003066627.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
DM4]
gi|254266810|emb|CAX22609.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
DM4]
Length = 177
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 3/170 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + + D RG+F++T E GL F Q + SF+ GT+RG+HF +
Sbjct: 6 LALPGLFRVVPEPHADERGFFARTQCESEFAERGLVGHFTQSSVSFNHRRGTVRGMHFWK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+A+ KLVRC G I D +D+R +SPTY S+ +SA N +YIP G AHGF TL
Sbjct: 66 LPHAETKLVRCTGGAIHDAVIDLRPDSPTYLRTASVMLSAANRHALYIPAGLAHGFQTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
+TE++Y + + GV W D + + WP T ++ +D P
Sbjct: 126 DDTEILYMIDRPFVASAADGVRWDDPAFGLAWPEPVT---VIAPRDLAFP 172
>gi|297160277|gb|ADI09989.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces bingchenggensis
BCW-1]
Length = 221
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ R D+RG F ++Y+ L + G V +Q N+S S T+RG+H R P
Sbjct: 9 PDAYRIVPRHHTDARGSFFESYAYGQLARQTGHVFVPLQVNYSVSAR-NTLRGVHGVRLP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAK V C+ G + D+ VD+R SPT+G + + + A+ G +Y+ G HGF+ L +
Sbjct: 68 PGQAKFVTCVRGALLDVVVDLRLGSPTFGAYDTNMLDADQGTAVYVAEGLGHGFVALTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
T + Y + Y + D ++ + W L T P +SEKD P L + +
Sbjct: 128 TCISYLCSTQYVPGTQIDLHPLDPALGLPWHLGLTDEPLISEKDARAPSLAEAAN 182
>gi|307328090|ref|ZP_07607270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces violaceusniger
Tu 4113]
gi|306886209|gb|EFN17215.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces violaceusniger
Tu 4113]
Length = 198
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ ++ D RG F Y+ G Q++HS S GT+RG+H+
Sbjct: 6 LAVSGAYEFSPDVHRDERGAFVAHYTEAAFAAAVGHPLRLGQNHHSVS-RRGTVRGVHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK+V C +G + D+ VD+R SPT+G W S+ + + +Y+ G H F+ L
Sbjct: 65 DVPPGQAKMVTCTSGELLDVVVDLRMGSPTFGHWDSVRLDPVSYRAVYLEEGLGHAFIAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+T Y + Y+ + + D ++ + WP + VS++D+N P L + +
Sbjct: 125 RDDTVAAYLNSAEYNPGAEHEIDPFDPALGLPWPT--DLEYLVSQRDRNAPGLAEAE 179
>gi|407886|emb|CAA51671.1| unnamed protein product [Streptomyces griseus]
gi|742317|prf||2009361D ORF 4 in daunorubicin synthesis gene
Length = 212
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHF 58
+ + + D RG F + + ++ +F Q NHS S G +RG+H+
Sbjct: 6 LAVEGAYTFVPEVYPDDRGLFVSPFREQGFTKVVGHPLFPVRQTNHSLSGR-GVVRGVHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR DI VD+R SPTYG W ++E+ +Y P G H F+
Sbjct: 65 TVTPPGTAKYVYCARGRSLDIIVDVRVGSPTYGRWDAVELDPGEFRAVYFPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
LE +T + Y ++ Y H+ V+ D ++ + P+ P +SE+D+ P L
Sbjct: 125 LEEDTVMSYMLSGEYVPSHELAVSALDPALGL--PVPADTEPLLSERDRVAPDLA 177
>gi|13541732|ref|NP_111420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermoplasma volcanium GSS1]
gi|14325138|dbj|BAB60063.1| NDP-sugar epimerase [Thermoplasma volcanium GSS1]
Length = 179
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 8/174 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + ++ED+RG+F + Y + + L FVQDNHSFS G IRGLHFQR
Sbjct: 9 EIPDVIHIVCNRYEDNRGYFEERYKASEF-DRILHVRFVQDNHSFSRR-GVIRGLHFQRE 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KLV I GRI+D+AVD+R++S T+G WV +S N ++IP GFAHGF LE
Sbjct: 67 PMAQGKLVGVITGRIYDVAVDLRKDSVTFGKWVYRVLSNNEM--LWIPRGFAHGFQALED 124
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V+YKV + +S +H+ G+ + D + I WP+ D P VSEKD L
Sbjct: 125 -SHVVYKVDNEFSRQHEDGIIFNDPDLAIDWPIKD---PIVSEKDIKLGTFRNF 174
>gi|296116052|ref|ZP_06834672.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter hansenii
ATCC 23769]
gi|295977406|gb|EFG84164.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gluconacetobacter hansenii
ATCC 23769]
Length = 182
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 71/169 (42%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+ + + D RG F + + L E G+ F+Q + S + GT+RGLHFQRP
Sbjct: 7 KIFGVQKITLPRHCDERGSFGRIFDQGYLLENGISCDFIQTSISRTSYAGTLRGLHFQRP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PYA+AKLV C+ G I+D+ D+R +SPTY + S +S ++ +YIP G AHGFMTL
Sbjct: 67 PYAEAKLVHCLRGEIYDVICDLRPDSPTYLLYESFYLSFSSNEMVYIPPGCAHGFMTLND 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
+ EV+Y ++ Y H SGV + D + I+WP T +SEKD N P
Sbjct: 127 DVEVLYAMSSIYMQSHASGVRYNDPRLGISWPRPVTY---ISEKDLNWP 172
>gi|302868467|ref|YP_003837104.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora aurantiaca
ATCC 27029]
gi|315505157|ref|YP_004084044.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Micromonospora sp. L5]
gi|302571326|gb|ADL47528.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora aurantiaca
ATCC 27029]
gi|315411776|gb|ADU09893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora sp. L5]
Length = 210
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHF 58
+ + R F D RG F + E +F Q NHS S G +RG HF
Sbjct: 10 LKVEGAVEFTPRVFPDDRGIFVSPFQETAFVEALGHPLFPVAQTNHSRSRK-GVVRGAHF 68
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C G+ D VDIR SPT+G + + + +Y+P G AH F
Sbjct: 69 TLTPPGIAKYVYCARGKTIDFVVDIRVGSPTFGQFDQVLLDQEAFRAVYLPVGVAHAFAA 128
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE +T V Y ++D Y H+ V D ++++ PL + +S++D++ P + +
Sbjct: 129 LEDDTVVSYMLSDGYVEAHEKAVNVLDPALNL--PLPTGVERVLSDRDRSAPTIEEA 183
>gi|325290741|ref|YP_004266922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Syntrophobotulus glycolicus
DSM 8271]
gi|324966142|gb|ADY56921.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Syntrophobotulus glycolicus
DSM 8271]
Length = 182
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 6/181 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ +LK + F D RG + Y S K LGL + ++ S IRGLHFQ P
Sbjct: 8 KISGCFLLKPKTFGDERGTLIKPYHSDSYKALGLHSEYNEELVVTSHK-NVIRGLHFQNP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q K+V C+ GRI D+ VDIR+ SPTYG W + N +Y+P G AHG+
Sbjct: 67 PFPQIKVVSCVMGRILDVVVDIRKGSPTYGEWEGFILDNENNYSLYVPEGMAHGYAVYSE 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
NT V Y++++ + + DSG+ W S + W + P +S KD L ++ +S F Y
Sbjct: 127 NTIVCYRMSNVFMPQLDSGIKWD--SAGVLWDIE---SPIISPKDSGLISFDKFESRFVY 181
Query: 182 D 182
Sbjct: 182 K 182
>gi|29827490|ref|NP_822124.1| dTDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces avermitilis
MA-4680]
gi|5921160|dbj|BAA84596.1| dTDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces avermitilis]
gi|29604590|dbj|BAC68659.1| dTDP-4-keto-6-deoxyhexose 3,5-epimerase [Streptomyces avermitilis
MA-4680]
Length = 225
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 77/175 (44%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + F D RG F Y +L E G +RG+HF
Sbjct: 32 LVVEGAVEFTPTVFPDERGLFVTPYQEPVLSEAVGHRFPTAQTCQSVSRRGVVRGVHFTA 91
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V C GR D VD+R SPT+G W S+ + +Y+P G H F+ LE
Sbjct: 92 TPPGQAKYVHCARGRALDFVVDLRTGSPTFGQWDSVLLDQERFRSVYLPIGVGHAFVALE 151
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+T ++Y ++ Y +++ ++ +D + + P +SE+D+ P L Q
Sbjct: 152 DDTAMVYLMSSGYVPQNEHALSPEDPDLALPLGHHLGRAPILSERDRRAPTLQQA 206
>gi|15131509|emb|CAC48377.1| putative 3,5 epimerase [Amycolatopsis balhimycina]
Length = 205
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHF 58
+ ++ R F D RG F + + E G Q NHS S G +RG+H+
Sbjct: 6 LAVDGAIEFTPRVFPDDRGLFVSPFQEEAFAEARGGPLFRVAQTNHSMS-KRGVVRGIHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C G+ DI VDIR SPT+G W ++ + + +Y P G H F+
Sbjct: 65 TMTPPGTAKYVYCARGKALDIVVDIRVGSPTFGRWDAVLLDQRDHRAMYFPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE +T + Y ++ Y ++ ++ D ++ + P+ + P +SE+DQ L +
Sbjct: 125 LEDDTAMWYLLSTAYVARNELALSVLDPALGL--PIDADVDPILSERDQVAVTLAEA 179
>gi|266631449|emb|CBA11560.1| NDP-hexose-3,5-epimerase [Streptomyces lydicus]
Length = 218
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++I +L K DSRG F + Y L + G Q N S S G +RG+H
Sbjct: 6 LSIEGGLLLSPDKITDSRGCFYEAYRPGELADHAGHPFTVAQTNFSVSAH-GVLRGIHGT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK+V C G + D+ VD+R+ SPT+G S + A +G +Y+ G H F+ L
Sbjct: 65 LTPPGQAKIVTCHRGAVLDVIVDLRQGSPTFGRHQSQVLRAESGAAVYLAEGLGHAFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+T V Y + + + D + I W VSEKD+ P L +
Sbjct: 125 TDDTCVGYLCSTPFVPGTQIDLDPFDPDLAIDWG--PAKDLHVSEKDRRAPGLAEA 178
>gi|240137353|ref|YP_002961822.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
AM1]
gi|240007319|gb|ACS38545.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium extorquens
AM1]
Length = 177
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + + D RG+F++T E GL F Q + SF+ GT+RG+HF +
Sbjct: 6 LALPGLFRVVPEPHADERGFFARTQCESEFAERGLVGRFTQSSVSFNHRRGTVRGMHFSK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+A+ KLVRC G I D +D+R +SPTY S+ +SA N +YIP G AHGF TL
Sbjct: 66 LPHAETKLVRCTGGAIHDAVIDLRPDSPTYLRTASVTLSATNRHALYIPAGLAHGFQTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+TE++Y + + GV W D + + W + ++ +D P
Sbjct: 126 DDTEILYMIDRPFVASAADGVRWDDPAFGLAW---LEPVTVIAPRDLAFPDWA 175
>gi|315606109|ref|ZP_07881140.1| dTDP-4-keto-L-rhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Actinomyces sp. oral taxon 180 str. F0310]
gi|315312391|gb|EFU60477.1| dTDP-4-keto-L-rhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Actinomyces sp. oral taxon 180 str. F0310]
Length = 475
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL VQ+N SF+ G RG+H +
Sbjct: 15 IPGFLRIDVTVHGDNRGWFKENWQREKMVALGLPDFHPVQNNISFNDQIGVTRGIHAE-- 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + ++ + G+ +++P G + + TLE
Sbjct: 73 --PWDKFVSVATGRVFGAWVDLREGPSFGTVYTTII---DPGVAVFVPRGVGNAYQTLEP 127
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V D +S + + D+++ I WP+ +SEKD+ P L + +PF
Sbjct: 128 NTAYTYLVNDHWSPDAQYTFLNLADETVAIDWPIP-LERAILSEKDKGHPRLGDV-APF 184
>gi|218960960|ref|YP_001740735.1| putative dTDP-6-deoxy-D-glucose-3,5-epimerase [Candidatus
Cloacamonas acidaminovorans]
gi|167729617|emb|CAO80529.1| putative dTDP-6-deoxy-D-glucose-3,5-epimerase [Candidatus
Cloacamonas acidaminovorans]
Length = 207
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V I+ D RG+F + + +L L + +++ S+S T+RGLHFQ
Sbjct: 27 SLEGVLIIHLDPKIDKRGYFLRFWDETILSAYNLPQRWCEESISYSKYKNTLRGLHFQYQ 86
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ+K + I G I D+ V+I +SP YG W E+S L ++IP +AHGF+T
Sbjct: 87 PFAQSKFISLIKGYISDVVVNIDLDSPNYGKWQLFELSDKEPLALFIPANYAHGFVTRTE 146
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
+ +IYK+ Y+ + G+ W DK + I W + P +S++D LN+I +
Sbjct: 147 DCYLIYKMDKPYNPLFEDGIIWNDKDLGINWKVS---APILSQRDSGFKTLNEITTK 200
>gi|145594749|ref|YP_001159046.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinispora tropica CNB-440]
gi|145304086|gb|ABP54668.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinispora tropica CNB-440]
Length = 203
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL--GLQDVFVQDNHSFSFDCGTIRGLHF 58
+ + + F D RG F + G Q NHS S G +RG+H+
Sbjct: 6 LAVQGAFVFTPEVFSDHRGLFVSPFQRLSFTAANGGPILPVAQTNHSMSRR-GVVRGVHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C G DI VD+R SPT+G W ++++++ +Y P G H F++
Sbjct: 65 TSTPPGVAKYVYCAVGEAIDIIVDVRVGSPTFGTWDAVQMNSQEFRAMYFPVGVGHAFVS 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
L T + Y +T Y EH+ V+ D ++ + P+ + +S++D+ P L +
Sbjct: 125 LADGTVMSYMLTGSYVPEHERVVSAFDPALGL--PIPTDLETIISDRDRVGPSLAE 178
>gi|254431562|ref|ZP_05045265.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanobium sp. PCC 7001]
gi|197626015|gb|EDY38574.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cyanobium sp. PCC 7001]
Length = 179
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + L++ F D RG F + + + Q N S + G IRGLH Q+ P
Sbjct: 10 LAGLVELRSTAFTDGRGSFLNAFRLEEMHAWWGHRAVHQINVSRTERVGAIRGLHGQQGP 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AKLVRC+ GR+FD+AVD+R S T G W SLE++ G IP G HGF LE
Sbjct: 70 TPEAKLVRCLRGRVFDVAVDVRPGSSTRGQWRSLELTPEAGNAWLIPEGVLHGFQVLEAG 129
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+E++Y + Y GV W D + I WPL +S++DQ LP L
Sbjct: 130 SELLYVHSAPYRPGDQVGVVWNDPELAIAWPLPALD---LSQRDQQLPLLA 177
>gi|260495066|ref|ZP_05815195.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_33]
gi|260197509|gb|EEW95027.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_33]
Length = 164
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/160 (42%), Positives = 103/160 (64%), Gaps = 5/160 (3%)
Query: 22 SQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAV 81
++Y+ KELG++++FVQDNHS S G +RGLHFQ+ Y+QAKLVR + G + DIA+
Sbjct: 1 MESYNYNTFKELGIENIFVQDNHSKSLK-GVLRGLHFQKGEYSQAKLVRVLKGAVLDIAI 59
Query: 82 DIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGV 141
D+R+NS T+G +V++E+S N +IP FAHGF+TLE NTE+ YK +FY+ + ++G+
Sbjct: 60 DLRKNSKTFGKYVTVELSEKNKKMFFIPRNFAHGFLTLEDNTEIFYKCDNFYNPKSEAGI 119
Query: 142 AWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
W DK ++I W + +SEKD+ +
Sbjct: 120 MWNDKDLNIEWNFKKYGINENELIISEKDKKNMSFKEYKK 159
>gi|237743314|ref|ZP_04573795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 7_1]
gi|229433093|gb|EEO43305.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 7_1]
Length = 164
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/160 (42%), Positives = 102/160 (63%), Gaps = 5/160 (3%)
Query: 22 SQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAV 81
++Y+ KELG++++FVQDNHS S G +RGLHFQ+ Y+QAKLVR + G + DIA+
Sbjct: 1 MESYNYNTFKELGIENIFVQDNHSKSSK-GVLRGLHFQKGEYSQAKLVRVLKGAVLDIAI 59
Query: 82 DIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGV 141
D+R+NS T+G +V++E+S N +IP FAHGF+TLE NTE YK +FY+ + ++G+
Sbjct: 60 DLRKNSKTFGKYVTVELSEKNKKMFFIPRNFAHGFLTLEDNTEFFYKCDNFYNPKSEAGI 119
Query: 142 AWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
W DK ++I W + +SEKD+ +
Sbjct: 120 MWNDKDLNIEWNFKKYGINENELIISEKDKKNMSFKEYKK 159
>gi|297625251|ref|YP_003687014.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose
3,5-epimerase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921016|emb|CBL55554.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose
3,5-epimerase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 494
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + LGL D VQ+N SF+ + G RG+H +
Sbjct: 24 IPGFLVFDLTVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNDEVGVTRGIHAE-- 81
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + GR+F VD+R + + G+ +Y+P G + + TLE
Sbjct: 82 --PWDKFISVATGRVFGAWVDLREGPSFGTVFTCEI---DPGVAVYVPWGVGNAYQTLEP 136
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V +S E + D+++ I WP+ +S+KD+ P L +PF
Sbjct: 137 NTAYTYLVNAHWSPEAKYTFLNLADETVAIDWPIA-LDDAILSDKDRAHPRL-DAVTPF 193
>gi|116250011|ref|YP_765849.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115254659|emb|CAK05733.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 167
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 15 EDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAG 74
D RG F++T+ ++ GL V+ Q N S + GT+RG+H+Q P + KLVR G
Sbjct: 7 SDDRGMFARTFDAQTFAAQGLVPVYPQCNVSQNHKRGTLRGMHYQAEPRPEIKLVRATRG 66
Query: 75 RIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134
R+FD+A+D+R +SP+Y W S+E+ A YIP G AHGF+TLE + E+ Y++++ Y
Sbjct: 67 RVFDVALDLRPDSPSYLKWASVELDAIRHNAFYIPAGCAHGFLTLEDDCELYYQMSETYV 126
Query: 135 VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
E GV W D + I WP + ++E+D L
Sbjct: 127 PELARGVRWDDPAFSIAWPFTPS---IINERDAAL 158
>gi|302607777|emb|CBW45689.1| putative dTDP-4-deoxyglucose 3,5-epimerase [Streptomyces
pristinaespiralis]
Length = 212
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + R D RG F + +G Q NHS S G +RG+HF
Sbjct: 19 LAVAGAYEFTPRVHRDERGLFVSPLQEEAFVAAVGRPFTVAQTNHSRS-ARGVMRGVHFT 77
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C GR D+ VDIR SPT+G W ++E+ + +Y+P G H F++L
Sbjct: 78 TTPPGQAKYVHCARGRAMDVVVDIRVGSPTFGAWDTVEMDTESFRAVYLPEGVGHAFLSL 137
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP- 178
E +T + Y V+ Y + + + D ++ + WP + ++S +D L + +
Sbjct: 138 EDDTVMSYLVSTPYRADLEQAIDPLDPALGLPWP--KDMSFTLSRRDTQAVGLAEARAKG 195
Query: 179 --FEYDGLPLLSLNMER 193
Y+ P + +R
Sbjct: 196 MLPRYEDCPAAAAAADR 212
>gi|302539098|ref|ZP_07291440.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. C]
gi|302447993|gb|EFL19809.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. C]
Length = 200
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + +TR F D RG F + YS + L + LG Q N S S G +RG+HF
Sbjct: 4 LSVQGAWLSETRAFADGRGEFQELYSGRALGDVLGYDPGVAQANRSVSRR-GVLRGVHFA 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G + D+ VDIR SPTY W ++ + +YI G H F+ L
Sbjct: 63 QMPPSQAKYVTCLSGAVLDVVVDIRVGSPTYRSWEAVRLDD-PHRSLYIEAGLGHAFLAL 121
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V+Y + Y+ + GV D ++ I WP + + P +SEKD+ P L++++
Sbjct: 122 TDDAVVVYLTSRGYAPGREHGVHPLDPALGIAWP--EDLEPVLSEKDRTAPGLDEME 176
>gi|297196533|ref|ZP_06913931.1| dTDP-4-deoxyglucose 3,5-epimerase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297153260|gb|EFH32244.1| dTDP-4-deoxyglucose 3,5-epimerase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 205
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + R D RG F + +G Q NHS S G +RG+HF
Sbjct: 19 LAVAGAYEFTPRVHRDERGLFVSPLQEEAFVAAVGRPFTVAQTNHSRS-ARGVMRGVHFT 77
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C GR D+ VDIR SPT+G W ++E+ + +Y+P G H F++L
Sbjct: 78 TTPPGQAKYVHCARGRAMDVVVDIRVGSPTFGAWDTVEMDTESFRAVYLPEGVGHAFLSL 137
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP- 178
E +T + Y V+ Y + + + D ++ + WP + ++S +D L + +
Sbjct: 138 EDDTVMSYLVSTPYRADLEQAIDPLDPALGLPWP--KDMSFTLSRRDTQAVGLAEARAKG 195
Query: 179 --FEYDGLP 185
Y+ P
Sbjct: 196 MLPRYEDCP 204
>gi|187923456|ref|YP_001895098.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phytofirmans
PsJN]
gi|187714650|gb|ACD15874.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia phytofirmans
PsJN]
Length = 183
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V++++ F D G+ +++S+ ++ VQD HS G +RGLH+Q
Sbjct: 10 LPEVKLIEPEVFCDEFGFCFESFSADEFIDDVSQAFQLVQDRHSR-AVRGVLRGLHYQ-V 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L+R + G +F +AVD+R NSP +G W +SA N QI+ P GFAHGF+ L
Sbjct: 68 QRPQGRLMRVVVGEVFAVAVDVRLNSPNFGKWCGAYLSAANYRQIWAPPGFAHGFVVLSN 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
E ++K T+++ E + + W+D I I WP+ P++ KD L + ++
Sbjct: 128 FAECLWKTTEYWFPELERCILWRDPDIGIEWPI--DFEPTLGAKDAAGRRLYEAEN 181
>gi|218528839|ref|YP_002419655.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
chloromethanicum CM4]
gi|218521142|gb|ACK81727.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methylobacterium
chloromethanicum CM4]
Length = 177
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + + D RG+F++T E GL F Q + SF+ GT+RG+HF +
Sbjct: 6 LALPSLFRVVPEPHADERGFFARTQCESEFAERGLVGHFTQSSVSFNHRRGTVRGMHFSK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+A+ KLVRC G I D +D+R +SPTY S+ +SA N +YIP G AHGF TL
Sbjct: 66 LPHAETKLVRCTGGAIHDAVIDLRPDSPTYLRTASVTLSAANRHALYIPAGLAHGFQTLS 125
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
+ E++Y + + GV W D + + WP T ++ +D P
Sbjct: 126 DDAEILYMIDRPFVASAADGVRWDDPAFGLAWPEPVT---VIAPRDLAFP 172
>gi|257469358|ref|ZP_05633452.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium ulcerans ATCC
49185]
Length = 180
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+K + F+D RG F +TY+ ++ L F + S S + IRG+HFQ P
Sbjct: 7 ELEGVFIIKNKIFQDERGIFIKTYNKDEFEKNNLYTEFRESYFSIS-NKDVIRGMHFQLP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ KLV G++ D+ VD+R+NS T G ++SLE+S NG +YIP G AHGF +LE
Sbjct: 66 PFEHEKLVYVAKGKVLDVIVDLRKNSKTLGKYISLELSEENGYSVYIPKGLAHGFKSLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ +IY V Y+ E D G+ W SI W T P +S +D+N +N +
Sbjct: 126 GSIMIYNVATVYNSESDYGIRWN--SIGFDW---RTEEPILSVRDKNFESMNDFLKKEVF 180
>gi|23015347|ref|ZP_00055126.1| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Magnetospirillum magnetotacticum MS-1]
Length = 171
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 3 INPVRILKT-RKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V ++ FED RG + +TY+ +L G+ FVQD+ S S +RG+H
Sbjct: 10 LDGVLLITPPTIFEDFRGHYIETYNRELYNAAGITVDFVQDDISVSQH-NVLRGIHGDG- 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLV C+ GR + V+ +SP Y W +S N Q+ IP F +G + L
Sbjct: 68 --GTWKLVSCLHGRFYLAVVNNDPDSPQYRKWTGFTLSDTNRHQVLIPPKFGNGHLVLSD 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
YK Y + W D + I WP D P +S +DQ L
Sbjct: 126 WAIFHYKQNSQYDRSSQFTILWNDPAYGIWWPRTD---PILSRRDQGL 170
>gi|73535427|pdb|1WLT|A Chain A, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
Homologue From Sulfolobus Tokodaii
gi|73535428|pdb|1WLT|B Chain B, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
Homologue From Sulfolobus Tokodaii
Length = 196
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ ++K + F D RG+F + + S+ ++ + +Q N SFS G +RGLH+QR P
Sbjct: 31 GIILIKPKVFPDKRGFFLEVFKSEDFTKMRIP-NVIQTNMSFSRK-GVVRGLHYQRTPKE 88
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q K++ GRI D+AVD+R++SPT+G +V E++ N ++IP GFAHGF LE +
Sbjct: 89 QGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIV 148
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + + YS H+ +++ I WP+ + +S+KD P L + +
Sbjct: 149 IYFITHNEYSPPHERCISYS----YIDWPIKE---VIISDKDLQCPSLEKAE 193
>gi|332530450|ref|ZP_08406393.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hylemonella gracilis ATCC
19624]
gi|332040110|gb|EGI76493.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Hylemonella gracilis ATCC
19624]
Length = 192
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 11/184 (5%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + ++ ++ R D RG F++ + + L+ G + Q NHS S G +RGLH+Q+
Sbjct: 10 LPLAGLKRVQRRLRADERGVFARLFCADELRPAGWRWPIAQINHSLSRGRGLVRGLHYQQ 69
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISAN----NGLQIYIPTGFAHGF 116
P+ +AKLV C+ G ++D+AVD+R SPT+ W + +S +G + IP GFAHGF
Sbjct: 70 APHQEAKLVSCVRGEVWDVAVDLRPGSPTFLRWHAERLSPQASDTHGSALLIPPGFAHGF 129
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN----LPFL 172
L E+IY + Y+ + + G+ QD + ITWPL +S +D P
Sbjct: 130 QVLSDEAELIYCHSAPYAPQSEHGLPVQDARLAITWPLPVQG---LSARDAGFAPIAPDF 186
Query: 173 NQID 176
++
Sbjct: 187 AGVE 190
>gi|91200296|emb|CAJ73341.1| strongly similar to dTDP-4-dehydrorhamnose 3,5-epimerase
[Candidatus Kuenenia stuttgartiensis]
Length = 183
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 94/151 (62%), Gaps = 4/151 (2%)
Query: 19 GWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFD 78
G+F++T+ K + GL VQ N S++ GT+RG+HFQ P+ +AKL+ CI G I+D
Sbjct: 24 GFFARTFCRKEFESHGLNPDLVQCNISYNKKKGTLRGMHFQIAPHEEAKLISCIKGSIYD 83
Query: 79 IAVDIRRNSPTYGCWVSLEISANNGLQI-YIPTGFAHGFMTLEMNTEVIYKVTDFYSVEH 137
+ +D+R +SPTYG W + +++A + Y+P FAHGF TLE +T V Y++++FY E
Sbjct: 84 VIIDMRSDSPTYGQWTAFKLTATVHFTMLYVPESFAHGFQTLEDDTLVFYQMSEFYHPES 143
Query: 138 DSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
G+ W D I WP+ +S+KD++
Sbjct: 144 ARGIRWDDPMFAIQWPIHSR---ILSDKDKS 171
>gi|317063604|ref|ZP_07928089.1| CDP-3,6-dideoxy-D-glycero-D-glycero-4-hexulose-5-epimerase
[Fusobacterium ulcerans ATCC 49185]
gi|313689280|gb|EFS26115.1| CDP-3,6-dideoxy-D-glycero-D-glycero-4-hexulose-5-epimerase
[Fusobacterium ulcerans ATCC 49185]
Length = 183
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+K + F+D RG F +TY+ ++ L F + S S + IRG+HFQ P
Sbjct: 10 ELEGVFIIKNKIFQDERGIFIKTYNKDEFEKNNLYTEFRESYFSIS-NKDVIRGMHFQLP 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ KLV G++ D+ VD+R+NS T G ++SLE+S NG +YIP G AHGF +LE
Sbjct: 69 PFEHEKLVYVAKGKVLDVIVDLRKNSKTLGKYISLELSEENGYSVYIPKGLAHGFKSLED 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ +IY V Y+ E D G+ W SI W T P +S +D+N +N +
Sbjct: 129 GSIMIYNVATVYNSESDYGIRWN--SIGFDW---RTEEPILSVRDKNFESMNDFLKKEVF 183
>gi|229578480|ref|YP_002836878.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
Y.G.57.14]
gi|229582928|ref|YP_002841327.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
Y.N.15.51]
gi|228009194|gb|ACP44956.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
Y.G.57.14]
gi|228013644|gb|ACP49405.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
Y.N.15.51]
Length = 178
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V ++K + F D+RG+F + + +++ + +Q N SFS G +RGLH+Q PP
Sbjct: 11 GVILIKPKAFPDNRGYFKEIFKESEFRKMNIPTP-LQANVSFS-KPGVVRGLHYQLPPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q K+V + GRI D+AVDIR+ S ++G +V E++ +N ++IP GFAHGF LE +T
Sbjct: 69 QGKIVTVMKGRIIDVAVDIRKKSKSFGKYVYAELNEDNHYMLWIPPGFAHGFQALEDSTV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + + YS H+ + + I WP+ VSEKD P L + +
Sbjct: 129 LYFVTHNEYSSYHERCINYT----MIDWPIK---SVIVSEKDAKCPPLERAE 173
>gi|148252624|ref|YP_001237209.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bradyrhizobium sp. BTAi1]
gi|146404797|gb|ABQ33303.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bradyrhizobium sp. BTAi1]
Length = 167
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 9 LKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKL 68
++ D RG F++T+ + + G++ VQ N S + GT+RG+HFQR P A AKL
Sbjct: 2 IELMPHGDRRGTFTRTWCASTFADHGIEFTPVQGNSSLTRKRGTVRGMHFQRAPKADAKL 61
Query: 69 VRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128
VRC +G I D+ VDIR S T G + E+S ++G +YIP GFAHGF TL ++ V Y
Sbjct: 62 VRCTSGCIHDVIVDIREGSSTRGEVYAYELSPSSGRMLYIPAGFAHGFQTLADDSVVEYL 121
Query: 129 VTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ Y E G D S I WP + +S+KD P
Sbjct: 122 MGIEYVAELSDGFRHDDPSFRIAWP---EAVSEMSDKDAAWPDFA 163
>gi|300743861|ref|ZP_07072881.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Rothia
dentocariosa M567]
gi|300380222|gb|EFJ76785.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Rothia
dentocariosa M567]
Length = 478
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
+I + ++ D+RGWF + + + ++ GL VQ+N SF+ GT RG+H +
Sbjct: 11 DIPGLLVIDLPVHGDNRGWFKENWQREKMRAAGLPDFDPVQNNISFNTSVGTTRGIHAE- 69
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K V +GRIF VD+R I++P G + F TL+
Sbjct: 70 ---PWDKYVSVASGRIFGAWVDLRAGESFGRVVTVELG---PDTAIFVPRGVGNAFQTLQ 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V D +S + + ++ D+S+ I WP+ D +SEKD+ P L++I
Sbjct: 124 ENTAYTYLVNDHWSADALTAYSFLNLADESVAIDWPI-DLAQAELSEKDRKHPRLHEI 180
>gi|296394659|ref|YP_003659543.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Segniliparus rotundus DSM
44985]
gi|296181806|gb|ADG98712.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Segniliparus rotundus DSM
44985]
Length = 199
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + D RG ++ + + L+E G Q N S S G +RG+H
Sbjct: 7 LPIAGAWEIIPELHPDDRGVNAELFRASALREATGRDFTTAQCNCSISKA-GVLRGVHLA 65
Query: 60 RPPYA-----QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAH 114
P Q K V +G FD+ VD+R SPT+G W ++ +S + + G H
Sbjct: 66 LSPDGALEGGQEKYVTATSGMAFDVVVDVRSGSPTFGAWEAVLLSGERRNAVLLSAGLGH 125
Query: 115 GFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSV----SEKDQNLP 170
+ LE +T + Y + Y + + D ++ I WP D+ ++ S++D+ P
Sbjct: 126 AVLALEDDTVLTYLCSQEYDPGRERALDALDPALAIAWPRTDSRGRTIDFLRSDRDRAAP 185
Query: 171 FLNQI 175
L Q
Sbjct: 186 SLAQA 190
>gi|16945709|dbj|BAB72040.1| AclL [Streptomyces galilaeus]
Length = 201
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHF 58
+ ++ + FED R F+ + +F Q NHS S GT+RG+H+
Sbjct: 6 LAVSGAFVFTPPVFEDDRDLFTSPFQEPAFVAALGHPLFPVAQSNHSRSRR-GTVRGIHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR DI VDIR SPTYG W S + +Y P G H F+
Sbjct: 65 TVTPPGVAKYVYCARGRAIDIVVDIRVGSPTYGRWDSSVLDPEGFRAMYFPVGVGHAFIA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE +T + Y ++ Y +H+ ++ D ++ + P+ + P +S +D P L Q+
Sbjct: 125 LEDDTVMSYMLSGSYEAQHEMSLSPLDPALGL--PIPQDVAPLLSARDTAAPLLEQV 179
>gi|120401240|ref|YP_951069.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium vanbaalenii
PYR-1]
gi|119954058|gb|ABM11063.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium vanbaalenii
PYR-1]
Length = 184
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQDVFVQDNHSFSFDCGTIRGLH 57
++ V +L F D RG F++T+ + L GL FVQD+ S S G IRG+H
Sbjct: 7 DLADVLVLTPTPFRDERGLFTRTFDAALFDAHLGTPGLSARFVQDSQSRSVR-GVIRGMH 65
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ +AKLVRC G I D+ VDIR S T+G + + N+ +Y+P GF HGF
Sbjct: 66 GR-SGRGEAKLVRCAHGAIHDVLVDIRPGSVTFGRQQAFLLDDNDFRHLYVPPGFLHGFQ 124
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
L +V Y++ + + VA D + I WPL VS +D+ P +
Sbjct: 125 ALTATADVCYRIDRPHDPSENLAVAHDDPDLAIDWPLAG---AIVSAQDRRAPRWADL 179
>gi|310778609|ref|YP_003966942.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ilyobacter polytropus DSM
2926]
gi|309747932|gb|ADO82594.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ilyobacter polytropus DSM
2926]
Length = 180
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ ED RG F++TY+ L K L+ F + +S S IRG+HFQ P
Sbjct: 7 EIKGLFIIEDFHVEDERGSFTKTYNRSLFKNNKLKGKFKESFYSVSKR-DVIRGMHFQLP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ Q K+V G+I D+ +D+R+ S TYG S+E+S +YIP G AHGF +LE
Sbjct: 66 PHDQDKMVYVTRGKIIDVILDLRKKSKTYGQVFSIELSEEKRNSLYIPKGCAHGFKSLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPF 179
++ V+Y VT +S E DSG+ W S W T +P +SEKD+NL ++ +PF
Sbjct: 126 DSTVVYDVTTVHSPESDSGIRWD--SFGYDW---KTNIPLMSEKDKNLMEFSEFKKKNPF 180
>gi|212550817|ref|YP_002309134.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549055|dbj|BAG83723.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 182
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 60/174 (34%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + +++ + D RG+F +TY + + FVQ++ S S G +RG+H+Q+
Sbjct: 8 IWGLWLIRPKLIFDERGYFMETYMKEEFERRVGTIDFVQESQSCSVC-GVLRGMHYQQGE 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
AQAKL+ + G I D+ VD+R++S ++G + ++E+SA N LQ +IP GFAHGF+ L
Sbjct: 67 AAQAKLINVLEGTIQDVVVDLRKDSNSFGKYETVELSAENKLQFFIPRGFAHGFLVLSEW 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ YKV + Y + + + DK ++I W L SEKD+ L +I+
Sbjct: 127 ATINYKVDNVYCPDAERILYAGDKDVNILW-DKRCELWKQSEKDRLGSSLREIE 179
>gi|254392191|ref|ZP_05007378.1| epimerase [Streptomyces clavuligerus ATCC 27064]
gi|294816487|ref|ZP_06775130.1| epimerase [Streptomyces clavuligerus ATCC 27064]
gi|326444811|ref|ZP_08219545.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces clavuligerus
ATCC 27064]
gi|197705865|gb|EDY51677.1| epimerase [Streptomyces clavuligerus ATCC 27064]
gi|294329086|gb|EFG10729.1| epimerase [Streptomyces clavuligerus ATCC 27064]
Length = 213
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 60/174 (34%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + D RG+F +T+ + L + +GL FVQD+ S S G +RGLH +
Sbjct: 9 ITGAYLFEPTPRADERGFFCRTFDAGLARSVGLDPHAFVQDSVSRSAR-GVLRGLHLR-S 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+AKLVRC G+IFD+ +D+R +SPTY + E+S +YIP G AHGF L
Sbjct: 67 GAGEAKLVRCSFGKIFDVVIDLRPDSPTYRTVATFELSGETQTTLYIPAGCAHGFQALTG 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ Y++ + D +A+ D + I WPL T +S +D+ P L ++
Sbjct: 127 TADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPVT---LMSRRDREAPSLAEV 177
>gi|4218557|emb|CAA09646.1| putative dTDP-4-keto-6-deoxyglucose-2,3-dehydratase [Streptomyces
violaceoruber]
Length = 195
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ ++ R++ D RG F ++ + L+ E G Q N+S S T+RG+H
Sbjct: 8 EVPGAYVITPRQWPDPRGTFFESLRTDLVSEAVGRPFEVRQINYSTS-RRNTLRGVHGVL 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAK V C+ G + D+ VD+R SPT+G S ++ NG+ +++ G HGF+ L
Sbjct: 67 IPPGQAKYVTCVRGALRDMVVDLRVGSPTFGQSASTLLTPENGVAVHVAEGLGHGFLALT 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+T + Y ++ + + D + + W + P +S KD P L
Sbjct: 127 DDTCISYALSTAHVPGTQFEIDPLDPDLALPWGFDEP--PLLSAKDAGAPSLR 177
>gi|311113106|ref|YP_003984328.1| dTDP-4-dehydrorhamnose reductase [Rothia dentocariosa ATCC 17931]
gi|310944600|gb|ADP40894.1| dTDP-4-dehydrorhamnose reductase [Rothia dentocariosa ATCC 17931]
Length = 478
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
+I + ++ D+RGWF + + + ++ GL VQ+N SF+ GT RG+H +
Sbjct: 11 DIPGLLVIDLPVHGDNRGWFKENWQREKMRAAGLPDFDPVQNNISFNTSVGTTRGIHAE- 69
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K V +GRIF VD+R I++P G + F TLE
Sbjct: 70 ---PWDKYVSVASGRIFGAWVDLRAGESFGRVVTVELG---PDTAIFVPRGVGNAFQTLE 123
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V D +S + + ++ D+S I WP+ D +SEKD+ P L++I
Sbjct: 124 ENTAYTYLVNDHWSADALTAYSFLNLADESTAIDWPI-DLAQAELSEKDRKHPRLHEI 180
>gi|297569781|ref|YP_003691125.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurivibrio alkaliphilus
AHT2]
gi|296925696|gb|ADH86506.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfurivibrio alkaliphilus
AHT2]
Length = 346
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 74/151 (49%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
Query: 26 SSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIR 84
+ K+ + GL+ FVQDNHS S G +RGLH+Q PP AQ KLVR + G +FD+AVDIR
Sbjct: 196 NEKIFQAATGLRPNFVQDNHSKSQK-GVLRGLHYQLPPKAQGKLVRVVQGEVFDVAVDIR 254
Query: 85 RNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQ 144
NSPT+G WV +SA+N Q++IP GFAHG +TL E +YK TDFY+ EH+ +AW
Sbjct: 255 HNSPTFGRWVGQRLSADNKRQLWIPEGFAHGVLTLTPTAEFLYKTTDFYAPEHERCIAWN 314
Query: 145 DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
D I I W D P +S KD+ L
Sbjct: 315 DPDIGIDWGYED--APLLSAKDRECVPLRNA 343
>gi|296126188|ref|YP_003633440.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira murdochii DSM
12563]
gi|296018004|gb|ADG71241.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira murdochii DSM
12563]
Length = 177
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I IL+ ED RG+F + + +K L++ L +Q N +++ GT+RG+H+Q+ P
Sbjct: 8 IEGSYILQNNYIEDERGYFLRMFDNKELEKYNLNFNLIQSNINYNKKVGTLRGMHYQKYP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Y + K+VRC+ G+IFD+ DIR++SPTYG + S+E+S NG +YIP AHGF TLE +
Sbjct: 68 YPEIKIVRCLKGKIFDVIADIRKDSPTYGKYSSIELSEENGKMVYIPPYVAHGFQTLEDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
T V Y ++ ++ + + W D + +I WP + ++EKD+N+P
Sbjct: 128 TIVAYFLSTYFVPDAYGYLRWNDLAFNIKWPECENR--IMNEKDKNIPDF 175
>gi|123443293|ref|YP_001007267.1| putative epimerase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122090254|emb|CAL13120.1| putative epimerase [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 174
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI+ ++++ F D RG F +T+ ++ K GL+ ++ +S S IRG+HFQ+
Sbjct: 8 LNISGCYLIESPIFSDERGEFVKTHHQEIFKNFGLEIPSAEEYYSRS-KNNVIRGMHFQQ 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P KLV C G + D+ +DIR++S TYG ++S ++ +N I++ G AHGF++++
Sbjct: 67 YPDDHNKLVFCPEGEVLDVFLDIRKDSNTYGQFMSFILNPHNRRSIFLAKGIAHGFLSMK 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
NT ++ K + +S DSG+ W S WP+ + P +S+KD+NL
Sbjct: 127 DNTLIVCKTSTVHSPSRDSGIHWN--SFGFKWPVEN---PIISDKDRNL 170
>gi|78486027|ref|YP_391952.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thiomicrospira crunogena
XCL-2]
gi|78364313|gb|ABB42278.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thiomicrospira crunogena
XCL-2]
Length = 175
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V ++ + FED RG F +T+ ++ + GL+ F + +S S +RG+HFQ PP
Sbjct: 8 IDGVFEIENKVFEDFRGKFVKTFHEEVFRSHGLESNFKESFYSVS-GKNVLRGMHFQLPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ AKLV +G I D+AVDIR S T+G + + ++SA N +Y+ GFAHGF+TL
Sbjct: 67 HDHAKLVYVTSGEILDVAVDIREESSTFGKYFATKLSAKNAKSLYMDKGFAHGFLTLSDF 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
V Y T ++ E+D+G+ W S W P VSE+D+ L +L
Sbjct: 127 ASVTYLTTSVHASEYDTGIHWN--SFGFDW--EGVEKPIVSERDKALEYL 172
>gi|118469656|ref|YP_890202.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium smegmatis str.
MC2 155]
gi|118170943|gb|ABK71839.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium smegmatis str.
MC2 155]
Length = 184
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQDVFVQDNHSFSFDCGTIRGLH 57
++ V +L F D RG F++T+ + + + G+ FVQD+ S S G +RG+H
Sbjct: 7 DLADVLVLVPEPFRDERGLFTRTFDAHIFDDHLGRPGVSASFVQDSQSRSSQ-GVVRGMH 65
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ +AKLVRC G + D+ VDIR +SPT+G + + + +Y+P GF HGF
Sbjct: 66 GR-SERGEAKLVRCAHGAVHDVLVDIRPDSPTFGRQQAFLLDDKDFRHLYVPPGFLHGFQ 124
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
L +V Y++ + D VA+ D + I WPL T+ VS +D + +
Sbjct: 125 ALTAIADVCYRIDRPHDPSEDLAVAYNDPDLGIDWPLPVTM---VSPRDAGAGSWSDL 179
>gi|315445634|ref|YP_004078513.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1]
gi|315263937|gb|ADU00679.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1]
Length = 451
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + +++ D+RGWF + + + + GL D VQ+N SF+ GT RG H +
Sbjct: 19 IPGLLVVELPVHGDNRGWFKENWQREKMVTAGLPDFGPVQNNISFNDAIGTTRGFHAE-- 76
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLV AGRIF VD+R S S + +++P G + F TLE
Sbjct: 77 --PWDKLVSVAAGRIFGAWVDLRSGSTY---GTSFTAELDASRAVFVPRGVGNAFQTLES 131
Query: 122 NTEVIYKVTDFYSVEHDS-GVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
NT Y V D YS + V D + I WP+ +S KD+ P L+++D
Sbjct: 132 NTAYTYLVNDHYSPDAAYVSVNLADPQVGIEWPIP-LARAELSGKDRANPRLSEVD 186
>gi|15922286|ref|NP_377955.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus tokodaii str. 7]
gi|118137319|pdb|2B9U|A Chain A, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137320|pdb|2B9U|C Chain C, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137321|pdb|2B9U|D Chain D, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137322|pdb|2B9U|B Chain B, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137323|pdb|2B9U|E Chain E, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137324|pdb|2B9U|F Chain F, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137325|pdb|2B9U|G Chain G, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137326|pdb|2B9U|H Chain H, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137327|pdb|2B9U|I Chain I, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137328|pdb|2B9U|J Chain J, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137329|pdb|2B9U|K Chain K, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|118137330|pdb|2B9U|L Chain L, Crystal Structure Of Dtdp-4-Dehydrorhamnose 3,5-Epimerase
From Sulfolobus Tokodaii
gi|15623075|dbj|BAB67064.1| 176aa long hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
[Sulfolobus tokodaii str. 7]
Length = 176
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ ++K + F D RG+F + + S+ ++ + +Q N SFS G +RGLH+QR P
Sbjct: 11 GIILIKPKVFPDKRGFFLEVFKSEDFTKMRIP-NVIQTNMSFSRK-GVVRGLHYQRTPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q K++ GRI D+AVD+R++SPT+G +V E++ N ++IP GFAHGF LE +
Sbjct: 69 QGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + + YS H+ +++ I WP+ + +S+KD P L + +
Sbjct: 129 IYFITHNEYSPPHERCISYS----YIDWPIKE---VIISDKDLQCPSLEKAE 173
>gi|311742181|ref|ZP_07715991.1| dTDP-4-dehydrorhamnose reductase [Aeromicrobium marinum DSM 15272]
gi|311314674|gb|EFQ84581.1| dTDP-4-dehydrorhamnose reductase [Aeromicrobium marinum DSM 15272]
Length = 468
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ D+RGWF + + + ++ LGL + +Q N SF+ GT RG+H +
Sbjct: 15 IPGMMLIDLPVHGDNRGWFKENWHLRKMRSLGLTEFGPIQSNVSFNHAVGTTRGIHAE-- 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + GR+F VD+R + + + +++P G + + +LE
Sbjct: 73 --PWDKFISVATGRVFAAWVDLREGDSFGQVFTTEL---DPSTAVFVPRGVGNSYQSLEQ 127
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE 180
+T IY V D +S + + D+++ I WP+ +S++D+ P L ++ PF+
Sbjct: 128 DTAYIYLVNDHWSPDASYTFLNLADETVAIDWPIP-LDQAELSDRDRTHPRLADVE-PFK 185
>gi|297569786|ref|YP_003691130.1| glucose-1-phosphate thymidylyltransferase [Desulfurivibrio
alkaliphilus AHT2]
gi|296925701|gb|ADH86511.1| glucose-1-phosphate thymidylyltransferase [Desulfurivibrio
alkaliphilus AHT2]
Length = 401
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/152 (48%), Positives = 96/152 (63%), Gaps = 4/152 (2%)
Query: 26 SSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIR 84
+ K+ + GL+ FVQDNHS S G +RGLH+Q PP AQ KLVR + G +FD+AVDIR
Sbjct: 251 NEKIFQAATGLRPNFVQDNHSKSQK-GVLRGLHYQLPPKAQGKLVRVVQGEVFDVAVDIR 309
Query: 85 RNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQ 144
NSPT+G WV +SA+N Q++IP GFAHG +TL E +YK TDFY+ EH+ +AW
Sbjct: 310 HNSPTFGRWVGQRLSADNKRQLWIPEGFAHGVLTLTPTAEFLYKTTDFYAPEHERCIAWN 369
Query: 145 DKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
D I I W D P +S KD+ L +
Sbjct: 370 DPDIGIDWGYEDP--PLLSTKDRECVPLCNAE 399
>gi|119961083|ref|YP_948860.1| dTDP-4-keto-L-rhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Arthrobacter aurescens TC1]
gi|119947942|gb|ABM06853.1| dTDP-4-keto-L-rhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Arthrobacter aurescens TC1]
Length = 477
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + D+RGWF + + + + L L VQ+N SF+ GT RG+H +
Sbjct: 16 IPGVVLFDLPVHGDNRGWFKENWQREKMLALALPDFKPVQNNVSFNEKVGTTRGIHAE-- 73
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + +G+IF VD+R+ + + I+IP G + F TLE
Sbjct: 74 --PWDKFISVASGKIFGAWVDLRQGP---TFGNVFTATMDPSQAIFIPRGVGNAFQTLED 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V D +S + ++ D++ I WP+ +S+KD+ P L+++
Sbjct: 129 NTAYTYLVNDHWSADAQGQYSFLNLADETAAIDWPIP-LSAAELSDKDKAHPRLSEV 184
>gi|1197642|gb|AAC60763.1| WbcA [Yersinia enterocolitica (type O:8)]
Length = 174
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NI+ ++++ F D RG F +T+ ++ K GL+ ++ +S S IRG+HFQ+
Sbjct: 8 LNISGCYLIESPIFSDERGEFVKTHHQEIFKNFGLEIPSAEEYYSRS-KNNVIRGMHFQQ 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P KLV C G + D+ +DIR++S TYG ++S + +N I++ G AHGF++++
Sbjct: 67 YPDDHNKLVFCPEGEVLDVFLDIRKDSNTYGQFMSFISNPHNRRSIFLAKGIAHGFLSMK 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
NT ++ K + +S DSG+ W S WP+ + P +S+KD+NL
Sbjct: 127 DNTLIVCKTSTVHSPSRDSGIHWN--SFGFKWPVEN---PIISDKDRNL 170
>gi|227121334|gb|ACP19366.1| SaqZ1 [Micromonospora sp. Tu 6368]
Length = 199
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V ++ +F D RG F +++ +E G+ V Q N+S S T+RG+H
Sbjct: 8 LPGVFRMEVNQFRDVRGSFFESFRVDAFEEATGVPFVPRQINYSVS-RRNTLRGIHSVAL 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QAK V C+ G + D AVD+R SPT+G + S + A +G +Y+P G HGF+ L+
Sbjct: 67 PPGQAKFVSCVRGALRDFAVDLRVGSPTFGQYESNLLEAGSGRCVYLPEGVGHGFLALQD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++ + Y ++ + V D + I W + P +S+ D + L
Sbjct: 127 DSSICYVLSTTFVPGTQINVDPLDPELAIPWGFEEP--PLMSDADLSAMSLADA 178
>gi|214003857|gb|ACJ60977.1| VEG35 [uncultured soil bacterium]
Length = 202
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF--VQDNHSFSFDCGTIRGLHF 58
+ + R F D RG F Y E +F Q NHS S G +RG+H+
Sbjct: 6 LAVEGAIEFTPRVFPDDRGAFLSPYQEAAFVEAHGSPLFRVAQTNHSVSKR-GVVRGVHY 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C G+ DI +DIR SPT+G W S+ + + +Y P G H F+
Sbjct: 65 TATPPGVAKYVYCARGKALDIVIDIRVGSPTFGQWDSVLMDQQDHRALYFPVGVGHAFIA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL-DTILPSVSEKDQNLPFLNQI 175
LE +T + Y ++ Y + ++ D ++ + P+ + P +S++D+ L +
Sbjct: 125 LEDDTVMSYMISGTYVARDELALSPLDPALGL--PIETSGVEPILSDRDKVAVTLAEA 180
>gi|2326951|gb|AAB66649.1| RmlC [Mycobacterium tuberculosis]
Length = 203
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + DSRG F + + + G Q N S S G +RGLHF
Sbjct: 8 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVS-SAGVLRGLHFA 66
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ P +QAK V C++G +FD+ VDIR SPT+G W S+ + + IY+ G AHGF+ L
Sbjct: 67 QLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQD-RNIYVSDGLAHGFLAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ N+ V+Y + Y+ + + D ++ D PS+S++D P +
Sbjct: 126 QDNSTVMYLCSAEYNPQRQHTICATDPTLASIRRWSDGGCPSLSDRDAAAPSFEE 180
>gi|329944296|ref|ZP_08292555.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328531026|gb|EGF57882.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 193
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL D VQ+N SF+ + G RG+H +
Sbjct: 17 IPGFLRIDLTVHGDNRGWFKENWQREKMLALGLPDFGPVQNNISFNNEVGVTRGIHAE-- 74
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + + + +++P G + + TLE
Sbjct: 75 --PWDKFVSVATGRVFGAWVDLREGPSFGTVYTCEI---DPSVAVFVPRGVGNAYQTLEP 129
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V D +S + + D++ +++WP+ +S+KD+ P L + +PF
Sbjct: 130 NTAYTYLVNDHWSPDAQYTFLNLADETANVSWPIP-LAEAILSDKDKAHPRLADV-APF 186
>gi|148272192|ref|YP_001221753.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147830122|emb|CAN01051.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 201
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + + D RG F + Y L+ +G + Q N S S G +RG+HF
Sbjct: 6 LAVPDGYEITPVQRADDRGVFLEWYRFDELERVVGHRLDLRQANMSVS-KRGVVRGVHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V+ ++G + D +DIR SPT+G W S+ + +YI G H F+ L
Sbjct: 65 DVPRGQAKYVKAVSGAVLDFVIDIRVGSPTFGQWDSVRLDTETHKAVYISEGLGHCFVAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ V Y V+D Y+ + G+ D + + +P + +S KD P L
Sbjct: 125 TDDAAVTYLVSDVYNPGAEHGITPLDPELGLVFP-EEAGEALLSPKDLEAPTL 176
>gi|229815501|ref|ZP_04445831.1| hypothetical protein COLINT_02551 [Collinsella intestinalis DSM
13280]
gi|229808921|gb|EEP44693.1| hypothetical protein COLINT_02551 [Collinsella intestinalis DSM
13280]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + DSRGWF + + + ++ LGL D+ VQ+N SF+ G RG+H +
Sbjct: 25 NIPGMLVFDLPVHGDSRGWFKENWQREKMRALGLPDMGPVQNNISFNDRKGVTRGIHAE- 83
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + GR+F VD+R S + + IY+P G + + LE
Sbjct: 84 ---PWDKFISVACGRVFGAWVDLRPGSSFGQVYTCEL---DPSRAIYVPRGVGNSYQALE 137
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S E S V D + I WP+ + +SE D+ P L
Sbjct: 138 DGTAYTYLVNAHWSAELKSTYTFVNLADPDLGIEWPIPLSEC-ELSEADKAHPALADA 194
>gi|183602162|ref|ZP_02963530.1| possible fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683072|ref|YP_002469455.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium animalis subsp.
lactis AD011]
gi|241191394|ref|YP_002968788.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196800|ref|YP_002970355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|183218655|gb|EDT89298.1| possible fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
[Bifidobacterium animalis subsp. lactis HN019]
gi|219620722|gb|ACL28879.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium animalis subsp.
lactis AD011]
gi|240249786|gb|ACS46726.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251354|gb|ACS48293.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|289177519|gb|ADC84765.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis
subsp. lactis BB-12]
gi|295794387|gb|ADG33922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis
subsp. lactis V9]
Length = 483
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF--VQDNHSFSFDCGTIRGLHFQ 59
NI + + D+RGWF + + + LGL F VQ+N SF+ G RG+H +
Sbjct: 13 NIPGLLVFDLPVHGDNRGWFKENWQKAKMTALGLPKDFQPVQNNVSFNAKRGVTRGIHAE 72
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
K + G IF VD+R + + + IY+P G + F L
Sbjct: 73 ----PWDKFISLATGEIFGAWVDLRPGDTFGQVYTTRL---DPSKAIYVPRGVGNSFQAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E T Y V +S+E V D ++I WP+ +SE D + P L
Sbjct: 126 EDGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEQAELSEADLHHPMLKDAK 184
>gi|227505632|ref|ZP_03935681.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
striatum ATCC 6940]
gi|227197785|gb|EEI77833.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
striatum ATCC 6940]
Length = 447
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + IL+ D+RGWF + + + + GL VQ+N SF+ G RGLH +
Sbjct: 8 IEGLLILELDVHSDNRGWFKENWQRAKMLDAGLPDFQPVQNNVSFNAARGVTRGLHAE-- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLV G++F D+R SPTYG V+ EI +++P G A+GF LE
Sbjct: 66 --PWDKLVSIAHGKVFGAWCDVREGSPTYGELVTHEIGPET--AVFVPWGVANGFQALEE 121
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D +S + + D + WPL T +S+KD+ P L +
Sbjct: 122 TA-YSYLVNDHWSPDAEYTFVNLD---MVDWPLEPTE---ISDKDRAHPRLADV 168
>gi|325067633|ref|ZP_08126306.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose
3,5-epimerase [Actinomyces oris K20]
Length = 193
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL D VQ+N SF+ + G RG+H +
Sbjct: 17 IPGFLRIDLTVHGDNRGWFKENWQREKMLALGLPDFGPVQNNISFNNEVGVTRGIHAE-- 74
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + + + +++P G + + TLE
Sbjct: 75 --PWDKFVSVATGRVFGAWVDLREGPSFGAVYTCEI---DPSVAVFVPRGVGNSYQTLEP 129
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T Y V D +S + + D+++++ WP+ +S+KD+ P L ++ +PF
Sbjct: 130 DTAYTYLVNDHWSADAQYTFLNLADETVNVPWPIA-LSEAILSDKDKAHPRLAEV-TPF 186
>gi|260836799|ref|XP_002613393.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae]
gi|229298778|gb|EEN69402.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae]
Length = 493
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + +L+ + D RG + Y+ G+ + Q S S+ +RGLH
Sbjct: 9 LAVRDAYLLEFARHSDRRGHLEELYNETRYPS-GVTQHWAQVTCSTSYR-NVLRGLHCST 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLV C+AGRI+D+ VD+R+ SPTY W + +S NN Q+YIP HGF TL
Sbjct: 67 YG----KLVTCVAGRIYDVVVDLRKTSPTYLRWSAAILSDNNRRQMYIPPNCGHGFYTLG 122
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
V+Y Y + + W D +++ WPL + P +S+KD++ P L++
Sbjct: 123 DRNTVVYCQGGVYQPATERDLLWFDPFVNVYWPLETSQPPVLSDKDRSAPCLDE 176
>gi|166363833|ref|YP_001656106.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microcystis aeruginosa
NIES-843]
gi|166086206|dbj|BAG00914.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Microcystis aeruginosa
NIES-843]
Length = 180
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 6/179 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ED RG F +T + K L F ++ +S S +RGLHFQ PP
Sbjct: 8 IPKCYEIVPTILEDKRGRFVKTLHQDIYKSHQLIINFAEEYYSVSKK-NVLRGLHFQVPP 66
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K+V C+ G + D+ VD+R+ SPTYG + +S+ NG IYIP+G AHGF
Sbjct: 67 QDCTKIVYCLEGSVMDVVVDLRKGSPTYGEFELFNLSSENGKIIYIPSGLAHGFYVTSET 126
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+ YKV+ YS + D+G+ W S+ I WP + P +SE+DQ+ ++ SP Y
Sbjct: 127 AIMCYKVSTVYSPKEDTGILWN--SVVIPWP---NLHPILSERDQSFLPFSEFRSPLVY 180
>gi|284028522|ref|YP_003378453.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Kribbella flavida DSM 17836]
gi|283807815|gb|ADB29654.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Kribbella flavida DSM 17836]
Length = 186
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQR 60
+I + ++ F+D RGWF +++ ++ L++LGL VQ+N S++ + G RG+H +
Sbjct: 10 SIPGLLHVELEVFDDGRGWFKESFQAEKLEKLGLPHLEVVQNNVSYNAEVGVTRGIHAE- 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + GR+F VD+R G +Y+P G + F TLE
Sbjct: 69 ---PWDKYISPAFGRVFTAIVDLREGP---GFGRLETFELTPRQGLYVPRGCGNSFCTLE 122
Query: 121 MNTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
NT Y V +S + V D I++ WPL L SEKD P L+
Sbjct: 123 PNTVYNYLVNAHWSPDAKYTLVNLFDPRINVPWPLPKEQL-IYSEKDAGHPLLD 175
>gi|2916806|emb|CAA12011.1| SnogF [Streptomyces nogalater]
Length = 201
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHFQRP 61
R F D+RG F + + E +F Q NHS S G +RG HF
Sbjct: 9 EGAHAFTPRVFPDARGCFVSPFQQTPVAEALGHRLFPVAQTNHSRSRR-GVVRGAHFTLT 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AK V C GR D +DIR SPT+G W S+ + N +Y P G AH F LE
Sbjct: 68 PPGIAKYVYCARGRARDYVIDIRVGSPTFGQWDSVVLDDRNFRAMYFPVGVAHAFAALED 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
+T + Y ++ Y +++ ++ D + + P +SE+D P L +++S
Sbjct: 128 DTVMSYMLSGEYVADNELALSVFDPDLALELP--GDTPLLLSERDTAAPTLRELES 181
>gi|260061272|ref|YP_003194352.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Robiginitalea biformata
HTCC2501]
gi|88785404|gb|EAR16573.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Robiginitalea biformata
HTCC2501]
Length = 154
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 61/156 (39%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 22 SQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA 80
++Y+ ++ LGL FVQDNHS S +RGLH+Q+ +AQAKLVR + GR+ DI
Sbjct: 1 MESYNKAKFEKNLGLSVDFVQDNHSVSSR-NVLRGLHYQKGQWAQAKLVRVVRGRVRDIV 59
Query: 81 VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSG 140
VD+R +SPT+G V++E+S++N ++IP G AHGF++LE +T YK +Y+ + ++G
Sbjct: 60 VDLRTDSPTFGRHVAVELSSDNSRMLWIPKGLAHGFLSLEDDTTFCYKCDAYYNPKAEAG 119
Query: 141 VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + D +D+ W + ++ + +S +D+ LPF +
Sbjct: 120 IRFNDPDLDLDWGVPESEI-KLSPRDRALPFFRMLK 154
>gi|237748304|ref|ZP_04578784.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
OXCC13]
gi|229379666|gb|EEO29757.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
OXCC13]
Length = 182
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I+ F DS G+ + ++ + K L FV + S + GLH+Q P
Sbjct: 8 IREVKIVNPDVFHDSNGFLIEDFNLETFGKALDHAVEFVDERLIHSGRHELM-GLHYQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+AQ KLV G+ F +AVD+R++SP +G W+ +S N ++ ++P GF HGF+TL
Sbjct: 67 PHAQEKLVHVTNGQTFQVAVDLRKSSPDFGKWIGTVVSDENRIRFWVPEGFGHGFVTLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++ VT + E + + W D +++I W I P VS KD L +
Sbjct: 127 FADIAIGVTKAFDKESERCIRWDDPALEIDW--HGIIAPRVSLKDLEGKLLYEA 178
>gi|119962499|ref|YP_947906.1| dTDP-4-keto-L-rhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Arthrobacter aurescens TC1]
gi|119949358|gb|ABM08269.1| dTDP-4-keto-L-rhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Arthrobacter aurescens TC1]
Length = 469
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + + + D RGWF + + ++++GL D VQ+N SF+ GTIRG H +
Sbjct: 14 IPGLLLFELAVHGDERGWFKENWHRAKMRDIGLPDFGPVQNNISFNAARGTIRGFHAE-- 71
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V +GRIF VD+R + + +++P G + F TLE
Sbjct: 72 --PWDKFVSLASGRIFGAWVDLREGPTFGTSFCAEL---TAHDAVFVPRGVGNAFQTLED 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+T Y V D +S E + D+ + + WP+ +S +D+ P L +
Sbjct: 127 DTAYTYLVNDHWSAEAQRDYTFLNLADEHVAVPWPIP-LKSAILSPQDKKHPRLADV 182
>gi|213962263|ref|ZP_03390526.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sputigena
Capno]
gi|213954929|gb|EEB66248.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Capnocytophaga sputigena
Capno]
Length = 181
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 8/180 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ D RG F +T+++ L + G+ + +S S IRG+HFQ P
Sbjct: 8 SIEGVYIIENFNAFDDRGLFVKTFNTDFLNQKGIDFQINESYYSISNK-NVIRGMHFQLP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P KLV I+G + D+ +D+R+ S TY ++S+E+S N +YIP G AHGF +LE
Sbjct: 67 PDDHQKLVYVISGSVIDVVLDLRKESKTYKQYISIELSDKNHKSVYIPKGLAHGFKSLEN 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPF 179
NT ++Y V Y+ D+G+ + S W L P +S +D + P L+ +PF
Sbjct: 127 NTIMMYNVGTTYNPTSDAGIHYN--SFGFNWDLEK---PILSTRDLSFPTLDDFSTINPF 181
>gi|257077381|ref|ZP_05571742.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ferroplasma acidarmanus fer1]
Length = 199
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+++ ++KF+D+RG+F + Y K+L++ +Q+ F Q N SFS RG HFQ P
Sbjct: 31 IKDVKLVNSKKFDDNRGFFEEVYREKILEDFNIQNKFSQVNLSFS-KKNVFRGFHFQLNP 89
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q KL+ I+G+I D +D+R++S ++ C V EI++ IYIP GFAHGF+ LE
Sbjct: 90 ELQGKLITVISGKIIDYGIDLRKDSKSFKCHVEYEITSGKM--IYIPEGFAHGFLALED- 146
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ V+Y T+ ++ DSG+ + DK ++I+ P +SEKD+ L LN++ F
Sbjct: 147 SYVLYLTTNEFNQSLDSGIRYDDKELNISLP----DNIIISEKDKKLKHLNELALDF 199
>gi|326402816|ref|YP_004282897.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
gi|325049677|dbj|BAJ80015.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium multivorum
AIU301]
Length = 183
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 16 DSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGR 75
D+RG F + + S+ L L Q N S + GT+RGLHFQ PP+A+ KL+RC+ GR
Sbjct: 21 DARGAFQRCFCSRDLAPLLGTREIAQINRSLTARSGTVRGLHFQFPPHAEMKLIRCLRGR 80
Query: 76 IFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSV 135
++D+AVD+R SP W + E+SA NG + IP G AHGF LE ++E++Y T Y+
Sbjct: 81 VWDVAVDLRAGSPQLLRWHAEELSAANGRMLVIPEGVAHGFQALENDSELLYIHTAHYAH 140
Query: 136 EHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ GV D + I WP++ +S++D+ LP L
Sbjct: 141 AAEGGVRCDDPQLGIDWPMMVGG---LSDRDRALPML 174
>gi|148259609|ref|YP_001233736.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium cryptum JF-5]
gi|146401290|gb|ABQ29817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Acidiphilium cryptum JF-5]
Length = 183
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 16 DSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGR 75
D+RG F + + S+ L L Q N S + GT+RGLHFQ PP+A+ KL+RC+ GR
Sbjct: 21 DARGAFQRCFCSRDLAPLLGTREIAQINRSLTARSGTVRGLHFQFPPHAEMKLIRCLRGR 80
Query: 76 IFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSV 135
++D+AVD+R SP W + E+SA NG + IP G AHGF LE ++E++Y T Y+
Sbjct: 81 VWDVAVDLRAGSPQLLRWHAEELSAANGRMLVIPEGVAHGFQALENDSELLYIHTAHYAH 140
Query: 136 EHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ GV D + I WP++ +S++D+ LP L
Sbjct: 141 AAEGGVRCDDPQLGIDWPMMVGG---LSDRDRALPML 174
>gi|229584466|ref|YP_002842967.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
M.16.27]
gi|228019515|gb|ACP54922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
M.16.27]
Length = 176
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ ++K + F D RG+F + + S+ + + VQ N SFS G +RGLH+Q P
Sbjct: 11 GIVLIKPKVFPDKRGFFLEVFKSEDFTKAEIP-NIVQVNMSFS-LKGVVRGLHYQITPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLV G+I D+AVD+R++SPT+G +V +E++ N ++IP GFAHGF LE +
Sbjct: 69 QGKLVFVPKGKILDVAVDLRKSSPTFGKYVKVELNDENHYILWIPPGFAHGFQALEDSIV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V + + YS H+ V + + WP+ + +S+KD P L + +
Sbjct: 129 VYFLTHNEYSKSHERCVNYS----YVDWPIKE---FIISDKDLQCPPLEKAE 173
>gi|315937139|gb|ADU56146.1| hypothetical protein CA915-25 [uncultured organism CA915]
Length = 200
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFD-CGTIRGLHFQRP 61
I+ + + DSRG F+ Y E + +F + S + G +RG+H+
Sbjct: 8 IDGAFRFEPTVYPDSRGLFASPYQDPAFAEALGRPLFPVRDVSHNRSARGVLRGIHYTAV 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P +AK V C G + D +D+R SPTYG W + E+S +N +YIP G H F++L
Sbjct: 68 PPGRAKYVYCPYGEVRDYLIDLRLGSPTYGRWEATELSGDNCRALYIPVGVGHAFLSLRD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
++ V+Y +++ Y ++ V+ D I ++ P + S++D+ P L +
Sbjct: 128 DSVVVYLMSEGYVPANELAVSALDPEIGLSLP--QGVAIQQSDRDRGAPTLAEA 179
>gi|308445205|gb|ADO32779.1| dTDP-2,3,6-D-glycero-4-hexulose 5-epimerase [Streptomyces
vietnamensis]
Length = 203
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ ++ D RG F ++ + L+ + +G Q N+S S T+RG+H P
Sbjct: 10 PGSYVITPHQWPDPRGTFFESLRTDLVGEAVGRPFEVRQINYSTS-RRNTLRGIHGVLIP 68
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
QAK V C+ G + D+ VD+R SPT+G S ++ NG+ +++ G HGF+ L +
Sbjct: 69 PGQAKYVTCVRGALRDMVVDLRVGSPTFGQSASTLLTPENGMAVHVTEGLGHGFLALTDD 128
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
T + Y ++ + + D + + W P +SEKD P L
Sbjct: 129 TCISYALSTAHVPGTQFEIDPLDPELALPWG--HEEPPLLSEKDARAPSLR 177
>gi|262276760|ref|ZP_06054553.1| dTDP-4-dehydrorhamnose 3,5-epimerase [alpha proteobacterium
HIMB114]
gi|262223863|gb|EEY74322.1| dTDP-4-dehydrorhamnose 3,5-epimerase [alpha proteobacterium
HIMB114]
Length = 172
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 10/174 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ ++K+ + D RG F + + +++LK+ FV D SFS IRGLHFQ+
Sbjct: 7 KFKGLVLIKSNQHHDYRGHFREIHDNRVLKK-----KFVFDCMSFSKR-NVIRGLHFQKK 60
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+Q KL+ + G IFD+AVD+R+NS TY + +++IS + I+IP FAHGF L
Sbjct: 61 K-SQGKLISVLKGEIFDVAVDLRKNSKTYKKYFAIKISEKSNFSIFIPENFAHGFFCLSK 119
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
N V YK T++ + + ++ +AW D SI I WP +S KD+N ++
Sbjct: 120 NCIVHYKCTNYRNKKTETTLAWNDPSIGIKWPKKKK---ILSPKDKNGRSFEEL 170
>gi|227827252|ref|YP_002829031.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
M.14.25]
gi|238619412|ref|YP_002914237.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus M.16.4]
gi|227459047|gb|ACP37733.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
M.14.25]
gi|238380481|gb|ACR41569.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus M.16.4]
gi|323474221|gb|ADX84827.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus REY15A]
gi|323476721|gb|ADX81959.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
HVE10/4]
Length = 176
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ ++K + F D RG+F + + S+ + + VQ N S G +RGLH+Q P
Sbjct: 11 GIVLIKPKVFPDKRGFFLEVFKSEDFTKAEIP-NIVQVN-MSSSLKGVVRGLHYQITPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLV G+I D+AVD+R++SPT+G +V +E++ N ++IP GFAHGF LE +
Sbjct: 69 QGKLVFVPKGKILDVAVDLRKSSPTFGKYVKVELNDENHYILWIPPGFAHGFQALEDSIV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V + + YS H+ V + + WP+ + +S+KD P L + +
Sbjct: 129 VYFLTHNEYSKSHERCVNYS----YVDWPIKE---FIISDKDLQCPPLEKAE 173
>gi|326772070|ref|ZP_08231355.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces
viscosus C505]
gi|326638203|gb|EGE39104.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces
viscosus C505]
Length = 224
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL D VQ+N SF+ + G RG+H +
Sbjct: 48 IPGFLRIDLTVHGDNRGWFKENWQREKMLALGLPDFGPVQNNISFNNEIGVTRGIHAE-- 105
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + + + +++P G + + TLE
Sbjct: 106 --PWDKFVSVATGRVFGAWVDLREGPSFGAVYTCEI---DPSVAVFVPRGVGNSYQTLEP 160
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V D +S + + D+++++ WP+ +S+KD+ P L ++ +PF
Sbjct: 161 NTAYTYLVNDHWSADARYTFLNLADETVNVPWPIA-LSEAILSDKDKAHPRLAEV-TPF 217
>gi|227497969|ref|ZP_03928149.1| dTDP-4-dehydrorhamnose reductase [Actinomyces urogenitalis DSM
15434]
gi|226832627|gb|EEH65010.1| dTDP-4-dehydrorhamnose reductase [Actinomyces urogenitalis DSM
15434]
Length = 490
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL D VQ+N SF+ + G RG+H +
Sbjct: 30 IPGFLRIDLSVHGDNRGWFKENWQREKMVALGLPDFGPVQNNISFNDEVGVTRGIHAE-- 87
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + + + + +++P G + + TLE
Sbjct: 88 --PWDKFVSVATGRVFGAWVDLREGPSFGTVYTTEI---DPSVAVFVPKGVGNAYQTLEP 142
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V D +S E + D++ ++ WP+ +S+KD+ P L ++ +PF
Sbjct: 143 NTAYTYLVNDHWSPEARYTFLNLADETANVPWPIP-LEEAVLSDKDKAHPRLAEV-TPF 199
>gi|320531368|ref|ZP_08032338.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320136414|gb|EFW28392.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 193
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL D VQ+N SF+ + G RG+H +
Sbjct: 17 IPGFLRIDLTVHGDNRGWFKENWQREKMLALGLPDFGPVQNNISFNNEVGVTRGIHAE-- 74
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R S + + + +++P G + + TLE
Sbjct: 75 --PWDKFVSVATGRVFGAWVDLREGSSFGAVYTCEI---DPSVAVFVPRGVGNAYQTLEP 129
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V D +S + + D++ ++ WP+ +S+KD+ P L + +PF
Sbjct: 130 NTAYTYLVNDHWSADAQYTFLNLADETANVPWPIA-LSEAILSDKDKAHPRLADV-TPF 186
>gi|293189321|ref|ZP_06608044.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces
odontolyticus F0309]
gi|292821784|gb|EFF80720.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces
odontolyticus F0309]
Length = 475
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL VQ+N SF+ + G RG+H +
Sbjct: 15 IPGFLRIDLTVHGDNRGWFKENWQREKMVALGLPDFQPVQNNISFNDEVGVTRGIHAE-- 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + ++ + G+ +++P G + + TLE
Sbjct: 73 --PWDKFVSVATGRVFGAWVDLREGPSFGTVYTTII---DPGVAVFVPKGVGNSYQTLEP 127
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V D +S + + D++ + WP+ +S+KD+ P + + +PF
Sbjct: 128 NTAYTYLVNDHWSPDARYTFLNLADETAAVDWPIP-LERAILSDKDKAHPRMADV-TPF 184
>gi|154507643|ref|ZP_02043285.1| hypothetical protein ACTODO_00124 [Actinomyces odontolyticus ATCC
17982]
gi|153797277|gb|EDN79697.1| hypothetical protein ACTODO_00124 [Actinomyces odontolyticus ATCC
17982]
Length = 475
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL VQ+N SF+ + G RG+H +
Sbjct: 15 IPGFLRIDLTVHGDNRGWFKENWQREKMVALGLPDFQPVQNNISFNDEVGVTRGIHAE-- 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + ++ + G+ +++P G + + TLE
Sbjct: 73 --PWDKFVSVATGRVFGAWVDLREGPSFGTVYTTII---DPGVAVFVPKGVGNSYQTLEP 127
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
NT Y V D +S + + D++ + WP+ +S+KD+ P + + +PF
Sbjct: 128 NTAYTYLVNDHWSPDARYTFLNLADETAAVDWPIP-LERAILSDKDKAHPRMADV-TPF 184
>gi|116671224|ref|YP_832157.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter sp. FB24]
gi|116611333|gb|ABK04057.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter sp. FB24]
Length = 474
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + D+RGWF + + + + LGL VQ+N SF+ GT RG+H +
Sbjct: 16 IPGVVLYDLPVHGDNRGWFKENWQREKMVALGLPDFRPVQNNISFNEKAGTTRGIHAE-- 73
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + G+IF VD+R + I+IP G + F TLE
Sbjct: 74 --PWDKFISVATGKIFGAWVDLREGP---SFGAVFTAELDPSQAIFIPRGVGNAFQTLED 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V D +S + + D++ I+WP+ +S+KD+ P L +
Sbjct: 129 NTAYTYLVNDHWSADAQGQYTFLNLADETAAISWPVP-LEEAELSDKDKAHPRLADV 184
>gi|284997190|ref|YP_003418957.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
L.D.8.5]
gi|284445085|gb|ADB86587.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus islandicus
L.D.8.5]
Length = 176
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ ++K + F D RG+F + + S+ + + VQ N SFS G +RGLH+Q P
Sbjct: 11 GIVLIKPKVFPDKRGFFLEVFKSEDFTKAEIP-NIVQTNMSFS-FKGVVRGLHYQITPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLV G+I D+AVD+R++SPT+G +V +E++ N ++IP GFAHGF LE +
Sbjct: 69 QGKLVFVPKGKILDVAVDLRKSSPTFGKYVKVELNDENHYILWIPPGFAHGFQALEDSIV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V + + YS + V + + WP+ + +S+KD P L + D
Sbjct: 129 VYFLTHNEYSKSDERCVNYS----YVDWPIKE---FIISDKDSQCPPLEKAD 173
>gi|15898723|ref|NP_343328.1| dTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-2) [Sulfolobus
solfataricus P2]
gi|284173105|ref|ZP_06387074.1| dTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-2) [Sulfolobus
solfataricus 98/2]
gi|13815196|gb|AAK42118.1| dTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-2) [Sulfolobus
solfataricus P2]
gi|261603216|gb|ACX92819.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus solfataricus 98/2]
Length = 176
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ ++K + F D RG+F + + S+ + + VQ N SFS G +RGLH+Q P
Sbjct: 11 GIVLIKPKVFPDKRGFFLEVFKSEDFTKAEIP-NIVQTNMSFS-FKGVVRGLHYQITPKE 68
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q KLV G+I D+A+D+R++SPT+G +V +E++ N ++IP GFAHGF LE +
Sbjct: 69 QGKLVFVPKGKILDVALDLRKSSPTFGKYVKVELNDENHYILWIPPGFAHGFQALEDSIV 128
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
V + + YS + V + + WP+ + +S+KD P L + D
Sbjct: 129 VYFLTHNEYSKSDERCVNYS----YVDWPIKE---FIISDKDSQCPPLEKAD 173
>gi|38232977|ref|NP_938744.1| putative bifunctional protein [Corynebacterium diphtheriae NCTC
13129]
gi|38199235|emb|CAE48866.1| Putative bifunctional protein [Corynebacterium diphtheriae]
Length = 448
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I+ D+RGWF + + + + GL VQ+N SF+ + G RGLH +
Sbjct: 8 IAGVVIVDLDLHGDNRGWFKENWQREKMVAAGLPDFQPVQNNISFNAERGVTRGLHAE-- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V G +F D+R S T+G V+ I+ + +++P G A+GF L
Sbjct: 66 --PWDKFVSVAHGEVFGAWCDLREGSDTFGEVVTCTITPHT--AVFVPRGVANGFQALVD 121
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V D +S + D I WPL T +SEKD+ P L +
Sbjct: 122 NTSYTYLVNDHWSPDATYTAVNLD---MIDWPLPPTE---ISEKDRCHPQLAEA 169
>gi|270284084|ref|ZP_05965516.2| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium gallicum DSM 20093]
gi|270278058|gb|EFA23912.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium gallicum DSM 20093]
Length = 503
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 13/180 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF--VQDNHSFSFDCGTIRGLHFQ 59
NI + + D+RGWF + + + LGL F VQ+N SF+ G RG+H +
Sbjct: 33 NIPGLIVFDLPVHGDNRGWFKENWQKAKMTALGLPKDFEPVQNNISFNAKRGVTRGIHAE 92
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
K + G IF VD+R + I++P G + F L
Sbjct: 93 ----PWDKFISLATGEIFGAWVDLRPG---VTFGEVFTTRLDPSKAIFVPRGVGNSFQAL 145
Query: 120 EMNTEVIYKVTDFYS---VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
E T Y V +S ++ + V D + I WP+ +SE D + P L
Sbjct: 146 EDGTAYSYLVNAHWSLDQKKNYTFVNLADPQLAIQWPIPLEDC-ELSEADLHHPLLKDAK 204
>gi|295839154|ref|ZP_06826087.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. SPB74]
gi|197695604|gb|EDY42537.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces sp. SPB74]
Length = 205
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF--VQDNHSFSFDCGTIRGLHF 58
+ ++ FED RG F+ Y E +F Q NHS S GT+RG+H+
Sbjct: 10 LAVSGAYAFTPPVFEDERGLFTSPYQEPAFVEALGHPLFRVAQSNHSKSRR-GTVRGIHY 68
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR DI VDIR SPT+G W S + +Y P G H F+
Sbjct: 69 TVTPPGVAKYVYCARGRAIDIVVDIRVGSPTFGRWDSAVLDPEGFGAMYFPVGVGHAFIA 128
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
LE +T + Y ++ Y +++ ++ D ++ + P+ + P +S +D
Sbjct: 129 LEDDTVMSYMLSGSYEADNELSLSPLDPALGL--PIPTDVEPLLSARD 174
>gi|86151976|ref|ZP_01070189.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|56783469|emb|CAI38722.1| putative nucleotidyl-sugar epimerase [Campylobacter jejuni]
gi|85841084|gb|EAQ58333.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
jejuni 260.94]
Length = 209
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 26/187 (13%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I+K + D RG+F + + + +E+G++ +Q NHS + G+IRG+H+Q PP
Sbjct: 11 IEGVYIIKPKPICDERGYFERYFCTNDFEEIGMKKPIIQINHSKTIGKGSIRGMHYQIPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + K+VRC+ G I D+A+DIR+NSPT+ + S+E++ N +YIP GFAHGF L
Sbjct: 71 FCETKIVRCLKGSILDVAIDIRKNSPTFLQYFSIELNEVNNKYLYIPEGFAHGFQVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSI-----------------------DITWPLLDTIL 159
E++Y VT ++ D G+ DK+I I WPL
Sbjct: 131 AEILYLVTQEFNSSADRGINPFDKAIISTNNFYQRNRHNVFENYKKKGGGIKWPLGSGN- 189
Query: 160 PSVSEKD 166
+S KD
Sbjct: 190 --ISRKD 194
>gi|271962221|ref|YP_003336417.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptosporangium roseum DSM
43021]
gi|270505396|gb|ACZ83674.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptosporangium roseum DSM
43021]
Length = 187
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
I+ V + D RG F++T+ + + GL FVQD+ S S GT+RG+H +
Sbjct: 7 KIDGVLLFVPTPHRDDRGLFTRTFDKAVAEGAGLDFSAFVQDSQSRSRQ-GTVRGMHGR- 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVRC G + D+ VD R SPT+G S+ + + +Y+P G HGF L
Sbjct: 65 SGRGEAKLVRCARGAVHDVLVDARPGSPTFGEQTSVLLDDETFVTLYVPPGLLHGFQALT 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T+V Y++ + D V + D + I WPL + +S +D + Q+
Sbjct: 125 GQTDVCYRIDREHDPAEDLSVRYDDPDLRIDWPLPVSA---ISGRDLSAGSWTQL 176
>gi|145223884|ref|YP_001134562.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK]
gi|315444213|ref|YP_004077092.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1]
gi|145216370|gb|ABP45774.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK]
gi|315262516|gb|ADT99257.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1]
Length = 477
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
+I + + D+RGWF + + + GL D VQ+N SF+ GT+RG+H +
Sbjct: 14 SIPGLTLWDLPVHGDNRGWFKENWQRAKMVAAGLPDFGPVQNNISFNQAPGTLRGIHAE- 72
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + +GRIF VD+R + + + +++P G + F TLE
Sbjct: 73 ---PWDKFISVGSGRIFGAWVDLRSGPTFGTVFTAEI---DPSRAVFVPRGVGNAFQTLE 126
Query: 121 MNTEVIYKVTDFYSVE-HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T +Y V D YS + D+++ I WP+ +SEKD+ P L+++
Sbjct: 127 PETVYVYLVNDHYSPGVGYPSLNPGDEALAIEWPIP-LDRAEMSEKDRAQPPLSEV 181
>gi|319950747|ref|ZP_08024641.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dietzia cinnamea P4]
gi|319435577|gb|EFV90803.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Dietzia cinnamea P4]
Length = 219
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ + R+ D RG F + ++ +E+ G + Q N S S + G +RGLH+
Sbjct: 6 LSVTGAWEITPRQISDDRGVFHEAFTDPAFREMTGHRFDLAQVNVSVSGE-GVLRGLHYA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C +G +FD+ VD+R SPT+G W + + + +YIP G AHGF+ L
Sbjct: 65 EVPPGQAKYVLCPSGTVFDVVVDVRVGSPTFGEWAGVLLDSVEQRAVYIPEGVAHGFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLPFLNQI 175
E + V+Y ++ + + + D I I WP + I +S++D++ P L +
Sbjct: 125 EPQSTVMYFCSEGWRPGAEHVIDAFDPKIAIDWPQMALDGTAIEHVMSDRDRDAPSLLDV 184
>gi|5902168|gb|AAD55452.1| dTDP-4-keto-6-deoxyglucose 3,5-epimerase [Streptomyces
antibioticus]
Length = 204
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
++++ + D RG F + + + +++G Q N S S
Sbjct: 4 LDVDGAWLYTPEIMRDERGEFLEWFRGRTFQEKIGHPLSLAQANCSVSRKAFCAASTS-P 62
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
PP QAK V C +G + D+ VD+RR SPT+G W ++ + A +Y+ G H FM L
Sbjct: 63 TPPPGQAKYVTCASGTVLDVVVDVRRGSPTFGRWAAVRLDAARHQGLYLAEGLGHAFMAL 122
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPS 161
+ V+Y + Y E + V D +I I WP I+P
Sbjct: 123 TDDATVVYLCSQPYVAEAERAVDPLDPAIGIEWPTDIDIVPV 164
>gi|296118114|ref|ZP_06836696.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Corynebacterium ammoniagenes DSM 20306]
gi|295969000|gb|EFG82243.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Corynebacterium ammoniagenes DSM 20306]
Length = 468
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
+I+ + I+ D+RGWF + + + + GL D VQ N SF+ G RGLH +
Sbjct: 7 DIDGLSIIHLDVHGDNRGWFKENWQRTTMGQAGLPDFGPVQHNLSFNASAGVTRGLHAE- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLV G++F D+R S +YG V EI + +++P G A+GF LE
Sbjct: 66 ---PWDKLVSIAYGKVFGAWCDLREGSTSYGQLVHAEIGPDK--AVFVPRGVANGFQALE 120
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V+D +S + D + WPL T +SEKD+ P L +
Sbjct: 121 DNTVYSYLVSDHWSPDAQYTAVNLD---MVDWPLTPTE---ISEKDRAHPQLVDV 169
>gi|256371350|ref|YP_003109174.1| dTDP-4-dehydrorhamnose 35-epimerase related [Acidimicrobium
ferrooxidans DSM 10331]
gi|256007934|gb|ACU53501.1| dTDP-4-dehydrorhamnose 35-epimerase related [Acidimicrobium
ferrooxidans DSM 10331]
Length = 180
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 11/175 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V +++ D+RG F +TY L VQ S L
Sbjct: 5 EIADVIVIRPTVHADARGAFQETYRRSWFP---LGREMVQG----SRSDKVAGSLVGMHY 57
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
QA + G + D R S T G SL + + + ++IP G AHGF L
Sbjct: 58 HLHQADYWYVVRGTAQVLLYDFRHGSRTEGTTWSLLMGDEDPIGLFIPPGVAHGFAALTD 117
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T + Y V +Y+ + + G+ W D + W L D P +SE+DQ P + Q+
Sbjct: 118 LT-LTYLVDGYYNPDDELGLRWNDPTFHGLWQLDD---PVISERDQTNPLIAQVP 168
>gi|159037628|ref|YP_001536881.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinispora arenicola
CNS-205]
gi|157916463|gb|ABV97890.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salinispora arenicola
CNS-205]
Length = 187
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + + +D RG F + +G + Q NHS S G +RG+HF
Sbjct: 6 LAVPGSFEFTPQTHDDHRGVFVSPMQQTPFVEAVGHRFEVAQTNHSRS-ARGVLRGVHFT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C GR+ D+ VD+R SP +G W ++E+ + +Y+P G H F+ L
Sbjct: 65 ATPPGQAKYVHCPHGRVLDVVVDLRVGSPAFGTWDAVELDPISFRAVYLPVGVGHTFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E ++ V Y + Y+ E + GV D + + WP +SE+D+ L +
Sbjct: 125 EDDSIVSYLASTEYAAERELGVNPLDPQLALPWP--KGTEFCLSERDRTAVSLEEA 178
>gi|296137803|ref|YP_003645046.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tsukamurella paurometabola
DSM 20162]
gi|296025937|gb|ADG76707.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Tsukamurella paurometabola
DSM 20162]
Length = 184
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----GLQDVFVQDNHSFSFDCGTIRGLH 57
+++ V +L D RG F++T+ ++ G FVQD+ S S G +RGLH
Sbjct: 7 DLSDVVLLVPEPHRDQRGLFTRTFDAEEFDAHLGVPGASASFVQDSQSRSHG-GVVRGLH 65
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ +AKLVRC G + D+ VDIR +SPT+G S + N +Y+P GF HGF
Sbjct: 66 GR-SGRGEAKLVRCAHGAVLDVLVDIRPDSPTFGRHASFRLDDENFHHLYVPPGFLHGFQ 124
Query: 118 TLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
L +V Y++ + D GV + D + I+WPL T VS ++ +++
Sbjct: 125 ALTPVADVCYRIDRPHDPNEDLGVVYNDPDLAISWPLPVT---VVSSREAAAGSWSEL 179
>gi|47716693|gb|AAT37542.1| putative NDP-hexose-3,5-epimerase [Streptomyces globisporus]
Length = 190
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 15 EDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
+D RG F ++ + L+ +G Q N+S S T+RG+H P QAK V C+
Sbjct: 21 KDERGAFFESLRTDELERVVGHPFEVRQINYSVS-RRNTLRGIHSVTSPPGQAKYVSCVR 79
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
G D VD+R SPT+G + S + A +G +Y+P G HGF+TL + + Y ++ Y
Sbjct: 80 GAFRDFVVDLRVGSPTFGQYDSNVLDAESGRAVYVPEGVGHGFLTLTDDACICYVLSSTY 139
Query: 134 SVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ D + + W + P +S+KD++ P L
Sbjct: 140 VPGTQIDIDPLDPDLALPWGFTEP--PLMSDKDRDAPSLA 177
>gi|170785369|gb|ACB37728.1| bifunctional NDP-hexose 3,5- (or 5-) epimerase/putative
dTDP-4-keto-6-deoxyglucose-2,3-dehydratase
[Micromonospora chalcea]
Length = 200
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYS-SKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+I + + D RG F + + S+LL+++G + Q N+S S T+RG+H
Sbjct: 10 SIPGAYRITVTQHSDRRGSFFEAWRFSELLQQVGQRFEIRQVNYSVS-RKNTLRGIHGTT 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P Q+KLV C+ G D+AVD+R SPT+G + A +G+ +Y+ G H F+ L
Sbjct: 69 LPPGQSKLVTCVRGAAMDVAVDLRVGSPTFGKFDVTFQDATSGIGVYLTEGIGHAFLALT 128
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
+T + Y Y VA D ++ I W L P +S+KD
Sbjct: 129 DDTCMSYLCGAEYVPGTMIDVAALDPALGIPWKLDGP--PVMSDKD 172
>gi|48425092|pdb|1OFN|A Chain A, Purification, Crystallisation And Preliminary Structural
Studies Of Dtdp-4-Keto-6-Deoxy-Glucose-5-Epimerase
(Evad) From Amycolatopsis Orientalis; The Fourth Enzyme
In The Dtdp-L-Epivancosamine Biosynthetic Pathway.
gi|48425093|pdb|1OFN|B Chain B, Purification, Crystallisation And Preliminary Structural
Studies Of Dtdp-4-Keto-6-Deoxy-Glucose-5-Epimerase
(Evad) From Amycolatopsis Orientalis; The Fourth Enzyme
In The Dtdp-L-Epivancosamine Biosynthetic Pathway.
gi|49258364|pdb|1OI6|A Chain A, Structure Determination Of The Tmp-Complex Of Evad
gi|49258365|pdb|1OI6|B Chain B, Structure Determination Of The Tmp-Complex Of Evad
gi|2894174|emb|CAA11781.1| PCZA361.16 [Amycolatopsis orientalis]
Length = 205
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQ 59
+ ++ R F D RG Y + E +F S +RG+H+
Sbjct: 6 LAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P AK V C G+ DI +DIR SPT+G W S+ + + +Y+P G H F+ L
Sbjct: 66 VTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T + Y ++ Y + + ++ D ++ + P+ + P VS++D+ L +
Sbjct: 126 EDDTVMSYMLSRSYVTQDELALSALDPALGL--PIDIGVEPIVSDRDRVAITLAEA 179
>gi|257067486|ref|YP_003153741.1| dTDP-4-dehydrorhamnose reductase [Brachybacterium faecium DSM 4810]
gi|256558304|gb|ACU84151.1| dTDP-4-dehydrorhamnose reductase [Brachybacterium faecium DSM 4810]
Length = 479
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ D RGWF + + + + GL D+ VQ+N SF+ G RG+H +
Sbjct: 11 IPGLLVIDLPVHGDPRGWFKENWQREKMLAAGLPDLGPVQNNISFNQTVGVTRGIHAE-- 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + GR+F VD+RR + + IY+P G + F TLE
Sbjct: 69 --PWDKYISVATGRVFGAWVDLRRGPSFGATYWHEI---TPDIAIYVPRGVGNAFQTLEA 123
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V +S + D++ I WP+ +S KD+ P L +
Sbjct: 124 PAAYTYLVNAHWSAAAQEQYTFLHLADETAAIPWPIP-LEQAELSAKDRAHPLLADV 179
>gi|169884270|gb|ACA97814.1| RfbD [Xylella fastidiosa]
gi|169884272|gb|ACA97815.1| RfbD [Xylella fastidiosa]
gi|169884274|gb|ACA97816.1| RfbD [Xylella fastidiosa]
gi|169884276|gb|ACA97817.1| RfbD [Xylella fastidiosa]
gi|169884278|gb|ACA97818.1| RfbD [Xylella fastidiosa]
Length = 146
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Query: 13 KFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCI 72
F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV +
Sbjct: 1 VFDDARGEFFEAWNAECFERQGMSSRFVQSNVSISMY-GVLRGLHYQWPR-PQGKLVGVL 58
Query: 73 AGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132
G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD
Sbjct: 59 EGEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDV 118
Query: 133 YSVEHDSGVAWQDKSIDITWPLLDTILPSVS 163
Y E D+G+ W D I + WP+ +P +S
Sbjct: 119 YVKEADAGIRWNDALIGVDWPI---AVPLLS 146
>gi|326332007|ref|ZP_08198292.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Nocardioidaceae bacterium Broad-1]
gi|325950145|gb|EGD42200.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Nocardioidaceae bacterium Broad-1]
Length = 460
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ D+RGWF + + + ELGL D VQ+N SF+ G RG+H +
Sbjct: 11 IPGLLVVHLPVHGDARGWFKENWQRSKMVELGLPDFGPVQNNMSFNASRGATRGIHTE-- 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R S + +++P G + + LE
Sbjct: 69 --PWDKFVSVACGRVFAAWVDMREGSSFGTTFSVEIG---PETAVFVPRGVGNSYQALED 123
Query: 122 NTEVIYKVTDFYSVEHDS-GVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V D + H + D++ I WP+ +SEKD+ P L +I
Sbjct: 124 RTVYSYLVNDHWRPGHAYPALHLGDETAAIPWPIP-LDSAEISEKDRANPRLAEI 177
>gi|315937040|gb|ADU56049.1| hypothetical protein CA37-26 [uncultured organism CA37]
Length = 203
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFD-CGTIRGLHFQRPP 62
+ + DSRG F+ Y E + +F + S + G +RG+H+ P
Sbjct: 12 DGAFQFTPAVYADSRGLFASPYQDPAFAEALDRPLFPVRDVSHNRSARGVLRGIHYTATP 71
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AK V C G++ D VD+R SPT+G W ++S +N +YIP G H F++L +
Sbjct: 72 PGRAKYVYCPYGQVQDYLVDLRIGSPTFGRWEMTDLSGDNCRALYIPVGVGHAFLSLRDD 131
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ V+Y +++ Y ++ ++ D I + P+ + S++D P L +
Sbjct: 132 SVVVYVMSEGYVSANELAISPFDPEIGL--PIPPGLAIQQSDRDAAAPTLAEA 182
>gi|268680389|ref|YP_003304820.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurospirillum deleyianum
DSM 6946]
gi|268618420|gb|ACZ12785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurospirillum deleyianum
DSM 6946]
Length = 190
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + + + D+RG+ + + + + G + F QD S S G IRGLH
Sbjct: 6 LEIPELILCEPVFHNDNRGFVFEAFKKESFNKFVGYEVDFCQDIISHS-KYGVIRGLHTN 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+AQ+KLV + G+I D+AVD R SPT+ VS+E+ Q+++P GF HGF L
Sbjct: 65 TLNFAQSKLVSVLRGKILDVAVDFRVGSPTFAKVVSVELDDVENKQLFVPKGFLHGFSVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
V K+ ++ GV + D +++ W + + + + D L + SPF
Sbjct: 125 SNKAIVNMKIDRYFESGESIGVRYNDCDLNVEWKIKPQDI-ILGKADIGLKMFSDAVSPF 183
Query: 180 EY 181
+Y
Sbjct: 184 DY 185
>gi|254456277|ref|ZP_05069706.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083279|gb|EDZ60705.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 191
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ I K F+D RG+F + + K L + FV D +S S +RGLH Q
Sbjct: 17 KFPGLVIYKRETFDDKRGYFRELFLKKDLNK-----KFVFDYYSLSKK-NVLRGLHLQ-L 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KL+ ++G+IFD+A+D R S T+ + ++E+S N + +YIP GFAHGF +L
Sbjct: 70 KKPQGKLITVLSGKIFDVALDCRPKSKTFRQFYTVELSENENISLYIPEGFAHGFCSLAN 129
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT + Y+ T++ ++G+ W+DK + I WP VS KD+
Sbjct: 130 NTLLHYRCTNYRDKNSETGIYWKDKDLAINWPKKKFF---VSSKDKKNILFKNF 180
>gi|224812417|gb|ACN64855.1| PokS7 [Streptomyces diastatochromogenes]
Length = 204
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + D+RG F + +G V Q NHS S G +RGLHF
Sbjct: 9 LAVAGSFEFTPEIHTDARGLFVSPLQEEAFVAAVGEPFVTAQTNHSRSAR-GVLRGLHFT 67
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C GR D VDIR SPT+G W +E+ A + +YIP G H F+ L
Sbjct: 68 TTPPGQAKYVYCAQGRALDAVVDIRLGSPTFGKWDIVEMDAVSYRAVYIPDGAGHAFLAL 127
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +T + Y V+ Y E + V D ++ + WP + +SE+D L + +
Sbjct: 128 DDDTVMSYLVSSAYRTELEQAVDPLDPALGLPWPY--DMEFVMSERDTTAVSLAEAE 182
>gi|227832078|ref|YP_002833785.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC
700975]
gi|262184067|ref|ZP_06043488.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC
700975]
gi|227453094|gb|ACP31847.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC
700975]
Length = 454
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + I++ D+RGWF + + + + GL VQ+N SF+ + G RGLH +
Sbjct: 8 IEGLLIVELDVHGDNRGWFKENWQREKMVAAGLPDFQPVQNNVSFNAEKGVTRGLHAE-- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLV +GR F D+R S T+G V+ E+ + +++P G A+GF LE
Sbjct: 66 --PWDKLVSVASGRAFGAWCDLREGSATFGQLVTHELREDV--AVFVPRGVANGFQALEA 121
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSID-ITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D +S + + ++ + WPL T +S+KD+ P L +
Sbjct: 122 CA-YSYLVNDHWSPDAEYTCV----NLGMVDWPLEPTE---ISDKDKEHPALADV 168
>gi|53794562|gb|AAU93789.1| dTDP-4-keto-6-deoxyglucose 3,5-epimerase [Aeromicrobium erythreum]
Length = 197
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + D+RG F+ + +G Q NH S G +RG+HF
Sbjct: 6 LRVAGGWEFTPTVHHDARGVFASPLQEEAFVAAVGHPFPVAQTNHIVSDR-GVLRGVHFT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q+K V C AGR D+ +D+R +SPT+G W ++E+ +Y P G AH FM L
Sbjct: 65 -ASPGQSKYVHCAAGRALDVMIDVRTDSPTFGTWEAVELDPRRCNALYFPIGTAHAFMAL 123
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E T + Y V+ Y E + + D + + WP + +S +D+ Q
Sbjct: 124 EPGTIMSYLVSTPYDAELELAIDPFDPELALPWP--ADVPALLSGRDEVAMSFAQA 177
>gi|169884280|gb|ACA97819.1| RfbD [Xylella fastidiosa]
gi|169884282|gb|ACA97820.1| RfbD [Xylella fastidiosa]
gi|169884284|gb|ACA97821.1| RfbD [Xylella fastidiosa]
gi|169884286|gb|ACA97822.1| RfbD [Xylella fastidiosa]
gi|169884288|gb|ACA97823.1| RfbD [Xylella fastidiosa]
gi|169884290|gb|ACA97824.1| RfbD [Xylella fastidiosa]
gi|169884292|gb|ACA97825.1| RfbD [Xylella fastidiosa]
gi|169884294|gb|ACA97826.1| RfbD [Xylella fastidiosa]
gi|169884296|gb|ACA97827.1| RfbD [Xylella fastidiosa]
gi|169884298|gb|ACA97828.1| RfbD [Xylella fastidiosa]
gi|169884300|gb|ACA97829.1| RfbD [Xylella fastidiosa]
gi|169884302|gb|ACA97830.1| RfbD [Xylella fastidiosa]
gi|169884304|gb|ACA97831.1| RfbD [Xylella fastidiosa]
Length = 146
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 13 KFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCI 72
F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV +
Sbjct: 1 VFDDARGEFFEAWNAECFQRQGMSSRFVQSNVSISMY-GVLRGLHYQWPR-PQGKLVGVL 58
Query: 73 AGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132
G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD
Sbjct: 59 EGEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDV 118
Query: 133 YSVEHDSGVAWQDKSIDITWPLLDTILPSVS 163
Y E D+G+ W D I + WP+ P +S
Sbjct: 119 YVKEADAGIRWNDAVIGVDWPI---AAPLLS 146
>gi|169884214|gb|ACA97786.1| RfbD [Xylella fastidiosa]
gi|169884216|gb|ACA97787.1| RfbD [Xylella fastidiosa]
gi|169884218|gb|ACA97788.1| RfbD [Xylella fastidiosa]
gi|169884220|gb|ACA97789.1| RfbD [Xylella fastidiosa]
gi|169884222|gb|ACA97790.1| RfbD [Xylella fastidiosa]
gi|169884224|gb|ACA97791.1| RfbD [Xylella fastidiosa]
gi|169884226|gb|ACA97792.1| RfbD [Xylella fastidiosa]
gi|169884228|gb|ACA97793.1| RfbD [Xylella fastidiosa]
gi|169884230|gb|ACA97794.1| RfbD [Xylella fastidiosa]
gi|169884232|gb|ACA97795.1| RfbD [Xylella fastidiosa]
gi|169884234|gb|ACA97796.1| RfbD [Xylella fastidiosa]
gi|169884236|gb|ACA97797.1| RfbD [Xylella fastidiosa]
gi|169884238|gb|ACA97798.1| RfbD [Xylella fastidiosa]
gi|169884240|gb|ACA97799.1| RfbD [Xylella fastidiosa]
gi|169884242|gb|ACA97800.1| RfbD [Xylella fastidiosa]
gi|169884244|gb|ACA97801.1| RfbD [Xylella fastidiosa]
gi|169884246|gb|ACA97802.1| RfbD [Xylella fastidiosa]
gi|169884248|gb|ACA97803.1| RfbD [Xylella fastidiosa]
gi|169884250|gb|ACA97804.1| RfbD [Xylella fastidiosa]
gi|169884252|gb|ACA97805.1| RfbD [Xylella fastidiosa]
gi|169884254|gb|ACA97806.1| RfbD [Xylella fastidiosa]
gi|169884256|gb|ACA97807.1| RfbD [Xylella fastidiosa]
gi|169884258|gb|ACA97808.1| RfbD [Xylella fastidiosa]
gi|169884260|gb|ACA97809.1| RfbD [Xylella fastidiosa]
gi|169884262|gb|ACA97810.1| RfbD [Xylella fastidiosa]
gi|169884264|gb|ACA97811.1| RfbD [Xylella fastidiosa]
gi|169884266|gb|ACA97812.1| RfbD [Xylella fastidiosa]
gi|169884268|gb|ACA97813.1| RfbD [Xylella fastidiosa]
Length = 146
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Query: 13 KFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCI 72
F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV +
Sbjct: 1 VFDDARGEFFEAWNAECFQRQGMSSRFVQSNVSISMY-GVLRGLHYQWPR-PQGKLVGVL 58
Query: 73 AGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132
G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD
Sbjct: 59 EGEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDV 118
Query: 133 YSVEHDSGVAWQDKSIDITWPLLDTILPSVS 163
Y E D+G+ W D I + WP+ +P +S
Sbjct: 119 YVKEADAGIRWNDALIGVDWPI---AVPLLS 146
>gi|297526887|ref|YP_003668911.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Staphylothermus hellenicus
DSM 12710]
gi|297255803|gb|ADI32012.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Staphylothermus hellenicus
DSM 12710]
Length = 141
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 51 GTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPT 110
+R L++Q P Q +L+ + GRI D+AVDIRR SP YG +V+ E+S +N L ++IP
Sbjct: 12 DIVRDLYYQLEPMEQGRLITVLRGRILDVAVDIRRGSPWYGKYVAAELSGDNHLLLWIPP 71
Query: 111 GFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
GFAHGF LE +T V+Y VT YS EH+ + W D I I WP+ VSEKD+ P
Sbjct: 72 GFAHGFQALEDDTIVLYLVTKEYSPEHERCIRWDDPEISIDWPVKP---AIVSEKDKKCP 128
Query: 171 FLNQIDSPFEY 181
L+Q ++ F+Y
Sbjct: 129 PLSQAETNFKY 139
>gi|126030141|pdb|1WA4|A Chain A, Crystal Structure Of The M131f L135a Evad Double Mutant
Length = 205
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQ 59
+ ++ R F D RG Y + E +F S +RG+H+
Sbjct: 6 LAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P AK V C G+ DI +DIR SPT+G W S+ + + +Y+P G H F+ L
Sbjct: 66 VTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T Y + Y + + ++ D ++ + P+ + P VS++D+ L +
Sbjct: 126 EDDTVFSYMASRSYVTQDELALSALDPALGL--PIDIGVEPIVSDRDRVAITLAEA 179
>gi|289704883|ref|ZP_06501300.1| putative dTDP-4-dehydrorhamnose reductase [Micrococcus luteus SK58]
gi|289558379|gb|EFD51653.1| putative dTDP-4-dehydrorhamnose reductase [Micrococcus luteus SK58]
Length = 471
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 17/182 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV------FVQDNHSFSFDCGTIRGL 56
I + +L D+RGWF + + + ++ L ++ VQ+N SF+ GT RG+
Sbjct: 8 IPGLLVLDLDVHGDNRGWFKENWQREKIRALAVEHPRLASLAPVQNNISFNDAVGTTRGI 67
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + K V GRIF VD+R +++P G + +
Sbjct: 68 HAE----PWDKYVAVAHGRIFGAWVDLREGPSFGAVATVELG---PEKAVFVPRGVGNSY 120
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLN 173
TLE +T Y V D +S + + D + I WP+ +S+KD+ P L
Sbjct: 121 QTLEPDTAYTYLVNDHWSADAQGQYTFLNLADPTAAIAWPIP-LEDAELSDKDRAHPMLA 179
Query: 174 QI 175
+
Sbjct: 180 DV 181
>gi|284992554|ref|YP_003411108.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geodermatophilus obscurus DSM
43160]
gi|284065799|gb|ADB76737.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geodermatophilus obscurus DSM
43160]
Length = 198
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+L D+RG F++ Y + +L +G Q NHS S G +RG+HF P
Sbjct: 8 DAYVLDLVPHGDARGRFTEWYRADVLAGVVGHGLPLAQANHSVS-ARGVLRGVHFALVPP 66
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
QAK V C AGR+ D+ VD+R SPT+G ++ + + +Y+ G H F++L +
Sbjct: 67 GQAKYVYCPAGRVLDVVVDVRVGSPTFGVHDAVVLDSEQPRAVYLAEGLGHAFLSLADGS 126
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V Y V+ Y + GV+ D ++D+ WP D + +S KDQ P L +
Sbjct: 127 SVTYLVSSGYDPAREFGVSPVDPALDLPWP--DDVEFELSAKDQQAPTLAEA 176
>gi|328955704|ref|YP_004373037.1| dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose
reductase [Coriobacterium glomerans PW2]
gi|328456028|gb|AEB07222.1| dTDP-4-dehydrorhamnose 3,5-epimerase ;dTDP-4-dehydrorhamnose
reductase [Coriobacterium glomerans PW2]
Length = 486
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
+I + +L D+RGWF + + + LGL VQ+N S++ G RG+H +
Sbjct: 13 DIPGLVVLDLPVHGDNRGWFKENWQRAKMVALGLPDIRPVQNNISYNTSRGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G IF VD+R + + + I++P G + F TL
Sbjct: 72 ---PWDKYISIAIGEIFGAWVDLRPGATFGRVFTCTL---DPSKAIFVPRGVGNAFQTLA 125
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S+ V D + I WP+ +S+ D+ P L ++
Sbjct: 126 DGTTYTYLVDAHWSLAQKRTYTFVNLADPDLAIDWPIP-LTAAELSDADRAHPPLREV 182
>gi|326385995|ref|ZP_08207619.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209220|gb|EGD60013.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 149
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 74/145 (51%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
Query: 36 QDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVS 95
FVQ+N S S GTIRGLHFQ P+AQ KLVRC+ G IFD+AVD+R SPTYG W
Sbjct: 3 PVEFVQENQSLSMAQGTIRGLHFQSEPFAQGKLVRCVEGAIFDVAVDLRHGSPTYGQWAG 62
Query: 96 LEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL 155
++A + Q++IP+GFAHGF TL T V YKVT +YS E+D G+AW D +++ WP
Sbjct: 63 ATLTAQDCNQLWIPSGFAHGFCTLVPQTVVAYKVTAYYSRENDLGLAWDDPDVNVAWP-D 121
Query: 156 DTILPSVSEKDQNLPFLNQIDSPFE 180
+S KDQ P L + S FE
Sbjct: 122 VADPTKLSAKDQVQPRLADLPSYFE 146
>gi|325963884|ref|YP_004241790.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469971|gb|ADX73656.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 482
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + DSRGWF + + + + LGL VQ+N S++ GT RG+H +
Sbjct: 16 IPGVVLYDLPVHGDSRGWFKENWQREKMLALGLPDFRPVQNNVSYNEKAGTTRGIHAE-- 73
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + G+IF VD+R + + I+IP G + F TLE
Sbjct: 74 --PWDKFISVATGKIFGAWVDLREGPSFGAVFTCEL---DPSQAIFIPRGVGNAFQTLED 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V D +S + + D++ I WP+ VSEKD+ P LN +
Sbjct: 129 NTAYTYLVNDHWSADAQGQYTFLNLADEASAIAWPVP-LDQAEVSEKDRTHPRLNDV 184
>gi|32492535|gb|AAP85353.1| putative 3-5-epimerase [Streptomyces griseoruber]
Length = 226
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQ 59
+ + V F D RG F + ++F SFS +RG+H+
Sbjct: 6 LKVAGVLEFSPPVFRDPRGLFVSPFQRDAFVAATGHELFGVAQTSFSVSRRGAVRGIHYT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
R P AK V C GR D+ VD+R SPT+G W S+ + ++ +Y+P G H F L
Sbjct: 66 RVPPGTAKYVHCPRGRALDMVVDLRLGSPTFGAWDSVVLDQDDCRALYLPVGVGHAFAAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ 167
+T + Y ++ Y+ E++ V+ D + + PL + P +SE+D+
Sbjct: 126 TDDTLMAYTLSTAYAPENELAVSVHDPRLRL--PLPRDVPPLLSERDR 171
>gi|229008635|ref|ZP_04166047.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus mycoides Rock1-4]
gi|228752640|gb|EEM02256.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus mycoides Rock1-4]
Length = 155
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 72/155 (46%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 30 LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT 89
L+ LG+ FVQDN S+S + G IRGLHFQ P AQ KLV+ I G IFD+ VD+R+ SPT
Sbjct: 2 LRHLGIHHKFVQDNTSYSKEAGVIRGLHFQLEPRAQTKLVQVIQGAIFDVIVDLRKGSPT 61
Query: 90 YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSID 149
Y W S ++ +N + +P GFAHGF TL +T V YKV +FY DSG+AW D+
Sbjct: 62 YKKWQSFLLTGDNHRLLLVPKGFAHGFCTLVPHTIVHYKVDEFYDASCDSGIAWDDEEFA 121
Query: 150 ITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGL 184
I+WP+ + P +SEKD LP + F++ +
Sbjct: 122 ISWPVSN---PILSEKDGMLPKFTETTHYFQFKEI 153
>gi|171466624|gb|ACB46499.1| sugar 5-epimerase [Actinomadura kijaniata]
Length = 202
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYS-SKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
M++ ++ + D RG F +++ S+LL++ G Q N+S S T+RG+H
Sbjct: 9 MSVAGAFRIRPTQIPDRRGRFYESWRFSELLQQAGHPFEIRQVNYSVS-RKNTLRGIHGT 67
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P Q KLV C+ G D+AVD+R SPT+G + A +G+ +Y+ G H F+ L
Sbjct: 68 TIPPGQTKLVTCVRGAALDVAVDLRVGSPTFGRFDVTLQEAGSGIGVYLADGIGHAFLAL 127
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
+T + Y Y V D ++ I W L P +S+KD
Sbjct: 128 TDDTCMNYLCGAEYVPGTMIDVQALDPALGIPWELDGP--PIMSDKD 172
>gi|317124308|ref|YP_004098420.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Intrasporangium calvum DSM
43043]
gi|315588396|gb|ADU47693.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Intrasporangium calvum DSM
43043]
Length = 199
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + R+F D RG F++ + + L E G + Q N S S G +RG+HF
Sbjct: 6 LTIAGAFEVTPRQFHDDRGTFAEGFRADRLAEALGHEMRVRQTNISVS-QAGALRGIHFA 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P +QAK V +G D +DIR SPT+G W S+ + A + +Y+ G H L
Sbjct: 65 ALPPSQAKFVTVTSGVFLDFVIDIRVGSPTFGQWDSVRLDAVDRRAVYVAEGLGHALACL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
E +Y ++ ++ + GV D ++ + P + +P VS+KD
Sbjct: 125 ED-GVAVYLCSEVFNPAAERGVNPLDPAVGLALP--EGFVPVVSDKD 168
>gi|317506042|ref|ZP_07963872.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Segniliparus rugosus ATCC
BAA-974]
gi|316255700|gb|EFV14940.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Segniliparus rugosus ATCC
BAA-974]
Length = 199
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 11/185 (5%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ I + D RG ++ + + +E G Q N S S G +RG+H
Sbjct: 7 LPIAGAWEITPELHSDDRGVNAELFRAGATREATGRDFTTAQVNCSVSKA-GVLRGVHLA 65
Query: 60 RPPYA-----QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAH 114
P Q K V +G +FD+ VD+R +SPT+G W ++ +S +++ G H
Sbjct: 66 LGPDGTLAGGQEKYVTVASGSVFDVVVDLRSDSPTFGKWEAVLLSGERRNAVFLSAGLGH 125
Query: 115 GFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD----TILPSVSEKDQNLP 170
+ L +T ++Y + Y + V D ++ I WP D I SE+D
Sbjct: 126 AVLALTEDTVLLYLCSSEYDPRLERSVDALDPALAIAWPSKDAHGHAIEFLRSERDHAAL 185
Query: 171 FLNQI 175
L +
Sbjct: 186 RLAEA 190
>gi|333023925|ref|ZP_08451989.1| PlaA8 [Streptomyces sp. Tu6071]
gi|81250718|gb|ABB69763.1| PlaA8 [Streptomyces sp. Tu6071]
gi|332743777|gb|EGJ74218.1| PlaA8 [Streptomyces sp. Tu6071]
Length = 191
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
M I + K+ D RG F + + + L + G Q N S S TIRG+H
Sbjct: 6 MAIAGAFRIIPDKYHDCRGCFFEAFRIEELRRATGFPFQVRQGNVSVS-RRSTIRGVHGT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+AKL+ C G + D+ VD+R SP +G + + ++ ++G I++ G H + L
Sbjct: 65 GGDSGEAKLISCARGAVLDVVVDLRVGSPVFGTFEAAPLTEDSGELIFLVPGLGHAYQAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+T + Y + + + D+ + + W L + P +S+KD+ P L Q
Sbjct: 125 TDDTRITYLCAERFVPGSQIDINPLDQELALPWDLSEE--PVISDKDRAAPGLRQA 178
>gi|171742181|ref|ZP_02917988.1| hypothetical protein BIFDEN_01287 [Bifidobacterium dentium ATCC
27678]
gi|171277795|gb|EDT45456.1| hypothetical protein BIFDEN_01287 [Bifidobacterium dentium ATCC
27678]
Length = 485
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + ELGL D VQ+N SF+ G RG+H +
Sbjct: 16 NIPGLLVFDLPVHGDNRGWFKENWQRAKMLELGLPDFGPVQNNISFNAKKGVTRGIHAE- 74
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G IF VD+R + + + IY+P G + F LE
Sbjct: 75 ---PWDKYISIATGEIFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALE 128
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 129 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIPWPIP-LEESERSEADLHHPMLKDAK 186
>gi|315124869|ref|YP_004066873.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315018591|gb|ADT66684.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 196
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/146 (40%), Positives = 93/146 (63%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I+K + D RG+F + + + +E+G++ +Q NHS + G+IRG+H+Q PP
Sbjct: 11 IEGVYIIKPKPICDERGYFERYFCTNDFEEIGMKKPIIQINHSKTIGKGSIRGMHYQIPP 70
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + K+VRC+ G I D+A+DIR+NSPT+ + S+E++ N +YIP GFAHGF L
Sbjct: 71 FCETKIVRCLKGSILDVAIDIRKNSPTFLQYFSIELNEVNNKYLYIPEGFAHGFQVLSDE 130
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSI 148
E++Y VT ++ D G+ DK+I
Sbjct: 131 AEILYLVTQEFNSSADRGINPFDKAI 156
>gi|306822149|ref|ZP_07455531.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium ATCC
27679]
gi|304554531|gb|EFM42436.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium ATCC
27679]
Length = 485
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + ELGL D VQ+N SF+ G RG+H +
Sbjct: 16 NIPGLLVFDLPVHGDNRGWFKENWQRAKMLELGLPDFGPVQNNISFNAKKGVTRGIHAE- 74
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G IF VD+R + + + IY+P G + F LE
Sbjct: 75 ---PWDKYISIATGEIFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALE 128
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 129 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEESERSEADLHHPMLKDAK 186
>gi|309802229|ref|ZP_07696337.1| putative dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium
JCVIHMP022]
gi|308221112|gb|EFO77416.1| putative dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium
JCVIHMP022]
Length = 482
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + ELGL D VQ+N SF+ G RG+H +
Sbjct: 13 NIPGLLVFDLPVHGDNRGWFKENWQRAKMLELGLPDFGPVQNNISFNAKKGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G IF VD+R + + + IY+P G + F LE
Sbjct: 72 ---PWDKYISIATGEIFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 126 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEESERSEADLHHPMLKDAK 183
>gi|320095968|ref|ZP_08027584.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977099|gb|EFW08826.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 472
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + D+RGWF + + + + LGL VQ+N SF+ + G RG+H +
Sbjct: 15 IPGFLRIDLTVHGDNRGWFKENWQREKMVGLGLPDFRPVQNNISFNDEVGVTRGIHAE-- 72
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR+F VD+R + ++ + G +++P G + + TLE
Sbjct: 73 --PWDKFVSVATGRVFGAWVDLREGPSFGTVYTTVI---DPGTAVFVPKGVGNAYQTLEP 127
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T Y V +S + + D+++ + WP+ +S+KD+ P L + +PF
Sbjct: 128 ATAYTYLVNAHWSPDARYTFLNLADETVAVPWPIP-LERAVLSDKDRAHPRLADV-TPF 184
>gi|23464835|ref|NP_695438.1| fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
in rhamnose biosynthesis [Bifidobacterium longum
NCC2705]
gi|23325419|gb|AAN24074.1| possible fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
in rhamnose biosynthesis [Bifidobacterium longum
NCC2705]
Length = 480
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 13 NIPGLIVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNAKKGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G +F VD+R + ++ + IY+P G + F LE
Sbjct: 72 ---PWDKYISIATGSVFGAWVDLRPGDSFGQVYTTVL---DPSKAIYVPRGVGNSFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 126 DGTAYTYLVNAHWSLEQKKTYTFVNLADPDLNIQWPIPLEDS-ERSEADLHHPMLRDAK 183
>gi|220913157|ref|YP_002488466.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter chlorophenolicus A6]
gi|219860035|gb|ACL40377.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter chlorophenolicus A6]
Length = 474
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + D+RGWF + + + + LGL VQ+N SF+ GT RG+H +
Sbjct: 16 IPGVVLYDLPVHGDNRGWFKENWQREKMVALGLPDFRPVQNNISFNEKAGTTRGIHAE-- 73
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + GRIF VD+R + I+IP G + F TLE
Sbjct: 74 --PWDKFISVATGRIFGAWVDLREGP---SFGAVFTAELDPSQAIFIPRGVGNAFQTLED 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
NT Y V D +S + + D++ ++WP+ +S+KD+ P + +
Sbjct: 129 NTAYTYLVNDHWSADAQGQYTFLNLADETAAVSWPIP-LDQAELSDKDKAHPRMADV 184
>gi|210633568|ref|ZP_03297812.1| hypothetical protein COLSTE_01729 [Collinsella stercoris DSM 13279]
gi|210159103|gb|EEA90074.1| hypothetical protein COLSTE_01729 [Collinsella stercoris DSM 13279]
Length = 237
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I ++++ DSRGWF + + + LG+ VQ+N S++ G RG+H +
Sbjct: 17 IGGLKVVDLAVHGDSRGWFKENWQRAKMCALGVPDFRIVQNNISYNDRKGVTRGIHAE-- 74
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + G +F VD+R S TYG + + + IY+P G + F LE
Sbjct: 75 --PWDKFISVARGSVFGAWVDLREGSATYGKVYTTVLDPSK--AIYVPRGVGNSFQALED 130
Query: 122 NTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S E V D ++ I WP+ +VSE D N P L +
Sbjct: 131 GTAYTYLVNAHWSAELKGTYTFVNLADPALGIEWPIP-LGEATVSEADLNHPMLADV 186
>gi|139439925|ref|ZP_01773277.1| Hypothetical protein COLAER_02315 [Collinsella aerofaciens ATCC
25986]
gi|133774775|gb|EBA38595.1| Hypothetical protein COLAER_02315 [Collinsella aerofaciens ATCC
25986]
Length = 484
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQRP 61
I ++++ DSRGWF + + + LG+ D VQ+N S++ G RG+H +
Sbjct: 17 IVGLKVVDLAVHGDSRGWFKENWQRAKMTALGIPDLRVVQNNVSYNDSRGVTRGIHAE-- 74
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + G +F VD+R S T+G + + + IY+P G + F LE
Sbjct: 75 --PWDKFISVARGSVFGAWVDLREGSETFGKVFTTVLDPSK--AIYVPRGVGNSFQALED 130
Query: 122 NTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S+E V D ++I WP+ +VSE D N P L +
Sbjct: 131 GTAYTYLVDAHWSLELKRTYTFVNLADPELNIQWPIP-LDQATVSEADLNHPMLRDV 186
>gi|227546956|ref|ZP_03977005.1| fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
in rhamnose biosynthesis [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212557|gb|EEI80445.1| fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
in rhamnose biosynthesis [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 476
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNAKKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIATGEIFGAWVDLRPGDSFGQVFTTRL---DPSKAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ + SE D + P L
Sbjct: 128 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LVDSERSEADLHHPMLKDAK 185
>gi|237746138|ref|ZP_04576618.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
HOxBLS]
gi|229377489|gb|EEO27580.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Oxalobacter formigenes
HOxBLS]
Length = 182
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I VRI+ F + G+F +T+ K LG F ++ + + I GL +Q P
Sbjct: 8 IPDVRIVVPAVFRNGEGFFPETFDLDAFRKALGKPVGFAEEIQTHTGRHELI-GLRYQMP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QA+LV + G++F +AVD+R++SPT+ WV +S NG + +IP GFA G +TL
Sbjct: 67 PCVQARLVHVVNGQVFHVAVDLRKSSPTFSRWVGTVLSDENGYRFWIPEGFASGLVTLSD 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+++ + T Y + + W D ++ I W I P VSE D L++ D
Sbjct: 127 FADIVAQTTRPYCKASERCIRWDDPAVAIDW--HGIIAPRVSECDLKGRLLDEAD 179
>gi|295856706|gb|ADG46994.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum subsp.
longum]
Length = 483
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIAAGEIFGAWVDLRPGESFGQVFTTRL---DPSKAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D + I WP+ SE D + P L
Sbjct: 128 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELGIEWPIP-LEESERSEADLHHPMLRDAK 185
>gi|331695741|ref|YP_004331980.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326950430|gb|AEA24127.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 180
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQR 60
+I+ V + F D RG F++T+ + + E G+ QD+ S S+ R
Sbjct: 7 DIDGVLLFVPTPFRDGRGLFTRTFDTAIAAEHGVDLGPRAQDSQSRSWRGTVRGM--HGR 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+AKLVR G + D+ VD R +SPT+G + + + +Y+P G HGF L
Sbjct: 65 RGRGEAKLVRAAHGAVHDVLVDARPSSPTFGVVAAFRLDDEDFHHLYVPPGLLHGFQALT 124
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+V Y++ + D GVA D + I WPL +S++D+ ++
Sbjct: 125 DVADVCYRIDRPHDPSEDVGVAHDDPDLAIAWPLPLGP---ISDRDRAAGSWAEL 176
>gi|322691989|ref|YP_004221559.1| dTDP-4-dehydrorhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium longum subsp. longum JCM 1217]
gi|320456845|dbj|BAJ67467.1| dTDP-4-dehydrorhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium longum subsp. longum JCM 1217]
Length = 484
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIAAGEIFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D + I WP+ SE D + P L
Sbjct: 128 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELGIEWPIP-LEESERSEADLHHPMLRDAK 185
>gi|23016873|ref|ZP_00056625.1| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Magnetospirillum magnetotacticum MS-1]
Length = 186
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 85/171 (49%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + ++ D RGW + + ++ GL + Q F+ T++GLH Q P
Sbjct: 8 IKGIFDVELDPAADHRGWLIKPFDARPFAAAGLTAEWRQVIVQFTEHKNTLKGLHHQAEP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ +AKL+ I GR F ++VD+R SPT+G W + A+ +Y+ GFAHG +TL +
Sbjct: 68 FLEAKLIAPIEGRCFWVSVDLRHESPTFGQWGGAVLDADKRNSLYVSRGFAHGCLTLSDH 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
++ + YS +H +AW D + I WPLL + + ++ P
Sbjct: 128 VNLLICADNDYSPDHGVSIAWNDPTFAIDWPLLADTEVVMKAEHRDAPPFA 178
>gi|294673197|ref|YP_003573813.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella ruminicola 23]
gi|294473828|gb|ADE83217.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella ruminicola 23]
Length = 189
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ ++ D RG F + Y+ + K G++ + ++ S G IR +HFQ
Sbjct: 10 LDLKGAYKIQPFYATDERGGFVKDYNIDMFKANGIEHELKEVFYTISKR-GVIRAMHFQL 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLVRC++G ++D+ D+R +SPT+G W ++ +N +++YIP F HG++ +E
Sbjct: 69 VKQQA-KLVRCVSGHVYDVIADLRPDSPTFGQWRGFHLTGDNQVELYIPQYFGHGYLVIE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP---LLDTILPSVSEKDQNLPFLNQIDS 177
+ V YK + + E DSG+ + D + I WP + +SEKD+NL ++
Sbjct: 128 D-SVVSYKCGEVFYGEGDSGIMYNDPDLAIEWPMDLIGGEEKLIISEKDKNLMSFKDYNN 186
>gi|312133747|ref|YP_004001086.1| rfbc [Bifidobacterium longum subsp. longum BBMN68]
gi|311773025|gb|ADQ02513.1| RfbC [Bifidobacterium longum subsp. longum BBMN68]
Length = 475
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + +LGL D VQ+N SF+ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMLKLGLPDFGPVQNNISFNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G IF VD+R + + + IY+P G + F LE
Sbjct: 74 ---PWDKYISIATGEIFGAWVDLRPGESFGQVFTTRL---DPSRAIYVPRGVGNSFQALE 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 128 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEESERSEADLHHPMLKDAK 185
>gi|311063528|ref|YP_003970253.1| RmlC/RmlD dTDP-4-dehydrorhamnose
3,5-epimerase/dTDP-4-dehydrorhamnose reductase
[Bifidobacterium bifidum PRL2010]
gi|310865847|gb|ADP35216.1| RmlC/RmlD dTDP-4-dehydrorhamnose
3,5-epimerase/dTDP-4-dehydrorhamnose reductase
[Bifidobacterium bifidum PRL2010]
Length = 476
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNAKKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKFISIATGEIFGAWVDLRPGDSFGQVFTTRL---DPSKAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 128 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIPLEDS-ERSEADLHHPMLKDAK 185
>gi|210633778|ref|ZP_03297849.1| hypothetical protein COLSTE_01766 [Collinsella stercoris DSM 13279]
gi|210159077|gb|EEA90048.1| hypothetical protein COLSTE_01766 [Collinsella stercoris DSM 13279]
Length = 237
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQRP 61
I ++++ DSRGWF + + + LG+ D VQ+N S++ G RG+H +
Sbjct: 17 IGGLKVVDLAVHGDSRGWFKENWQRAKMTALGIPDLRVVQNNISYNDSRGVTRGIHAE-- 74
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + G +F VD+R S T+G + + + IY+P G + F LE
Sbjct: 75 --PWDKFISVARGSVFGAWVDLREGSETFGKVFTTVLDPSK--AIYVPRGVGNSFQALED 130
Query: 122 NTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S+E V D + I WP+ +VS+ D N P L +
Sbjct: 131 GTAYTYLVDAHWSLELKRTYTFVNLADPELAIEWPIP-LDEATVSDADLNHPMLKDV 186
>gi|4240427|gb|AAD13558.1| NDP-hexose 3,5-epimerase homolog [Streptomyces cyanogenus]
Length = 192
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 2 NINPVRILKT-RKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ V +L +D RG F ++ + LL++ +G Q N+S S +RG+H
Sbjct: 7 KVPGVHVLAPWTGSKDERGAFFESLRTDLLQDVVGHPFEVKQINYSVSRRNH-LRGIHSV 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G D VD+R SPT+G + + A +G +YIP G HGF+TL
Sbjct: 66 TSPPGQAKYVSCVRGAFRDFVVDLRVGSPTFGQYDVNLLDAASGRALYIPEGVGHGFLTL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ + Y ++ Y + D + + W + P +SEKD+ L
Sbjct: 126 TEDACICYVLSSTYVPGTQIDIDPLDPDLALPWGFTEP--PLISEKDRTARSLA 177
>gi|296159913|ref|ZP_06842734.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. Ch1-1]
gi|295889896|gb|EFG69693.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia sp. Ch1-1]
Length = 198
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++++ R D+ G ++ + +E FVQ+ H+ + + GLH+Q
Sbjct: 10 IRDVKLIEPRIVSDTHGVSFDSFDQEDFEEHVARGYRFVQERHAV-YPHNVLCGLHYQIQ 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G + ++AVD+RR SPT+G ++S +SA N Q+++P GFAHGF+ L
Sbjct: 69 R-PQGKLVRVVNGEVANVAVDLRRWSPTFGRYISTRLSAANCRQLWVPPGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
EV+ K T+ EH+ + W D I I W L P SE+D + + Y
Sbjct: 128 VAEVLCKTTERGLTEHERTLQWDDPDIAIEWDL--NTAPITSERDSVGTRFSMAE---VY 182
Query: 182 DGLPLLSL 189
P +
Sbjct: 183 RQKPPFAQ 190
>gi|307707842|ref|ZP_07644319.1| dTDP-4-dehydrorhamnose 3,5-epimerase subfamily, putative
[Streptococcus mitis NCTC 12261]
gi|307616102|gb|EFN95298.1| dTDP-4-dehydrorhamnose 3,5-epimerase subfamily, putative
[Streptococcus mitis NCTC 12261]
Length = 450
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQD---NHSFSFDCGTIRGLHFQ 59
I + + ++ D RG+F + + K L G+ + F N+ G IRG+H Q
Sbjct: 11 IQGLLVFESPLHHDERGYFLENWRKKDLLANGVPESFFHHKLQNNVSVSKQGVIRGMHCQ 70
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
KL+ G I +D+R +SPTY +++ +++P G A+G +L
Sbjct: 71 GYE----KLMTVAYGTFKMIFIDLRIDSPTYKSVDVIDVQPGR--AVFVPGGVANGAQSL 124
Query: 120 EMNTEVIYKVTDFYSV-EHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
N + Y V D+Y ++ G+ DK +++W + P +SEKDQ ++
Sbjct: 125 VNNGILNYLVADYYDPHKNYLGITPLDKDANLSW--DSLLKPIISEKDQAAKSFKEV 179
>gi|288963060|ref|YP_003453339.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azospirillum sp. B510]
gi|288915312|dbj|BAI76795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Azospirillum sp. B510]
Length = 169
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 2 NINPVRILKT-RKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
++ V + +FED RG + + Y+ +L + G+ F+QD+ S S +RGLH
Sbjct: 7 KLDGVLAIDPPTRFEDFRGEYVELYNKELYHQAGITQDFIQDDISVSSM-NVLRGLHGDA 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLV + GR + + V+ SP Y W + +S N QI IP F +G + +
Sbjct: 66 ---KTWKLVSALVGRFYLVVVNWDETSPQYRMWEAFTLSDRNRRQILIPPKFGNGHLVMS 122
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLP 170
YK T Y E + W DK + I WP+ P +S +D +P
Sbjct: 123 EYCVFHYKQTTTYERESQFTIHWDDKDVGIYWPV---QSPILSMRDAGVP 169
>gi|254496079|ref|ZP_05108980.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella drancourtii
LLAP12]
gi|254354721|gb|EET13355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Legionella drancourtii
LLAP12]
Length = 166
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 5/145 (3%)
Query: 22 SQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA 80
++++ + E G FVQDNHS S +RGLH+Q AQ KLVR +AG +FD+A
Sbjct: 1 MESFNQRRFDEAVGYPVQFVQDNHSRSAK-NVLRGLHYQIKQ-AQGKLVRVVAGEVFDVA 58
Query: 81 VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSG 140
VD+RRNSPT+G WV ++A N Q++IP GFAHGF+ L + E++YK TDF++ E++
Sbjct: 59 VDVRRNSPTFGQWVGEILTAKNYKQLWIPEGFAHGFVVLSDSAELLYKTTDFWAPEYEQC 118
Query: 141 VAWQDKSIDITWPLLDTILPSVSEK 165
+AW D + I WP +P +S+K
Sbjct: 119 IAWDDPELAIAWPF--AGMPQLSKK 141
>gi|62511695|gb|AAX84436.1| RfbD [Xylella fastidiosa]
gi|62511699|gb|AAX84438.1| RfbD [Xylella fastidiosa]
Length = 143
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV +
Sbjct: 1 FDDARGEFFEAWNAECFERQGMSSRFVQSNVSISMY-GVLRGLHYQWPR-PQGKLVGVLE 58
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
G ++D+AVDIR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD Y
Sbjct: 59 GEVYDVAVDIRLGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDVY 118
Query: 134 SVEHDSGVAWQDKSIDITWPL 154
E D+G+ W D + + WP+
Sbjct: 119 VKEADAGIRWNDAVLGVDWPI 139
>gi|225352522|ref|ZP_03743545.1| hypothetical protein BIFPSEUDO_04145 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156716|gb|EEG70110.1| hypothetical protein BIFPSEUDO_04145 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 473
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 13 NIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNAKKGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G +F VD+R + ++ + IY+P G + F LE
Sbjct: 72 ---PWDKYISIATGSVFGAWVDLRPGESFGQVYTTVL---DPSKAIYVPRGVGNSFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D +DI WP+ SE D P L
Sbjct: 126 DGTAYTYLVNAHWSLEQKKTYTFVNLADPDLDIQWPIP-LDEAERSEADLKHPMLRDAK 183
>gi|323357015|ref|YP_004223411.1| dTDP-4-dehydrorhamnose reductase [Microbacterium testaceum StLB037]
gi|323273386|dbj|BAJ73531.1| dTDP-4-dehydrorhamnose reductase [Microbacterium testaceum StLB037]
Length = 469
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 12/177 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGL---QDVFVQDNHSFSFDCGTIRGLHFQ 59
I + +L D+RGWF + + + + G+ VQ+N SF+ GT RG+H +
Sbjct: 16 IPGLILLDLPVHGDTRGWFKENWQREKMLAAGIDLPDFGPVQNNISFNDAAGTTRGIHAE 75
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
K V GRIF VD+R + I++P G + + TL
Sbjct: 76 ----PWDKYVSVATGRIFGAWVDLREGD---TFGAVFTAELDASTAIFVPRGVGNSYQTL 128
Query: 120 EMNTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T Y V D +S + + D++ I WP+ + +S KD P L +
Sbjct: 129 EPDTAYTYLVNDHWSPDATYTFLNLADETAAIAWPIPLDSV-EISAKDLQHPRLADV 184
>gi|62511683|gb|AAX84430.1| RfbD [Xylella fastidiosa]
gi|62511685|gb|AAX84431.1| RfbD [Xylella fastidiosa]
gi|62511687|gb|AAX84432.1| RfbD [Xylella fastidiosa]
gi|62511689|gb|AAX84433.1| RfbD [Xylella fastidiosa]
gi|62511691|gb|AAX84434.1| RfbD [Xylella fastidiosa]
gi|62511693|gb|AAX84435.1| RfbD [Xylella fastidiosa]
Length = 143
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV +
Sbjct: 1 FDDARGEFFEAWNAECFERQGMSSRFVQSNVSISMY-GVLRGLHYQWPR-PQGKLVGVLE 58
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD Y
Sbjct: 59 GEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDVY 118
Query: 134 SVEHDSGVAWQDKSIDITWPL 154
E D+G+ W D I + WP+
Sbjct: 119 VKEADAGIRWNDAVIGVDWPI 139
>gi|238062701|ref|ZP_04607410.1| 3,5-epimerase [Micromonospora sp. ATCC 39149]
gi|237884512|gb|EEP73340.1| 3,5-epimerase [Micromonospora sp. ATCC 39149]
Length = 200
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQ 59
+ + + D RG F Y L ++ +F S+S T+RGLHF
Sbjct: 6 LTVEGAYAFAPTVYPDYRGVFLSPYLDSLFRDTVGYPLFPVRQTSYSVSRRGTLRGLHFT 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
R P AK V C GR+ D+ +D+R SPT+G W S+ + + +Y+P G AH F+ L
Sbjct: 66 RTPPGTAKFVSCPHGRVLDLVLDVRVGSPTFGKWDSVVLDSEEFQAVYLPVGVAHMFVAL 125
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+T + Y ++ Y E++ + D + + P+ + + P +SE+D+ +Q
Sbjct: 126 ADDTVMSYVLSQEYVFENELALDALDPGLGL--PIPEDVEPILSERDRTAITFDQA 179
>gi|120400390|gb|ABM21444.1| sugar biosynthesis protein [Lactobacillus johnsonii]
Length = 171
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 22 SQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAV 81
+T++ + + + G FVQDN S S G +RGLHFQ Y Q KLVR + G +FD+AV
Sbjct: 1 METFNQRDMMDAGFSINFVQDNQS-SSTKGVLRGLHFQ-KKYPQIKLVRAVRGSVFDVAV 58
Query: 82 DIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGV 141
D+R +S TYG W +E++A N Q IP GFAHGF+ L E YKV DF+ + G+
Sbjct: 59 DLRSDSKTYGKWYGVELTAENKKQFLIPQGFAHGFLVLSDEAEFCYKVNDFWHPNDEGGM 118
Query: 142 AWQDKSIDITWP----------------LLDTILPSVSEKDQNLPFLNQ 174
AW D I I WP L D ++S++DQ L
Sbjct: 119 AWNDPEIGIEWPHLKGDYPGSPDASGYTLDDGTKLTLSDRDQEWKGLKD 167
>gi|19551582|ref|NP_599584.1| dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme
[Corynebacterium glutamicum ATCC 13032]
gi|62389231|ref|YP_224633.1| dTDP-4-dehydrorhamnose 3,5-epimerase, dTDP-dehydrorhamnose
reductase [Corynebacterium glutamicum ATCC 13032]
gi|21323098|dbj|BAB97726.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Corynebacterium glutamicum ATCC 13032]
gi|41324565|emb|CAF19047.1| DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, dtdp-dehydrorhamnose
reductase [Corynebacterium glutamicum ATCC 13032]
Length = 453
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
+I + + D+RGWF + + + LGL D VQ+N SF+ GT RG+H +
Sbjct: 13 DIEGLLVFDFPVHGDNRGWFKENWQRTKMTNLGLPDFGPVQNNMSFNATAGTTRGMHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K V G +F VD+R S TYG V+ +I+ + +Y+P G A+GF LE
Sbjct: 72 ---PWDKFVSVAVGSVFGAWVDLRAGSSTYGNVVTQKITPDV--GVYVPRGVANGFQALE 126
Query: 121 MNTEVIYKVTDFYSVE-HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V D +S + H + V I WPL + +SEKD+ P L
Sbjct: 127 DGTLYTYLVNDHWSPDAHYANVNLN----MIDWPLP---ITEISEKDKKHPALIDA 175
>gi|62361812|gb|AAX81442.1| RfbD [Xylella fastidiosa]
gi|62511697|gb|AAX84437.1| RfbD [Xylella fastidiosa]
gi|62511701|gb|AAX84439.1| RfbD [Xylella fastidiosa]
gi|62511703|gb|AAX84440.1| RfbD [Xylella fastidiosa]
gi|62511705|gb|AAX84441.1| RfbD [Xylella fastidiosa]
gi|62511707|gb|AAX84442.1| RfbD [Xylella fastidiosa]
gi|62511709|gb|AAX84443.1| RfbD [Xylella fastidiosa]
gi|62511713|gb|AAX84445.1| RfbD [Xylella fastidiosa]
Length = 143
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 61/141 (43%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV +
Sbjct: 1 FDDARGEFFEAWNAECFERQGMSSRFVQSNVSISMY-GVLRGLHYQWPR-PQGKLVGVLE 58
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
G ++D+AVDIR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD Y
Sbjct: 59 GEVYDVAVDIRLGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDVY 118
Query: 134 SVEHDSGVAWQDKSIDITWPL 154
E D+G+ W D I + WP+
Sbjct: 119 VKEADAGIRWNDAVIGVDWPI 139
>gi|91781102|ref|YP_556309.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
gi|91693762|gb|ABE36959.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
Length = 182
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V++++ D RG ++ +E FVQ+ HS S + GLH+Q
Sbjct: 9 EIRDVKLIEPCILSDMRGVSFDSFDQDEFEERVARGYRFVQERHSVSLH-NVLCGLHYQI 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVR + G +FD+AVD+RR SPT+G W+S +SA+N Q++IP GFAHGF L
Sbjct: 68 QR-PQGKLVRVVNGEVFDVAVDLRRWSPTFGRWISARLSASNCRQLWIPPGFAHGFRVLS 126
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+ K T+ VEH+ + W D I I+W L + P S +D + +
Sbjct: 127 DVAEVLCKTTERGFVEHERTLQWDDPDIAISWDLDE--APITSTRDAAGTSFSTAE 180
>gi|111022708|ref|YP_705680.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus jostii RHA1]
gi|110822238|gb|ABG97522.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus jostii RHA1]
Length = 184
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-----GLQDVFVQDNHSFSFDCGTIRGL 56
+ VR+ + + D RG F++T+ + E L F+QD+ S S+ G +RG+
Sbjct: 7 ELTDVRVFRPVPYRDDRGLFTRTFEAGQFDEHMSETGILAADFLQDSQSRSWR-GVVRGM 65
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + +AKLVRC G I+D+ VDIRR SPT+G + + + +Y+P GF HGF
Sbjct: 66 HGR-ANPGEAKLVRCAHGAIYDVLVDIRRGSPTFGQKEAFRLDDVDFAHLYVPPGFLHGF 124
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
L +V Y++ + D VA D S+ ITWPL + +S++D
Sbjct: 125 QALTEVADVCYRIDREHDPTADIAVAHDDPSLAITWPLP---VSLISDRDAAA 174
>gi|284174226|ref|ZP_06388195.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus solfataricus 98/2]
gi|261603035|gb|ACX92638.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfolobus solfataricus 98/2]
Length = 177
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
+ ++K F D RG+F + Y S + + +Q N SFS G IRGLH+Q P
Sbjct: 11 GIVLIKPTVFPDKRGFFLELYKSTDFVNIPIP---IQTNMSFSIK-GVIRGLHYQISPKE 66
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
Q K+V GRI D+AVDIR++S T+G +VS+E++ N ++IP GFAHGF LE +
Sbjct: 67 QGKIVFVPKGRILDVAVDIRKSSKTFGKYVSVELNEENHYLLWIPPGFAHGFQALEDSIV 126
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ + + YS +H+ + + I WP+ + +S+KD P + + +
Sbjct: 127 IYFITHNQYSPKHERCINY--SYIK-DWPIKE---AILSDKDLQCPPIEKAE 172
>gi|62511665|gb|AAX84421.1| RfbD [Xylella fastidiosa]
gi|62511667|gb|AAX84422.1| RfbD [Xylella fastidiosa]
gi|62511669|gb|AAX84423.1| RfbD [Xylella fastidiosa]
gi|62511671|gb|AAX84424.1| RfbD [Xylella fastidiosa]
gi|62511673|gb|AAX84425.1| RfbD [Xylella fastidiosa]
gi|62511675|gb|AAX84426.1| RfbD [Xylella fastidiosa]
gi|62511677|gb|AAX84427.1| RfbD [Xylella fastidiosa]
gi|62511679|gb|AAX84428.1| RfbD [Xylella fastidiosa]
gi|62511681|gb|AAX84429.1| RfbD [Xylella fastidiosa]
Length = 143
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F+D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV +
Sbjct: 1 FDDARGEFFEVWNAECFEHQGMSSRFVQSNVSISIY-GVLRGLHYQWPR-PQGKLVGVLE 58
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
G ++D+AVDIRR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD Y
Sbjct: 59 GEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDVY 118
Query: 134 SVEHDSGVAWQDKSIDITWPL 154
E D+G+ W D I + WP+
Sbjct: 119 VKEADAGIRWNDAVIGVDWPI 139
>gi|84683922|ref|ZP_01011824.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667675|gb|EAQ14143.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodobacterales bacterium
HTCC2654]
Length = 193
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + L D RG+F +T+ L+ E+G VF Q NHS S T+RG +
Sbjct: 22 IKGLWRLIPEPAGDERGFFVETFRQSLIASEMGRPYVFAQSNHSRS-VARTLRGFRTE-- 78
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEI--SANNGLQIYIPTGFAHGFMTL 119
K + G + VD R +SPTY + I + + +I + G A+ F L
Sbjct: 79 --PWDKAIYVTRGTALVVVVDPRPDSPTYREHETFLIGDAPGDRHRIVVSRGLANAFYCL 136
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ + V++ Y G W + I WP P +S+ D NLP +
Sbjct: 137 TD-VDYVNDVSEEYRPTGRRGFHWSAPGLGIDWP---DTTPILSDADANLPSFD 186
>gi|145294461|ref|YP_001137282.1| hypothetical protein cgR_0416 [Corynebacterium glutamicum R]
gi|140844381|dbj|BAF53380.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 450
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
+I + + D+RGWF + + + LGL D VQ+N S++ GT RG+H +
Sbjct: 12 DIEGLLVFDFPVHGDNRGWFKENWQRTKMTNLGLPDFGPVQNNMSYNATAGTTRGMHAE- 70
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K V G +F VD+R S TYG V+ +I+ + +Y+P G A+GF LE
Sbjct: 71 ---PWDKFVSVAVGSVFGAWVDLRAGSSTYGNVVTQKITPDV--GVYVPRGVANGFQALE 125
Query: 121 MNTEVIYKVTDFYSVE-HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
T Y V D +S + H + V I WPL + +SEKD+ P L+
Sbjct: 126 DGTLYTYLVNDHWSPDAHYANVNLN----MIDWPLP---ITEISEKDKKHPTLD 172
>gi|91778373|ref|YP_553581.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
gi|91691033|gb|ABE34231.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia xenovorans
LB400]
Length = 182
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELG-LQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V++++ R D+ G ++ + +E FVQ+ H+ + + GLH+Q
Sbjct: 10 IRDVKLIEPRIVSDTHGVSFDSFDQEDFEEHVARGYRFVQERHAV-YPYNVLCGLHYQIQ 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q KLVR + G + ++AVD+RR SPT+G ++S +SA N Q+++P GFAHGF+ L
Sbjct: 69 R-PQGKLVRVVNGEVVNVAVDLRRWSPTFGRYISTRLSAANCRQLWVPPGFAHGFLVLSD 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
EV+ K T+ EH+ + W D I I W L P +SE+D + +
Sbjct: 128 VAEVLCKTTERGLAEHERTLQWDDPDIAIEWDL--NTAPIISERDSLGTRFSMAE 180
>gi|291457003|ref|ZP_06596393.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium breve DSM 20213]
gi|291381414|gb|EFE88932.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium breve DSM 20213]
Length = 483
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N S++ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMMGLGLPDFGPVQNNISYNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG +F VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIAAGEVFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 128 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEESERSEADLHHPMLKDAK 185
>gi|170516928|gb|ACB15402.1| RmlCD [Bifidobacterium longum]
Length = 483
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N S++ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMMGLGLPDFGPVQNNISYNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIAAGEIFGAWVDLRPGESFGQVYTTRL---DPSRAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 128 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEESERSEADLHHPMLKDAK 185
>gi|23335975|ref|ZP_00121205.1| COG1091: dTDP-4-dehydrorhamnose reductase [Bifidobacterium longum
DJO10A]
gi|189440431|ref|YP_001955512.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum
DJO10A]
gi|189428866|gb|ACD99014.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum
DJO10A]
Length = 483
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N S++ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMMGLGLPDFGPVQNNISYNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIAAGEIFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 128 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEESERSEADLHHPMLKDAK 185
>gi|62511711|gb|AAX84444.1| RfbD [Xylella fastidiosa]
Length = 141
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/139 (43%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 16 DSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGR 75
D+RG F + ++++ + G+ FVQ N S S G +RGLH+Q P Q KLV + G
Sbjct: 1 DARGEFFEAWNAECFERQGMSSRFVQSNVSISMY-GVLRGLHYQWPR-PQGKLVGVLEGE 58
Query: 76 IFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSV 135
++D+AVDIR SP YG WV++ +SA N Q++IP GFAHGF+ L Y TD Y
Sbjct: 59 VYDVAVDIRLGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFVVLSERAVFNYLCTDVYVK 118
Query: 136 EHDSGVAWQDKSIDITWPL 154
E D+G+ W D I + WP+
Sbjct: 119 EADAGIRWNDAVIGVDWPI 137
>gi|310286574|ref|YP_003937832.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose
reductase [Bifidobacterium bifidum S17]
gi|309250510|gb|ADO52258.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose
reductase [Bifidobacterium bifidum S17]
Length = 482
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 13 NIPGLIVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNAKKGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G +F VD+R + + + IY+P G + F LE
Sbjct: 72 ---PWDKYISIATGAVFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S+E V D +DI WP+ SE D + P L
Sbjct: 126 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELDIQWPIP-LEESERSEADLHHPMLRDA 182
>gi|224284002|ref|ZP_03647324.1| fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
[Bifidobacterium bifidum NCIMB 41171]
gi|313141153|ref|ZP_07803346.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum NCIMB
41171]
gi|313133663|gb|EFR51280.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum NCIMB
41171]
Length = 482
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 13 NIPGLIVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNAKKGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G +F VD+R + + + IY+P G + F LE
Sbjct: 72 ---PWDKYISIATGAVFGAWVDLRPGESFGQVYTTRL---DPSKAIYVPRGVGNSFQALE 125
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S+E V D +DI WP+ SE D + P L
Sbjct: 126 DGTAYTYLVNAHWSLEQKKTYTFVNLADPELDIQWPIP-LEESERSEADLHHPMLRDA 182
>gi|154488287|ref|ZP_02029404.1| hypothetical protein BIFADO_01861 [Bifidobacterium adolescentis
L2-32]
gi|154083438|gb|EDN82483.1| hypothetical protein BIFADO_01861 [Bifidobacterium adolescentis
L2-32]
Length = 483
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + LGL D VQ+N SF+ G RG+H +
Sbjct: 16 NIPGLVVFDLPVHGDNRGWFKENWQRAKQTALGLPDFGPVQNNISFNAKKGVTRGIHAE- 74
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG +F VD+R + ++ + IY+P G + F LE
Sbjct: 75 ---PWDKYISIAAGSVFGAWVDLRPGDSFGQVYTTIL---DPSKAIYVPRGVGNSFQALE 128
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D +DI WP+ SE D + P L
Sbjct: 129 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELDIQWPIPLEDS-ERSEADLHHPMLKDAK 186
>gi|134097320|ref|YP_001102981.1| dTDP-4-deoxyglucose 3,5-epimerase [Saccharopolyspora erythraea NRRL
2338]
gi|133909943|emb|CAM00055.1| dTDP-4-deoxyglucose 3,5-epimerase [Saccharopolyspora erythraea NRRL
2338]
Length = 200
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+ + +D RG F + +G + Q NH S G +RGLHF
Sbjct: 6 LAVAGGFEFTPDPKQDRRGLFVSPLQDEAFVGAVGHRFPVAQMNHIVSAR-GVLRGLHFT 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P Q K V C GR D+ VDIR SPT+G W ++E+ + +Y P G AH F+ L
Sbjct: 65 TTPPGQCKYVYCARGRALDVIVDIRVGSPTFGKWDAVEMDTEHFRAVYFPRGTAHAFLAL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
E +T + Y V+ Y E++ + D ++ + WP + +S++D L
Sbjct: 125 EDDTLMSYLVSTPYVAEYEQAIDPFDPALGLPWP--ADLEVVLSDRDTVAVDLE 176
>gi|317482685|ref|ZP_07941699.1| RmlD substrate binding domain-containing protein [Bifidobacterium
sp. 12_1_47BFAA]
gi|322690053|ref|YP_004209787.1| dTDP-4-dehydrorhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium longum subsp. infantis 157F]
gi|291516583|emb|CBK70199.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium longum subsp.
longum F8]
gi|316915931|gb|EFV37339.1| RmlD substrate binding domain-containing protein [Bifidobacterium
sp. 12_1_47BFAA]
gi|320461389|dbj|BAJ72009.1| dTDP-4-dehydrorhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Bifidobacterium longum subsp. infantis 157F]
Length = 483
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N S++ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMMGLGLPDFGPVQNNISYNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIAAGEIFGAWVDLRPGESFGQVFTTRL---DPSRAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D ++I WP+ SE D + P L
Sbjct: 128 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIP-LEESERSEADLHHPMLKDAK 185
>gi|308235687|ref|ZP_07666424.1| fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
[Gardnerella vaginalis ATCC 14018]
gi|311114284|ref|YP_003985505.1| bifunctional dTDP-4-keto-L-rhamnose
reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
[Gardnerella vaginalis ATCC 14019]
gi|310945778|gb|ADP38482.1| fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
in rhamnose biosynthesis [Gardnerella vaginalis ATCC
14019]
Length = 480
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 13 NIPGLIVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNEKRGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + G +F VD+R + + N IY+P G + F L+
Sbjct: 72 ---PWDKYISIATGEVFGAWVDLRPGKSFGQVYTTTL---NPSKAIYVPRGVGNSFQALQ 125
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D + I WP+ SE D + P L
Sbjct: 126 DGTAYTYLVNAHWSLEQKKTYTFVNLADPDLHINWPIP-LEESERSEADLHHPMLKNAK 183
>gi|6002931|gb|AAF00208.1|AF164960_4 epimerase [Streptomyces fradiae]
Length = 202
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 5/176 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M+I ++ + D RG F + L + +G+ Q N+S S T+RG+H
Sbjct: 1 MSIPGAFLITPDQLSDERGAFYELRCDMLERAVGVPFQPQQINYSVSKRH-TLRGIHSVS 59
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P QAKLV C+ G + DI VD+R SP +G E+ A +G +Y+P +
Sbjct: 60 IPPGQAKLVTCVRGALRDIVVDLRIGSPAFGAHQVTELDAVSGRSVYVP-EVWGTDSSRS 118
Query: 121 MNTEVIYKVT-DFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T V + Y + D +D+ W P +SEKD L +
Sbjct: 119 PTTPVSATSSPSTYVPGTQIDINPLDPDLDLPW--DCPQEPLISEKDAKASSLAEA 172
>gi|325261272|ref|ZP_08128010.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. D5]
gi|324032726|gb|EGB94003.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. D5]
Length = 193
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ ++ K D RG F + YS L + G+ + ++ S G IR LHFQR
Sbjct: 10 LDLEGAYLIHPFKATDIRGEFIKDYSLSLFNDNGITHNLKEVFYTVSHK-GVIRALHFQR 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
QAKLVRCI+GRI+D+ VD+R S T+ W ++ N ++ IP FAHG++ LE
Sbjct: 69 VK-EQAKLVRCISGRIYDVIVDLRPESKTFMQWRGFNLTGENCWELLIPQHFAHGYLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQI 175
+ V YK + + E+D G+ W D I + WP+ + +++KD+ L +
Sbjct: 128 D-SIVSYKCAEAFYWEYDDGIMWNDPDIAVDWPIQEIGGNENLILADKDKVLQSFKEF 184
>gi|317482611|ref|ZP_07941626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium sp.
12_1_47BFAA]
gi|316916033|gb|EFV37440.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium sp.
12_1_47BFAA]
Length = 362
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + + LGL D VQ+N SF+ G RG+H +
Sbjct: 15 NIPGLLVFDLPVHGDNRGWFKENWQRAKMMGLGLPDFGPVQNNISFNATKGVTRGIHAE- 73
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG IF VD+R + + + IY+P G + F L+
Sbjct: 74 ---PWDKYISIAAGEIFGAWVDLRPGESFGQVFTTRL---DPSKAIYVPRGVGNSFQALQ 127
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D + I WP+ SE D + P L
Sbjct: 128 DGTVYTYLVNAHWSLEQKKTYTFVNLADPELGIEWPIP-LEESERSEADLHHPMLRDAK 185
>gi|226365215|ref|YP_002782998.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus opacus
B4]
gi|226243705|dbj|BAH54053.1| putative dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus
opacus B4]
Length = 189
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL----------GLQDVFVQDNHSFSFDCG 51
++ V + F D RG F++T+ +++ + FVQD+ S S G
Sbjct: 8 ELDDVLLFTPEPFRDGRGLFTRTFDAQIFDDAVASRASTGRVVRAADFVQDSQSRS-VRG 66
Query: 52 TIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTG 111
IRG+H + +AKLVRC G I+D+ VD+RR SPT+G + + +++P G
Sbjct: 67 VIRGMHCR-SGDGEAKLVRCARGAIYDVLVDVRRTSPTFGRKQAFRLDDETFSHLFVPAG 125
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
F HGF L +V Y++ + D VA+ D+S+ I WPL + S +D +
Sbjct: 126 FLHGFQALTD-CDVCYRIDRGHDPTEDLAVAYDDRSLGIEWPLPVSAT---SPRDASAGS 181
Query: 172 LNQI 175
+
Sbjct: 182 WEDL 185
>gi|269127004|ref|YP_003300374.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermomonospora curvata DSM
43183]
gi|268311962|gb|ACY98336.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermomonospora curvata DSM
43183]
Length = 208
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQ 59
+ + F D+RG + + +G F S +RG+HF
Sbjct: 6 LAVAGAFEFVPPIFRDARGQVVTPFHGEGFSRVGGHRAFPVAQTIHSVSRRGVVRGVHFT 65
Query: 60 RPPYAQA-KLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P + K V C GR+ DI VD+R SPT+G + ++ + ++ +Y+P G H F+
Sbjct: 66 VTPPGRTAKYVFCPHGRVLDIVVDLRLGSPTFGRYDAVPLGPDDCRAVYLPVGVGHAFVA 125
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
L + + Y +++ ++ E++ ++ D + + P+ I P +SE+D+ P L Q+
Sbjct: 126 LRDGSVMSYLLSECFTPENERELSVFDPRLRL--PIPSDIEPILSERDRKAPTLEQV 180
>gi|184201350|ref|YP_001855557.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Kocuria rhizophila
DC2201]
gi|183581580|dbj|BAG30051.1| putative dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Kocuria
rhizophila DC2201]
Length = 326
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQD-VFVQDNHSFSFDCGTIRGLHFQRP 61
I+ + ++ D+RGWF+ + GL D FVQ+N SF+ T RG+H +
Sbjct: 6 IDGLLLVDVPVHGDNRGWFTDNWQRAKAVAAGLPDASFVQNNISFNGSRRTTRGIHAE-- 63
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GRIF VD+R G +++P G + F TLE
Sbjct: 64 --PWDKYVSVATGRIFGACVDLREGPGFGTVVTHEI---TPGTAVFVPRGVGNAFQTLEE 118
Query: 122 NTEVIYKVTDFY--SVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
T Y VTD + + V D + I WP+ +++KD+ P L+ ++
Sbjct: 119 ATAYTYLVTDHWRADATAEYSFVNLGDPQLGIEWPVP-LAQAELADKDRAHPALDDVE-- 175
Query: 179 FEYDGLPLLSLNM 191
PL +
Sbjct: 176 ------PLAPAPL 182
>gi|167751722|ref|ZP_02423849.1| hypothetical protein EUBSIR_02731 [Eubacterium siraeum DSM 15702]
gi|167655530|gb|EDR99659.1| hypothetical protein EUBSIR_02731 [Eubacterium siraeum DSM 15702]
gi|291531200|emb|CBK96785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium siraeum 70/3]
gi|291557990|emb|CBL35107.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Eubacterium siraeum V10Sc8a]
Length = 191
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 6/181 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I + + +D RG F++ YS ++ + G++ + ++ S+ G IR LHFQR
Sbjct: 11 EIKGLIEVTPFNADDIRGCFTKDYSKEVFEANGIKHDLAEVFYTTSYK-GVIRALHFQRE 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLVRCI G ++D+ VD+R++SPT+ W++ E+ +I +P G AHG++ LE
Sbjct: 70 KQQP-KLVRCIHGHVYDVVVDLRKDSPTFKKWLAFELIGEKHNEILVPAGCAHGYLVLED 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL---DTILPSVSEKDQNLPFLNQIDSP 178
+ V YK + + E+D G+ W D I + W L +++KD+NL + S
Sbjct: 129 -SIVSYKCGEKFYGEYDDGIMWNDPDIAVDWKLDRVGGIDKVILADKDKNLQTFKEFMSK 187
Query: 179 F 179
+
Sbjct: 188 Y 188
>gi|119026526|ref|YP_910371.1| fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
in rhamnose biosynthesis [Bifidobacterium adolescentis
ATCC 15703]
gi|118766110|dbj|BAF40289.1| possible fused dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved
in rhamnose biosynthesis [Bifidobacterium adolescentis
ATCC 15703]
Length = 476
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQR 60
NI + + D+RGWF + + +LGL D VQ+N S++ G RG+H +
Sbjct: 16 NIPGLVVFDLPVHGDNRGWFKENWQRAKQTKLGLPDFGPVQNNISYNAKKGVTRGIHAE- 74
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + AG +F VD+R + ++ + IY+P G + F LE
Sbjct: 75 ---PWDKYISIAAGSVFGAWVDLRPGESFGQVYTTVL---DPSKAIYVPRGVGNSFQALE 128
Query: 121 MNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T Y V +S+E V D + I WP+ SE D + P L
Sbjct: 129 DGTVYTYLVNAHWSLEQKKTYTFVNLADPDLHIDWPIPLEDS-ERSEADLHHPMLKDAK 186
>gi|170747686|ref|YP_001753946.1| dTDP-4-dehydrorhamnose 35-epimerase related [Methylobacterium
radiotolerans JCM 2831]
gi|170654208|gb|ACB23263.1| dTDP-4-dehydrorhamnose 35-epimerase related [Methylobacterium
radiotolerans JCM 2831]
Length = 179
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ V L+ D+RG F + + L GL+ F + S S G IRG+HFQ P
Sbjct: 8 DLPGVLALRAPGSRDARGSFHKLMHAPSLAAAGLRTDFAEVYCSTSAR-GVIRGMHFQVP 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P+ AKLV C+ G + D+ +D+RR+SP YG V+ ++ +YIP G AHGF
Sbjct: 67 PHQHAKLVWCLCGAVTDVVLDLRRDSPGYGRAVAFDLGEEAPAGVYIPEGCAHGFAVRSG 126
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
++Y VT ++ D+G+ W S W + P++S++D+ P L+ +PF
Sbjct: 127 AATLLYLVTSVHAPAADAGIRWD--SFGFDWGIPH---PTLSDRDRLHPGLDAFATPF 179
>gi|158312617|ref|YP_001505125.1| dTDP-4-dehydrorhamnose 35-epimerase related [Frankia sp. EAN1pec]
gi|158108022|gb|ABW10219.1| dTDP-4-dehydrorhamnose 35-epimerase related [Frankia sp. EAN1pec]
Length = 204
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF--VQDNHSFSFDCGTIRGLHFQ 59
I + + ED RGWF + + L + G+ F VQ++ S++ G RG H +
Sbjct: 15 EIPGLFVFDVTSIEDERGWFQEKFHHAKLVDAGIPASFRVVQNSLSYNKKLGVTRGFHAE 74
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
K + + GR+F VD+R + + + +++P G A+ + T+
Sbjct: 75 ----PWDKYISVVKGRVFCAYVDLRAGK---SFGTVVTVELDRNRAVFLPQGVANSYQTI 127
Query: 120 EMNTEVIYKVTDFYSVEHDSG---VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +T +Y V + +S + V D + + WP+ +S++DQ+ P L +
Sbjct: 128 EDDTYYLYSVNEHWSADRYDSYVFVNLADPVLGVQWPVP-LREAVISDRDQHHPSLADV 185
>gi|291009629|ref|ZP_06567602.1| dTDP-4-deoxyglucose 3,5-epimerase [Saccharopolyspora erythraea NRRL
2338]
gi|2599288|gb|AAB84077.1| EryBVII [Saccharopolyspora erythraea NRRL 2338]
gi|2665341|emb|CAA72086.1| putative TDP-4-keto-6-deoxyglucose 3,5 epimerase or 5-epimerase
[Saccharopolyspora erythraea NRRL 2338]
Length = 193
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 7 RILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
+D RG F + +G + Q NH S G +RGLHF P Q
Sbjct: 5 FEFTPDPKQDRRGLFVSPLQDEAFVGAVGHRFPVAQMNHIVSAR-GVLRGLHFTTTPPGQ 63
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
K V C GR D+ VDIR SPT+G W ++E+ + +Y P G AH F+ LE +T +
Sbjct: 64 CKYVYCARGRALDVIVDIRVGSPTFGKWDAVEMDTEHFRAVYFPRGTAHAFLALEDDTLM 123
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
Y V+ Y E++ + D ++ + WP + +S++D L
Sbjct: 124 SYLVSTPYVAEYEQAIDPFDPALGLPWP--ADLEVVLSDRDTVAVDLE 169
>gi|225025750|ref|ZP_03714942.1| hypothetical protein EIKCOROL_02654 [Eikenella corrodens ATCC
23834]
gi|224941531|gb|EEG22740.1| hypothetical protein EIKCOROL_02654 [Eikenella corrodens ATCC
23834]
Length = 136
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 41 QDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISA 100
Q NHS S +RGLH+Q Q KLVR IAG +FD+A+D+RR+SPT+G W +SA
Sbjct: 2 QGNHSKSGQ-AVLRGLHYQTENT-QGKLVRVIAGEVFDVAIDLRRSSPTFGQWAGAILSA 59
Query: 101 NNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP 160
N Q+++P GFAHGF L E +YK TD+Y+ + + + W D ++ I WPL P
Sbjct: 60 ENKHQLWVPEGFAHGFYVLSEEAEFVYKCTDYYNPKAEHSLLWNDPAVGIEWPLQGE--P 117
Query: 161 SVSEKDQNLPFLNQI 175
+S KD LNQ
Sbjct: 118 KLSPKDLAGKLLNQA 132
>gi|255013255|ref|ZP_05285381.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_1_7]
Length = 188
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ + D RG F + Y+ K+ G+ + ++ S G IR +HFQ
Sbjct: 10 LDMKGAYEITPFYATDERGGFIKDYNIDAFKQNGIDHELKEVFYTIS-KKGVIRAMHFQL 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLVRCI+G ++D+ +D+R +SPT+G W +++ N +YIP F HG++ LE
Sbjct: 69 VKQQA-KLVRCISGHVYDVIIDLRPDSPTFGKWQGFDLTGENQKALYIPQYFGHGYLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP---LLDTILPSVSEKDQNLPFLNQ 174
+ V YK + + E D+G+ + D + I WP + +S+KD+NL L +
Sbjct: 128 D-SVVSYKCGEVFYGEGDAGIMYNDPDMAIEWPFGKIGGIEKLIISDKDKNLMSLKE 183
>gi|256840779|ref|ZP_05546287.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parabacteroides sp. D13]
gi|298376604|ref|ZP_06986559.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_19]
gi|256738051|gb|EEU51377.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Parabacteroides sp. D13]
gi|298266482|gb|EFI08140.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 3_1_19]
Length = 189
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ + D RG F + Y+ K+ G+ + ++ S G IR +HFQ
Sbjct: 10 LDMKGAYEITPFYATDERGGFIKDYNIDAFKQNGIDHELKEVFYTISKK-GVIRAMHFQL 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLVRCI+G ++D+ +D+R +SPT+G W +++ N +YIP F HG++ LE
Sbjct: 69 VKQQA-KLVRCISGHVYDVIIDLRPDSPTFGKWQGFDLTGENQKALYIPQYFGHGYLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQ 174
+ V YK + + E D+G+ + D + I WP +S+KD+NL L +
Sbjct: 128 D-SVVSYKCGEVFYGEGDAGIMYNDPDMAIEWPFDKIGGIEKLIISDKDKNLMSLKE 183
>gi|300857650|ref|YP_003782633.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium
pseudotuberculosis FRC41]
gi|300685104|gb|ADK28026.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium
pseudotuberculosis FRC41]
gi|302329942|gb|ADL20136.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium
pseudotuberculosis 1002]
Length = 460
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ EDSRGWF + + L LGL VQ+N SF+ + G RGLH +
Sbjct: 8 IQGMMVIHLDLHEDSRGWFKENWQESKLVGLGLTGFRPVQNNISFNAEAGVTRGLHAE-- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V G +F D+R S T+G ++ I+ +++P G A+GF LE
Sbjct: 66 --PWDKYVSVATGSVFGAWCDLREGSATFGATFTITITPET--AVFVPRGVANGFQALEA 121
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D ++ + V D +++I+WP+ ++S+KD P L
Sbjct: 122 TA-YTYLVNDHWAPDAHYSFVNLADPALNISWPIP-LDQATLSKKDTAHPPLASA 174
>gi|242310053|ref|ZP_04809208.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter pullorum MIT
98-5489]
gi|239523350|gb|EEQ63216.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter pullorum MIT
98-5489]
Length = 185
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF+D RG ++S+ + +L ++ + IRG+H
Sbjct: 13 LEGVYIITPNKFQDLRGEIWTAFTSEAIDKLLPNNLQFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ KL C+ G I + VD R++SPTY + I+ N I +P+GF + +
Sbjct: 70 HKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIINQENQQIILVPSGFGNAHYVSSDS 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
YK + AW D I I WP + P +S++D
Sbjct: 130 AVYYYKCAYKGSYVDANEQFTFAWNDPRIGIDWPTNN---PILSDRDMEA 176
>gi|83272138|gb|ABC00735.1| CosL [Streptomyces olindensis]
Length = 208
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV--QDNHSFSFDCGTIRGLHF 58
+ + R+F D RG F + + ++ + F Q NHS S GT+RG+HF
Sbjct: 6 LKVEGAYEFTPRQFRDHRGLFVSPFQLEAFQQALGRPHFPVAQTNHSISRR-GTVRGIHF 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR DI VD+R SPT+ W ++E+ + Y P G H F+
Sbjct: 65 TVTPPGTAKYVYCARGRALDIVVDLRVGSPTFMQWDAVEMDQVHFRASYFPVGVGHAFVA 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
LE +T + Y +T Y E++ V D+ + + P + SE+D
Sbjct: 125 LEDDTVMSYLLTGPYVAENELAVDIFDRELGVRLP--AGLDTVQSERD 170
>gi|256004336|ref|ZP_05429318.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum DSM
2360]
gi|255991770|gb|EEU01870.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium thermocellum DSM
2360]
Length = 139
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/139 (45%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 38 VFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLE 97
FVQDNH S G +RG+HFQ + Q +LVR I G+++D+AVD+R+NSPT+G W +E
Sbjct: 2 EFVQDNHIKSRI-GVLRGIHFQ-RKFPQGRLVRVIKGKVYDVAVDLRKNSPTFGKWYGIE 59
Query: 98 ISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT 157
+SA N YIP F H F+TLE +TEV+ K T+ Y E +SG+ + D ++I WP ++
Sbjct: 60 LSAENKKMFYIPENFGHAFLTLEDDTEVLCKTTNVYRPEFESGIIYNDPELNIDWPQIEG 119
Query: 158 ILPSVSEKDQNLPFLNQID 176
+ +SEKD+NLP +
Sbjct: 120 DI-VLSEKDKNLPTFKNAE 137
>gi|302205388|gb|ADL09730.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium
pseudotuberculosis C231]
gi|308275626|gb|ADO25525.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium
pseudotuberculosis I19]
Length = 460
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++ EDSRGWF + + L LG VQ+N SF+ + G RGLH +
Sbjct: 8 IQGMMVIHLDLHEDSRGWFKENWQESKLVGLGFTGFRPVQNNISFNAEAGVTRGLHAE-- 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V G +F D+R S T+G ++ I+ +++P G A+GF LE
Sbjct: 66 --PWDKYVSVATGSVFGAWCDLREGSATFGATFTITITPET--AVFVPRGVANGFQALEA 121
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D ++ + V D +++I+WP+ ++S+KD P L
Sbjct: 122 TA-YTYLVNDHWAPDAHYSFVNLADPALNISWPIP-LDQATLSKKDTAHPPLASA 174
>gi|237718657|ref|ZP_04549138.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_2_4]
gi|229452117|gb|EEO57908.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 2_2_4]
Length = 189
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + D RG F + Y+ + K G++ + ++ S G IR +HFQ
Sbjct: 10 LEMKGAFEITPFYATDERGGFVKDYNIDMFKANGIEHELKEVFYTIS-KKGVIRAMHFQL 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLVRCI+G ++D+ +D+R +SPT+G W +++ +N +YIP F HG++ LE
Sbjct: 69 VKQQA-KLVRCISGHVYDVIIDLRPDSPTFGKWQGFDLTGDNQKTLYIPQFFGHGYLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQ 174
+ V YK + + E D+G+++ D + I WP +SEKD+NL L +
Sbjct: 128 D-SVVSYKCGEVFYGEGDAGISYNDPDMGIVWPFDKIGGIENMIISEKDKNLMSLKE 183
>gi|169836967|ref|ZP_02870155.1| dTDP-4-dehydrorhamnose reductase [candidate division TM7
single-cell isolate TM7a]
Length = 169
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQRP 61
I + ++K D+RGWF + Y + ++ LGL VQ+N SF+ G RGLH +
Sbjct: 18 IPGLFVVKLPVHGDNRGWFKENYQKEKMEALGLPSFDIVQNNISFNDKAGATRGLHAE-- 75
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + GR+F D+R+ + N G I++P G A+G+ L+
Sbjct: 76 --PWNKFISTANGRVFGAWCDLRKGDSFGRVFTHEI---NPGTAIFVPKGVANGYQALDD 130
Query: 122 NTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDT 157
N Y V +S + V D ++ I WP+
Sbjct: 131 NIAYTYLVDAHWSPDAKYTFVNLFDPALGINWPISQE 167
>gi|224418633|ref|ZP_03656639.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter canadensis MIT
98-5491]
gi|253826822|ref|ZP_04869707.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter canadensis MIT
98-5491]
gi|313142158|ref|ZP_07804351.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter canadensis MIT
98-5491]
gi|253510228|gb|EES88887.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter canadensis MIT
98-5491]
gi|313131189|gb|EFR48806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter canadensis MIT
98-5491]
Length = 187
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + + ILK F+D+RG F + +S + ++ L F + +S S G +RG+HFQ P
Sbjct: 7 DFDGLYILKRSMFKDNRGEFIKHFSEECFRQNSLDTDFKESYYSVSKK-GVLRGMHFQLP 65
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
PY KLV +G+I D+ VDIR +S T+G + + +S+ +YIP GFAHGF+ LE
Sbjct: 66 PYEHTKLVYVSSGKILDVVVDIRLHSSTFGLFFKIVLSSKKSSFLYIPKGFAHGFLCLED 125
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
NT V Y T YS HDSG+ + S W + +S++D + L
Sbjct: 126 NTRVHYLQTSVYSKNHDSGILYD--SFGFNWLEESSKYEVKNLIISQRDLSFESLKDFKL 183
Query: 178 PFEY 181
+
Sbjct: 184 KKVF 187
>gi|291541987|emb|CBL15097.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruminococcus bromii L2-63]
Length = 190
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 6/181 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ ++K D RG F + YS ++ + GL+ + ++ S G IR LHFQ
Sbjct: 11 DFEGAYLIKPFCATDIRGAFIKDYSKEVFEANGLEHNLAEVFYTVSHK-GVIRALHFQ-R 68
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ QAKLVRCI G++FD+ VD+R SPT+ W +S N ++Y+P FAHG++ LE
Sbjct: 69 VHEQAKLVRCIKGKVFDVIVDLRPESPTFKKWQGFYLSEENMNELYVPEHFAHGYLVLEP 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQIDSP 178
+ V YK + + E+D G+ + D + + WP + +++KD+NL + +
Sbjct: 129 -SVVSYKCGEKFYGEYDDGIMYNDPDLGVEWPFDEIGGIENLIIADKDKNLQTFKEYEDK 187
Query: 179 F 179
+
Sbjct: 188 Y 188
>gi|87303221|ref|ZP_01086014.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 5701]
gi|87282116|gb|EAQ74077.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Synechococcus sp. WH 5701]
Length = 133
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 52 TIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTG 111
+RGLH+Q Q KLVRC G +FD+AVD+R+ SP++G WV + Q+++P G
Sbjct: 1 MLRGLHYQ-LVQPQGKLVRCSQGSVFDVAVDVRQGSPSFGRWVGTILDDVTHHQLWVPPG 59
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLP 170
FAHGF+ L + Y +D+Y + G+AW D ++ ITWP L + P +S KD P
Sbjct: 60 FAHGFLVLSDLADFCYLCSDYYHPLSEQGIAWNDPAVGITWPQLPAGVEPQLSAKDLANP 119
Query: 171 FLNQ 174
L Q
Sbjct: 120 ALAQ 123
>gi|260437449|ref|ZP_05791265.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Butyrivibrio
crossotus DSM 2876]
gi|292810081|gb|EFF69286.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Butyrivibrio
crossotus DSM 2876]
Length = 191
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + D RG + Y+ + G++ + ++ + G IR LHFQ
Sbjct: 10 LPLKGSYKITPFLATDERGGLLKDYNVDIFNSNGIKHNLKETFYTITRK-GVIRALHFQ- 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
QAKL+RCI+G ++ + D+R+ SPTY W+ ++ +N +Y+P F G+ +E
Sbjct: 68 LIKPQAKLIRCISGHVYAVICDLRKESPTYKKWLPFHLTGDNMTMLYVPGEFGLGYFVIE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL------DTILPSVSEKDQNLPFLNQ 174
V YK + + E DSG+ W DK + I WP+ +S+KD NL +
Sbjct: 128 D-AVVSYKCDEVFYGEGDSGIMWNDKDLAIEWPIELIEGVTSEDDLIISDKDSNLMSFKE 186
Query: 175 IDSPF 179
D +
Sbjct: 187 YDERY 191
>gi|118588742|ref|ZP_01546150.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stappia aggregata IAM 12614]
gi|118438728|gb|EAV45361.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Stappia aggregata IAM 12614]
Length = 188
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V + D RG F++ Y L +Q N S T+RG+H
Sbjct: 17 SIEGVIVHDLVAHIDERGSFTEIYRETWLT----DFKSIQWNIVTS-REDTLRGVHVH-- 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ +AGR+ DIRR+SPT+G L+++ + + IP G HGF E
Sbjct: 70 -KDHYDYLMILAGRMLLGLHDIRRDSPTFGTSEILDLTDEHRRAVSIPPGVCHGFYYPEA 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+T +Y V+ ++ D G + +++ WP D P +S++D+ Q+ F
Sbjct: 129 STH-LYSVSTYFDPRDDLGCKFDCPELNLAWPTKD---PVLSDRDRTADSYAQMLDKF 182
>gi|241888608|ref|ZP_04775915.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Gemella haemolysans
ATCC 10379]
gi|241864631|gb|EER69006.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Gemella haemolysans
ATCC 10379]
Length = 187
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV----QDNHSFSFDCGTIRGLH 57
I+ + +L + D RG+F + + L + G+ + F Q+N S S + GT+RG+H
Sbjct: 9 EIDGLLVLTSPLHHDDRGYFLENWKKNDLIKFGVPEDFFDNDLQNNVSVS-NKGTLRGMH 67
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
Q AKL+ G VD+RR S TY L++ G+ +++P G A+G
Sbjct: 68 CQ----GWAKLMTVAWGTFRMCFVDLRRESTTYKKVTCLDVKP--GMVVFVPEGVANGAQ 121
Query: 118 TLEMNTEVIYKVTDFYSV-EHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+L N + Y VT +Y+ E G+ D +++ W T P +SEKD N +++
Sbjct: 122 SLVENGILNYIVTGYYNPNEKYLGITPIDLKLNLPW--DMTTTPIISEKDMNSLSYDEV 178
>gi|255029774|ref|ZP_05301725.1| hypothetical protein LmonL_13189 [Listeria monocytogenes LO28]
Length = 107
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K E G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHEAGIDMKFIQDNHSLSVEAGVLRGMHYQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISA 100
P AQ KL+R G I+D+ VD+R+ SPTYG W +S
Sbjct: 67 PKAQTKLIRVATGAIYDVVVDMRKGSPTYGEWEGYILSE 105
>gi|225020236|ref|ZP_03709428.1| hypothetical protein CORMATOL_00239 [Corynebacterium matruchotii
ATCC 33806]
gi|224946980|gb|EEG28189.1| hypothetical protein CORMATOL_00239 [Corynebacterium matruchotii
ATCC 33806]
Length = 505
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 15/180 (8%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKE------LGLQDVFVQDNHSFSFDCGTIRGL 56
I + +L D+RGWF + + + + + VQ+N SF+ G RGL
Sbjct: 14 IAGLYVLHLDVRPDNRGWFKENWQREKIAAIPELSRACREFRPVQNNISFNAQPGVTRGL 73
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + K V G +F + D+R +SPT+G S I+ +++P G A+GF
Sbjct: 74 HAE----PWNKFVTIAQGEVFGVWCDLRADSPTFGKVFSTRIT--TEQAVFVPRGVANGF 127
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
LE + Y V +S + V D ++ I WP+ +S D+ P L
Sbjct: 128 QALEP-SIYTYLVDAHWSPQAHYSHVNLADPALGICWPIP-LDKAEISAADRTHPLLADA 185
>gi|305431506|ref|ZP_07400683.1| possible dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter coli
JV20]
gi|304445428|gb|EFM38064.1| possible dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter coli
JV20]
Length = 180
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++ + L ++ + + + + + +RG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTEEDLGDIVPKGLKFKHDKFINSHFNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV C+ G + + VD R++SPTY W I+ +N I +P + +
Sbjct: 70 IKTWKLVTCVYGEVHQVVVDCRKDSPTYLKWEKFIINQDNQQLILLPPNMGNSHYVSSKD 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
YK+ ++ AW D+ I I WP P +SE+D
Sbjct: 130 AVYYYKLAYEGEYLDAPDQFTYAWNDERIGIDWPTK---SPILSERD 173
>gi|121612136|ref|YP_001001086.1| putative nucleotide-sugar epimerase-dehydratase [Campylobacter
jejuni subsp. jejuni 81-176]
gi|167005983|ref|ZP_02271741.1| putative nucleotide-sugar epimerase-dehydratase [Campylobacter
jejuni subsp. jejuni 81-176]
gi|205356129|ref|ZP_03222896.1| putative nucleotide sugar epimerase dehydratase [Campylobacter
jejuni subsp. jejuni CG8421]
gi|37719584|gb|AAR01889.1| putative dTDP-4-dehydro rhamnose 3,5-epimerase [Campylobacter
jejuni]
gi|37719608|gb|AAR01912.1| putative dTDP-4-dehydro rhamnose 3,5-epimerase [Campylobacter
jejuni]
gi|56797607|emb|CAI38881.1| putative nucleotide-sugar epimerase-dehydratase [Campylobacter
jejuni subsp. jejuni 81-176]
gi|62865925|gb|AAY17134.1| unknown [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249673|gb|EAQ72632.1| putative nucleotide-sugar epimerase-dehydratase [Campylobacter
jejuni subsp. jejuni 81-176]
gi|205345972|gb|EDZ32608.1| putative nucleotide sugar epimerase dehydratase [Campylobacter
jejuni subsp. jejuni CG8421]
Length = 181
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++SK + +L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G I + VD R++SPTY + I+ +N I +P GF + +
Sbjct: 70 VKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIINQDNQQIILVPAGFGNAHYVTSES 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
YK D+ AW D+ I I WP T P +SE+D
Sbjct: 130 AVYYYKCAYKGDYVDAPDQFTYAWNDERIGIDWP---TNSPILSERD 173
>gi|159149194|gb|ABW91159.1| NDP-hexose 3,5-epimerase [Streptomyces eurythermus]
Length = 202
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ D RG F + + L+ G Q N + S +RG+H P
Sbjct: 9 PDAYRIQPELLPDHRGRFYEGLRYETLRAATGHAFELRQVNFTVS-HRNVLRGVHGTTMP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q K+V C+ G + VD+R SP +G L + + +Y+P G ++ L +
Sbjct: 68 PGQGKIVTCVRGAARAMVVDLRVGSPAFGHHDVLRLDPRDATALYVPDGLGLAYVALTDD 127
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T V Y Y V D ++ + W L + P S +D P L +
Sbjct: 128 TCVNYLCDREYVHGTIIDVDALDPALALPWDLDEP--PVRSARDAAAPTLAEA 178
>gi|257880163|ref|ZP_05659816.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,230,933]
gi|257814391|gb|EEV43149.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium
1,230,933]
Length = 118
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
++R + G + D+ VDIR+ SPTYG W +S +N Q+ +P G+AHGF+TL N +Y
Sbjct: 1 MIRVVTGAVLDVVVDIRKGSPTYGQWDGFILSEHNHRQLLVPKGYAHGFVTLTPNVNFLY 60
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI--DSPFEY 181
K ++Y+ E D G+A+ D + I WP+ D +SEKD P L + ++PF Y
Sbjct: 61 KCDNYYNAEADGGIAFDDPDLAIDWPI-DPSRAIMSEKDHRHPTLKEFEAENPFVY 115
>gi|302335388|ref|YP_003800595.1| dTDP-4-dehydrorhamnose reductase [Olsenella uli DSM 7084]
gi|301319228|gb|ADK67715.1| dTDP-4-dehydrorhamnose reductase [Olsenella uli DSM 7084]
Length = 481
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
I +R+ D RGWF + + + GL VQ+N SF+ G RG+H +
Sbjct: 13 EIAGLRVFDLCVHGDDRGWFKENWQQAKMSSCGLPDFHPVQNNISFNAQRGVTRGIHAE- 71
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
K + +G IF + VD+R + + +++P G + F LE
Sbjct: 72 ---PWDKYISVASGSIFGVWVDLRAGEGFGRVFSCRI---DPSKAVFVPRGVGNAFQALE 125
Query: 121 MNTEVIYKVTDFYS---VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V +S E + V D+ + I WP+ + +S+ D++ P L +
Sbjct: 126 DGTVYTYLVNAHWSQELKESYTFVNLADEQLAIEWPIPLSEC-ELSQADRDHPALRDV 182
>gi|301309860|ref|ZP_07215799.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
gi|300831434|gb|EFK62065.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacteroides sp. 20_3]
Length = 189
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ + D RG F + Y+ K+ G+ + ++ S G IR +HFQ
Sbjct: 10 LDMKGAYEITPFYATDERGGFIKDYNIDAFKQNGIDHELKEVFYTISKK-GVIRAMHFQL 68
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLVRCI+G ++D+ +D+R +SPT+G W +++ N +YIP F HG++ LE
Sbjct: 69 VKQQA-KLVRCISGHVYDVIIDLRPDSPTFGKWQGFDLTGENQKALYIPQYFGHGYLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLNQ 174
+ V YK + + E D+G+ + D + I WP +S+KD+NL + +
Sbjct: 128 D-SVVSYKCGEVFYGEGDAGIMYNDPDMAIEWPFDKIGGIEKLIISDKDKNLMSMKE 183
>gi|288919318|ref|ZP_06413653.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
gi|288349312|gb|EFC83554.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
Length = 191
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 14/184 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF--VQDNHSFSFDCGTIRGLHFQ 59
I + I D RGWF + + L GL + F VQ + S++ G RG H +
Sbjct: 14 EIPGLLIFDITSIGDERGWFQEKFHRAKLVAAGLPESFEVVQTSVSYNRQAGVTRGFHAE 73
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
K + +AG++F +D+RR +NG +++P G A+ F TL
Sbjct: 74 ----PWDKYISVVAGQVFCAFLDLRRGENFGRVVTVEI---DNGRAVFLPRGVANSFQTL 126
Query: 120 EMNTEVIYKVTDFYSVE--HDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+T +Y V +S + + V D + + WP+ +SE+D+ L
Sbjct: 127 VDDTYYLYSVNRHWSADQYDEYVFVNLADPEVGVHWPIP-LDKAVISERDRGHVPLADAR 185
Query: 177 SPFE 180
PFE
Sbjct: 186 -PFE 188
>gi|326486404|gb|ADZ76234.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni
subsp. jejuni]
gi|326486472|gb|ADZ76299.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni
subsp. jejuni]
Length = 181
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++SK + +L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G + + VD R++SPTY I+ +N I +P GF + +
Sbjct: 70 VKTYKLATCVYGEVHQVVVDCRKDSPTYLKHERFIINQDNQQIILVPAGFGNAHYVSSES 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
YK ++ AW D+ I I WP T P +SE+D
Sbjct: 130 AVYYYKCAYLGEYMDAHDQFTYAWNDERIGIDWP---TNSPILSERD 173
>gi|148925615|ref|ZP_01809303.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni CG8486]
gi|145845625|gb|EDK22716.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni CG8486]
Length = 181
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 9/172 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++S+ + +L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTSEAIDKLLPNGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G + + VD R++SPTY I+ +N I +P GF + +
Sbjct: 70 VKTYKLATCVYGEVHQVVVDCRKDSPTYLKHERFIINQDNQQIILVPAGFGNAHYVSSES 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
YK ++ AW D+ I I WP T P +SE+D
Sbjct: 130 AVYYYKCAYLGEYMDAHDQFTYAWNDERIGIDWP---TNSPILSERDILAMS 178
>gi|283955038|ref|ZP_06372545.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni
subsp. jejuni 414]
gi|283793536|gb|EFC32298.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni
subsp. jejuni 414]
Length = 181
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++ + L +L + + + + +RG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTDEHLSKLVPDGIKFKHDKFINSHFNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV C+ G + + VD R++S TY W IS N I +P +
Sbjct: 70 VKTYKLVTCVYGEVHQVVVDCRKDSSTYLKWEKFIISHKNQQLILLPPNMGNSHYVSSKE 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
YK+ ++ AW D+ I I WP T P +SE+D
Sbjct: 130 AVYYYKLAYEGEYMDAPDQFTYAWNDERIGIDWP---TNTPILSERD 173
>gi|326789497|ref|YP_004307318.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Clostridium
lentocellum DSM 5427]
gi|326540261|gb|ADZ82120.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Clostridium
lentocellum DSM 5427]
Length = 182
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 65/177 (36%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+IL+ ED+RG YS K L E G+ F++++ GT+ G+HFQ
Sbjct: 8 ELKEVKILEYACKEDNRGLKFSNYSEKELLENGIDVHFIEEDVYCPIKSGTLYGIHFQNN 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P AQ KL+ CI GR D A+D+R++SP Y W+S+E+S N QI IP GF H F++LE
Sbjct: 68 PVAQTKLLYCIEGRGIDYAIDLRKDSPQYLKWISVELSKENRRQILIPKGFGHAFISLED 127
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSP 178
NT+V+ ++ +++ ++ +AW D I I +P+ + P +++ D + P L D
Sbjct: 128 NTKVVMRIDEYFDNKYSRQIAWNDSQIAIQYPVKN---PILAQHDIDAPKLRDSDCN 181
>gi|149006111|ref|ZP_01829840.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP18-BS74]
gi|307126573|ref|YP_003878604.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
670-6B]
gi|18376692|gb|AAL68416.1|AF246897_13 dTDP 4-keto 6-deoxyglucose 3,5-epimerase [Streptococcus pneumoniae]
gi|147762467|gb|EDK69428.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP18-BS74]
gi|306483635|gb|ADM90504.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
670-6B]
gi|332076800|gb|EGI87262.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Streptococcus
pneumoniae GA17545]
Length = 198
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + ++ LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMEPLGFPESFFAAGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|86152037|ref|ZP_01070250.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Campylobacter jejuni
subsp. jejuni 260.94]
gi|315124864|ref|YP_004066868.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|56783464|emb|CAI38717.1| putative nucleotidyl-sugar epimerase [Campylobacter jejuni]
gi|85841145|gb|EAQ58394.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Campylobacter jejuni
subsp. jejuni 260.94]
gi|315018586|gb|ADT66679.1| dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
Length = 181
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 9/172 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++ + + +L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTDEAINKLLPSGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G I + VD R++SPTY I+ +N I +P GF + +
Sbjct: 70 VKTYKLATCVYGEIHQVVVDCRKDSPTYLKHERFIINQDNQQIILVPAGFGNAHYVSSES 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
YK D+ AW D+ I I WP T P +SE+D
Sbjct: 130 AVYYYKCAYKGDYADAPDQFTYAWNDERIGIDWP---TNSPILSERDILAMS 178
>gi|326486339|gb|ADZ76172.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni]
gi|326486363|gb|ADZ76195.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni]
Length = 181
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 9/172 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++S+ + +L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTSEAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G + + VD R++SPTY I+ +N I +P GF +
Sbjct: 70 VKTYKLATCVYGEVHQVVVDCRKDSPTYLKHERFIINQDNQKIILVPAGFGNAHYVSSET 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
YK ++ AW D+ I I WP + P +SE+D
Sbjct: 130 AVYYYKCAYLGEYMDAPDQFTYAWNDERIGIDWPTNN---PILSERDILAMS 178
>gi|255018157|ref|ZP_05290283.1| hypothetical protein LmonF_11371 [Listeria monocytogenes FSL
F2-515]
Length = 101
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 61/92 (66%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K E G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHEAGIDMKFIQDNHSLSVEAGVLRGMHYQTN 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCW 93
P AQ KL+R G I+D+ VD+R+ SPTYG W
Sbjct: 67 PKAQTKLIRVATGAIYDVVVDMRKGSPTYGEW 98
>gi|86150038|ref|ZP_01068266.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88596400|ref|ZP_01099637.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni 84-25]
gi|218563034|ref|YP_002344813.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|85839484|gb|EAQ56745.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88191241|gb|EAQ95213.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni 84-25]
gi|112360740|emb|CAL35539.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|315928031|gb|EFV07350.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|315928953|gb|EFV08204.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Campylobacter
jejuni subsp. jejuni 305]
Length = 181
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++ + L +L + + + + +RG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTDEYLSKLVPDGIKFKHDKFINSHFNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV C+ G + + VD R++SPTY W IS N I +P +
Sbjct: 70 VKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEKFIISYKNQQLILLPPNMGNSHYVSSKE 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
YK+ ++ AW D+ I I WP T P +S++D
Sbjct: 130 AVYYYKLAYEGEYMDAPDQFTYAWNDERIGIDWP---TNTPILSDRD 173
>gi|326486386|gb|ADZ76217.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni]
Length = 181
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 9/172 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++S+ + +L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTSEAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G + + VD R++SPTY I+ +N I +P GF +
Sbjct: 70 VKTYKLATCVYGEVHQVVVDCRKDSPTYLKHERFIINQDNQKIILVPAGFGNAHYVSSET 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
YK ++ AW D+ I I WP T P +SE+D
Sbjct: 130 AVYYYKCAYLGEYMDAPDQFTYAWNDERIGIDWP---TNSPILSERDILAMS 178
>gi|306835067|ref|ZP_07468110.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
accolens ATCC 49726]
gi|304569048|gb|EFM44570.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
accolens ATCC 49726]
Length = 461
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQ--DNHSFSFDCGTIRGLHFQR 60
I +RI++ D+RGWF + + + L E+ + Q N+ G RGLH +
Sbjct: 8 IEGLRIIELDVHGDNRGWFKENWQREKLGEVAPELASFQPVQNNISYNRTGATRGLHAE- 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLV G+IF D+R S T+G V+ E+ +++P G A+GF LE
Sbjct: 67 ---PWDKLVSVANGKIFGAWCDLREGSATFGEIVTHEVGPET--AVFVPRGVANGFQALE 121
Query: 121 MNTEVIYKVTDFYSVEH-DSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V + +S E +G+ + WPL VSEKD++LP L +
Sbjct: 122 E-TSYSYLVNEHWSPEARYTGINLD----AVEWPLEPRE---VSEKDKHLPALADV 169
>gi|227502493|ref|ZP_03932542.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
accolens ATCC 49725]
gi|227076766|gb|EEI14729.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
accolens ATCC 49725]
Length = 461
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQ--DNHSFSFDCGTIRGLHFQR 60
I +RI++ D+RGWF + + + L E+ + Q N+ G RGLH +
Sbjct: 8 IEGLRIIELDVHGDNRGWFKENWQREKLGEVAPELASFQPVQNNISYNRTGATRGLHAE- 66
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
KLV G+IF D+R S T+G V+ E+ +++P G A+GF LE
Sbjct: 67 ---PWDKLVSVANGKIFGAWCDLREGSATFGEIVTHEVGPET--AVFVPRGVANGFQALE 121
Query: 121 MNTEVIYKVTDFYSVEH-DSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T Y V + +S E +G+ + WPL VSEKD++LP L +
Sbjct: 122 E-TSYSYLVNEHWSPEARYTGINLD----AVEWPLEPRE---VSEKDKHLPALADV 169
>gi|315639162|ref|ZP_07894327.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter upsaliensis
JV21]
gi|315480757|gb|EFU71396.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter upsaliensis
JV21]
Length = 177
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 11/170 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+K KF+D RG ++ + L F D S IRG+H
Sbjct: 13 LKGVFIIKPNKFKDLRGEIWTAFTQEQL-AHLAAVPFKHDKFITS-KKDVIRGIHGD--- 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G I + VD R +SPTY + S I+ N L I +P GF + +
Sbjct: 68 TKTYKLATCLYGEILQVVVDCREDSPTYLKYESFVINPQNQLLILVPKGFGNAHLVRSNE 127
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
YK ++ E AW D+ I + W + P +SE+D
Sbjct: 128 AVYYYKCAYEGEYVDAEEQFTYAWNDERIGVKWGIEK---PILSERDMQA 174
>gi|255324210|ref|ZP_05365332.1| dtdp-4-dehydrorhamnose 3,5-epimerase, dtdp-dehydrorhamnose
reductase [Corynebacterium tuberculostearicum SK141]
gi|255298726|gb|EET78021.1| dtdp-4-dehydrorhamnose 3,5-epimerase, dtdp-dehydrorhamnose
reductase [Corynebacterium tuberculostearicum SK141]
Length = 451
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ---DVFVQDNHSFSFDCGTIRGLHFQ 59
I + I+ D+RGWF + + + L + VQ+N SF+ G RGLH +
Sbjct: 8 IPGLLIIDLDVHGDNRGWFKENWQREKFTGLAPELASFQPVQNNISFN-HAGATRGLHAE 66
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
KLV GRIF D+R S ++G V+ E+ +++P G A+GF L
Sbjct: 67 ----PWDKLVSVAQGRIFGAWCDLREGSESFGEVVTHEVGPET--AVFVPRGVANGFQAL 120
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDI-TWPLLDTILPSVSEKDQNLPFLNQI 175
E T Y V + +S E + +++I WPL T +SEKD P L +
Sbjct: 121 EE-TSYCYLVNEHWSAEA----RYAAVNLNIVDWPLEPTE---ISEKDTQHPALEDV 169
>gi|167648878|ref|YP_001686541.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter sp. K31]
gi|167351308|gb|ABZ74043.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Caulobacter sp. K31]
Length = 189
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + + +FED RG + G + F+Q+N S + + G IRGLHFQ
Sbjct: 16 LEGTWLHRPPRFEDPRGDTGPVLVDADWRAFGWRG-FIQENQSRTPNAGVIRGLHFQSGD 74
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQA++VR + G + +A+D R SPT+G ++SA G +++P G AHG LE +
Sbjct: 75 HAQARIVRVVQGAAYSVALDPRPESPTFGRHAGAQLSARGGTLMFVPAGLAHGLQVLEPD 134
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
T V + ++ GV W D S I WP+ ++ VS+ DQ LP L ++
Sbjct: 135 TIVCWATDHPFTPIARGGVVWNDPSAAIAWPITASVS--VSDADQALPRLTDLE 186
>gi|326486425|gb|ADZ76254.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni]
Length = 181
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 9/172 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++S+ + L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTSEAIDNLLPNGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G I + VD R++SPTY + I+ +N I +P GF + +
Sbjct: 70 VKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIINQDNQQIILVPAGFGNAHYVSSES 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
YK D+ AW D+ I I WP T P +SE+D
Sbjct: 130 AVYYYKCAYKGDYADAPDQFTYAWNDERIGIDWP---TNSPILSERDILAMS 178
>gi|254246150|ref|ZP_04939471.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
PC184]
gi|124870926|gb|EAY62642.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia cenocepacia
PC184]
Length = 136
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 4/136 (2%)
Query: 41 QDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISA 100
QDNHS S G +RGLH+Q +AQ KLVR + G +FD+AVDIR++SP +G WV + +S
Sbjct: 2 QDNHSRSSK-GVLRGLHYQI-QHAQGKLVRVVEGEVFDVAVDIRKDSPNFGKWVGVVLSN 59
Query: 101 NNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP 160
+N Q+++P GFAHGF+ L + +YK TD++ EH+ + W D I I WP+ P
Sbjct: 60 DNHRQLWVPPGFAHGFVVLSEAAQFLYKTTDYWFPEHERSIVWNDPEIGIEWPI--DFEP 117
Query: 161 SVSEKDQNLPFLNQID 176
++ KD L++ +
Sbjct: 118 LLAAKDAAGKRLSEAE 133
>gi|296111855|ref|YP_003622237.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Leuconostoc kimchii IMSNU
11154]
gi|295833387|gb|ADG41268.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Leuconostoc kimchii IMSNU
11154]
Length = 198
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG + F QDN + + +G+
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFQDNKLQNNVSLSRKGVLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K + + R ++G I A+ IY+P G A+GF L
Sbjct: 78 EPWDKYISVADNGRVLGSWVDLREGDSFGHVYQTVIDASK--GIYVPRGVANGFQVLSET 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D+++ ++ V + D ++ ITW D VSE D+N P L +
Sbjct: 136 VSYSYLVNDYWALALKPKYAF-VNYADPALGITW--DDVENAEVSEADKNHPLLEDV 189
>gi|311741017|ref|ZP_07714842.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303819|gb|EFQ79897.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 451
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ---DVFVQDNHSFSFDCGTIRGLHFQ 59
I + I+ D+RGWF + + + L + VQ+N SF+ G RGLH +
Sbjct: 8 IPGLLIIDLDMHGDNRGWFKENWQREKFTGLAPELASFQPVQNNISFN-HAGATRGLHAE 66
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
KLV G+IF D+R S ++G V+ E+ +++P G A+GF L
Sbjct: 67 ----PWDKLVSVAQGKIFGAWCDLREGSESFGEVVTHEVGPET--AVFVPRGVANGFQAL 120
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDI-TWPLLDTILPSVSEKDQNLPFLNQI 175
E T Y V + +S E + +++I WPL T +SEKD+ P L ++
Sbjct: 121 EE-TSYCYLVNEHWSAEA----RYAAVNLNIVDWPLEPTE---ISEKDKQHPDLAEV 169
>gi|229551000|ref|ZP_04439725.1| possible dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus
rhamnosus LMS2-1]
gi|258538289|ref|YP_003172788.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus Lc
705]
gi|229315595|gb|EEN81568.1| possible dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus
rhamnosus LMS2-1]
gi|257149965|emb|CAR88937.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus Lc
705]
Length = 196
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV--FVQDNHSFSFDCGTIRGLHFQ 59
I+ ++I+ + D RG + + ++ + + Q N + + RGLH +
Sbjct: 14 EIDGLKIIHVKMVTDERGTVRELFRQSQHSQVLVNPNMAWKQVNLTRTKRGAV-RGLHGE 72
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
A +KLV G F VD RR+SPT G V++ ++ Q+++P G +GF +
Sbjct: 73 ----AMSKLVTVAHGEAFGAYVDTRRDSPTLGSVVTVRLTPGV--QVFVPQGVCNGFQAV 126
Query: 120 EMNTEVIYKVTDFYSVEHDS-GVAWQDKSIDITWP--LLDTILPSVSEKDQNLPFLNQI 175
+TE +Y + + + D + I WP + L +S+KD P L ++
Sbjct: 127 ADDTEYLYFFDNEWEKGMSGVALTPLDPDLGIEWPIAIKPDNLAQISKKDSEAPTLKEV 185
>gi|257882807|ref|ZP_05662460.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Enterococcus faecium
1,231,502]
gi|257818465|gb|EEV45793.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Enterococcus faecium
1,231,502]
Length = 171
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V++ KF D RG+ + ++ L +G++ Q N FS + T+RGLH+Q +AQ
Sbjct: 6 VKVFDIIKFSDFRGYTAVALDNETLFSIGIEFHIKQINQGFSHNKYTMRGLHYQSGEHAQ 65
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
K+V C+ G I +IA+DIR+ S TYGC +S +NG YIP G+AHG++T+E NT V
Sbjct: 66 GKIVMCLHGEIMNIALDIRQGSSTYGCVYVNTLSESNGKCAYIPRGYAHGYLTMEDNTLV 125
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
+ V + ++ +++ +S+DI WP+ +SEKD+N L+
Sbjct: 126 QWCVDNDFNSNAAKCISY--ESVDIEWPVS-RQCFVISEKDKNGERLS 170
>gi|253572888|ref|ZP_04850286.1| LOW QUALITY PROTEIN: dTDP-4-dehydrorhamnose 3,5-epimerase
[Bacteroides sp. 1_1_6]
gi|251837520|gb|EES65613.1| LOW QUALITY PROTEIN: dTDP-4-dehydrorhamnose 3,5-epimerase
[Bacteroides sp. 1_1_6]
Length = 125
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 39/164 (23%)
Query: 16 DSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGR 75
D RG+F ++++ L VR I G
Sbjct: 1 DDRGYFFESFAQSKL--------------------------------------VRVIKGA 22
Query: 76 IFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSV 135
+ D+AVDIR+ SPT+G +VS+E++ N Q +IP GFAHGF L YK +FYS
Sbjct: 23 VLDVAVDIRKGSPTFGQYVSVELTGENHRQFFIPRGFAHGFSVLSEGMIFQYKCDNFYSP 82
Query: 136 EHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ + +AW D ++I W + + +SEKD P L + F
Sbjct: 83 QSEGAIAWNDPDLNIDWRIPAEKV-VLSEKDGKHPRLKDWQNVF 125
>gi|326486489|gb|ADZ76315.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni]
Length = 181
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+N V I+ KF D RG ++ + L L + + + + +RG+H
Sbjct: 13 LNGVYIITPNKFSDLRGDIWTAFTDEYLSNLVPNGIKFKHDKFINSHFNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV C+ G + + VD R++SPTY W IS N I +P +
Sbjct: 70 VKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEKFIISPRNQQLILLPPNMGNSHYVSSKE 129
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
YK+ ++ AW DK I I WP T P +SE+D
Sbjct: 130 AVYYYKLAYKGEYLDAPDQFTYAWNDKRIAIDWP---TNSPILSERD 173
>gi|312862914|ref|ZP_07723154.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
vestibularis F0396]
gi|311101774|gb|EFQ59977.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
vestibularis F0396]
Length = 197
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPKSFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGETFGKTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VNYADPSLDIKW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|258507102|ref|YP_003169853.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
gi|257147029|emb|CAR86002.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus GG]
gi|259648472|dbj|BAI40634.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus
rhamnosus GG]
Length = 196
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV--FVQDNHSFSFDCGTIRGLHFQ 59
I+ ++I+ + D RG + + ++ + + Q N + + RGLH +
Sbjct: 14 EIDGLKIIHVKMVTDERGTVRELFRQSQHSQVLVNPNMAWKQVNLTRTKRGAV-RGLHGE 72
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
A +KLV G F VD RR+SPT G V++ ++ Q+++P G +GF +
Sbjct: 73 ----AMSKLVTVAHGEAFGAYVDTRRDSPTLGSVVTVRLTPGV--QVFVPQGVCNGFQAV 126
Query: 120 EMNTEVIYKVTDFYSVEHDS-GVAWQDKSIDITWP--LLDTILPSVSEKDQNLPFLNQI 175
+TE +Y + + + D + I WP + L +S+KD P L ++
Sbjct: 127 ADDTEYLYFFDNEWQKGMTGVALTPLDPDLGIEWPIAIKPDNLAQISKKDSEAPTLKEV 185
>gi|3907611|gb|AAC78675.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase Cps19aM [Streptococcus
pneumoniae]
gi|68643373|emb|CAI33635.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 198
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAAGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + + + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNVYQTEI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|322516602|ref|ZP_08069516.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus vestibularis
ATCC 49124]
gi|322124872|gb|EFX96296.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus vestibularis
ATCC 49124]
Length = 197
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VNYADPSLDIKW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|281490685|ref|YP_003352665.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactococcus lactis subsp.
lactis KF147]
gi|281374454|gb|ADA63975.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactococcus lactis subsp.
lactis KF147]
Length = 197
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMMPLGFPESFFAEEKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G A R +G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGSVLGAWVDLREGENFGHVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--ENVENAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|48474180|dbj|BAD22650.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus mitis]
Length = 197
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G EI A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNVYQTEIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D++ P L
Sbjct: 131 VLSDTVAYSYLVNDYWALELKPKYAF-VNYADPALGIEW--ENLEAAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|15672178|ref|NP_266352.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Lactococcus lactis subsp.
lactis Il1403]
gi|116511026|ref|YP_808242.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Lactococcus lactis subsp.
cremoris SK11]
gi|12723050|gb|AAK04294.1|AE006257_4 dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Lactococcus lactis subsp.
lactis Il1403]
gi|116106680|gb|ABJ71820.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Lactococcus
lactis subsp. cremoris SK11]
Length = 197
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMMPLGFPESFFAEEKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G A R +G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGSVLGAWVDLREGENFGHVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W D VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--EDVENAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|228476886|ref|ZP_04061531.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus salivarius
SK126]
gi|228251460|gb|EEK10605.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus salivarius
SK126]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLSDKVSYSYLVNDYWALELKPKYAF-VNYADPSLDIKW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|322392751|ref|ZP_08066210.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus peroris ATCC
700780]
gi|321144389|gb|EFX39791.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus peroris ATCC
700780]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 17/182 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFRDGKLQNNISFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G A R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGAWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS---VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
L Y V D+++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKSKYVFVNYADPALGIEW--ENLAEAEVSEADKNHPLLKD 188
Query: 175 ID 176
+
Sbjct: 189 VK 190
>gi|322374910|ref|ZP_08049424.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
sp. C300]
gi|321280410|gb|EFX57449.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
sp. C300]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G EI A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNVYQTEIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|307710513|ref|ZP_07646950.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus mitis SK564]
gi|307618776|gb|EFN97915.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus mitis SK564]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKQVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENLAEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|125623084|ref|YP_001031567.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Lactococcus lactis subsp.
cremoris MG1363]
gi|27462666|gb|AAO15543.1|AF458777_2 RfbC [Lactococcus lactis subsp. cremoris MG1363]
gi|124491892|emb|CAL96813.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Lactococcus lactis subsp.
cremoris MG1363]
gi|300069832|gb|ADJ59232.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMMPLGFPESFFAEEKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G A R +G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGSVLGAWVDLREGENFGHVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W D VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--EDVENAEVSEADKNHPMLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|319947197|ref|ZP_08021431.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus australis ATCC
700641]
gi|319747245|gb|EFV99504.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus australis ATCC
700641]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFSRKH-VLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VNYADPSLDIQW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|69246547|ref|ZP_00603993.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Enterococcus faecium
DO]
gi|258616579|ref|ZP_05714349.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Enterococcus faecium DO]
gi|68195215|gb|EAN09670.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Enterococcus faecium
DO]
Length = 167
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 3/167 (1%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V++ KF D RG+ + +++L G++ Q N FS + T+RGLH+Q +AQ
Sbjct: 2 VQVFDIMKFADFRGYTAVALDNEILSFFGIEFHIKQINQGFSHNKYTMRGLHYQSGEHAQ 61
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
K+V C+ G I +IA+DIR S YG ++ NG YIP GFAHG++T+E NT V
Sbjct: 62 GKIVMCLRGEIMNIALDIRPESLNYGGVYVSILNERNGKCAYIPRGFAHGYLTMEDNTFV 121
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ V + ++ E V++ +SIDI WP+ D +SEKD+N L
Sbjct: 122 QWCVDNDFNAESAKCVSY--ESIDIEWPV-DQQKFIISEKDKNGDML 165
>gi|116627495|ref|YP_820114.1| dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme
[Streptococcus thermophilus LMD-9]
gi|116100772|gb|ABJ65918.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus thermophilus
LMD-9]
gi|312278013|gb|ADQ62670.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus thermophilus
ND03]
Length = 191
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 10/177 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ + I++ + D RG + + ++ + Q N + + RGLH +
Sbjct: 14 EIDGLYIIQPKTVTDERGTVRELFRFSAYSDILPSTTWSQINLTQTKKGAV-RGLHAE-- 70
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ +KLV G F + VDIR +S ++G V++++ Q+++P G +GF LE
Sbjct: 71 --SMSKLVTVAKGSAFGVYVDIRNDSTSFGKIVTVDLYPGV--QVFVPNGVCNGFQALEN 126
Query: 122 NTEVIYKVTDFYSVEHDS-GVAWQDKSIDITWPLL--DTILPSVSEKDQNLPFLNQI 175
NTE +Y + ++ + I WP+ L +SEKD P L I
Sbjct: 127 NTEYLYFFDSEWIPGMSGQALSPLASDLKIEWPIPINPNNLEQISEKDLKAPTLQDI 183
>gi|121611332|ref|YP_999139.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Verminephrobacter eiseniae
EF01-2]
gi|121555972|gb|ABM60121.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Verminephrobacter eiseniae
EF01-2]
Length = 218
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 35/199 (17%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL------------------------- 35
+ + + ++ + D RG F++ + ++ L++ L
Sbjct: 9 LPLAGLLRVQRQPLVDERGAFARLFCAQELRDGMLDGMPDGAAGVAGAAPGAAGNGPPHG 68
Query: 36 -------QDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSP 88
Q NHS + GT+RGLH+QRPP+A+ KLV C+ G ++D+A+D+R+ SP
Sbjct: 69 PTAWLAPPAQIAQINHSHTALRGTLRGLHYQRPPHAEGKLVSCLRGAVWDVALDLRQGSP 128
Query: 89 TYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSI 148
T+ W + +SA+NG + IP GFAHGF L + E++Y ++ +G+ + +
Sbjct: 129 TFLHWHAECLSADNGCALLIPPGFAHGFQALTDDAELLYCHWCAHAPAAQAGLHPLEPRL 188
Query: 149 DITWPLLDTILPSVSEKDQ 167
I WPL +S +D
Sbjct: 189 AIGWPLPAGR---ISPRDA 204
>gi|326405772|gb|ADZ62843.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactococcus lactis subsp.
lactis CV56]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMMPLGFPKSFFAEEKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGSVLGSWVDLREGESFGNVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W D VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--EDVENAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|121310080|dbj|BAF44345.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus oralis]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G EI A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNVYQTEIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|284988977|ref|YP_003407531.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geodermatophilus obscurus DSM
43160]
gi|284062222|gb|ADB73160.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Geodermatophilus obscurus DSM
43160]
Length = 187
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 2 NINPVRILKTR-KFEDSRGWFSQTYSSKLLKELGLQDV-FVQDNHSFSFDCGTIRGLHFQ 59
+ V + ED RGWF +T + G+ F+QD+ S S G +RG+H +
Sbjct: 7 ELADVVCFLPETRHEDERGWFVRTLDVAVADRAGVDARAFLQDSQSRSRQ-GVLRGMHGR 65
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+AKLVRC G + D+ VD R +SPT+G + + G +Y+P GF HGF L
Sbjct: 66 -AGAGEAKLVRCARGAVLDVLVDTRPSSPTFGRSATFRLDDETGRHLYVPPGFLHGFQVL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+V Y++ + D V + D + + WPL T +S +D + +
Sbjct: 125 TPEADVCYRIDREHDPSEDLAVRYDDPDLALPWPLPVTA---ISPRDAAAGTWHDL 177
>gi|218507928|ref|ZP_03505806.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli Brasil
5]
Length = 136
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 85/128 (66%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + + +F D RG+FS+ + +E FVQDN S S GT+RGLHFQ P
Sbjct: 8 IEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRGLHFQISP 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+AQ KLVRC+AGRI D+ VDIR SP+YG W+S E+S + G Q++IP GFAHGF T+E N
Sbjct: 68 FAQGKLVRCLAGRIMDVVVDIRVGSPSYGQWLSQELSPDTGKQLWIPAGFAHGFATIEPN 127
Query: 123 TEVIYKVT 130
+ + YKVT
Sbjct: 128 SVISYKVT 135
>gi|110349044|gb|ABG73088.1| RfbC [Rhizobium leguminosarum bv. trifolii TA1]
Length = 142
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 77 FDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVE 136
D+ VDIR SP++G W+S E+S NG+Q+++P GFAHGF TLE N+ + YKVT YS +
Sbjct: 1 MDVVVDIREGSPSFGKWLSQELSPENGMQLWVPAGFAHGFATLEPNSVISYKVTAPYSPQ 60
Query: 137 HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLPLLSLNMERDLL 196
HD G+AW D +I I WP + + S S+KD+ LP L + + F P+ N D
Sbjct: 61 HDRGIAWNDPAIGIRWPFDERDMVS-SDKDKTLPRLTDLQAIF-----PIQHSNPRIDRR 114
Query: 197 C 197
C
Sbjct: 115 C 115
>gi|153806438|ref|ZP_01959106.1| hypothetical protein BACCAC_00702 [Bacteroides caccae ATCC 43185]
gi|149131115|gb|EDM22321.1| hypothetical protein BACCAC_00702 [Bacteroides caccae ATCC 43185]
Length = 189
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
++ + D RG F + Y+ L K+ G+ + ++ S G IR HFQ
Sbjct: 11 SLKGAYEIIPFYATDERGGFVKDYNIDLFKQNGIDHELKEVFYTISKK-GVIRATHFQLV 69
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLVRCI+G ++D+ VD+R +SPT+G W +++ +N +Y+P F HG++ LE
Sbjct: 70 KQQA-KLVRCISGHVYDVIVDLRPDSPTFGKWQGFDLTGDNQKTLYVPQFFGHGYLVLED 128
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD---TILPSVSEKDQNLPFLN 173
+ V YK + + E DSG+ + D I+I WP ++SEKD +L
Sbjct: 129 -SIVSYKCGEVFYGEGDSGIMYNDPDINIEWPFEKIGGIENLTISEKDTHLMSFK 182
>gi|18376704|gb|AAL68427.1| dTDP 4-keto 6-deoxyglucose 3,5-epimerase [Streptococcus pneumoniae]
gi|68643747|emb|CAI33949.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|149929318|gb|ABR37232.1| RmlC [Streptococcus pneumoniae]
gi|312176762|gb|ADQ39189.1| RmlC [Streptococcus pneumoniae]
Length = 198
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|148988116|ref|ZP_01819579.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP6-BS73]
gi|13377431|gb|AAK20692.1|AF316640_12 RmlC [Streptococcus pneumoniae]
gi|68642408|emb|CAI32826.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643603|emb|CAI33826.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643631|emb|CAI33849.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643659|emb|CAI33871.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643687|emb|CAI33896.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68644530|emb|CAI34597.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|147926580|gb|EDK77653.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP6-BS73]
Length = 197
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|55821250|ref|YP_139692.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMG
18311]
gi|55823162|ref|YP_141603.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus
CNRZ1066]
gi|116627989|ref|YP_820608.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMD-9]
gi|55737235|gb|AAV60877.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMG
18311]
gi|55739147|gb|AAV62788.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus
CNRZ1066]
gi|116101266|gb|ABJ66412.1| dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme
[Streptococcus thermophilus LMD-9]
gi|312278578|gb|ADQ63235.1| dTDP-4-dehydrorhamnose 3,5-epimerase enzyme-like protein
[Streptococcus thermophilus ND03]
Length = 197
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFTEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGAWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N PFL
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VNYADPSLDIEW--ENLEEAEVSEADKNHPFLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|270293359|ref|ZP_06199568.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
sp. M143]
gi|270278208|gb|EFA24056.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
sp. M143]
Length = 198
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + + + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADNGKVLGSWVDLREGETFGNVYQTEI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D + I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYSDPELGIEW--ENLEEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|15902365|ref|NP_357915.1| hypothetical protein spr0321 [Streptococcus pneumoniae R6]
gi|116517185|ref|YP_815844.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae D39]
gi|4200434|gb|AAD10182.1| Cps2M [Streptococcus pneumoniae D39]
gi|15457876|gb|AAK99125.1| The type 2 capsule locus of Streptococcus pneumoniae [Streptococcus
pneumoniae R6]
gi|68642308|emb|CAI32733.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|116077761|gb|ABJ55481.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae D39]
Length = 197
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + ++ LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMEPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTIIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|326692662|ref|ZP_08229667.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leuconostoc argentinum KCTC
3773]
Length = 197
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGL 56
I + D+RGWF + + + + LG F Q+N SFS G +RGL
Sbjct: 17 EIPGMLEFDIPVHGDNRGWFKENFQKEKMVPLGFPASFFAEGKLQNNVSFS-RQGVLRGL 75
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + K + A R ++G I A+ I++P G A+GF
Sbjct: 76 HAE----PWDKYISVADNGKVLGAWVDLRAGESFGHVYQTVIDASK--GIFVPRGVANGF 129
Query: 117 MTLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
L Y V D+++ ++ V + D ++ I W D VSE D+N P L
Sbjct: 130 QVLSETVSYSYLVNDYWALELKPKYAF-VNYADPTLGIEW--ADVAHAEVSEADKNHPLL 186
Query: 173 NQI 175
+
Sbjct: 187 KDV 189
>gi|304388886|ref|ZP_07370935.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis ATCC
13091]
gi|304337147|gb|EFM03332.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis ATCC
13091]
Length = 117
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ Q KLVR + G +FD+AVD+R++SPT+G WV +SA N Q+++P GFAHGF L
Sbjct: 1 QTENTQGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFYVL 60
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
E +YK TD+Y+ + + + W D ++ I WPL P++S KD L +
Sbjct: 61 SDEAEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGE--PNLSPKDLAGKVLAEA 114
>gi|153952059|ref|YP_001397852.1| putative nucleotidyl-sugar epimerase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939505|gb|ABS44246.1| putative nucleotidyl-sugar epimerase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 177
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 11/170 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+K KF+D RG ++ + L F D S IRG+H
Sbjct: 13 LKGVFIIKPNKFKDLRGEIWTAFTQEQL-AHLAPVPFKHDKFITS-KKDVIRGIHGD--- 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G I + VD R +SPTY + S I+ N L I +P GF + +
Sbjct: 68 TKTYKLATCLYGEILQVVVDCREDSPTYLKYESFVINPQNQLLILVPKGFGNAHLVRSNE 127
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
YK ++ E AW D+ I + W + P++SE+D
Sbjct: 128 AVYYYKCAYEGEYVDAEEQFTYAWNDERIGVKWGVEK---PTLSERDIRA 174
>gi|168494599|ref|ZP_02718742.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC3059-06]
gi|169833448|ref|YP_001693877.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|298255292|ref|ZP_06978878.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502160|ref|YP_003724100.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
TCH8431/19A]
gi|168995950|gb|ACA36562.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|183575494|gb|EDT96022.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC3059-06]
gi|298237755|gb|ADI68886.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
TCH8431/19A]
gi|332203522|gb|EGJ17589.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Streptococcus
pneumoniae GA47368]
Length = 197
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAAGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + + + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNVYQTEI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIEW--ENLAEAEVSEADKHHPLLR 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|57505201|ref|ZP_00371130.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase, putative
[Campylobacter upsaliensis RM3195]
gi|57016337|gb|EAL53122.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase, putative
[Campylobacter upsaliensis RM3195]
Length = 177
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 11/170 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+K KF+D RG ++ + L F D S IRG+H
Sbjct: 13 LKGVFIIKPNKFKDLRGEIWTAFTQEQLV-HLAPVPFKHDKFITS-KKDVIRGIHGD--- 67
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KL C+ G I + VD R +SPTY + S I+ N L I +P GF + +
Sbjct: 68 TKTYKLATCLYGEILQVVVDCREDSPTYLKYESFVINPQNQLLILVPKGFGNAHLVRSNE 127
Query: 123 TEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNL 169
YK ++ E AW D+ I + W + P +SE+D
Sbjct: 128 AVYYYKCAYEGEYVDAEEQFTYAWNDERIGVKWGVEK---PILSERDIRA 174
>gi|229821452|ref|YP_002882978.1| dTDP-4-dehydrorhamnose 35-epimerase related [Beutenbergia cavernae
DSM 12333]
gi|229567365|gb|ACQ81216.1| dTDP-4-dehydrorhamnose 35-epimerase related [Beutenbergia cavernae
DSM 12333]
Length = 189
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + +L ++ D RG + + + + E GL Q + G IRGLH +
Sbjct: 16 IDGLHVLHVKEIHDERGTIREFFRASAMAEAGLHGGAWQQLNLTETSRGAIRGLHGE--- 72
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
KLV +AG+ F VD R S T G V++ ++ G+Q+ +P G +GF L
Sbjct: 73 -QMTKLVSVVAGQAFGAYVDARPGSATAGAVVTVPLT--LGVQVLVPPGVCNGFQALADG 129
Query: 123 TEVIYKVTDFYSVEHD-SGVAWQDKSIDITWPL--LDTILPSVSEKDQNLPFLNQI 175
T+ +Y + V D ++ I WP+ +S KD LP L +
Sbjct: 130 TQYLYCFDAEWVPGMPGRAVHPLDPALGIAWPIAVDPADRERLSAKDAGLPSLADV 185
>gi|315221452|ref|ZP_07863373.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
anginosus F0211]
gi|315189571|gb|EFU23265.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
anginosus F0211]
Length = 197
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMVPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIEW--ENLDQAEVSEADKNHPMLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|261208595|ref|ZP_05923032.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289567166|ref|ZP_06447557.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|260077097|gb|EEW64817.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289161052|gb|EFD08961.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
Length = 171
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V++ KF D RG+ + ++ L +G++ Q N FS + T+RGLH+Q +AQ
Sbjct: 6 VKVFDIIKFSDFRGYTAVALDNETLFSIGIEFHIKQINQGFSHNKYTMRGLHYQSGEHAQ 65
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
K+V C+ G I +IA+DIR+ S TYGC +S +NG YIP G+AHG++T+E NT V
Sbjct: 66 GKIVMCLHGEIMNIALDIRQGSSTYGCVYVNTLSESNGKCAYIPRGYAHGYLTMEDNTLV 125
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
+ V + ++ +++ +S+DI WP+ +SEKD+N
Sbjct: 126 QWCVDNDFNSNAAKCISY--ESVDIEWPVS-RQCFVISEKDKN 165
>gi|2804709|gb|AAC38694.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
Length = 197
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHRDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|2804684|gb|AAC38673.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
Length = 198
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVQGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|307708206|ref|ZP_07644673.1| RmlC [Streptococcus mitis NCTC 12261]
gi|307615652|gb|EFN94858.1| RmlC [Streptococcus mitis NCTC 12261]
Length = 197
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPEYFFTEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D + I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALDLKPKYAF-VNYADPELGIEW--ANLAEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|68644633|emb|CAI34684.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 197
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTASYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENLEEADVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|332077647|gb|EGI88108.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Streptococcus
pneumoniae GA41301]
Length = 197
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIKW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|68643965|emb|CAI34132.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643995|emb|CAI34158.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 198
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGKTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTASYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENLEEADVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|4406250|gb|AAD19914.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
Length = 197
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAAGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + + + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNVYQTEI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIEW--ENLPEAEVSEADKHHPLLR 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|329117726|ref|ZP_08246443.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
parauberis NCFD 2020]
gi|326908131|gb|EGE55045.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
parauberis NCFD 2020]
Length = 197
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLIEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFDEGKLQNNVSFSRKH-VLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGESFGNVYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VS+ D+N P L
Sbjct: 131 VLSDKVSYSYLVNDYWALDLKPKYAF-VNYADPTLGIKW--ENLDQAEVSDADKNHPMLK 187
Query: 174 QI 175
+
Sbjct: 188 DV 189
>gi|68643208|emb|CAI33496.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 198
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPASFFTEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|68642487|emb|CAI32893.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68644360|emb|CAI34458.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 198
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPASFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|223933262|ref|ZP_03625252.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Streptococcus
suis 89/1591]
gi|302024035|ref|ZP_07249246.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis 05HAS68]
gi|330832506|ref|YP_004401331.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus suis ST3]
gi|223898076|gb|EEF64447.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Streptococcus
suis 89/1591]
gi|329306729|gb|AEB81145.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus suis ST3]
Length = 197
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLSDFVAYSYLVNDYWALELKPKYAF-VNYADPSLDIQW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|68643432|emb|CAI33683.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 197
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|68642514|emb|CAI32914.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643402|emb|CAI33658.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 198
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|149012102|ref|ZP_01833211.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP19-BS75]
gi|194397415|ref|YP_002037041.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC [Streptococcus
pneumoniae G54]
gi|1881545|gb|AAC44970.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|2804690|gb|AAC38678.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|2804696|gb|AAC38683.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|2804703|gb|AAC38689.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|2804715|gb|AAC38699.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|68643459|emb|CAI33704.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68644416|emb|CAI34505.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|147763704|gb|EDK70638.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP19-BS75]
gi|194357082|gb|ACF55530.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase rmlC [Streptococcus
pneumoniae G54]
Length = 198
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|149018053|ref|ZP_01834512.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP23-BS72]
gi|168482595|ref|ZP_02707547.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1873-00]
gi|168485501|ref|ZP_02710009.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|168486647|ref|ZP_02711155.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|168487599|ref|ZP_02712107.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|3818497|gb|AAC69539.1| Cps23fP [Streptococcus pneumoniae]
gi|68642460|emb|CAI32870.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68642542|emb|CAI32938.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643148|emb|CAI33448.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643178|emb|CAI33472.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643237|emb|CAI33519.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643265|emb|CAI33543.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643349|emb|CAI33616.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643545|emb|CAI33779.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643575|emb|CAI33803.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643824|emb|CAI34015.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643935|emb|CAI34106.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68644387|emb|CAI34482.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|147931617|gb|EDK82595.1| dTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus
pneumoniae SP23-BS72]
gi|172043815|gb|EDT51861.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1873-00]
gi|183569609|gb|EDT90137.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|183570376|gb|EDT90904.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|183571251|gb|EDT91779.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
CDC1087-00]
Length = 197
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|222153258|ref|YP_002562435.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus uberis
0140J]
gi|222114071|emb|CAR42478.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
uberis 0140J]
Length = 197
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLIEFDIPVHGDNRGWFKENFQKEKMIPLGFPESFFAEDKLQNNVSFSRKH-VLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGDSFGQVYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S++I W + VSE D+N PFL
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VNYADPSLNIAW--ENLEEAEVSEADKNHPFLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|255025971|ref|ZP_05297957.1| hypothetical protein LmonocytFSL_05760 [Listeria monocytogenes FSL
J2-003]
Length = 99
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 83 IRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVA 142
+R+ SPTYG W +S N Q+ +P GFAHGF T+ N V+YKV YS E+D+G+A
Sbjct: 1 MRKGSPTYGEWEGYILSEANKHQLLVPQGFAHGFCTITENVNVLYKVDQLYSPENDAGIA 60
Query: 143 WQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+ D ++ITWP +S+KD P L ++ F ++
Sbjct: 61 YDDPDLNITWPTDK---LILSDKDTKHPRLKDAENNFVWE 97
>gi|309952140|gb|ADO95349.1| RmlC [Streptococcus pneumoniae]
Length = 198
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N S S +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSLS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|161367407|gb|ABX71133.1| Lct50 [Streptomyces rishiriensis]
Length = 161
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+++ ++ D RG F ++ LL++ LG +Q N S S T+RG+H
Sbjct: 6 LSVPGAYVITPDIHPDPRGDFFESLRVDLLEDVLGHAFRPLQVNCSTS-RRNTLRGIHSV 64
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
P QAK V C+ G + DI VD+R SP +G + A +G +Y+P G HGF+TL
Sbjct: 65 TSPPGQAKYVTCVRGSVRDIVVDLRPGSPAFGSHAVNVLDAASGRAVYVPEGVGHGFLTL 124
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDK 146
++ V Y + Y V D
Sbjct: 125 ADDSCVCYVLDSVYVPGTQIDVDPLDP 151
>gi|293364790|ref|ZP_06611507.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus oralis ATCC
35037]
gi|307703039|ref|ZP_07639986.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus oralis ATCC
35037]
gi|291316240|gb|EFE56676.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus oralis ATCC
35037]
gi|307623432|gb|EFO02422.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus oralis ATCC
35037]
Length = 197
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G EI A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNVYQTEIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|153878062|ref|ZP_02004470.1| truncated dTDP-4-dehydrorhamnose 3,5-epimerase [Beggiatoa sp. PS]
gi|152065474|gb|EDN65530.1| truncated dTDP-4-dehydrorhamnose 3,5-epimerase [Beggiatoa sp. PS]
Length = 116
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ Y Q KLV G +FD+AVDIR++SPT+G WV + +SA Q Y+P G AHGF +
Sbjct: 4 QKQYPQGKLVYVTQGTVFDVAVDIRKDSPTFGKWVGITLSAEKHQQFYVPPGLAHGFCVV 63
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
+ YK TD+Y E + + W D I I WP+ P +S KD N P+L
Sbjct: 64 SEQADFHYKCTDYYHQEDEGCIRWDDPDIGIDWPITH---PLLSTKDANAPYLKD 115
>gi|251782676|ref|YP_002996979.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391306|dbj|BAH81765.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 197
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGL 56
I + D+RGWF + + + + +G + F Q+N SFS +RGL
Sbjct: 17 EIPGLLEFDIPVRGDNRGWFKENFQKEKMLPIGFPERFFEEGKLQNNVSFSRQH-VLRGL 75
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + + G++ VD+R + ++ + +++P G A+GF
Sbjct: 76 HAEPWDKY---ISVADDGKVLGAWVDLREGETFGNVYQTVI---DASKGMFVPRGVANGF 129
Query: 117 MTLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
L Y V D+++ ++ V + D S+ ITW + VSE D+N P L
Sbjct: 130 QVLSETVSYSYLVNDYWALDLKPKYAF-VNYADPSLGITW--ENLAAAEVSEADKNHPLL 186
Query: 173 NQID 176
+ +
Sbjct: 187 SDVK 190
>gi|56807813|ref|ZP_00365660.1| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Streptococcus pyogenes M49 591]
Length = 197
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGL 56
I + D+RGWF + + + + +G + F Q+N SFS +RGL
Sbjct: 17 EIPGLLEFDIPVRGDNRGWFKENFQKEKMLPIGFPERFFEEGKLQNNVSFSRQH-VLRGL 75
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + + G++ VD+R + ++ + +++P G A+GF
Sbjct: 76 HAEPWDKY---ISVADDGKVLGAWVDLREGETFGNVYQTVI---DASKGMFVPRGVANGF 129
Query: 117 MTLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
L Y V D+++ ++ V + D S+ ITW + VSE D+N P L
Sbjct: 130 QVLSETVSYSYLVNDYWALDLKPKYAF-VNYADPSLGITW--ENLAAAEVSEADKNHPLL 186
Query: 173 NQID 176
+ +
Sbjct: 187 SDLK 190
>gi|288905035|ref|YP_003430257.1| dTDP 4-keto 6-deoxyglucose 3,5-epimerase [Streptococcus
gallolyticus UCN34]
gi|306831108|ref|ZP_07464269.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325978004|ref|YP_004287720.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731761|emb|CBI13322.1| putative dTDP 4-keto 6-deoxyglucose 3,5-epimerase [Streptococcus
gallolyticus UCN34]
gi|304426674|gb|EFM29785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325177932|emb|CBZ47976.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 197
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMVPLGFPESFFAEGKLQNNVSFS-HKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADEGKVLGSWVDLREGDSFGHVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--ENLEAAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|228996409|ref|ZP_04156051.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus mycoides Rock3-17]
gi|228763372|gb|EEM12277.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus mycoides Rock3-17]
Length = 132
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 61/133 (45%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 52 TIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTG 111
IRGLHFQ P AQ KLV+ I G IFD+ VD+R+ SPTY W S ++ +N + +P G
Sbjct: 1 MIRGLHFQLEPRAQTKLVQVIQGAIFDVIVDLRKGSPTYKKWQSFLLTGDNHRLLLVPKG 60
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
FAHGF TL +T V YKV +FY DSG+AW D+ I+WP+ + P +SEKD LP
Sbjct: 61 FAHGFCTLVPHTIVHYKVDEFYDASCDSGIAWNDEEFAISWPVSN---PILSEKDGMLPK 117
Query: 172 LNQIDSPFEYDGL 184
+ F++ +
Sbjct: 118 FTETTHYFQFKEI 130
>gi|209559281|ref|YP_002285753.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes NZ131]
gi|209540482|gb|ACI61058.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes NZ131]
Length = 197
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGL 56
I + D+RGWF + + + + +G + F Q+N SFS +RGL
Sbjct: 17 EIPGLLEFDIPVRGDNRGWFKENFQKEKMLPIGFPERFFEEGKLQNNVSFSRQH-VLRGL 75
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + + G++ VD+R + ++ + +++P G A+GF
Sbjct: 76 HAEPWDKY---ISVADDGKVLGAWVDLREGETFGNVYQTVI---DASKGMFVPRGVANGF 129
Query: 117 MTLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
L Y V D+++ ++ V + D S+ ITW + VSE D+N P L
Sbjct: 130 QVLSETVSYSYLVNDYWALDLKPKYAF-VNYADPSLGITW--ENLAAAEVSEADKNHPLL 186
Query: 173 NQID 176
+ +
Sbjct: 187 SDVK 190
>gi|15674954|ref|NP_269128.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes M1
GAS]
gi|19745996|ref|NP_607132.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS8232]
gi|21910183|ref|NP_664451.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS315]
gi|28896117|ref|NP_802467.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes SSI-1]
gi|50914107|ref|YP_060079.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS10394]
gi|71903380|ref|YP_280183.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS6180]
gi|71910548|ref|YP_282098.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS5005]
gi|94988424|ref|YP_596525.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS9429]
gi|94990303|ref|YP_598403.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS10270]
gi|94994225|ref|YP_602323.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS10750]
gi|139473906|ref|YP_001128622.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes str.
Manfredo]
gi|81372133|sp|Q5XCG7|RMLC_STRP6 RecName: Full=Probable dTDP-4-dehydrorhamnose 3,5-epimerase;
AltName: Full=Thymidine diphospho-4-keto-rhamnose
3,5-epimerase; AltName: Full=dTDP-4-keto-6-deoxyglucose
3,5-epimerase; AltName:
Full=dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase;
AltName: Full=dTDP-L-rhamnose synthase
gi|13622099|gb|AAK33849.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
pyogenes M1 GAS]
gi|19748159|gb|AAL97631.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
pyogenes MGAS8232]
gi|21904376|gb|AAM79254.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
pyogenes MGAS315]
gi|28811367|dbj|BAC64300.1| putative dTDP-4-keto-6-deoxyglucose-3,5- epimerase [Streptococcus
pyogenes SSI-1]
gi|50903181|gb|AAT86896.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS10394]
gi|71802475|gb|AAX71828.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS6180]
gi|71853330|gb|AAZ51353.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS5005]
gi|94541932|gb|ABF31981.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS9429]
gi|94543811|gb|ABF33859.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS10270]
gi|94547733|gb|ABF37779.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS10750]
gi|134272153|emb|CAM30398.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
pyogenes str. Manfredo]
gi|323127496|gb|ADX24793.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 197
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGL 56
I + D+RGWF + + + + +G + F Q+N SFS +RGL
Sbjct: 17 EIPGLLEFDIPVRGDNRGWFKENFQKEKMLPIGFPERFFEEGKLQNNVSFSRQH-VLRGL 75
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + + G++ VD+R + ++ + +++P G A+GF
Sbjct: 76 HAEPWDKY---ISVADDGKVLGAWVDLREGETFGNVYQTVI---DASKGMFVPRGVANGF 129
Query: 117 MTLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
L Y V D+++ ++ V + D S+ ITW + VSE D+N P L
Sbjct: 130 QVLSETVSYSYLVNDYWALDLKPKYAF-VNYADPSLGITW--ENLAAAEVSEADKNHPLL 186
Query: 173 NQID 176
+ +
Sbjct: 187 SDVK 190
>gi|320546508|ref|ZP_08040823.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus equinus ATCC
9812]
gi|320448893|gb|EFW89621.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus equinus ATCC
9812]
Length = 198
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-HKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADEGKVLGSWVDLREGESFGHVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDKVSYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|319939395|ref|ZP_08013755.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase rmlC [Streptococcus
anginosus 1_2_62CV]
gi|319811381|gb|EFW07676.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase rmlC [Streptococcus
anginosus 1_2_62CV]
Length = 197
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMVPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W VSE D+N P L
Sbjct: 131 VLSETVSYSYLVNDYWALELKPKYAF-VNYADPALGIEW--ESLDQAEVSEADKNHPMLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|171779671|ref|ZP_02920627.1| hypothetical protein STRINF_01508 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281773|gb|EDT47207.1| hypothetical protein STRINF_01508 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 198
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-HKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADEGKVLGSWVDLREGDSFGHVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDKVSYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|48474158|dbj|BAD22629.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus oralis]
Length = 197
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G EI A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNVYQTEIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|225860393|ref|YP_002741902.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298229716|ref|ZP_06963397.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|225726502|gb|ACO22353.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|327390775|gb|EGE89115.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Streptococcus
pneumoniae GA04375]
Length = 198
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHRDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|326407909|gb|ADZ64979.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactococcus lactis subsp.
lactis CV56]
Length = 194
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ--DVFVQDNHSFSFDCGTIRGLHFQ 59
IN ++++ ++ D+RG + Y E + Q N + + RGLH +
Sbjct: 16 KINGLQVINSKMVTDNRGTVRELYRQSSYSETLPSSVTSWKQVNLTRTKRGAV-RGLHGE 74
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
A +KLV G F + VD R S T G +++ I+ Q+++P G +GF +L
Sbjct: 75 ----AMSKLVTVAHGSAFGVYVDTRPGSETIGKVMTVNITPGV--QVFVPQGVCNGFQSL 128
Query: 120 EMNTEVIYKVTDFYSVEHDSGVA--WQDKSIDITWP--LLDTILPSVSEKDQNLPFLNQI 175
+ +TE +Y + ++ SGVA D + I WP + L +SEKD P L +I
Sbjct: 129 DDDTEYLYFFDNEWNP-RMSGVALTPLDADLKIDWPIQIDPGNLEQISEKDSRAPRLREI 187
>gi|309777800|ref|ZP_07672747.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914432|gb|EFP60225.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 168
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+++ ++K D RG F + YS + ++ + + ++ S G IR +HFQ
Sbjct: 10 LDLPDAYLIKPFISTDDRGAFIKDYSKEAFEKNNIAYDIAEVFYTIS-KKGVIRAIHFQ- 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q KLVRCI GRI+D+ VD+R SPT+ W +S N ++ IP F HG++ LE
Sbjct: 68 KVMEQPKLVRCIKGRIYDVIVDLRPKSPTFKQWRGFYLSEENNFELLIPKNFGHGYLVLE 127
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLD 156
+ V YK + + E+D+G+ W D++I+I WPL +
Sbjct: 128 D-SVVSYKCAERFYGEYDTGIMWNDETININWPLEE 162
>gi|255025970|ref|ZP_05297956.1| hypothetical protein LmonocytFSL_05755 [Listeria monocytogenes
FSL J2-003]
Length = 83
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V+++K + F D RG+F ++Y+ K E G+ F+QDNHS S + G +RG+H+Q
Sbjct: 7 KLAGVKLVKPKVFGDHRGFFMESYNEKAFHEAGIDMKFIQDNHSLSVEAGVLRGMHYQMN 66
Query: 62 PYAQAKLVRCIAGRIFD 78
P AQ KL +
Sbjct: 67 PKAQTKLFVLRQAQFMM 83
>gi|170017546|ref|YP_001728465.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leuconostoc citreum KM20]
gi|169804403|gb|ACA83021.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leuconostoc citreum KM20]
Length = 197
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 67/178 (37%), Gaps = 9/178 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + D+RGWF + + + + LG F + + + +G+
Sbjct: 17 DIPGMIEFDIPVHGDNRGWFKENFQKEKMVPLGFPIDFFAADKLQNNVSLSRQGVLRGLH 76
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + A R ++G I A+ I++P G A+GF L
Sbjct: 77 AEPWDKYISVADNGKVLGAWVDLREGESFGHVYQTVIDASK--GIFVPRGVANGFQVLSE 134
Query: 122 NTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D+++ ++ V + D ++ I W D VSE D+N P L +
Sbjct: 135 TVSYSYLVNDYWALDLKPKYAF-VNYADPTLGIAW--DDVDNAEVSEADKNHPMLKDV 189
>gi|306833215|ref|ZP_07466344.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus bovis ATCC
700338]
gi|304424582|gb|EFM27719.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus bovis ATCC
700338]
Length = 197
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMIPLGFPESFFAEGKLQNNVSFS-HKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADEGKVLGSWVDLREGDSFGHVYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VNYADPTLGIKW--ENLEAAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|13377463|gb|AAK20722.1|AF316642_16 RmlC [Streptococcus pneumoniae]
gi|68643291|emb|CAI33567.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|68643320|emb|CAI33591.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 197
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSFGIEW--ENIAEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|306827472|ref|ZP_07460756.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes ATCC
10782]
gi|304430352|gb|EFM33377.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes ATCC
10782]
Length = 197
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGL 56
I + D+RGWF + + + + +G + F Q+N SFS +RGL
Sbjct: 17 EIPGLLEFDIPVRGDNRGWFKENFQKEKMLPIGFPECFFEEGKLQNNVSFSRQH-VLRGL 75
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
H + + G++ VD+R + ++ + +++P G A+GF
Sbjct: 76 HAEPWDKY---ISVADDGKVLGAWVDLREGETFGNVYQTVI---DASKGMFVPRGVANGF 129
Query: 117 MTLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
L Y V D+++ ++ V + D S+ ITW + VSE D+N P L
Sbjct: 130 QVLSETVSYSYLVNDYWALDLKPKYAF-VNYADPSLGITW--ENLAAAEVSEADKNHPLL 186
Query: 173 NQID 176
+ +
Sbjct: 187 SDVK 190
>gi|290580173|ref|YP_003484565.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans NN2025]
gi|254997072|dbj|BAH87673.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans NN2025]
Length = 198
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 19 IPGMIEFDIPVHGDNRGWFKENFQKEKMVPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 77
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + + R ++G I A+ I++P G A+GF
Sbjct: 78 AE----PWDKYISVADEGKVLGSWVDLREGDSFGHVYQTVIDASK--GIFVPRGVANGFQ 131
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 132 VLSDKVSYSYLVNDYWALELKPKYAF-VNYADPTLGIEW--ENLAEAQVSEADKNHPLLK 188
Query: 174 QID 176
+
Sbjct: 189 DVK 191
>gi|157413775|ref|YP_001484641.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Prochlorococcus marinus str. MIT 9215]
gi|157388350|gb|ABV51055.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Prochlorococcus marinus str. MIT 9215]
Length = 161
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 72/163 (44%), Positives = 99/163 (60%), Gaps = 7/163 (4%)
Query: 22 SQTYSSKL-LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA 80
++++ K+ L L F QDN SFS G +RGLHFQ+ P+AQ KLV CI G IFD+A
Sbjct: 1 MESWNRKIILNILKKDIDFCQDNLSFSKQ-GVLRGLHFQKDPFAQDKLVSCIQGSIFDVA 59
Query: 81 VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSG 140
VD+R NS T+G WV + ++ + Q++IP GFA+GF+TL + V YK T++YS E +
Sbjct: 60 VDLRSNSKTFGKWVGVFLNDRDNEQLFIPKGFANGFLTLSESAYVKYKTTEYYSFESERY 119
Query: 141 VAWQDKSIDITWPLLDTI--LPSVSEKDQNLPFLNQIDSPFEY 181
V W DK + I WPL P VS+KD N + + F Y
Sbjct: 120 VIWNDKVLKIRWPLNKINFRNPIVSKKDSNG---DIFEKDFIY 159
>gi|312867299|ref|ZP_07727508.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
parasanguinis F0405]
gi|311097000|gb|EFQ55235.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
parasanguinis F0405]
Length = 197
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLMEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNISFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGDSFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLTDKVAYTYLVNDYWALELKPKYAF-VNYADPSLDIQW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|1813346|dbj|BAA11248.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans]
Length = 198
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 19 IPGMIEFDIPVHGDNRGWFKENFQKEKMVPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 77
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + + R ++G I A+ I++P G A+GF
Sbjct: 78 AE----PWDKYISVADEGKVLGSWVDLREGDSFGHVYQAVIDASK--GIFVPRGVANGFQ 131
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 132 VLSDKVSYSYLVNDYWALELKPKYAF-VNYADPTLGIEW--ENLAEAQVSEADKNHPLLK 188
Query: 174 QID 176
+
Sbjct: 189 DVK 191
>gi|227431063|ref|ZP_03913123.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227353183|gb|EEJ43349.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 197
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 9/177 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG F + + + + +G+
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMMPLGFPASFFKADKLQNNVSLSRQGVLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K + + R ++G I A+ IY+P G A+GF L
Sbjct: 78 EPWDKYISVADNGRVLGSWVDLREGDSFGHVYQTVIDASK--GIYVPRGVANGFQVLSET 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D+++ ++ V + D ++ I W D VSE D+N P L +
Sbjct: 136 VSYSYLVNDYWALDLKPKYAF-VNYADPALGIEW--ADVAHAEVSEADKNHPLLKDV 189
>gi|68643855|emb|CAI34040.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 197
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKYHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|146318954|ref|YP_001198666.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis 05ZYH33]
gi|146321162|ref|YP_001200873.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis 98HAH33]
gi|253752023|ref|YP_003025164.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus suis SC84]
gi|253753848|ref|YP_003026989.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus suis P1/7]
gi|253755276|ref|YP_003028416.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus suis BM407]
gi|33357526|pdb|1NXM|A Chain A, The High Resolution Structures Of Rmlc From Streptococcus
Suis
gi|33357527|pdb|1NXM|B Chain B, The High Resolution Structures Of Rmlc From Streptococcus
Suis
gi|33357534|pdb|1NYW|A Chain A, The High Resolution Structures Of Rmlc From Streptoccus
Suis In Complex With Dtdp-D-Glucose
gi|33357535|pdb|1NYW|B Chain B, The High Resolution Structures Of Rmlc From Streptoccus
Suis In Complex With Dtdp-D-Glucose
gi|33357540|pdb|1NZC|A Chain A, The High Resolution Structures Of Rmlc From Streptococcus
Suis In Complex With Dtdp-D-Xylose
gi|33357541|pdb|1NZC|B Chain B, The High Resolution Structures Of Rmlc From Streptococcus
Suis In Complex With Dtdp-D-Xylose
gi|33357542|pdb|1NZC|C Chain C, The High Resolution Structures Of Rmlc From Streptococcus
Suis In Complex With Dtdp-D-Xylose
gi|33357543|pdb|1NZC|D Chain D, The High Resolution Structures Of Rmlc From Streptococcus
Suis In Complex With Dtdp-D-Xylose
gi|118138554|pdb|2IXL|A Chain A, Rmlc S. Suis With Dtdp-Rhamnose
gi|118138555|pdb|2IXL|B Chain B, Rmlc S. Suis With Dtdp-Rhamnose
gi|118138556|pdb|2IXL|C Chain C, Rmlc S. Suis With Dtdp-Rhamnose
gi|118138557|pdb|2IXL|D Chain D, Rmlc S. Suis With Dtdp-Rhamnose
gi|23504818|emb|CAD49091.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis]
gi|145689760|gb|ABP90266.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis 05ZYH33]
gi|145691968|gb|ABP92473.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis 98HAH33]
gi|251816312|emb|CAZ51941.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
suis SC84]
gi|251817740|emb|CAZ55491.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
suis BM407]
gi|251820094|emb|CAR46373.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
suis P1/7]
gi|292558607|gb|ADE31608.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis GZ1]
gi|319758390|gb|ADV70332.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus suis JS14]
Length = 197
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASK--SIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N PFL
Sbjct: 131 VLSDFVAYSYLVNDYWALELKPKYAF-VNYADPSLDIKW--ENLEEAEVSEADENHPFLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|312864883|ref|ZP_07725114.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus downei
F0415]
gi|311100010|gb|EFQ58223.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus downei
F0415]
Length = 197
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAGGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADEGKVLGSWVDLREGESFGHTYQTIIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDKVSYSYLVNDYWALELKPKYAF-VNYADPALGIEW--ENLAEAEVSEADKNHPMLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|322385642|ref|ZP_08059286.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus cristatus ATCC
51100]
gi|321270380|gb|EFX53296.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus cristatus ATCC
51100]
Length = 203
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ ++ I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVIAAS---KGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|327463279|gb|EGF09600.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis SK1]
Length = 203
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L N Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDNVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|68642431|emb|CAI32846.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 198
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D+N L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKNHSLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|330991366|ref|ZP_08315317.1| dTDP-4-dehydrorhamnose 3-5-epimerase [Gluconacetobacter sp. SXCC-1]
gi|329761385|gb|EGG77878.1| dTDP-4-dehydrorhamnose 3-5-epimerase [Gluconacetobacter sp. SXCC-1]
Length = 204
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 9/185 (4%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSK--LLKELGL--QDVFVQDNHSFSFDCGTIRGL 56
+ I + +L RG T + +L G+ + F++ + + +D +RGL
Sbjct: 24 LPIEGLLLLVPTIRT-GRGS---TCRAACTVLSHAGIAMTEYFMRSSRTERYDRHVVRGL 79
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
+ Q PP+AQ +L++C G ++ + VD+R S ++G W + +SA N Q++IP GF HG
Sbjct: 80 YCQVPPHAQGRLLQCGRGAVWMVGVDVRTGSRSFGQWAGVTLSAENARQLWIPPGFLHGL 139
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
L+ NTEV + T + + W D+++ I WP+ D +S D + P + +
Sbjct: 140 CCLDGNTEVTCRQTRPDARASTRTIRWNDETLGIEWPVRD-QQAVLSPADGHAPSFSNVI 198
Query: 177 SPFEY 181
F Y
Sbjct: 199 DWFPY 203
>gi|225856102|ref|YP_002737613.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
P1031]
gi|1944621|emb|CAB05931.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae]
gi|68642281|emb|CAI32711.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|125857153|emb|CAI30306.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
gi|225724625|gb|ACO20477.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pneumoniae
P1031]
gi|301793615|emb|CBW35995.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae INV104]
gi|332204382|gb|EGJ18447.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Streptococcus
pneumoniae GA47901]
Length = 198
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKVLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENLEEADVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|25011321|ref|NP_735716.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus agalactiae
NEM316]
gi|77407798|ref|ZP_00784551.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae
COH1]
gi|24412859|emb|CAD46931.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus agalactiae
NEM316]
gi|77173545|gb|EAO76661.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae
COH1]
Length = 197
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG + F + + + +
Sbjct: 18 IPGLLEFDITVRGDNRGWFKENFQKEKMIPLGFPESFFEADKLQNNISFNKKNTLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K V R ++G I A+ I++P G A+GF L
Sbjct: 78 EPWDKYVSIADEGRVIGTWVDLREGDSFGNVYQTIIDASK--GIFVPRGVANGFQVLSDK 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y V D+++ ++ V + D ++ I W + VSE D+N P L +
Sbjct: 136 AAYTYLVNDYWALELKPKYAF-VNYADPNLGIQW--ENLEEAEVSEADKNHPLLKDVK 190
>gi|125718224|ref|YP_001035357.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus sanguinis
SK36]
gi|125498141|gb|ABN44807.1| DTDP-4-keto-6-deoxyglucose-3,5-epimerase, putative [Streptococcus
sanguinis SK36]
Length = 197
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|76798347|ref|ZP_00780591.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus agalactiae
18RS21]
gi|76586298|gb|EAO62812.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus agalactiae
18RS21]
Length = 197
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG + F + + + +
Sbjct: 18 IPGLLEFDITVRGDNRGWFKENFQKEKMIPLGFPESFFEADKLQNNISFNKKNTLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K V R ++G I A+ I++P G A+GF L
Sbjct: 78 EPWDKYVSIADEGRVIGTWVDLREGDSFGNVYQTIIDASK--GIFVPRGVANGFQVLSDK 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y V D+++ ++ V + D ++ I W + VSE D+N P L +
Sbjct: 136 AAYTYLVNDYWALELKPKYAF-VNYADPNLGIQW--ENLEEAEVSEADKNHPLLKDVK 190
>gi|262282423|ref|ZP_06060191.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus sp.
2_1_36FAA]
gi|262261714|gb|EEY80412.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus sp.
2_1_36FAA]
Length = 192
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|91069858|gb|ABE10789.1| dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase, putative [uncultured
Prochlorococcus marinus clone ASNC1363]
Length = 166
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 14/169 (8%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I+K +F D RG TY L+ F D S S IRG+H+
Sbjct: 9 KIQGVKIIKYDRFIDLRGSIWTTY----LENKIKNIKFNHDKFSVS-HKDVIRGIHYD-- 61
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
KLV + G I + VD+R++S TY + I N I IP +GF
Sbjct: 62 -NKTFKLVTAVYGAIDQVVVDMRKDSDTYKASMVFNIDDNKRFSILIPPMVGNGFRVKSD 120
Query: 122 NTEVIYKVT---DFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQ 167
YK++ + + + W D +I I W P +S +D
Sbjct: 121 IAVYHYKLSYLGKYLDADKQYTIKWDDPTIGINWKCEK---PILSNRDS 166
>gi|68643513|emb|CAI33749.1| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 198
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I+ + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 ISGMLEFDIPVHGDNRGWFKENFQKEKMVPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + + + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADNGKVLGTWVDLREGETFGNIYQTEI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D + I W + VSE D++ P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYSDPELGIEW--ENLEEAEVSEADKHHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|157150920|ref|YP_001450299.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus gordonii
str. Challis substr. CH1]
gi|157075714|gb|ABV10397.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus gordonii
str. Challis substr. CH1]
Length = 197
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFVEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|325687674|gb|EGD29695.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis SK72]
gi|327461219|gb|EGF07552.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK1057]
gi|332359734|gb|EGJ37551.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK355]
Length = 203
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|22537357|ref|NP_688208.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus agalactiae
2603V/R]
gi|76786998|ref|YP_329899.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus agalactiae
A909]
gi|77405406|ref|ZP_00782500.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae
H36B]
gi|22534229|gb|AAN00081.1|AE014246_16 dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae
2603V/R]
gi|76562055|gb|ABA44639.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus agalactiae
A909]
gi|77175988|gb|EAO78763.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae
H36B]
gi|319745224|gb|EFV97543.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae ATCC
13813]
Length = 197
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG + F + + + +
Sbjct: 18 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPESFFEADKLQNNISFNKKNTLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K V R ++G I A+ I++P G A+GF L
Sbjct: 78 EPWDKYVSIADEGRVIGTWVDLREGDSFGNVYQTIIDASK--GIFVPRGVANGFQVLSDK 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y V D+++ ++ V + D ++ I W + VSE D+N P L +
Sbjct: 136 AAYTYLVNDYWALELKPKYAF-VNYADPNLGIQW--ENLEEAEVSEADKNHPLLKDVK 190
>gi|28849788|gb|AAN64545.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus gordonii]
Length = 197
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|77412812|ref|ZP_00789017.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae 515]
gi|77161108|gb|EAO72214.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae 515]
Length = 197
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG + F + + + +
Sbjct: 18 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPESFFEADKLQNNISFNKKNTLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K V R ++G I A+ I++P G A+GF L
Sbjct: 78 EPWDKYVSIADEGRVIGTWVDLREGDSFGNVYQTIIDASK--GIFVPRGVANGFQVLSDK 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y V D+++ ++ V + D ++ I W + VSE D+N P L +
Sbjct: 136 AAYTYLVNDYWALELKPKYAF-VNYADPNLGIQW--ENLEEAEVSEADKNHPLLKDVK 190
>gi|159232422|emb|CAM96606.1| probable NDP-hexose epimerase [Streptomyces ambofaciens]
Length = 206
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
V + D RG F + L+ V V+ H +RGLH P
Sbjct: 9 PDVFRIDPEPLPDHRGRFYEAVRRGPLEAAVGHSVEVRQVHCTVSGRNVLRGLHATTLPP 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
QAK++ C+ G + VD+R SP +G + ++ A +G +Y+P G G++ L +T
Sbjct: 69 GQAKILTCVRGAALTMVVDMRVGSPGFGRYEAVRQDAPSGTALYLPDGIGLGYVALADDT 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
+ Y T+ Y V D + + W L P S +D
Sbjct: 129 CMNYLCTEEYVPGMVIDVDALDPELGLPWGLTGD--PVRSARD 169
>gi|227549713|ref|ZP_03979762.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078209|gb|EEI16172.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 440
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ + I D+RGWF + +S G + VQ+N SF+ G RG+H +
Sbjct: 6 IDGLEIHPLDVHADNRGWFKENWS-------GQRLRPVQNNISFNARVGATRGMHAE--- 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K V GR+F VD+R S T+ +EI + +++P G A+GF LE
Sbjct: 56 -PWDKWVSVATGRVFAAWVDLREGSETFATKFGVEIGPDT--AVFVPRGVANGFQALEDA 112
Query: 123 TEVIYKVTDFYSVE---HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
T Y V Y+ +I WPL T +SE DQ P L +
Sbjct: 113 TTYTYLVNARYNPNGAYAYCSYR------EIDWPLEPTE---LSEADQKHPPLADAPT 161
>gi|89994596|emb|CAI34065.2| dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC [Streptococcus
pneumoniae]
Length = 202
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 20/186 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + G + R T+G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPL---LDTILPSVSEKDQNLP 170
L Y V D+++ ++ V + D S+ I W + VSE D++ P
Sbjct: 131 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEWENIAEAEVSEAEVSEADKHHP 189
Query: 171 FLNQID 176
L +
Sbjct: 190 LLKDVK 195
>gi|327470793|gb|EGF16249.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK330]
Length = 203
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|332360987|gb|EGJ38791.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK1056]
Length = 203
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|324994660|gb|EGC26573.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK678]
gi|327474886|gb|EGF20291.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK408]
gi|327490012|gb|EGF21801.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK1058]
gi|328946485|gb|EGG40625.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK1087]
Length = 203
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDKVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|325690527|gb|EGD32530.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK115]
Length = 203
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGSWVDLREGDTFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|313890169|ref|ZP_07823804.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
pseudoporcinus SPIN 20026]
gi|313121530|gb|EFR44634.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
pseudoporcinus SPIN 20026]
Length = 198
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPESFFTAGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADQGKVLGTWVDLRQGDSFGHIYQTIIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VS+ D+N PFL
Sbjct: 131 VLSETVSYSYLVNDYWALDLKPKYAF-VNYADPSLGIQW--ENLEAAEVSDADKNHPFLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|323351360|ref|ZP_08087016.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
VMC66]
gi|322122584|gb|EFX94295.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
VMC66]
Length = 203
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFYAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|322372727|ref|ZP_08047263.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
sp. C150]
gi|321277769|gb|EFX54838.1| dTDP-4-keto-L-rhamnose reductase and
dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
sp. C150]
Length = 197
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGMIEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLSDKVAYSYLVNDYWALELKPKYAF-VYYADPSLDIKW--ENLKEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|332522280|ref|ZP_08398532.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
porcinus str. Jelinkova 176]
gi|332313544|gb|EGJ26529.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus
porcinus str. Jelinkova 176]
Length = 198
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPESFFTEGKLQNNVSFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADQGKVLGTWVDLRQGDSFGHVYQTIIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VS+ D+N P+L
Sbjct: 131 VLSETVSYSYLVNDYWALELKPKYAF-VNYADPSLGIQW--ENLEAAEVSDADKNHPYLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|116618517|ref|YP_818888.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116097364|gb|ABJ62515.1| dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 197
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG + F +++ + + +G+
Sbjct: 18 IPGMIAFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFKEDKLQNNVSLSRKGVLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K + + R ++G I A+ IY+P G A+GF L
Sbjct: 78 EPWDKYISVADNGRVLGSWVDLREGDSFGHVYQTVIDASK--GIYVPRGVANGFQVLSET 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
Y V D+++ ++ V + D ++ I W D VSE D+N P L +
Sbjct: 136 VSYSYLVNDYWALDLKPKYAF-VNYADPALGIEW--YDVENAEVSEADKNHPLLKDV 189
>gi|324994020|gb|EGC25939.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK405]
Length = 203
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFVEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDIVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|224223718|gb|ACN39733.1| SibJ [Streptosporangium sibiricum]
Length = 193
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 79/195 (40%), Gaps = 11/195 (5%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDC-GTIRGLHFQ 59
+ ++ L F D RG F Y L F + S + G RG+H+
Sbjct: 6 LAVDGALELTLPVFPDERGMFCPIYQDGALS-----VPFPIRRSALSVNRAGAARGIHYA 60
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
K+V C++G D VD+R SPT+G W ++ + A+ +Y+P G HGF+ L
Sbjct: 61 PGGDGPTKIVHCVSGSAIDFVVDVRVGSPTFGHWDTILLDADLPRAVYLPAGLGHGFVAL 120
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
T V Y +T Y + V+ D ++ + PL +S D+ P L +
Sbjct: 121 TGGTVVSYLMTTAYQAGDEQPVSLLDPALGL--PLPAAQELVMSPADRAAPTLAEALGR- 177
Query: 180 EYDGLPLLSLNMERD 194
LP +
Sbjct: 178 --GLLPPYRTGPAEE 190
>gi|5305795|gb|AAD41825.1|AF147704_5 NDP-hexose 3,5- (or5-) epimerase TylCVII [Streptomyces fradiae]
Length = 197
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ D RG ++ + L + G Q NH+ + T+RG+H P
Sbjct: 10 DAYRITPEPIPDHRGSLYESLRYETLRRATGHAIEIRQVNHTVN-RRNTLRGIHGTTVPP 68
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
Q K+V C+ G + VD+R SPT+G + A +G+ +Y+P G G++ L +T
Sbjct: 69 GQGKIVTCVRGAARTMVVDLRVGSPTFGGHDVVGQDAESGVAVYLPDGLGLGYVALADDT 128
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
+ Y T Y+ + D + + W L + P SE+D
Sbjct: 129 CMNYLYTREYTPGMIIDIDALDPGLGLPWNLTEP--PVRSERD 169
>gi|325695966|gb|EGD37857.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK160]
gi|332367029|gb|EGJ44769.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK1059]
Length = 203
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFSESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|324991645|gb|EGC23578.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK353]
Length = 203
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMMEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|325694720|gb|EGD36626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis
SK150]
Length = 203
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I+ + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 ISGMLEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|46204586|ref|ZP_00049777.2| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Magnetospirillum magnetotacticum MS-1]
Length = 131
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 74/126 (58%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + + +++ D RG+F++T+ + GL F Q + SF+ GT+RG+HF R
Sbjct: 6 LALPGLFLVRPEPHADERGFFARTHCEEEFAGHGLIGRFAQSSVSFNHRRGTVRGMHFSR 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
P+A+ KLVRC +G I D VD+R SPTY + +SA N +YIP G AHGF TL
Sbjct: 66 EPHAETKLVRCTSGAIHDAVVDLRPGSPTYLRTEQVTLSARNRHALYIPAGLAHGFQTLM 125
Query: 121 MNTEVI 126
TE++
Sbjct: 126 DETEIL 131
>gi|332362097|gb|EGJ39899.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis SK49]
Length = 203
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 24 IPGMMEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLH 82
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 83 AEPWDKY---ISVADDGKVLGSWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 136
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D ++ I W + VSE D+N P L
Sbjct: 137 VLSDTVSYSYLVNDYWALELKPKYAF-VNYADPALGIQW--ENLEAAEVSEADKNHPLLK 193
Query: 174 QID 176
+
Sbjct: 194 DVK 196
>gi|322389834|ref|ZP_08063375.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
ATCC 903]
gi|321143415|gb|EFX38852.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
ATCC 903]
Length = 197
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLMEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNISFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGETFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLTDKVAYTYLVNDYWALELKPKYAF-VNYADPSLDIQW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|296876234|ref|ZP_06900287.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
ATCC 15912]
gi|296432739|gb|EFH18533.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
ATCC 15912]
Length = 197
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLMEFDIPVRGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNISFS-RKNVLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ + G++ VD+R + ++ + I++P G A+GF
Sbjct: 77 AEPWDKY---ISVADEGKVLGTWVDLREGDSFGNTYQTVI---DASKGIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+DI W + VSE D+N P L
Sbjct: 131 VLTDKVAYTYLVNDYWALELKPKYAF-VNYADPSLDIQW--ENLEEAEVSEADKNHPLLK 187
Query: 174 QID 176
+
Sbjct: 188 DVK 190
>gi|221231237|ref|YP_002510389.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC [Streptococcus
pneumoniae ATCC 700669]
gi|2804722|gb|AAC38705.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|2804728|gb|AAC38710.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|3320400|gb|AAC38758.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus pneumoniae]
gi|220673697|emb|CAR68190.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC [Streptococcus
pneumoniae ATCC 700669]
Length = 197
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 7 RILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLHFQRP 61
D+RGWF + + + + LG + F Q+N SFS +RGLH +
Sbjct: 22 LEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFS-RKNVLRGLHAE-- 78
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K + G + R T+G I A+ I++P G A+GF L
Sbjct: 79 --PWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASK--GIFVPRGVANGFQVLSD 134
Query: 122 NTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y V D+++ ++ V + D S+ I W + VSE D+N P L +
Sbjct: 135 TVSYSYLVNDYWALELKPKYAF-VNYADPSLGIEW--ENIAEAEVSEADKNHPLLKDVK 190
>gi|305679681|ref|ZP_07402491.1| putative dTDP-4-dehydrorhamnose reductase [Corynebacterium
matruchotii ATCC 14266]
gi|305660301|gb|EFM49798.1| putative dTDP-4-dehydrorhamnose reductase [Corynebacterium
matruchotii ATCC 14266]
Length = 482
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 15 EDSRGWFSQTYSSKLLKE------LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKL 68
D+RGWF + + + + + VQ+N SF+ G RGLH + K
Sbjct: 3 PDNRGWFKENWQREKIAAIPELSQACREFRPVQNNISFNAQPGVTRGLHAE----PWNKF 58
Query: 69 VRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128
V G +F + D+R +SPT+G S I+ +++P G A+GF LE + Y
Sbjct: 59 VTIAQGEVFGVWCDLRADSPTFGKVFSTRIT--TEQAVFVPRGVANGFQALEP-SIYTYL 115
Query: 129 VTDFYSVEHDSG-VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V +S + V D ++ I WP+ +S D+ P L
Sbjct: 116 VDAHWSPQAHYSHVNLADPALGICWPIP-LDKAEISAADRTHPLLADA 162
>gi|77411729|ref|ZP_00788067.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae
CJB111]
gi|77162237|gb|EAO73210.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus agalactiae
CJB111]
Length = 197
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I + D+RGWF + + + + LG + F + + + +
Sbjct: 18 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPESFFEADKLQNNISFNKKNTLRGLHA 77
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
K V R ++G I A+ I++P G A+GF L
Sbjct: 78 EPWDKYVSIADEGRVIGTWVDLREGDSFGNVYQTIIDASK--GIFVPRGVANGFQVLSDK 135
Query: 123 TEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
Y V D+++ ++ V + D ++ I W + VSE D+N P L +
Sbjct: 136 AAYTYLVNDYWALELKPKYAF-VNYADSNLGIQW--ENLEEAEVSEADKNHPLLKDVK 190
>gi|153951869|ref|YP_001397849.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939315|gb|ABS44056.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 180
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I+ FED RG + K L + + + +RG+H
Sbjct: 13 LSGVYIITPNFFEDFRGEIWSVFEDKAFVNLLPKGLNFVLDKFTLSKPNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EM 121
+ KLV C++G I + VD R+ SPTY + S IS+ I IP F + L +
Sbjct: 70 HKSWKLVTCVSGEIQQVVVDCRKESPTYLKYESFNISSKQKKLILIPPFFGNAHYVLGDK 129
Query: 122 NTEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
YK ++ E AW D+ I I W P +SE+D
Sbjct: 130 EALYYYKWAYEGEYVDAEDQFTYAWNDERIGIKW---QGENPILSERDLK 176
>gi|57505644|ref|ZP_00371571.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter upsaliensis
RM3195]
gi|57016191|gb|EAL52978.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter upsaliensis
RM3195]
Length = 180
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I+ FED RG + K L + + + +RG+H
Sbjct: 13 LSGVYIITPNFFEDFRGEIWSVFEDKAFVNLLPKGLNFVLDKFTLSKSNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EM 121
+ KLV C++G I + VD R+ SPTY + S IS+ I IP F + L +
Sbjct: 70 HKSWKLVTCVSGEIQQVVVDCRKESPTYLKYESFNISSKQKKLILIPPFFGNAHYVLGDK 129
Query: 122 NTEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
YK ++ E AW D+ I I W P +SE+D
Sbjct: 130 EALYYYKWAYEGEYVDAEDQFTYAWNDERIGIKW---QGENPILSERDLK 176
>gi|297162849|gb|ADI12561.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces bingchenggensis
BCW-1]
Length = 147
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 41 QDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISA 100
Q N S S G IRG+HF P QAK + C +G + D+ VD+R SPT+G W ++++
Sbjct: 5 QANLSTSRR-GAIRGIHFADVPPGQAKYITCASGAVRDVVVDLRVGSPTFGRWETVDLDD 63
Query: 101 NNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP 160
+ +++ G H L ++Y + Y E + + D + I W + + P
Sbjct: 64 QSRQALFLTEGIGHAVQGLTEEATIVYMCSAGYVAERERAIHPLDPDLGIDW--IPGVEP 121
Query: 161 SVSEKDQNLPFLNQI 175
+S KD P + +
Sbjct: 122 ILSAKDTVAPTVAEA 136
>gi|304388865|ref|ZP_07370916.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis ATCC
13091]
gi|304337182|gb|EFM03365.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis ATCC
13091]
Length = 123
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ Q KLVR + G +FD+AVD+R SPT+G W +SA N Q++IP GFAHGF L
Sbjct: 1 QTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLSAQNQCQLWIPEGFAHGFCVL 60
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
EV+YK TD+Y E + + W D ++ I WPL P +S KD Q +
Sbjct: 61 GDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPL--QTAPLLSPKDLAGKTWAQAEK 116
>gi|300728519|ref|ZP_07061878.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
gi|299774237|gb|EFI70870.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
Length = 122
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
+VRC+ G + D+AVDIR+ SPTYG V++E++ +N Q ++P GFAHGF L Y
Sbjct: 1 MVRCVKGAVLDVAVDIRKGSPTYGQHVAVELTEDNHRQFFVPRGFAHGFAVLSETAVFQY 60
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYDGLPLL 187
K +FY E D G++ D S+ I W + D +SEKD L DSPF+ + + L
Sbjct: 61 KCDNFYHPEADGGISIVDDSLGIDWKI-DAEKALLSEKDTKHVLLEDFDSPFDIN-VDLY 118
Query: 188 SL 189
Sbjct: 119 PE 120
>gi|322381305|ref|ZP_08055308.1| hypothetical protein PL1_0219 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154881|gb|EFX47152.1| hypothetical protein PL1_0219 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 119
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 3/120 (2%)
Query: 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHG 115
+H+Q PPY +AKLV+CI G ++D+ +D+R S TY ++ ++ N+G +YIP GFAHG
Sbjct: 1 MHYQHPPYGEAKLVQCIRGELYDVIIDLRPLSKTYRQTFAVHLAGNSGTMLYIPEGFAHG 60
Query: 116 FMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
F TL+ TEV+Y ++ Y E +G+ W D S I WPL +SE+D++ P +
Sbjct: 61 FQTLQDETEVLYYMSSPYKPEAAAGIRWNDPSFSIVWPLDVK---IISERDRHYPDYREF 117
>gi|225868323|ref|YP_002744271.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus equi subsp.
zooepidemicus]
gi|225701599|emb|CAW98850.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
equi subsp. zooepidemicus]
Length = 199
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 19 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPEQFFAAGKLQNNISFSRKH-VLRGLH 77
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + A R ++G I A+ I++P G A+GF
Sbjct: 78 AE----PWDKYISVADEGKVLGAWVDLREGDSFGHTYQTVIDASK--GIFVPRGVANGFQ 131
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLN 173
L Y V D+++ ++ V + D S+ I W + VSE D++ PFL
Sbjct: 132 VLTDKVAYTYLVNDYWALELKPKYAF-VNYADPSLGIAW--ENLEQAEVSEADKSHPFLE 188
Query: 174 QID 176
+
Sbjct: 189 AVK 191
>gi|34762800|ref|ZP_00143787.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27887551|gb|EAA24634.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 131
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHG 115
+HFQ+ Y+QAKL+ + G I DI +D+R+NS T+G + S+E++ N ++IP FAHG
Sbjct: 1 MHFQKREYSQAKLISILRGSILDIVIDLRKNSETFGKYFSIELNEKNKKVLFIPKNFAHG 60
Query: 116 FMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPF 171
F+TLE NTE+ YK +FY+ + ++G+ W D ++I W L + +SEKD+
Sbjct: 61 FLTLEDNTEIFYKCDNFYNPQSEAGIIWNDSDLNIEWNLKKYKINESELIISEKDKKNMS 120
Query: 172 LNQIDS 177
+
Sbjct: 121 FKEYKK 126
>gi|153875696|ref|ZP_02003381.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Beggiatoa sp. PS]
gi|152067839|gb|EDN66618.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Beggiatoa sp. PS]
Length = 200
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-----GLQDVFVQDNHSFSFDCGTIRG 55
+ I ++++K +F D RG+F++ + FVQ N SFS +RG
Sbjct: 9 LTIPDIKVIKFARFCDHRGYFTEPFRKSDFANHPEMSFMKGVEFVQANESFS-KSKVVRG 67
Query: 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCW----VSLEISANNGLQIYIPTG 111
LHFQ PY KLVR I GR+ DI +DIR+NSPT G + + A+ I++P G
Sbjct: 68 LHFQWNPY-MGKLVRTIKGRMVDIVLDIRKNSPTQGKIIAYDMPNQAEAHFSEWIWVPPG 126
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159
FAHG + + Y + YS ++G++ + W L D L
Sbjct: 127 FAHGNF-FTEESMIEYFCSGEYSPGCEAGISPIAPDL--DWSLCDQAL 171
>gi|256846110|ref|ZP_05551568.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_36A2]
gi|294784762|ref|ZP_06750050.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_27]
gi|256719669|gb|EEU33224.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_36A2]
gi|294486476|gb|EFG33838.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_27]
Length = 131
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHG 115
+HFQ+ Y+QAKL+ + G I DI VD+R++S T+G + S+E++ N ++IP FAHG
Sbjct: 1 MHFQKREYSQAKLISILRGSILDIVVDLRKDSETFGKYFSIELNEKNKKVLFIPKNFAHG 60
Query: 116 FMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPF 171
F+TLE NTE+ YK +FY+ + ++G+ W D ++I W L + +SEKD+
Sbjct: 61 FLTLEDNTEIFYKCDNFYNPQSEAGIIWDDSDLNIEWNLKKYKINKGKLIISEKDKKNMS 120
Query: 172 LNQIDS 177
+
Sbjct: 121 FKEYKK 126
>gi|237742784|ref|ZP_04573265.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 4_1_13]
gi|229430432|gb|EEO40644.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 4_1_13]
Length = 131
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHG 115
+HFQ+ Y+QAKL+ + G I DI VD+R+NS T+G + S+E++ N ++IP FAHG
Sbjct: 1 MHFQKGEYSQAKLISILRGSILDIVVDLRKNSETFGKYFSIELNEKNKKVLFIPKNFAHG 60
Query: 116 FMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPF 171
F+TLE NTE+ YK +FY+ + ++G+ W D ++I W L + +SEKD+
Sbjct: 61 FLTLEDNTEIFYKCDNFYNPQSEAGIIWDDSDLNIEWNLKKYKINESELIISEKDKKNTS 120
Query: 172 LNQIDS 177
+
Sbjct: 121 FKEYKK 126
>gi|225870742|ref|YP_002746689.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus equi subsp.
equi 4047]
gi|225700146|emb|CAW94280.1| putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Streptococcus
equi subsp. equi 4047]
Length = 199
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 17/182 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 19 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPEQFFAAGKLQNNISFSRKH-VLRGLH 77
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + A R ++G I A+ I++P G A+GF
Sbjct: 78 AE----PWDKYISVADEGKVLGAWVDLREGDSFGHTYQTVIDASK--GIFVPRGVANGFQ 131
Query: 118 TLEMNTEVIYKVTDFYS---VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
L Y V D+++ + + V + D S+ I W VSE D++ PFL
Sbjct: 132 VLTDKVAYTYLVNDYWALELKQKYAFVNYADPSLGIAW--ESLEQAEVSEADKSHPFLEA 189
Query: 175 ID 176
+
Sbjct: 190 VK 191
>gi|148927818|ref|ZP_01811243.1| dTDP-4-dehydrorhamnose 3,5-epimerase [candidate division TM7
genomosp. GTL1]
gi|147886844|gb|EDK72389.1| dTDP-4-dehydrorhamnose 3,5-epimerase [candidate division TM7
genomosp. GTL1]
Length = 121
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
+ AQ KLVR + G +FD+AVD+R++SPT+G WV +SA+N Q+++P GF HGF+ L
Sbjct: 4 QIQQAQGKLVRVVQGEVFDVAVDLRKSSPTFGKWVGALLSADNKHQLWVPEGFGHGFVVL 63
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
+ E +YK TD+Y+ H+ +AW D ++ I W P VS KD
Sbjct: 64 SDSAEFLYKTTDYYAPVHERCIAWNDPTLAIDWRTSGE--PIVSAKDALGKPF 114
>gi|237756976|ref|ZP_04585437.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690866|gb|EEP60013.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 108
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V+I+K + F+D+RG+F + Y ++ GL FVQDNHS S G +RGLHFQ
Sbjct: 9 EIPEVKIIKPKVFKDARGFFLEFYKKSDFEKAGLNVEFVQDNHSKS-VKGVLRGLHFQEK 67
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISA 100
PY Q KLVRCI G+IFD+AVDIR +SP + WV++E+S
Sbjct: 68 PYEQGKLVRCIKGKIFDVAVDIRPDSPYFKKWVAVELSE 106
>gi|291539460|emb|CBL12571.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Roseburia
intestinalis XB6B4]
Length = 181
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 8 ILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAK 67
+ FED RG+ S Y + Q N +S + T+RGLHFQ +AQAK
Sbjct: 17 VFIPPAFEDFRGYLSVPYDRDV------PFQVCQINQGYSREAFTLRGLHFQMGEHAQAK 70
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
+V C+ G IF++AVD+R +G S +S N +YIP GFAHG++TLE +T + +
Sbjct: 71 MVSCLHGSIFNVAVDLRPGK-CFGYSYSEVLSFENRKMMYIPKGFAHGYLTLEDDTLMQW 129
Query: 128 KVTDFYSVEHDSGVAWQDKSI---DITWPLLDTILPSVSEKDQNLPFLNQI 175
V + E V + D + WP +SEKD+N +L ++
Sbjct: 130 CVDQDFCGETAQAVRYDDPDLVWKGEAWP---KGEYIISEKDKNAMWLGEL 177
>gi|580881|emb|CAA51629.1| ipa-73d [Bacillus subtilis subsp. subtilis str. 168]
Length = 432
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V++ K K D RG+F++ L + F Q + S S G I+ H+
Sbjct: 283 IDGVKVKKLMKHSDDRGFFAELVRDDE----NLLEHFGQASWSKS-YPGVIKAFHYH--- 334
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R +S T G + +N + + IP G AHG+ L
Sbjct: 335 EKQDDLWFFPTGHAQVVLYDLREDSKTKGETDVYYMGEDNPMLLLIPKGVAHGYRVLGET 394
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D++I W
Sbjct: 395 PLTIIYFTTMSYNPDQPDEKRIPWDDETIGFNW 427
>gi|16082676|gb|AAL14254.1| NDP-4-keto-6-deoxyhexose 5-epimerase [Streptomyces venezuelae ATCC
10712]
Length = 197
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK-ELGLQ-DVFVQDNHSFSFDCGTIRGLHF 58
+ I F+DSRG F+ Y + +LG Q +H+ S GT+RG+HF
Sbjct: 6 LAIEGAFAFTPPVFKDSRGLFASPYQGDVFAGQLGRPLFQVNQVSHNLSAR-GTLRGVHF 64
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
P AK V C GR+ D +D+R SPT+G WV E+ A +Y+P G H F++
Sbjct: 65 TATPPGMAKYVYCPYGRLRDFLIDLRVGSPTFGQWVMNELDAETSRALYVPVGVGHAFVS 124
Query: 119 LEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL---------------DTILPSVS 163
L+ ++ +Y ++ YS + WP D + P
Sbjct: 125 LQDDSMCVYVMSQGYSP----------PT---NWPCTRSTRRSDLPAGRRRADPVRP--- 168
Query: 164 EKDQNLPFLNQI 175
D+ P L +
Sbjct: 169 --DKIAPTLAEA 178
>gi|300779957|ref|ZP_07089813.1| probable dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
genitalium ATCC 33030]
gi|300534067|gb|EFK55126.1| probable dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and
dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium
genitalium ATCC 33030]
Length = 449
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 20/174 (11%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-QDNHSFSFDCGTIRGLHFQRP 61
I + + D+RGWF + + G + V Q+N SF+ G RG+H +
Sbjct: 12 IEGLEVRTLTVHGDNRGWFKENW-------AGDPAMRVEQNNVSFNAQRGATRGMHAE-- 62
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K V GR++ VD+R SPT+G EI + +++P G A+GF LE
Sbjct: 63 --PWDKYVSVATGRVYGAWVDLREGSPTFGAKYGCEIGPDT--AVFVPRGIANGFQALED 118
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
T IY +S +S WPL T VS KD P L
Sbjct: 119 ATTYIYLCNARWSPHAQYAFCSYRES---EWPLEPTE---VSAKDLEHPMLADA 166
>gi|121600544|ref|YP_992265.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei SAVP1]
gi|121229354|gb|ABM51872.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Burkholderia mallei SAVP1]
Length = 125
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 52 TIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTG 111
+RGLH+Q +AQ KLVR + G +FD+AVD+RR+SP +G WV + +SA N Q+++P G
Sbjct: 1 MLRGLHYQI-QHAQGKLVRVVDGEVFDVAVDVRRSSPNFGKWVGVRLSAENKRQLWVPAG 59
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
FAHGF+ L + + +YK TD++ E + + W DK I I WP+ P V+ KD
Sbjct: 60 FAHGFVVLSESADFLYKTTDYWYPEFERSILWSDKQIGIEWPI--DREPLVAAKDAAGKA 117
Query: 172 LNQID 176
+++ +
Sbjct: 118 ISEAE 122
>gi|291534898|emb|CBL08010.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Roseburia
intestinalis M50/1]
Length = 175
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 8 ILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAK 67
+ FED RG+ S Y + Q N +S + T+RGLHFQ +AQAK
Sbjct: 11 VFIPPAFEDFRGYLSVPYDRDV------PFQVCQINQGYSREAFTLRGLHFQMGEHAQAK 64
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
+V C+ G IF++AVD+R +G S +S N +YIP GFAHG++TLE +T + +
Sbjct: 65 MVSCLHGSIFNVAVDLRPGK-CFGYSYSEVLSFENRKMMYIPKGFAHGYLTLEDDTLMQW 123
Query: 128 KVTDFYSVEHDSGVAWQDKSI---DITWPLLDTILPSVSEKDQNLPFLNQI 175
V + E V + D + WP +SEKD+N +L ++
Sbjct: 124 CVDQDFCGETAQAVRYDDPDLVWKGEAWP---KGEYIISEKDKNAMWLGEL 171
>gi|303288449|ref|XP_003063513.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455345|gb|EEH52649.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 549
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 5/167 (2%)
Query: 15 EDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAG 74
D RG+ Y E + S S RG+ +++LV + G
Sbjct: 25 RDHRGYTQDLYRDDSYPEHVQPPEPGHRHVSLSHSH---RGVLRGLLVTYRSRLVSVVKG 81
Query: 75 RIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134
I+D+ VD R S TY W +S+ N Q+++P G AHGF+ LE +V+ +
Sbjct: 82 AIYDVIVDCRPESRTYRRWCVAIVSSANRRQVFVPGGCAHGFLVLED-ADVLVHSSTRED 140
Query: 135 VEHDSGVAWQDKSIDITWP-LLDTILPSVSEKDQNLPFLNQIDSPFE 180
E++ + +D ++ + WP L D S++D P L Q F
Sbjct: 141 PENELTINARDPALGVYWPRLDDVREAITSDEDGAAPPLLQAHDRFV 187
>gi|116625282|ref|YP_827438.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Candidatus Solibacter
usitatus Ellin6076]
gi|116228444|gb|ABJ87153.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Candidatus Solibacter
usitatus Ellin6076]
Length = 173
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Query: 3 INPVRILKT-RKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V++ + F D RG+F + + Q + + ++ GT++ HF
Sbjct: 22 ISGVKV-EPYALFPDDRGYFLEVHRMGRGLAAAFPPATTQMSAALNYP-GTVKAFHFHLH 79
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-E 120
+ + G + VD+R S TYG +L + A QI IP G HG+ +
Sbjct: 80 QHDC---WAPVYGLLQVALVDLRLGSATYGARNTLYVGALRPWQILIPPGVGHGYKVIGN 136
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITW 152
++Y FY+ + + V + D I+ W
Sbjct: 137 KEAMLVYLTDQFYNPKDEGRVPYNDPGINYDW 168
>gi|302870779|ref|YP_003839415.1| dTDP-4-dehydrorhamnose 35-epimerase related [Caldicellulosiruptor
obsidiansis OB47]
gi|302573638|gb|ADL41429.1| dTDP-4-dehydrorhamnose 35-epimerase related [Caldicellulosiruptor
obsidiansis OB47]
Length = 153
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++ + KF D RG+F + + GL + F Q + S + G I+ H+ +
Sbjct: 4 IEGVKVKRLEKFADDRGFFMEILRDED----GLLEKFGQASMSLT-YPGVIKAFHYHKL- 57
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + G + D+R +SPTY + +N + + IP AHG+ L
Sbjct: 58 --QDDVWFFPKGNAQVVLYDLRPDSPTYKKTNVFYMGEHNPIVLLIPKMVAHGYRVLGNE 115
Query: 123 -TEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
++Y T+ Y+ E + + W DK I+ W
Sbjct: 116 PAIIVYFTTEHYNRENPDEYRIPWDDKEINFDW 148
>gi|289766572|ref|ZP_06525950.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D11]
gi|289718127|gb|EFD82139.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D11]
Length = 119
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
++ + G I DI VD+R NS T+G ++++E+++ N ++IP G AHGF+TLE NTE+ Y
Sbjct: 1 MINILKGSILDIVVDLRENSETFGKYLAIELNSKNKKVLFIPKGVAHGFLTLEDNTEIFY 60
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
K +FY+ + + G+ W DK ++I+W + +SEKD+ +
Sbjct: 61 KCDNFYNPQSEIGIIWNDKDLNISWNFKKYGINENELIISEKDKKNMSFKEYKK 114
>gi|222528108|ref|YP_002571990.1| dTDP-4-dehydrorhamnose 35-epimerase-like protein
[Caldicellulosiruptor bescii DSM 6725]
gi|222454955|gb|ACM59217.1| dTDP-4-dehydrorhamnose 35-epimerase related [Caldicellulosiruptor
bescii DSM 6725]
Length = 153
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++ + KF D RG+F + + G + F Q + S + G I+ H+ +
Sbjct: 4 IEGVKVKRLEKFADDRGFFMEILRDED----GFLEKFGQASMSLT-YPGVIKAFHYHKL- 57
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + G + D+R +SPTY + +N + + IP AHG+ L
Sbjct: 58 --QDDVWFFPKGNAQVVLYDLRPDSPTYKKTNVFYMGEHNPIVLLIPRMVAHGYRVLGNE 115
Query: 123 -TEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
++Y T+ Y+ E + + W DK I+ W
Sbjct: 116 PAIIVYFTTEHYNRENPDEYRIPWDDKEINFDW 148
>gi|257413304|ref|ZP_04742626.2| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseburia intestinalis L1-82]
gi|257204066|gb|EEV02351.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Roseburia intestinalis L1-82]
Length = 181
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 8 ILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAK 67
+ FED RG+ S Y + Q N +S + T+RGLHFQ +AQAK
Sbjct: 17 VFIPPAFEDFRGYLSVPYDRDV------PFQVCQINQGYSREAFTLRGLHFQMGEHAQAK 70
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIY 127
+V C+ G IF++AVD+R +G S +S N +YIP GFAHG++TLE +T + +
Sbjct: 71 MVSCLHGSIFNVAVDLRPGK-CFGYSYSEVLSFENRKMMYIPKGFAHGYLTLEDDTLMQW 129
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
V + E V + D + +SEKD+N +L ++
Sbjct: 130 CVDQDFCGETAQAVRYDDPDLVWKGEAWTKGEYIISEKDKNAMWLGEL 177
>gi|310778611|ref|YP_003966944.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Ilyobacter
polytropus DSM 2926]
gi|309747934|gb|ADO82596.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Ilyobacter
polytropus DSM 2926]
Length = 182
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
++++K F+D RG + ++YS + L LG+ F++DN+ S RGLH+Q
Sbjct: 12 KDLKLIKMTSFKDMRGEYIKSYSYRDLSSLGIDTKFLEDNYLISKKGSI-RGLHYQ-RDN 69
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
+AKL+RC+ G I DI VD+R++S TY + +S + L IP GFAHGF++L +T
Sbjct: 70 PEAKLIRCLEGSIMDIVVDLRKDSDTYKKVFKIRLSRGDDLLFSIPDGFAHGFISLTDST 129
Query: 124 EVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL--PSVSEKDQNLPFLNQI 175
V+YK +++Y + GV+ I + L + + V+EKD++ + I
Sbjct: 130 -VLYKSSNYYYPKDQYGVSIFSSEIGLDKILEEENIENVIVTEKDKSHAKIRDI 182
>gi|291617821|ref|YP_003520563.1| Hypothetical Protein PANA_2268 [Pantoea ananatis LMG 20103]
gi|291152851|gb|ADD77435.1| Hypothetical Protein PANA_2268 [Pantoea ananatis LMG 20103]
Length = 170
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 7/155 (4%)
Query: 25 YSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY--AQAKLVRCIAGRIFDIAVD 82
+S K LK + ++ ++ +++ + + C + +
Sbjct: 18 FSWKRLKNVAIRSYLKPTSNLCKTTIRAQADMYYAAYIFRKQSPRASWCASCGAKYSMLQ 77
Query: 83 IRRNSPTYGCWVSLEIS--ANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSG 140
Q++IP G AHGF+ L + YK T +Y+ + ++
Sbjct: 78 STSVPVLRPLVSGRVFCFLKKIKTQLWIPPGLAHGFVVLSDVADFEYKCTQYYNPKDEAC 137
Query: 141 VAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ W D + I WP+ P +S KDQ L ++
Sbjct: 138 LMWNDPDVAIQWPVE---QPILSVKDQQGLSLQEL 169
>gi|328471513|gb|EGF42401.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus MTCC
5462]
Length = 181
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDV--FVQDNHSFSFDCGTIRGLHFQ 59
I+ ++I+ + D RG + + ++ + + Q N + + RGLH +
Sbjct: 14 EIDGLKIIHVKMVTDERGTVRELFRQSQHSQVLVNPNMAWKQVNLTRTKRGAV-RGLHGE 72
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
A +KLV G F VD RR+SPT G V++ ++ Q+++P G +GF +
Sbjct: 73 ----AMSKLVTVAHGEAFGAYVDTRRDSPTLGSVVTVRLTPGV--QVFVPQGVCNGFQAV 126
Query: 120 EMNTEVIYKVTDFYSVEHDS-GVAWQDKSIDITWP--LLDTILPSVSEK 165
+TE +Y + + + D + I WP + L +S+K
Sbjct: 127 ADDTEYLYFFDNEWQKGMTGVALTPLDPDLGIEWPIAIKPDNLAQISKK 175
>gi|315639156|ref|ZP_07894322.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter upsaliensis
JV21]
gi|315480793|gb|EFU71431.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter upsaliensis
JV21]
Length = 180
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
++ V I+ FED RG + K L + + + +RG+H
Sbjct: 13 LSGVYIIMPNFFEDFRGEIWSVFEDKAFVNLLPKGLNFVLDKFTLSKPNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EM 121
+ KLV C++G I + VD R+ SPTY + S IS+ I IP F + L +
Sbjct: 70 HKSWKLVTCVSGEIQQVVVDCRKESPTYLKYESFNISSKQKKLILIPPFFGNAHYVLGDK 129
Query: 122 NTEVIYKV---TDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
YK ++ + A+ D+ I I W P +SE+D
Sbjct: 130 EALYYYKWAYEGEYMDADAQFTYAYNDERIGIKW---QGEKPILSERDLK 176
>gi|89098350|ref|ZP_01171234.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911]
gi|89086899|gb|EAR66016.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911]
Length = 152
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 11/155 (7%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M I V K K D RG+F++ L F Q + S S G I+ H+
Sbjct: 1 MQIEGVITKKLIKHCDDRGFFAEVVRDDE----NLLSHFGQLSWSTS-YPGVIKAFHYH- 54
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q L +G + D+R NS ++G + NN + + IP G AHG+ L
Sbjct: 55 --EEQDDLWFFPSGNAQVVLYDLRENSRSFGETNVYYMGENNPMILLIPKGVAHGYRVLG 112
Query: 121 MN-TEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
N V+Y T Y+ + + W D SI W
Sbjct: 113 KNPATVVYCTTKSYNPAAPDEKRIPWDDPSIGFDW 147
>gi|254520585|ref|ZP_05132641.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. 7_2_43FAA]
gi|226914334|gb|EEH99535.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium sp. 7_2_43FAA]
Length = 181
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 1 MNINPVRILKTRKF----EDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGL 56
+++ ++ D + ++ GL F ++ ++ G +RG+
Sbjct: 7 LDVEGCYLITPTVSMESTCD----LIKIFNDTQFNIYGLSTEFKEEYYAI-AKPGVVRGM 61
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
HFQ PP KL+ CI G I D+ VD+R+ S TYG + +E++ +N IY+P G AHG+
Sbjct: 62 HFQLPPEEHDKLITCIIGEIQDVVVDLRKESKTYGKYTMVELNESNKNLIYVPRGCAHGY 121
Query: 117 MTL-EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ + + YKVT + E G+ W S++I W + + SE D+ P
Sbjct: 122 YIKGKKDALIYYKVTKPFIRELRGGIHWD--SLNIPWDFSNEVEVE-SE-DKVWPKFEGF 177
Query: 176 DSPF 179
+SPF
Sbjct: 178 NSPF 181
>gi|85717222|ref|ZP_01048178.1| strX protein [Nitrobacter sp. Nb-311A]
gi|85695936|gb|EAQ33838.1| strX protein [Nitrobacter sp. Nb-311A]
Length = 128
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Query: 56 LHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHG 115
+H+Q PP A+ K+VRCI+G ++DI VD+R +SPT+ W +E+S N L +++P GFAHG
Sbjct: 1 MHYQLPPAAEIKIVRCISGALYDIIVDLRPDSPTFSRWFGIELSEENRLMLFVPRGFAHG 60
Query: 116 FMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
FMTL NTE Y V+ FY + G+ + D + WP +S+KD+ P +
Sbjct: 61 FMTLADNTEAFYLVSAFYEPAQERGLRFDDPHFALKWPRTPVD---ISDKDRAWPSFDAA 117
>gi|311070291|ref|YP_003975214.1| nucleotide sugar epimerase [Bacillus atrophaeus 1942]
gi|310870808|gb|ADP34283.1| nucleotide sugar epimerase [Bacillus atrophaeus 1942]
Length = 151
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++ K K D RG+F++ L + F Q + S S G I+ H+
Sbjct: 2 IKGVKVKKLTKHSDDRGFFAELVRDDE----NLLEHFGQASWSKS-YPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R +S T G + +N + + IP G AHG+ L
Sbjct: 54 EKQDDLWFFPTGHAQVVLYDLRDDSETKGETDVYFMGEDNPMLLLIPKGVAHGYRVLGET 113
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D++I W
Sbjct: 114 PLTIIYFTTTSYNPDQPDEKRIPWNDETIGFNW 146
>gi|256028659|ref|ZP_05442493.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D11]
Length = 110
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 77 FDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVE 136
DI VD+R NS T+G ++++E+++ N ++IP G AHGF+TLE NTE+ YK +FY+ +
Sbjct: 1 MDIVVDLRENSETFGKYLAIELNSKNKKVLFIPKGVAHGFLTLEDNTEIFYKCDNFYNPQ 60
Query: 137 HDSGVAWQDKSIDITWPLL----DTILPSVSEKDQNLPFLNQIDS 177
+ G+ W DK ++I+W + +SEKD+ +
Sbjct: 61 SEIGIIWNDKDLNISWNFKKYGINENELIISEKDKKNMSFKEYKK 105
>gi|308175507|ref|YP_003922212.1| spore coat polysaccharide synthesis protein SpsL [Bacillus
amyloliquefaciens DSM 7]
gi|307608371|emb|CBI44742.1| spore coat polysaccharide synthesis protein SpsL [Bacillus
amyloliquefaciens DSM 7]
gi|328913856|gb|AEB65452.1| spore coat polysaccharide synthesis protein SpsL [Bacillus
amyloliquefaciens LL3]
Length = 153
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I K K D RG+FS+ L + F Q + S S G I+ H+
Sbjct: 4 IEGVKIKKLIKHSDDRGFFSELVRDDE----QLLEHFGQASWSKS-YPGVIKAFHYH--- 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R S T G + +N + + IP G AHG+ L
Sbjct: 56 EKQDDLWFFPTGHAQVVLHDLREESATKGETDVYYMGEDNPMLLLIPKGVAHGYRVLGET 115
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D++I W
Sbjct: 116 PLTIIYFTTMSYNPDQPDEKRIPWNDETIGFDW 148
>gi|328478993|gb|EGF48485.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus MTCC 5462]
Length = 359
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 101 NNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP 160
N Q+ +P GFAHGF+TL N +YKV +Y+ E D G+A+ D I I WP+ T
Sbjct: 1 YNHRQLLVPKGFAHGFITLTPNVNFVYKVEGYYAPEADRGIAFDDPDIGIDWPMS-TAHL 59
Query: 161 SVSEKDQNLPFLN 173
+SEKDQ+ P L
Sbjct: 60 IMSEKDQHHPQLK 72
>gi|319778859|ref|YP_004129772.1| dTDP-glucose 4,6-dehydratase [Taylorella equigenitalis MCE9]
gi|317108883|gb|ADU91629.1| dTDP-glucose 4,6-dehydratase [Taylorella equigenitalis MCE9]
Length = 499
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 8 ILKTRKFEDSRGWFSQTYSSKLLKELGLQD--VFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
+L K+ D+RG + S + L L Q FVQ+N + S GT+RGLHFQ Q
Sbjct: 333 LLHFPKYTDTRG----SVSPRELHALHNQTGTNFVQENFTKSVL-GTLRGLHFQ-RERPQ 386
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
AKL++ + G+I D+ VD+R +S +G W S ++ + +++P G+AHG++TL ++ V
Sbjct: 387 AKLIQVLEGKILDVVVDLRPHSDEFGTWKSFKLKQGD--SLFVPAGYAHGYLTLSESSYV 444
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLL-DTILPSVSEKDQNLPFLNQIDS 177
+YK++DFY + + + D+ ++I W +S KD+ ++ +
Sbjct: 445 LYKLSDFYDPKDQYSIRYDDQYLNIDWGGEISADDYVLSPKDRQGMTWSEFLN 497
>gi|328555485|gb|AEB25977.1| spore coat polysaccharide synthesis protein SpsL [Bacillus
amyloliquefaciens TA208]
Length = 151
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I K K D RG+FS+ L + F Q + S S G I+ H+
Sbjct: 2 IEGVKIKKLIKHSDDRGFFSELVRDDE----QLLEHFGQASWSKS-YPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R S T G + +N + + IP G AHG+ L
Sbjct: 54 EKQDDLWFFPTGHAQVVLHDLREESATKGETDVYYMGEDNPMLLLIPKGVAHGYRVLGET 113
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D++I W
Sbjct: 114 PLTIIYFTTMSYNPDQPDEKRIPWNDETIGFDW 146
>gi|317502876|ref|ZP_07960975.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella salivae DSM 15606]
gi|315666012|gb|EFV05580.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella salivae DSM 15606]
Length = 102
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 77 FDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVE 136
D+AVDIR++SPT+G +V +E+S N Q++IP GFAHGF+ L YKV + Y+ +
Sbjct: 1 MDVAVDIRKSSPTFGKYVMVELSEENKRQLFIPRGFAHGFLVLSDEAIFTYKVDNVYAPQ 60
Query: 137 HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
H++ + W D+ I I WP+ D+ SEKD L +
Sbjct: 61 HEASIRWNDEQIHIEWPI-DSKDVLTSEKDLKACSLQDAE 99
>gi|296331421|ref|ZP_06873893.1| nucleotide sugar epimerase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676406|ref|YP_003868078.1| nucleotide sugar epimerase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296151536|gb|EFG92413.1| nucleotide sugar epimerase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414650|gb|ADM39769.1| nucleotide sugar epimerase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 151
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V++ K K D RG+F++ L + F Q + S S G I+ H+
Sbjct: 2 IDGVKVKKLTKHSDDRGFFAELVRDDE----NLLEHFGQASWSKS-YPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R +S T G + +N + + IP G AHG+ L
Sbjct: 54 EKQDDLWFFPTGHAQVVLYDLREDSKTKGETDVYYMGEDNPMLLLIPKGVAHGYRVLGET 113
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D++I W
Sbjct: 114 PLTIIYFTTMSYNPDQPDEKRIPWNDETIGFNW 146
>gi|260584910|ref|ZP_05852654.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Granulicatella elegans
ATCC 700633]
gi|260157340|gb|EEW92412.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Granulicatella elegans
ATCC 700633]
Length = 449
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 16 DSRGWFSQTYSSKLLKELGLQDVFVQ---DNHSFSFDCGTIRGLHFQRPPYAQAKLVRCI 72
D RG+F + + L + G+ + F Q N+ GTIRG+H Q AKL+
Sbjct: 24 DERGYFVENWRKIDLLKYGVPESFFQEKLQNNVSVSKKGTIRGMHCQ----GWAKLMTVA 79
Query: 73 AGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDF 132
+G +D+R +SPTY +++ G+ I++P G ++G L + Y VT +
Sbjct: 80 SGTFRMCFIDLRLSSPTYKAVDVIDVVP--GMAIFVPAGVSNGAQALTDKGILNYLVTGY 137
Query: 133 YS--VEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQN 168
Y V+H SG+ D+++++ W + + +S KDQ
Sbjct: 138 YDLSVKH-SGIMPLDQTLNLPWDVTGEV--IISSKDQQ 172
>gi|83589036|ref|YP_429045.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Moorella
thermoacetica ATCC 39073]
gi|83571950|gb|ABC18502.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Moorella
thermoacetica ATCC 39073]
Length = 151
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++ K + D RG+F + + F Q + S S G I+ H+
Sbjct: 2 IAGVQVKKLVRHCDDRGFFMEILREDD----EIFSRFGQASMSKS-YPGVIKAFHYHEH- 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R +SPT G + +N + + IP AHG+ L
Sbjct: 56 --QDDLWFFPVGNAQVVLYDLREDSPTRGETNVFYLGEDNPILLLIPRMVAHGYRVLGNE 113
Query: 123 -TEVIYKVTDFYSVEH--DSGVAWQDKSIDITW 152
+IY T Y+ H + + W D +I W
Sbjct: 114 PAIIIYFTTASYNRSHPDEKRIPWDDPTIGFDW 146
>gi|154687905|ref|YP_001423066.1| SpsL [Bacillus amyloliquefaciens FZB42]
gi|154353756|gb|ABS75835.1| SpsL [Bacillus amyloliquefaciens FZB42]
Length = 153
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++ K K D RG+FS+ L + F Q + S S G I+ H+
Sbjct: 4 IEGVKVKKLIKHSDDRGFFSELVRDDE----HLLERFGQASWSKS-YPGVIKAFHYH--- 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R S T G + +N + + IP G AHG+ L
Sbjct: 56 EKQDDLWFFPTGHAQVVLHDLREESATKGETDVYYMGEDNPMLLLIPKGVAHGYRVLGET 115
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D +I W
Sbjct: 116 PLTIIYFTTMSYNPDQPDEKRIPWNDDTIGFDW 148
>gi|330945922|gb|EGH47270.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 91
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ V IL+ + F D RG+F +++++K + GL FVQDNHS S G +RGLH+Q
Sbjct: 7 KLPEVLILEPKVFGDERGFFYESFNAKAFQAATGLTREFVQDNHSRS-QRGVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNS 87
AQ KLVR G++ D+AVDIRR+S
Sbjct: 66 EN-AQGKLVRVTVGKVLDVAVDIRRSS 91
>gi|123471692|ref|XP_001319044.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Trichomonas
vaginalis G3]
gi|121901818|gb|EAY06821.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Trichomonas
vaginalis G3]
Length = 420
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 15 EDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAG 74
D+ G + ++ +LK Q N S S IRG+H K+ C G
Sbjct: 28 SDAHGDLVELFN--ILKNHT-DPEMKQINISRSKL-NVIRGIHVAPY----HKIAFCPYG 79
Query: 75 RIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134
++FD+ VD+R NSPT+ W + + + +P AHG E ++ + Y +
Sbjct: 80 KMFDVCVDMRPNSPTFMKWDGCWLDKDTH--VLVPPYCAHGVFAAEDDSVLCYYQGGCFF 137
Query: 135 VEHDSGVAWQDKSIDITWPLL-DTILPSVSEKDQN 168
D + D I I WP ++ +SEKD N
Sbjct: 138 PHLDFAINPMDPQIGIKWPTPVNSDKYVLSEKDTN 172
>gi|291486370|dbj|BAI87445.1| spore coat polysaccharide biosynthesis protein SpsL [Bacillus
subtilis subsp. natto BEST195]
Length = 151
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V++ K K D RG+F++ L + F Q + S S G I+ H+
Sbjct: 2 IDGVKVKKLMKHSDDRGFFAELVRDDE----NLLEHFGQASWSKS-YPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R +S T G + +N + + IP G AHG+ L
Sbjct: 54 EKQDDLWFFPTGHAQVVLYDLREDSKTKGETDVYYMGEDNPMLLLIPKGVAHGYRVLGET 113
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D++I W
Sbjct: 114 PLTIIYFTTMSYNPDQPDEKRIPWNDETIGFNW 146
>gi|123502962|ref|XP_001328402.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Trichomonas
vaginalis G3]
gi|121911345|gb|EAY16179.1| dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Trichomonas
vaginalis G3]
Length = 347
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 37 DVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSL 96
Q S S IRGLH KLV+C G+ FD+ VD+R +SPT+ W
Sbjct: 44 TQMPQITVSRSQK-NVIRGLHCS----PHHKLVQCPTGKAFDVVVDLRPDSPTFLQWDGH 98
Query: 97 EISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL- 155
I ++IP AHGF E +T ++Y ++ E D + + DK++++ WP
Sbjct: 99 WID--RTHHMFIPPFCAHGFFASEDDTAILYLQGGCFAPELDFSLNYLDKTVNVDWPKPI 156
Query: 156 DTILPSVSEKDQNLPFLNQI 175
D +S KD+ P L++
Sbjct: 157 DADDYVISPKDRGNPMLDEA 176
>gi|300728518|ref|ZP_07061877.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
gi|299774236|gb|EFI70869.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella bryantii B14]
Length = 62
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHF 58
I+ V I++ + F+D+RG+F +++S + +E + FVQDN S S G +RGLHF
Sbjct: 7 KIDGVVIIEPKVFKDARGYFFESFSQREFEEKVRKINFVQDNESMS-SYGVMRGLHF 62
>gi|15615928|ref|NP_244232.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose
epimerase) [Bacillus halodurans C-125]
gi|10175989|dbj|BAB07085.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose
epimerase) [Bacillus halodurans C-125]
Length = 151
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V++ + K+ D RG+F++ L + F Q + S S G I+ H+
Sbjct: 2 IEGVKVKRLTKYCDDRGFFAELVRDDE----HLLEHFGQASVSMS-YPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EM 121
Q L +G + D+R NS T G + N + + IP G AHG+ L
Sbjct: 54 NEQDDLWYFPSGNAQVVLHDLRPNSKTAGITDVYYMGEENPILLLIPKGVAHGYRVLGGK 113
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + +AW D SI+ W
Sbjct: 114 PATIIYFTTKSYNRKSPDEKRLAWDDPSINFDW 146
>gi|50812301|ref|YP_054595.1| nucleotide sugar epimerase [Bacillus subtilis subsp. subtilis str.
168]
gi|221311745|ref|ZP_03593592.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316071|ref|ZP_03597876.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320982|ref|ZP_03602276.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325267|ref|ZP_03606561.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321313340|ref|YP_004205627.1| nucleotide sugar epimerase [Bacillus subtilis BSn5]
gi|42559775|sp|Q7WY56|SPSL_BACSU RecName: Full=Spore coat polysaccharide biosynthesis protein spsL
gi|32468835|emb|CAE01469.1| nucleotide sugar epimerase [Bacillus subtilis subsp. subtilis str.
168]
gi|320019614|gb|ADV94600.1| nucleotide sugar epimerase [Bacillus subtilis BSn5]
Length = 151
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V++ K K D RG+F++ L + F Q + S S G I+ H+
Sbjct: 2 IDGVKVKKLMKHSDDRGFFAELVRDDE----NLLEHFGQASWSKS-YPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D+R +S T G + +N + + IP G AHG+ L
Sbjct: 54 EKQDDLWFFPTGHAQVVLYDLREDSKTKGETDVYYMGEDNPMLLLIPKGVAHGYRVLGET 113
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + + + W D++I W
Sbjct: 114 PLTIIYFTTMSYNPDQPDEKRIPWDDETIGFNW 146
>gi|251781269|ref|ZP_04824185.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243081716|gb|EES47777.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 73
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ + F D+RG+F +TY+ + E GL +FVQDN S F G +RGLHFQ+
Sbjct: 10 SIYGVYIIEPKVFGDNRGYFMETYNREQFLEAGLDMIFVQDNESR-FTKGVLRGLHFQKN 68
>gi|73695997|gb|AAZ80804.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Arcobacter butzleri]
Length = 116
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 71 CIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVT 130
CI G I D+AVD R S ++G VS+E+++ Q++IP GF HGF L + V+ KV
Sbjct: 2 CIKGEILDVAVDFRVGSASFGKVVSIELNSEENKQLFIPRGFLHGFSVLSKDALVMIKVD 61
Query: 131 DFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEYD 182
+++++ GV + D+ ++I W + + VSE D+NL +SPF Y+
Sbjct: 62 RYFALDESIGVRYNDEDLNIDWKIKKESV-IVSEADKNLLAFKDTNSPFMYN 112
>gi|157694175|ref|YP_001488637.1| spore coat polysaccharide biosynthesis protein SpsL [Bacillus
pumilus SAFR-032]
gi|157682933|gb|ABV64077.1| spore coat polysaccharide biosynthesis protein SpsL [Bacillus
pumilus SAFR-032]
Length = 151
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V+ K K D RG+F++ L F Q + S S G I+ H+
Sbjct: 2 IDGVQTKKLMKHCDDRGFFAELIRDDE----PLLKRFGQASWSKS-FPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + G + D+R +SPT + +N + + IP G AHG+ L
Sbjct: 54 EKQDDVWFFPVGHAQVVLYDLREDSPTRRQTDVYYMGEDNPMLLLIPKGVAHGYRVLGET 113
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+++Y T+ Y + + +AW D++I W
Sbjct: 114 PLQIVYFTTESYDPKNPDEKRIAWNDETIGFDW 146
>gi|195978346|ref|YP_002123590.1| dTDP-4-Keto-6-Deoxyglucose-3 5-epimerase RmlC [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975051|gb|ACG62577.1| dTDP-4-Keto-6-Deoxyglucose-3 5-epimerase RmlC [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 180
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 19/171 (11%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLH 57
I + D+RGWF + + + + LG + F Q+N SFS +RGLH
Sbjct: 18 IPGLLEFDIPVRGDNRGWFKENFQKEKMIPLGFPEQFFAAGKLQNNISFSRKH-VLRGLH 76
Query: 58 FQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFM 117
+ K + A R ++G I A+ I++P G A+GF
Sbjct: 77 AE----PWDKYISVADEGKVLGAWVDLREGDSFGHTYQTVIDASK--GIFVPRGVANGFQ 130
Query: 118 TLEMNTEVIYKVTDFYS----VEHDSGVAWQDKSIDITWPLLDTILPSVSE 164
L Y V D+++ ++ V + D S+ I W + VSE
Sbjct: 131 VLTDKVAYTYLVNDYWALELKPKYAF-VNYADPSLGIAW--ENLEQAEVSE 178
>gi|220934483|ref|YP_002513382.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995793|gb|ACL72395.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thioalkalivibrio sp.
HL-EbGR7]
Length = 124
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V +++ R F D RG+F++ +S E+ + FVQDN S S G +RG+H Q P
Sbjct: 12 IDGVLVIEPRVFGDHRGFFTEYWSQPRYAEVVRHEQFVQDNLSCS-RKGVLRGVHVQ-NP 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYI 108
Q LV + G +FD+ VDI SPT+G W + +S N + Y
Sbjct: 70 NPQGNLVYVLYGEVFDLVVDIHLGSPTFGQWYGVTLSVENRKRFYT 115
>gi|23098582|ref|NP_692048.1| spore coat polysaccharide synthesis [Oceanobacillus iheyensis
HTE831]
gi|22776808|dbj|BAC13083.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose
epimerase) [Oceanobacillus iheyensis HTE831]
Length = 151
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I + K D RG+ ++ L F Q S S G I+ H+
Sbjct: 2 IEGVQIKRIEKHCDDRGYLAELVRDDE----HLLSHFGQATISMS-YPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EM 121
Q L +G + D+R+N+ T G + + +N + + IP G AHG+ L
Sbjct: 54 EKQDDLWYFASGNAQVVLYDLRKNTNTTGRTDVIYMGEHNPILLLIPKGIAHGYRVLGSK 113
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+IY T Y+ + +AW D I+ W
Sbjct: 114 PATIIYFTTKSYNKNDPDEKRLAWNDPEINFNW 146
>gi|237750314|ref|ZP_04580794.1| LOW QUALITY PROTEIN: dTDP-4-dehydrorhamnose 3,5-epimerase
[Helicobacter bilis ATCC 43879]
gi|229374208|gb|EEO24599.1| LOW QUALITY PROTEIN: dTDP-4-dehydrorhamnose 3,5-epimerase
[Helicobacter bilis ATCC 43879]
Length = 149
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 24 TYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDI 83
++ + + +L ++ + + + +RG+H KLV C+ G + + VD
Sbjct: 2 IFTEEHIGKLIPNNIRFKHDKIITSCHNVLRGIHGDV---KTYKLVTCVYGEVHQVVVDC 58
Query: 84 RRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK--VTDFY-SVEHDSG 140
R++S TY W I+ NN I IP + + + YK Y +
Sbjct: 59 RKDSQTYLKWEKFIINENNQQIILIPPNMGNSYYVSSNHAVYYYKLAYDGEYLDAQDQFT 118
Query: 141 VAWQDKSIDITWPLLDTILPSVSEKD 166
AW D+ I I WP P +SE+D
Sbjct: 119 YAWNDEKIGINWPTTK---PILSERD 141
>gi|288917944|ref|ZP_06412303.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
gi|288350599|gb|EFC84817.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia sp. EUN1f]
Length = 71
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 112 FAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPF 171
AHG+ TL +TE Y++ ++ HD G+ + D + I WPL + +S+KD+ P
Sbjct: 3 LAHGYQTLVDDTEATYQMNVPFTPGHDRGLRFDDPRLGIAWPLP---VSVISDKDRAWPL 59
Query: 172 L 172
L
Sbjct: 60 L 60
>gi|194016583|ref|ZP_03055197.1| spore coat polysaccharide biosynthesis protein SpsL [Bacillus
pumilus ATCC 7061]
gi|194012056|gb|EDW21624.1| spore coat polysaccharide biosynthesis protein SpsL [Bacillus
pumilus ATCC 7061]
Length = 151
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V+ K K D RG+F++ + F Q + S S G I+ H+
Sbjct: 2 IDGVQTKKLMKHCDDRGFFAELIRDDE----PMLQRFGQASWSKS-FPGVIKAFHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + AG + D+R +SPT G + +N + + IP G AHG+ L
Sbjct: 54 EKQDDVWFFPAGHAQVVLYDLREDSPTKGQTDVYYMGEDNPMLLLIPKGVAHGYRVLGET 113
Query: 123 T-EVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+++Y T+ Y + + +AW D++I W
Sbjct: 114 PLQIVYFTTESYDPKNPDEKRIAWNDETIGFDW 146
>gi|229578405|ref|YP_002836803.1| dTDP-4-dehydrorhamnose 35-epimerase related [Sulfolobus islandicus
Y.G.57.14]
gi|228009119|gb|ACP44881.1| dTDP-4-dehydrorhamnose 35-epimerase related [Sulfolobus islandicus
Y.G.57.14]
Length = 120
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 53 IRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGF 112
+RGLH+Q PP Q K+V I GRI D+AVDIR++S ++G +V E+S NN ++IP GF
Sbjct: 1 MRGLHYQLPPKEQGKIVTVIKGRILDVAVDIRKSSESFGKYVYAELSENNHYMLWIPPGF 60
Query: 113 AHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFL 172
AHGF LE +T V + + YS ++ + + I WP+ + VSEKD P L
Sbjct: 61 AHGFQALEESTIVYFITYNEYSPLNERCINYSI----INWPIKN---IVVSEKDAKCPPL 113
Query: 173 NQID 176
N+ +
Sbjct: 114 NKAE 117
>gi|298490026|ref|YP_003720203.1| dTDP-4-dehydrorhamnose 3,5-epimerase ['Nostoc azollae' 0708]
gi|298231944|gb|ADI63080.1| dTDP-4-dehydrorhamnose 3,5-epimerase ['Nostoc azollae' 0708]
Length = 110
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLL-KELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V +++ + D RG+F ++Y+ ++ +++G+ FVQDNHS S +RGLH+Q
Sbjct: 7 EISDVLLIEPQILGDKRGFFYESYNERVFLEKVGILSHFVQDNHSRS-IKDVLRGLHYQI 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGC 92
Q KLVR + G +FD+AVD+R+ S T+G
Sbjct: 66 EK-PQGKLVRVVVGSVFDVAVDLRKISATFGQ 96
>gi|291617820|ref|YP_003520562.1| RfbC [Pantoea ananatis LMG 20103]
gi|291152850|gb|ADD77434.1| RfbC [Pantoea ananatis LMG 20103]
Length = 127
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGL-QDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I++ + D RG+F +T+ + +EL FVQDN+S S +RGLHFQ+
Sbjct: 7 KIADVKIIQPAVYGDDRGFFLETFEKRRYQELLETHLEFVQDNYSRSGRH-VLRGLHFQK 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISA 100
Q KLVR + G +FD+AVDIR SPT+G W S+ +S
Sbjct: 66 TE-PQGKLVRVVRGEVFDVAVDIRPGSPTFGQWESILLSE 104
>gi|317502877|ref|ZP_07960976.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella salivae DSM
15606]
gi|315666013|gb|EFV05581.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Prevotella salivae DSM
15606]
Length = 85
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I V I++ R F+D+RG+F + + + ++ + F+QDN S S G +RGLH+Q+
Sbjct: 7 DIKGVFIIEPRVFQDARGYFFEAWKDEEFQQKIGKIKFIQDNESKS-SYGVLRGLHYQKR 65
Query: 62 P 62
Sbjct: 66 R 66
>gi|297250186|ref|ZP_06933881.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella abortus bv. 5 str.
B3196]
gi|297172981|gb|EFH32351.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brucella abortus bv. 5 str.
B3196]
Length = 148
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+NIN ++ + +D RGWF++ Y E L+ F Q + SFS + GT+RGLH+Q
Sbjct: 65 LNINGAWSIEPERLKDERGWFARVYCEAAFAERKLETHFPQHSLSFSREKGTLRGLHYQN 124
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIR 84
P+++ KLV C+ G ++D+ VD+R
Sbjct: 125 EPHSETKLVTCLQGIVWDVLVDLR 148
>gi|304389155|ref|ZP_07371190.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis ATCC
13091]
gi|304336887|gb|EFM03086.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Neisseria meningitidis ATCC
13091]
Length = 66
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLH 57
I V++L+ + F D+RG+F +T+ + K + FVQ+NHS S G +RGLH
Sbjct: 13 IPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTFVQENHSKS-GKGVLRGLH 66
>gi|328478990|gb|EGF48483.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus rhamnosus
MTCC 5462]
Length = 84
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 57/80 (71%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F D+RG+F++TY+ + E G+++ F QDN S S + G +RG+H+Q PYAQ KLVR +
Sbjct: 2 FGDNRGFFTETYTREKFVEAGIKNDFNQDNQSLSAEAGVLRGMHYQMAPYAQTKLVRVVT 61
Query: 74 GRIFDIAVDIRRNSPTYGCW 93
G + D+ VDIR+ SPTYG W
Sbjct: 62 GVVEDVLVDIRKGSPTYGQW 81
>gi|152777|gb|AAA16933.1| dTDP-6-deoxy-L-lyxo-4 hexulose 4-reductase [Shigella dysenteriae]
Length = 107
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 85 RNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQ 144
PT+G W+ + +SA Q++IP GFAHGF+ L E +YK T++Y+ + +++
Sbjct: 12 NRHPTFGKWIGVNLSAEIKRQLWIPEGFAHGFLVLSETAEFVYKTTNYYNPSFEKSISYS 71
Query: 145 DKSIDITWPLLDTILPSVSEKDQNLPFL 172
D +I I WP L + +S KD N
Sbjct: 72 DPTIKIQWPNLQDMHVKLSNKDLNAKNF 99
>gi|145595422|ref|YP_001159719.1| hypothetical protein Strop_2902 [Salinispora tropica CNB-440]
gi|145304759|gb|ABP55341.1| hypothetical protein Strop_2902 [Salinispora tropica CNB-440]
Length = 104
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 106 IYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEK 165
+Y+ G GF L + V Y + Y+ + V D + I WP+ P +S++
Sbjct: 21 VYLAEGLGQGFCALSEDATVSYLCSTTYNSAVEHAVHPLDPDMGIEWPV---RSPLLSDR 77
Query: 166 DQNLPFLN 173
D P L
Sbjct: 78 DAAAPSLA 85
>gi|313844159|ref|YP_004061822.1| hypothetical protein OlV1_190 [Ostreococcus lucimarinus virus OlV1]
gi|312599544|gb|ADQ91566.1| hypothetical protein OlV1_190 [Ostreococcus lucimarinus virus OlV1]
Length = 396
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 22/166 (13%)
Query: 12 RKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRC 71
R F+DSRG ++ Q + + + +RGLH P KL+
Sbjct: 2 RNFKDSRGEI--LFNIDE-----PPFEIKQC-FTTTNERHVLRGLHCSPYP----KLITV 49
Query: 72 IAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTD 131
+G+IFD+ V N G + I AHG+ E +E++Y +
Sbjct: 50 NSGKIFDVIVKPDGK--------YDAYILNKGDSLLIEANCAHGYFCYEK-SEIVYFLGG 100
Query: 132 FYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
++ D W D ++I WP + +S KD + P ID+
Sbjct: 101 VFNSVLDKSYLWNDPILNIDWP-SEAKNAIISLKDLSNPTFKNIDT 145
>gi|40388619|gb|AAR85524.1| RmlC [Thermoanaerobacterium thermosaccharolyticum]
Length = 83
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + I++T FED+RG+F +TY+ K GL VFVQDN S S G +RGLHFQ+
Sbjct: 10 DIEGLYIIETGIFEDNRGYFMETYNYNDFK-AGLDMVFVQDNQSKS-KKGVLRGLHFQKK 67
Query: 62 PYA 64
Sbjct: 68 HPQ 70
>gi|256825665|ref|YP_003149625.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme [Kytococcus
sedentarius DSM 20547]
gi|256689058|gb|ACV06860.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme [Kytococcus
sedentarius DSM 20547]
Length = 166
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 45 SFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGL 104
+ G +RG H P KL+ C AG ++D+ +D+R++SPT+ + + ++
Sbjct: 23 VLTNRRGALRGFHVAEHP-GHTKLITCAAGAVWDVLIDLRQDSPTFRGVAEVHVEGSDPT 81
Query: 105 QIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSE 164
+ P G AHGF++L + V+ V D ++ + G D ++ + WPL D S
Sbjct: 82 AVLCPAGVAHGFLSLTEGSVVLIGVDDNFAGVTEHGFDALDPALGVRWPLPDDDF-IRSA 140
Query: 165 KDQNLPFLNQ-IDSPFEY 181
+D + P L + S F +
Sbjct: 141 RDASAPPLADLLGSGFRF 158
>gi|19705020|ref|NP_602515.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|296329269|ref|ZP_06871770.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|19712930|gb|AAL93814.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|296153625|gb|EFG94442.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 82
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 105 QIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILP 160
++IP FAHGF+TLE NTE+ YK +FY++++++G+ W D+ ++I W +
Sbjct: 1 MLFIPKSFAHGFLTLEDNTEIFYKCDNFYNLQNEAGIIWNDRDLNIDWNFKKYNINENEL 60
Query: 161 SVSEKDQNLPFLNQIDS 177
+SEKD+ +
Sbjct: 61 IISEKDKRNISFKEYKK 77
>gi|147921181|ref|YP_685008.1| dTDP-4-dehydrorhamnose 3,5 epimerase [uncultured methanogenic
archaeon RC-I]
gi|110620404|emb|CAJ35682.1| dTDP-4-dehydrorhamnose 3,5 epimerase [uncultured methanogenic
archaeon RC-I]
Length = 157
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 58/163 (35%), Gaps = 15/163 (9%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I V I K R D RGW + K+ G + + G ++G H+
Sbjct: 3 DIEGVVIKKLRVIPDERGWLMEILRCDDPMFKQFG-------QVYVTTAYPGVVKGWHYH 55
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q CI G + D R SPT G + L + N + I +P G HGF +
Sbjct: 56 ---KKQTDNFTCIHGMMKVALYDAREGSPTRGNLMELFVGEKNPILISVPPGVYHGFKGI 112
Query: 120 -EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLLDTIL 159
+ T Y+ + + K I W LL +
Sbjct: 113 GTETAYFLSVPTLPYNYAEPDEYRLPPDSKEIPYDWGLLPGLK 155
>gi|158318027|ref|YP_001510535.1| dTDP-4-dehydrorhamnose 35-epimerase related [Frankia sp. EAN1pec]
gi|158113432|gb|ABW15629.1| dTDP-4-dehydrorhamnose 35-epimerase related [Frankia sp. EAN1pec]
Length = 198
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 12/179 (6%)
Query: 1 MNINPVRILKTRKFEDS---RGWFSQTYSSKLLK-ELGLQDVFVQDNHSFSFDCGTIRGL 56
++I + F D RG + +++ G V N + S G +RG+
Sbjct: 14 LSIEGAFLF---VFPDQQDQRGSRRSWFDEQVVHTATGRPLGPVLANVTVSHQ-GALRGI 69
Query: 57 HFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGF 116
+ R A K V C++G + D+ VD+R SPT+G + + +++ G H
Sbjct: 70 KYSRDGRA-GKYVSCLSGMVLDVVVDLRVGSPTFGASHIRRLDGGQPVGLFLAPGLGHAT 128
Query: 117 MTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQI 175
+ L + Y + + V D + I WP + +S+ D P L Q
Sbjct: 129 LALTEQAAMAYLHPA-HDEGPEVAVHPFDSDLSIAWP--SGLSFLLSDGDTAAPTLGQA 184
>gi|260220290|emb|CBA27681.1| Type IV pilus assembly protein pilF [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 596
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQ 41
I V +L+ + F D RG+F ++++ ++ +E G+ FVQ
Sbjct: 9 IADVLLLEPKVFGDERGFFFESFNERVFREATGVTLPFVQ 48
>gi|329768386|ref|ZP_08259880.1| hypothetical protein HMPREF0428_01577 [Gemella haemolysans M341]
gi|328837139|gb|EGF86780.1| hypothetical protein HMPREF0428_01577 [Gemella haemolysans M341]
Length = 60
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 126 IYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID--SPFEY 181
+YK ++Y+VE D+G+A+ D+ + I W + D +SEKD+ LP + + + F+Y
Sbjct: 1 MYKCDNYYNVEADAGIAFDDEVLGIDWQI-DLSKAIISEKDKKLPTFKEFEKDNDFKY 57
>gi|167933030|ref|ZP_02520117.1| dTDP-4-dehydrorhamnose reductase [candidate division TM7
single-cell isolate TM7b]
Length = 76
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHSFSFDCGTIRGLHFQR 60
I + ++K D+RGWF + Y + ++ LGL VQ+N SF+ G RGLH +
Sbjct: 18 IPGLFVVKLPVHGDNRGWFKENYQKEKMEALGLPSFDIVQNNISFNDKAGATRGLHAEP 76
>gi|330508399|ref|YP_004384827.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosaeta concilii GP-6]
gi|328929207|gb|AEB69009.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosaeta concilii GP-6]
Length = 165
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 15/150 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + I ++F D RG+F++ + +QD VQ N S S+ R H
Sbjct: 2 LPGIVIKPLKRFADERGFFTEIMRKDW--KDVIQDDIVQANMSLSYPGMV-RAWHRH--E 56
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + G + A D + + +N + +P + HGF +
Sbjct: 57 RGQVDHFLVVRGALKICAYDDDTRELDE-----IISAGDNPQMVRMPGHYWHGFGVVGNE 111
Query: 123 -TEVIYKVTDFYS---VEHDSGVAWQDKSI 148
+IY V Y + + W D +I
Sbjct: 112 QATLIYFVNRLYDYASPDEERR-PWNDPAI 140
>gi|330368659|gb|AEC11781.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae]
gi|330368664|gb|AEC11785.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae]
gi|330368669|gb|AEC11789.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae]
gi|330368674|gb|AEC11793.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Brachyspira hyodysenteriae]
Length = 68
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 120 EMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPF 179
+ YK +DFY E + G+ + DK+I+I W DT VS+KD LP ++ F
Sbjct: 1 SESAVFAYKCSDFYHPEEEGGIIYNDKNINIDW-TCDTKDVLVSDKDLKLPEFDKNKKYF 59
Query: 180 EYDG 183
DG
Sbjct: 60 SLDG 63
>gi|237751852|ref|ZP_04582332.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376756|gb|EEO26847.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 171
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 5/139 (3%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ V I+ KF+D RG ++S+ + +L + + IRG+H
Sbjct: 36 KLKGVYIITPSKFQDLRGEIWTAFTSEKIDKLLPSGLRFIHDKFIYSHHNVIRGIHGD-- 93
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
K C+ G I + VD R++SPTY W I+ N I +P GF +
Sbjct: 94 -LKTYKFATCVYGEIHQVVVDCRKDSPTYLQWEKFTINQENQQIILVPAGFGNAHCVRSK 152
Query: 122 NTEVIYKVT--DFYSVEHD 138
+ YK Y +
Sbjct: 153 SAVYYYKCAYLGEYVDADE 171
>gi|296159895|ref|ZP_06842716.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Burkholderia
sp. Ch1-1]
gi|295889878|gb|EFG69675.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Burkholderia
sp. Ch1-1]
Length = 313
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ-DVFVQDNHS 45
+ V+I++ + F D+RG+F +++++K F N
Sbjct: 10 LPEVKIIEPKVFGDARGFFFESFNAKEFVARIWPGFRFETSNVQ 53
>gi|114798886|ref|YP_759519.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Hyphomonas neptunium
ATCC 15444]
gi|114739060|gb|ABI77185.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Hyphomonas neptunium
ATCC 15444]
Length = 130
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 52/180 (28%), Gaps = 58/180 (32%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+I + ++K R+F + Y + G +QDN +R LH Q
Sbjct: 6 SIPEIFLVKVRRF--------EVYRQAPYDQNGPSGPILQDNQPLPHARSLLRWLHVQIV 57
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
P QAKL +
Sbjct: 58 PSGQAKLS------------------------------------------------NIRD 69
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFEY 181
+Y+ D +AW SI I WPL P SEK P L+ + F+Y
Sbjct: 70 TLASVYRQKMA-DRALDRCLAWNAPSIAIDWPLQGN-APIQSEKVAAQPNLSDLPDYFQY 127
>gi|297625076|ref|YP_003706510.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Truepera
radiovictrix DSM 17093]
gi|297166256|gb|ADI15967.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Truepera
radiovictrix DSM 17093]
Length = 197
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 2/145 (1%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V + +K G F + GL F S S P
Sbjct: 41 EIAGVWLKPLKKHRGDNGAFMEYLRLDEGAAEGLPAPFTVRQLSVSHAQPGRINAFHIHP 100
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q +L I G++ VD+R SPT G + +S Q+++P G AHG+
Sbjct: 101 REPQNELWTVIQGQLKVWLVDLRATSPTEGNKRAFILSGEEPAQLFVPAGVAHGYQAGPE 160
Query: 122 NTEVIYKVTDFYSVEH--DSGVAWQ 144
++Y + ++ EH + + W
Sbjct: 161 GALLLYTMDQQFNAEHPNEGRLPWD 185
>gi|296109922|ref|YP_003616871.1| dTDP-4-dehydrorhamnose 35-epimerase related protein
[Methanocaldococcus infernus ME]
gi|295434736|gb|ADG13907.1| dTDP-4-dehydrorhamnose 35-epimerase related protein
[Methanocaldococcus infernus ME]
Length = 39
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLK 31
+ I V ++K + F D RG+F +TY K
Sbjct: 8 LEIPGVILIKPKVFGDERGFFMETYKKSDFK 38
>gi|219852974|ref|YP_002467406.1| dTDP-4-dehydrorhamnose 3,5 epimerase [Methanosphaerula palustris
E1-9c]
gi|219547233|gb|ACL17683.1| dTDP-4-dehydrorhamnose 3,5 epimerase [Methanosphaerula palustris
E1-9c]
Length = 158
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 15/162 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V I + D RGW + + + + G + + G ++G H+
Sbjct: 5 IDGVVIKPLKVIPDERGWLMEILRNDDPIFTQFG-------QVYMTTAYPGVVKGWHYH- 56
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL- 119
Q C+ G + D R S TYG + + + N + I +P G HGF +
Sbjct: 57 --KKQTDNFTCVHGMMKVALYDKREGSSTYGALMEIFVGEKNPVLISVPPGVYHGFKGIG 114
Query: 120 EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLLDTIL 159
+ T Y+ + + I W LL +
Sbjct: 115 TETAFFVSVPTLPYNYAEPDEYRLPPDTDEIPYDWGLLPGLK 156
>gi|284162304|ref|YP_003400927.1| dTDP-4-dehydrorhamnose 3 5-epimerase-like protein [Archaeoglobus
profundus DSM 5631]
gi|284012301|gb|ADB58254.1| dTDP-4-dehydrorhamnose 3 5-epimerase-like protein [Archaeoglobus
profundus DSM 5631]
Length = 165
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 14/149 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + I ++F D RG+F++ +D VQ N S + G +R H
Sbjct: 2 LPGIVIKPLKRFADERGFFTEIMRKDW---EIFEDEIVQANLSIT-YPGIVRAWHKH--E 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE-M 121
Q CI G I A D + + + +N + IP + HGF L
Sbjct: 56 RGQVDYFVCIKGAIKICAYDDKTQELAE-----IISTGDNPQIVRIPGHYWHGFKALGVE 110
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSI 148
++Y V Y + + W D +I
Sbjct: 111 PAMLVYFVNRLYDYKNPDEVRRPWNDPTI 139
>gi|227829546|ref|YP_002831325.1| dTDP-4-dehydrorhamnose 3 5-epimerase-like protein [Sulfolobus
islandicus L.S.2.15]
gi|227455993|gb|ACP34680.1| dTDP-4-dehydrorhamnose 3 5-epimerase-like protein [Sulfolobus
islandicus L.S.2.15]
Length = 86
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V ++K + F D+RG+F + + +++ + +Q N SFS G +RGLH+Q PP
Sbjct: 11 GVILIKPKAFPDNRGYFKEIFKESEFRKMNIPTP-LQANVSFS-KPGVVRGLHYQLPPKG 68
>gi|288932729|ref|YP_003436789.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Ferroglobus placidus DSM 10642]
gi|288894977|gb|ADC66514.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Ferroglobus placidus DSM 10642]
Length = 166
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + + ++F D RG+F++ +D VQ N S + G +R H
Sbjct: 2 LPGIVVKPLKRFADERGFFTEIMRKDW--SDIFKDEIVQANLSIT-YPGIVRAWHKH--E 56
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE-M 121
Q CI G I D + + + +N + +P + HGF +
Sbjct: 57 RGQVDYFVCIKGAIKICVYDEKTQELAE-----IISTGDNPQVVRVPGHYWHGFKAIGVE 111
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSI 148
++Y V+ Y E + W D ++
Sbjct: 112 PAMLVYFVSRLYDYENPDEVRRPWNDPTV 140
>gi|329766678|ref|ZP_08258221.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329136933|gb|EGG41226.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 190
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
V+IL D+RG+ S+ + + ++ Q N S S G IR H
Sbjct: 30 GVKILIPEIKHDARGYVSEVFRADWIEFFDGTFP-KQVNLSMS-KPGIIRAWHRHSRN-- 85
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN-T 123
Q G++ D + S T+G V + + + + +P F HG T+ +
Sbjct: 86 QTDYFLVKKGKMKICIYDGDKKSNTFGKLVEVFVGDDEFKIVKVPGNFWHGTQTISDYPS 145
Query: 124 EVIYKVTDFYSVE--HDSGVAWQDKSI 148
E IY +T+ Y E + + W D S+
Sbjct: 146 ETIYFLTNLYDYENPDEERLDWNDPSV 172
>gi|260892181|ref|YP_003238278.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ammonifex degensii KC4]
gi|260864322|gb|ACX51428.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ammonifex degensii KC4]
Length = 153
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 15/160 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V++ K R D RG+ + S + G + + G I+ H+ +
Sbjct: 4 IHGVQVKKLRLIPDDRGFLMECLRSDWPEFTKFG-------QAYVTACYPGVIKAWHYHK 56
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL- 119
Q CI G D R +SPT G I N I IP HGF +
Sbjct: 57 V---QWDHFVCIYGMAKVALYDPREDSPTRGMVNVFHIGLLNPCLIKIPPRVYHGFTSEG 113
Query: 120 EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLLDT 157
++ T+ Y+ E + V + D SI +W +
Sbjct: 114 GQLALILNIPTELYNYEEPDEYRVPYNDPSIPFSWEVKHG 153
>gi|94992307|ref|YP_600406.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS2096]
gi|94545815|gb|ABF35862.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS2096]
Length = 164
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 19/160 (11%)
Query: 26 SSKLLKELGLQDVFV-----QDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA 80
S + + +G + F Q+N SFS +RGLH + + G++
Sbjct: 8 SKEKMLPIGFPERFFEEGKLQNNVSFSRQH-VLRGLHAEPWDKY---ISVADDGKVLGAW 63
Query: 81 VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS----VE 136
VD+R + ++ + +++P G A+GF L Y V D+++ +
Sbjct: 64 VDLREGETFGNVYQTVI---DASKGMFVPRGVANGFQVLSETVSYSYLVNDYWALDLKPK 120
Query: 137 HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ V + D S+ ITW + VSE D+N P L+ +
Sbjct: 121 YAF-VNYADPSLGITW--ENLAAAEVSEADKNHPLLSDVK 157
>gi|85860186|ref|YP_462388.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Syntrophus aciditrophicus SB]
gi|85723277|gb|ABC78220.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Syntrophus aciditrophicus SB]
Length = 151
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V++ K R D RG + + G+ F Q + + G ++G H+
Sbjct: 2 IDGVQVKKLRVIPDERGRLMEILRADD----GMFKGFGQV-YMTTAYPGVVKGWHYH--- 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE-M 121
Q + + G + + D R NSPT G N + ++IP HGF +
Sbjct: 54 KKQYDNMAVVKGMMKIVLYDSRENSPTRGEVNVFFAGEYNPVLLHIPPFVYHGFKCVSTE 113
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
VI T+ Y+ + V + I W
Sbjct: 114 EAIVINTPTEVYNYGEPDEFRVHPHNNDIPYNW 146
>gi|282165386|ref|YP_003357771.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Methanocella
paludicola SANAE]
gi|282157700|dbj|BAI62788.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Methanocella
paludicola SANAE]
Length = 159
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 15/162 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V + + R D RG+ + K+ G + S G ++G H+
Sbjct: 6 IDGVHVKQLRLNVDERGFLMEIMRPDWETYKKFG-------QAYVTSAYPGVVKGWHYH- 57
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL- 119
Q C+ G + + D R NSPT G I N +Q+ IP HGF +
Sbjct: 58 --KKQFDNFVCVRGMMKVVLYDGRENSPTKGVINEFFIGERNPVQVQIPPYVYHGFKCVG 115
Query: 120 EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLLDTIL 159
++ T+ Y + + + K I W L +
Sbjct: 116 TEEALIVNVPTEMYDYKEPDEYRLPPDTKEIPYDWGLAPGLK 157
>gi|327400451|ref|YP_004341290.1| Cupin 2 barrel domain-containing protein [Archaeoglobus veneficus
SNP6]
gi|327315959|gb|AEA46575.1| Cupin 2 conserved barrel domain protein [Archaeoglobus veneficus
SNP6]
Length = 165
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 14/149 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + + ++F D RG+F++ +D VQ N S + G +R H
Sbjct: 2 LPGIVVKPLKRFADERGFFTEIMRKDW---EIFEDEIVQANLSIT-YPGIVRAWHKHERG 57
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ A+ I + + N + +P + HGF +
Sbjct: 58 -------QVDYFVCVKGAIKICAYDDETQELNEIVSTGENPQIVRVPGHYWHGFKAVGNE 110
Query: 123 -TEVIYKVTDFYSVE--HDSGVAWQDKSI 148
++Y V Y E + W D ++
Sbjct: 111 PAMLVYFVNKLYDYENPDEVRRPWNDPTV 139
>gi|322412000|gb|EFY02908.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 153
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 30 LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT 89
E ++ +Q+N SFS +RGLH + + G++ VD+R
Sbjct: 6 FPEHFFEEGKLQNNVSFSRQH-VLRGLHAEPWDKY---ISVADDGKVLGAWVDLREGDTF 61
Query: 90 YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS----VEHDSGVAWQD 145
+ ++ + I++P G A+GF L Y V D+++ ++ V + D
Sbjct: 62 GNVYQTVI---DASKGIFVPRGVANGFQVLSETVSYSYLVNDYWALDLKPKYAF-VNYAD 117
Query: 146 KSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
S+ ITW + VSE D+N P L+ +
Sbjct: 118 PSLGITW--ENLAAAEVSEADKNHPLLSDVK 146
>gi|117926764|ref|YP_867381.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Magnetococcus sp.
MC-1]
gi|117610520|gb|ABK45975.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Magnetococcus
sp. MC-1]
Length = 172
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 37 DVFVQDNHSFSFDC----GTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGC 92
F+Q + T+RGL Q+ P AQ L+ + G ++ + +D+RRNS ++
Sbjct: 31 TPFIQSDTQLQLWREPQARTLRGLRVQQAPAAQTLLLTPLTGMVWIMVLDLRRNSHSFCH 90
Query: 93 WVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITW 152
W +E+ A+ + IP G AHGF+TL +T ++ + G+ W D + W
Sbjct: 91 WYGVEMQASAAQSLCIPPGCAHGFLTLAADTLLLSMASVKDEPLLQRGIRWDDAQFGMAW 150
Query: 153 PLLDTILPSVSEKDQNLPFL 172
P +S+ D LP
Sbjct: 151 PYPPE---QLSDLDGGLPDF 167
>gi|330506722|ref|YP_004383150.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like protein [Methanosaeta
concilii GP-6]
gi|328927530|gb|AEB67332.1| dTDP-4-dehydrorhamnose 3,5-epimerase-related protein [Methanosaeta
concilii GP-6]
Length = 181
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 10/154 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I + F D RG+ ++ E Q S+S+ +G H
Sbjct: 29 IEGVVIKDMKLFSDERGFLTELIRLDD--EEMKASNIKQIIASYSYPGMI-KGWHLH--- 82
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + C+ G + D R +SPTY + + +YIP G HG + +
Sbjct: 83 SKQEDHLICVTGIVKVALYDYREDSPTYKFLNEIFMGEKCPRAVYIPPGVFHGTKNIGND 142
Query: 123 TEVIYKV-TDFYSVE--HDSGVAWQDKSI-DITW 152
V+ + + FY E + V D I W
Sbjct: 143 ISVVIGMPSLFYDPENVDERRVNPIDNDIVPYDW 176
>gi|326486449|gb|ADZ76277.1| putative nucleotide-sugar epimerase/dehydratase [Campylobacter
jejuni subsp. jejuni]
Length = 99
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 76 IFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV---TDF 132
+ + VD R++SPTY W IS N I +P + YK+ ++
Sbjct: 1 MHQVVVDCRKDSPTYLKWEKFIISPRNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEY 60
Query: 133 YSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKD 166
AW D+ I I WP T P +SE+D
Sbjct: 61 LDAPDQFTYAWNDERIAIDWP---TNSPILSERD 91
>gi|313117364|ref|YP_004044347.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme [Halogeometricum
borinquense DSM 11551]
gi|312294255|gb|ADQ68686.1| dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme [Halogeometricum
borinquense DSM 11551]
Length = 156
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 9/154 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI+ V + + D RG + + E + + ++ G +R H
Sbjct: 3 NIHDVEVRDLQVNADQRGHLVEVFREDW-DEYDIDPAMSYYSMTY---PGVVRAWHRH-- 56
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q C GRI D R++SPT G + I +N I IP HGF +
Sbjct: 57 LEGQIDHFVCPKGRITVGIYDDRQDSPTNGELDTFVIGEHNQQVIRIPGDCWHGFKAIGD 116
Query: 122 N-TEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+I T+ Y E + + + D I W
Sbjct: 117 EPAFLINYPTNLYDYEDPDEERIPYDDDRIPYDW 150
>gi|163955190|ref|YP_001648294.1| hypothetical protein OsV5_218f [Ostreococcus virus OsV5]
gi|163638639|gb|ABY27998.1| hypothetical protein OsV5_218f [Ostreococcus virus OsV5]
Length = 393
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 58/164 (35%), Gaps = 22/164 (13%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
F+D RG ++ Q + + +RGLH P K +
Sbjct: 4 FKDHRGEI--LFNIDE-----SPFEIKQCFSTLNEK-YVLRGLHCSPYP----KFITVNN 51
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFY 133
G+IFD+ V + G + I AHG+ E +E+IY + +
Sbjct: 52 GKIFDVIVKPDGT--------YDAYNLKKGDSLLIEPNCAHGYFCFEQ-SEIIYFLGGTF 102
Query: 134 SVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDS 177
++ W D ++I WP + VS KD N D+
Sbjct: 103 DASNEKNYLWNDPYLNIQWP-HEVKNAVVSMKDMNNQVFKIFDT 145
>gi|269837010|ref|YP_003319238.1| dTDP-4-dehydrorhamnose 3,5 epimerase [Sphaerobacter thermophilus
DSM 20745]
gi|269786273|gb|ACZ38416.1| dTDP-4-dehydrorhamnose 3,5 epimerase [Sphaerobacter thermophilus
DSM 20745]
Length = 151
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V + + D RG ++ ++ G Q S S G IRG H+
Sbjct: 2 IHGVEVKRLITHVDERGALTELIRRDDPFFEQFG------QCYVSVS-YPGVIRGWHYH- 53
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL- 119
Q C+ G I DIR +SPTYG I +N + + IP G HGF +
Sbjct: 54 --KKQTDYFTCVKGMIKVPLYDIREDSPTYGELNEFFIGDDNRIVVKIPAGVLHGFKNIG 111
Query: 120 EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPL 154
++ T+ Y+ + + + W I W +
Sbjct: 112 HEPCYLLNFPTEPYNPDDPDEYRIPWNSPDIPYNWDI 148
>gi|237752229|ref|ZP_04582709.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter winghamensis
ATCC BAA-430]
gi|229376471|gb|EEO26562.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Helicobacter winghamensis
ATCC BAA-430]
Length = 170
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
+ + I+ KF+D RG +YS + L + + +RG+H
Sbjct: 34 KLKGIYIITPNKFQDLRGEIWSSYSKDAIGHLLPNGLEFVLDKFTLSKPNVLRGIHGD-- 91
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ KLV CI G I+ + VD R++SPTY W I+++N I IP F +
Sbjct: 92 -HKSWKLVTCITGEIYQVVVDCRKDSPTYLKWEKFIINSDNQKLILIPPYFGNAQYVSSK 150
Query: 122 NTEVIYKVTDFYSVEH 137
+ +Y Y E+
Sbjct: 151 -CDSMYCYKLAYDGEY 165
>gi|302343718|ref|YP_003808247.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfarculus baarsii DSM
2075]
gi|301640331|gb|ADK85653.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfarculus baarsii DSM
2075]
Length = 153
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 11/153 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V + + D RG + + D F Q + + G ++ H
Sbjct: 4 ISGVHTKQLKVIPDERGRLMEILRRDD----EIFDGFGQV-YMTTTLPGVVKAWHLH--- 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE-M 121
Q V C+ G I D R +SPT G + + L + IP HG+ +
Sbjct: 56 KKQTDNVCCVFGMIRLGLFDDREDSPTRGVVNEFFMGMHRPLLVQIPPLVYHGWKCVSLE 115
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
++ VT+ Y + + D +I + W
Sbjct: 116 EALIVNTVTEPYDYKDPDEFRRDAHDPAIPLDW 148
>gi|24379857|ref|NP_721812.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans
UA159]
gi|24377830|gb|AAN59118.1|AE014978_9 putative dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans
UA159]
Length = 153
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 33 LGLQDVFV-----QDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS 87
LG + F Q+N SFS +RGLH + + G++ +D+R
Sbjct: 4 LGFPESFFAEGKLQNNVSFSRK-NVLRGLHAEPWDKY---ISIADEGKVLGSWIDLREGD 59
Query: 88 PTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS----VEHDSGVAW 143
+ ++ + I++P G A+GF L Y V D+++ ++ V +
Sbjct: 60 SFGHVYQAVI---DASKGIFVPRGVANGFQVLSDKVSYSYLVNDYWALELKPKYAF-VNY 115
Query: 144 QDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
D ++ I W + VSE D+N P L +
Sbjct: 116 ADPTLGIEW--ENLEEAQVSEADKNHPLLKDVK 146
>gi|84498712|ref|ZP_00997453.1| dihydrolipoamide dehydrogenase [Janibacter sp. HTCC2649]
gi|84381012|gb|EAP96900.1| dihydrolipoamide dehydrogenase [Janibacter sp. HTCC2649]
Length = 87
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFS 47
+ I ++ R+F D RG F +++ LL + G + +Q N S S
Sbjct: 6 LAIEGAFVVTPRQFPDDRGVFLESFRGDLLAQHLGHRPDIIQTNVSVS 53
>gi|292656184|ref|YP_003536081.1| spore coat polysaccharide synthesis spsK [Haloferax volcanii DS2]
gi|291370459|gb|ADE02686.1| spore coat polysaccharide synthesis spsK [Haloferax volcanii DS2]
Length = 156
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 11/155 (7%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
NI+ V + + D RG + + S E + + ++ G +R H
Sbjct: 3 NIHDVEVRDLQVNADQRGHLVEVFRSDW-DEYEIDPEMSYYSMTY---PGVVRAWHRH-- 56
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
Q C GRI D R +SPT G + I +N I IP HGF +
Sbjct: 57 LEGQIDHFVCPKGRITVGIYDDREDSPTQGELDTFVIGEHNQQVIRIPGDCWHGFKAIGD 116
Query: 122 NTEVIYKV----TDFYSVEHDSGVAWQDKSIDITW 152
++ D+ + + + + D I W
Sbjct: 117 EPSLLINYPTNLYDYEDPDEER-IPYDDDRIPYDW 150
>gi|73669392|ref|YP_305407.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina barkeri str.
Fusaro]
gi|72396554|gb|AAZ70827.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanosarcina barkeri str.
Fusaro]
Length = 181
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 55/154 (35%), Gaps = 10/154 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I + F D RG ++ E Q S+S+ +G H
Sbjct: 29 IEGVFIRDMKLFSDERGLLTEVIRLDD--ENLKAQNIKQIIASYSYPGMI-KGWHLH--- 82
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + C G + D R +SPTY + + IYIP G HG + +
Sbjct: 83 SKQEDHLFCATGMVKVALYDYREDSPTYKVINEIFMGEKYPRTIYIPPGIFHGTKNVGND 142
Query: 123 TEVIYKV-TDFYSVE--HDSGVAWQDKS-IDITW 152
V+ + + FY+ E + V D I W
Sbjct: 143 ISVVIGMPSLFYNPEDVDERRVNPIDNDIIPYDW 176
>gi|83309223|ref|YP_419487.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Magnetospirillum magneticum AMB-1]
gi|82944064|dbj|BAE48928.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Magnetospirillum magneticum AMB-1]
Length = 169
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 13/159 (8%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I+ + I+ RK D RG + + G + + + G I+ H
Sbjct: 21 KIHGLNIIPLRKIPDERGTIMHMLRADAPHFDKFG-------EVYFATAYPGVIKAWHLH 73
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
QA+ CI G I + D R +SPT G + + N + + IP +G+ +
Sbjct: 74 ---TKQAQNYCCIQGMIKLVCYDDRADSPTKGVLQEIVMGDLNYVLVQIPPLLINGWKCI 130
Query: 120 EMNTEVIYKVTD-FYSVEHDSGVAWQDKSIDITWPLLDT 157
T ++ D + + D +I W L
Sbjct: 131 GTQTALLANCADMPHDPTEMKRIDPFDPAIPYDWALKHG 169
>gi|126178136|ref|YP_001046101.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanoculleus marisnigri
JR1]
gi|125860930|gb|ABN56119.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Methanoculleus marisnigri
JR1]
Length = 158
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 56/162 (34%), Gaps = 15/162 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V I R D RGW + + ++ G + + G ++ H+
Sbjct: 5 IDGVAIKNLRLIPDERGWLMEILRCDDAIFEKFG-------QVYCTTAYPGVVKAWHYH- 56
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL- 119
Q C+ G + D R +SPT G + + N + I +P G HGF +
Sbjct: 57 --KKQTDNFTCVHGMMKVALYDAREDSPTRGNLMEFFVGEKNPILISVPPGVYHGFKGIG 114
Query: 120 EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLLDTIL 159
+ T YS + + + I W L +
Sbjct: 115 TETAFFVSIPTLPYSYDDPDEFRLPPDTNEIPYDWGLTPGLK 156
>gi|282163187|ref|YP_003355572.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Methanocella
paludicola SANAE]
gi|282155501|dbj|BAI60589.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Methanocella
paludicola SANAE]
Length = 159
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 52/161 (32%), Gaps = 15/161 (9%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
+I+ V + R D RG + + G + S G ++G H+
Sbjct: 5 SIDGVMTRQLRLNVDERGSLMEVMRPDWDVFERFG-------QVYVTSAYPGVVKGWHYH 57
Query: 60 RPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
Q C+ G + D R NSPT G I N L + IP HGF +
Sbjct: 58 ---KKQYDNFVCVRGMMKVALFDSRDNSPTKGLLNEFFIGERNPLLVKIPPYVYHGFKCI 114
Query: 120 -EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLLDT 157
++ T Y + + K I W L
Sbjct: 115 GTNEALIVNVPTGLYDYNEPDEYRLPPDTKEIPYDWGLTPG 155
>gi|226357059|ref|YP_002786799.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Deinococcus deserti VCD115]
gi|226319049|gb|ACO47045.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Deinococcus deserti
VCD115]
Length = 179
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 2/144 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I RK G F + GL S S+
Sbjct: 24 IEGVWIQPLRKNRSENGAFMEYLRINEQGIQGLPGPLSPRQISVSWAAPGRVNAFHIHVK 83
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q ++ I G++ VD R S T G L +S ++IP+G AHG+ E
Sbjct: 84 TVQNEIWCVIQGQLMVWLVDCRAGSSTLGVRRKLVLSGEQPTMVHIPSGVAHGYQASEEG 143
Query: 123 TEVIYKVTDFYSVEH--DSGVAWQ 144
++Y + + ++ + +AW
Sbjct: 144 ATLLYSMDAQFDLDDPNEGRIAWN 167
>gi|257387271|ref|YP_003177044.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Halomicrobium mukohataei DSM 12286]
gi|257169578|gb|ACV47337.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Halomicrobium mukohataei DSM 12286]
Length = 154
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 9/153 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V + + D RG + Y + D Q ++ G R H
Sbjct: 2 ISGVTLRDLQTNTDERGHLVEVYREDWDE----YDPSPQMSYYSMTYPGVTRAWHKHH-- 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ Q C GRI D R +SP+ G + I +N I IP HGF +
Sbjct: 56 HGQIDHFVCPKGRIKVGVYDDREDSPSQGELDTFVIGEHNQKVIRIPGECWHGFKAIGDE 115
Query: 123 -TEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+I + Y E + + + I + W
Sbjct: 116 PAFLINFPSKLYDYENPDEERLPYDTDKIPLDW 148
>gi|78043500|ref|YP_359824.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995615|gb|ABB14514.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 158
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 6/130 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I V I +K D RGW + + ++E + ++ G +RG H +
Sbjct: 7 EIEGVIIRPLKKHIDERGWLCELFRQDEIEETIMPV----MSYISQTLPGIVRGPHEHKE 62
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+ G D RR+S TYG + +N I +P G H + +
Sbjct: 63 QTDYFAFIGP--GNFKIYLWDNRRDSSTYGNRQIIYAGEDNPAVIIVPPGVVHAYKNVST 120
Query: 122 NTEVIYKVTD 131
+++ +
Sbjct: 121 KPGLVFNSPN 130
>gi|323701364|ref|ZP_08113038.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfotomaculum nigrificans
DSM 574]
gi|323533623|gb|EGB23488.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Desulfotomaculum nigrificans
DSM 574]
Length = 153
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 11/158 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V++ K R D RG+ + + + + G + H+ +
Sbjct: 4 ISGVQVKKLRLIPDERGYLMEMLRCDW-----PEFESFAQAYVTACYAGVYKAWHYHKL- 57
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM- 121
Q C++G + D R SPT G I N + + IP HGF
Sbjct: 58 --QTDHFVCVSGMAKVVLFDDREESPTRGEINEFHIGQLNPVLLKIPPLVYHGFTAEGNA 115
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLLDT 157
+I T Y+ + + + D +I W +
Sbjct: 116 PALIINFPTQLYNYQQPDEYRRPYNDPAIPYNWEVKHG 153
>gi|20090758|ref|NP_616833.1| hypothetical protein MA1909 [Methanosarcina acetivorans C2A]
gi|19915817|gb|AAM05313.1| hypothetical protein MA_1909 [Methanosarcina acetivorans C2A]
Length = 181
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 19/161 (11%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V + T+ F D RG+ ++ E Q S+S+ +G H
Sbjct: 29 IEGVVVKDTKLFSDERGFLTELIRLDD--EDMKAQDIKQIIASYSYPGMI-KGWHLH--- 82
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + C++G + + D R +SPTY + + +YIP G HG + +
Sbjct: 83 SKQEDHLFCVSGMVKVVLYDYREDSPTYKVLNEIFMGDRYPRTVYIPPGIFHGTKNVGND 142
Query: 123 TEVIYKV-TDFYSVE--HDSGVAWQDKSIDITWPLLDTILP 160
V+ + + Y E + V P+ + I+P
Sbjct: 143 VSVVIGMPSLLYDPEDVDERRVN----------PISNNIIP 173
>gi|218459038|ref|ZP_03499129.1| dTDP-4-dehydrorhamnose 3,5-epimerase protein [Rhizobium etli Kim
5]
Length = 53
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFS 47
I + + +F D RG+FS+ + +E +FVQ++ S S
Sbjct: 8 IQGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVMFVQEHESLS 52
>gi|11500016|ref|NP_071261.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
[Archaeoglobus fulgidus DSM 4304]
Length = 165
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 14/149 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ + + + F D RG+F++ +D +Q N S + G +R H
Sbjct: 2 LPGIVVKPLKTFADERGFFTEIMRRDW---DVFEDEILQANMSVT-YPGIVRAWHKHERG 57
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE-M 121
+ A+ I + + N + +P + HGF +
Sbjct: 58 -------QVDYFVCIGGAIKICAYDDETQELAEIVSTGKNLQVVRVPGHYWHGFKAIGVE 110
Query: 122 NTEVIYKVTDFYSVE--HDSGVAWQDKSI 148
++Y V+ Y E + W D +I
Sbjct: 111 PAVLVYFVSRLYDYENPDEVRRPWNDSTI 139
>gi|300856928|ref|YP_003781912.1| dTDP-4-dehydrorhamnose 3,5 epimerase [Clostridium ljungdahlii DSM
13528]
gi|300437043|gb|ADK16810.1| dTDP-4-dehydrorhamnose 3,5 epimerase [Clostridium ljungdahlii DSM
13528]
Length = 171
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 9/153 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+ + + + D RG + + + LG + F Q S G ++G H
Sbjct: 20 IEGVKYKRLKVYPDERGSLIEIFRNDDEDFLGGK--FGQLITSI-CYPGVVKGWHIHSV- 75
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q + I+G + D R NSPT G + N L I IP G HG +
Sbjct: 76 --QVDRLAVISGMAKIVLYDARENSPTKGEINEFFVGERNPLFILIPPGVYHGLKAIGTQ 133
Query: 123 TEVIYKVTDF---YSVEHDSGVAWQDKSIDITW 152
+ + Y + V + I W
Sbjct: 134 PSITLGLPTELYKYDEPDEFRVHPHNDEIPYNW 166
>gi|15807713|ref|NP_285367.1| lipopolysaccharide biosynthesis protein [Deinococcus radiodurans
R1]
gi|6460560|gb|AAF12266.1|AE001862_92 lipopolysaccharide biosynthesis protein, putative [Deinococcus
radiodurans R1]
Length = 182
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 2/144 (1%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V +K G F + L V S S+
Sbjct: 27 IEGVWFHSLKKNRSENGAFMEYVRLDENGVQNLPGQLVPRQISVSWAAPKRINAFHIHVK 86
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q ++ + G++ VD R SPT G L S + ++IP+G AHG+ E
Sbjct: 87 EEQNEIWCVLQGQLTIWLVDCRAGSPTVGVKRKLVFSGEQPMMVHIPSGVAHGYQAGENG 146
Query: 123 TEVIYKVTDFYSVEH--DSGVAWQ 144
++Y + +++E + + W
Sbjct: 147 ATLLYTMDAQFNIEDPNEGRLPWN 170
>gi|221632270|ref|YP_002521491.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermomicrobium roseum DSM
5159]
gi|221156733|gb|ACM05860.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Thermomicrobium roseum DSM
5159]
Length = 151
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 15/158 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V I + D RG ++ ++ G Q S S G IR H+
Sbjct: 2 IHGVEIKRLVTHVDERGSLTELIRCDDPFFEKFG------QCYVSVS-WPGVIRAWHWH- 53
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL- 119
Q CI G I D+R SPTY + +N + + IP G AHGF +
Sbjct: 54 --KKQTDYFVCIRGMIKVPLFDLRPESPTYRELNEFFLGDDNRIVLKIPPGVAHGFKNIG 111
Query: 120 EMNTEVIYKVTDFYSVE--HDSGVAWQDKSIDITWPLL 155
++ T+ Y + + + + I +W +
Sbjct: 112 TEPCYLLNFPTEPYDADDPDEYRLPYDTPEIPYSWEIK 149
>gi|147677414|ref|YP_001211629.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Pelotomaculum thermopropionicum SI]
gi|146273511|dbj|BAF59260.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Pelotomaculum thermopropionicum SI]
Length = 147
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 11/145 (7%)
Query: 11 TRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVR 70
+ D RG+ + S + + + + G I+ H+ + Q
Sbjct: 6 LKVIPDERGFLMEMLRSDW-----PEFMNFAQAYVTACYPGVIKAWHYHKL---QWDHFV 57
Query: 71 CIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE-VIYKV 129
C+AG + D R S T G + N + + IP HGF T ++
Sbjct: 58 CVAGMARTVLYDPREGSSTKGKVNVFHLGYLNPVLLKIPPMVYHGFAAEGDKTSLIVNFP 117
Query: 130 TDFYSVE--HDSGVAWQDKSIDITW 152
T Y+ + + + D SI W
Sbjct: 118 TRLYNYGQPDEFRLPYDDPSIPYRW 142
>gi|268316910|ref|YP_003290629.1| dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like
protein [Rhodothermus marinus DSM 4252]
gi|262334444|gb|ACY48241.1| dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like
protein [Rhodothermus marinus DSM 4252]
Length = 157
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I +++ED+RGW ++ + L V+ + G RG H
Sbjct: 8 IEGVVIRPLKRYEDARGWLAEFFRQDELD----PSVYPVMGYVSLTHPGITRGPH---EH 60
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q L G + D R +SPTY L++ + + +P G H + +
Sbjct: 61 REQTDLFVFFHGHLRLYLWDARPDSPTYSHRQVLDVGEAHPVTALVPPGVVHAYRNVGHT 120
Query: 123 TEVIYKVTD 131
++ +
Sbjct: 121 PALLINCPN 129
>gi|307826092|ref|ZP_07656304.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Methylobacter
tundripaludum SV96]
gi|307732830|gb|EFO03695.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Methylobacter
tundripaludum SV96]
Length = 41
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 137 HDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQID 176
+ +AW D SI I WP+ P++S KDQ L +
Sbjct: 1 FERSIAWNDPSIGIHWPIQGE--PALSAKDQLGKSLVDAE 38
>gi|295695520|ref|YP_003588758.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus tusciae DSM
2912]
gi|295411122|gb|ADG05614.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus tusciae DSM
2912]
Length = 188
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 6/146 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFD-CGTIRGLHFQRP 61
I V+IL R F D G F++ L + F ++S G ++ H
Sbjct: 33 IEGVQILDLRWFTDDGGAFTELARLDEQGCLAVLPEFQVRQVNYSVVLPGAVKAWHLHFN 92
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-E 120
R+ +D+R +SPTY + + A +YIP G AHG +
Sbjct: 93 QEDV--WFIPPTVRLLVGLLDVRASSPTYRNTMRFVMGAGKAQVLYIPRGVAHGVANIWA 150
Query: 121 MNTEVIYKVTDFYSVE--HDSGVAWQ 144
+ ++Y V + E ++ + W
Sbjct: 151 QDAYMMYLVNQQFDPEKPDENRLPWD 176
>gi|289522631|ref|ZP_06439485.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504467|gb|EFD25631.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 159
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 6/121 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I K K D RG+ +T+ L E ++ + G RG H +
Sbjct: 8 IEGVLIKKLVKHVDERGFLVETFRIDELPENLRPL----MSYVSYTEPGITRGPHEHKAQ 63
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ G D RR+S TYG ++ +N L + +P G HG+ +
Sbjct: 64 TDIFSFIGP--GNFMVKLWDNRRDSKTYGNYMKFFAGEDNPLTVVVPPGVVHGYKNVSKT 121
Query: 123 T 123
Sbjct: 122 A 122
>gi|84498717|ref|ZP_00997458.1| hypothetical protein JNB_00060 [Janibacter sp. HTCC2649]
gi|84381017|gb|EAP96905.1| hypothetical protein JNB_00060 [Janibacter sp. HTCC2649]
Length = 41
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQ 36
+ I ++ R+F D RG F +++ LL +
Sbjct: 6 LAIEGAFVVTPRQFPDDRGVFLESFRGDLLAQHLGH 41
>gi|254456484|ref|ZP_05069913.1| polysaccharide biosynthesis domain protein [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083486|gb|EDZ60912.1| polysaccharide biosynthesis domain protein [Candidatus Pelagibacter
sp. HTCC7211]
Length = 149
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 9/154 (5%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I+ ++ D RG + F + S+S
Sbjct: 2 IEGVKIIPKKQIIDERGKIMHMMRNDDPN----FTKFGEIYFSYSHPNTVKAW----HLH 53
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
C+ G+I + D R S T G + ++ N + +P +GF ++E
Sbjct: 54 KRMTVNYVCVIGKIKLVLFDDRPESSTKGELQEIFLTTENYSLVTVPARVWNGFKSVENK 113
Query: 123 TEVIYKVTDFYSVEHDSGVA-WQDKSIDITWPLL 155
+I +D + + D + W +
Sbjct: 114 FSIIANCSDIPHEAEEMSRKPFDDPYFNYNWNIK 147
>gi|257053209|ref|YP_003131042.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Halorhabdus utahensis DSM
12940]
gi|256691972|gb|ACV12309.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Halorhabdus utahensis DSM
12940]
Length = 155
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 7/153 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V + + D RG ++ + S G + ++ G +R H
Sbjct: 2 IHDVELRALQINADERGTLTEIWRSDWDFFAG--EDEPTMSYLSESYPGVVRAWHRH--E 57
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q G + D R +SPT G + I +N I +P HGF +
Sbjct: 58 RGQIDHFVVPHGNVKVGIYDDREDSPTQGELDTYVIGEDNPTAIRVPGECWHGFKVIGDE 117
Query: 123 -TEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+I T+ Y E + + I + W
Sbjct: 118 RATLINFPTNLYDYEDPDEQRLPPDTDEIPLDW 150
>gi|90417249|ref|ZP_01225176.1| dTDP-4-dehydrorhamnose epimerase [marine gamma proteobacterium
HTCC2207]
gi|90331025|gb|EAS46286.1| dTDP-4-dehydrorhamnose epimerase [marine gamma proteobacterium
HTCC2207]
Length = 152
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 13/157 (8%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V + R+F D RG ++ G + + ++ H
Sbjct: 5 IDGVLLSPLRQFFDERGKVMHMLREDDDHFEKFG-------EIYFSCTFPDVVKAWHKH- 56
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
C++G + + D R +S T+G + +S N + +P +GF +
Sbjct: 57 --SEMKLNYACVSGSVKVVLYDTRESSETFGRFNEFILSPENYYLLTVPPMVWNGFKAIG 114
Query: 121 MNTEVIYKVTDFYSVEHDSG-VAWQDKSIDITWPLLD 156
+ ++ +++ I+ W +
Sbjct: 115 TQMATVANCATIAHRSNEITRLSYDASEINYDWNIKH 151
>gi|110592087|gb|ABG77518.1| RfbC [Rhizobium leguminosarum bv. trifolii TA1]
Length = 166
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 4 NPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
+ +++ D RG F++T+ ++ GL V+ Q N S + + GT+RG+H+Q P
Sbjct: 89 SGAFVVEIDARSDDRGMFARTFDAQTSAAQGLVPVYPQCNVSQNRERGTLRGMHYQAQPR 148
Query: 64 AQAKLVRC 71
+
Sbjct: 149 PEGSWCAP 156
>gi|301165718|emb|CBW25290.1| dTDP-D-glucose 4,6-dehydratase [Bacteriovorax marinus SJ]
Length = 145
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 13/153 (8%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V+I + D RG S + G + F N+ I+ H+
Sbjct: 2 IEGVKITPLKTIADDRGKIMHMLRSDAEHFSKFG-EVYFSFVNNG------VIKAWHYH- 53
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
G+I + D R S T+G + +S + + +P +GF L
Sbjct: 54 --KEMTINYAVPVGKIDFVLYDSREESSTFGETQVITMSPEDYFLVTVPPRVWNGFKGLS 111
Query: 121 MNTEVIYKVTDFYSVEHDS-GVAWQDKSIDITW 152
++ TD + + + I W
Sbjct: 112 TEPAMVVNCTDIPHRGDEIERLDFNTDKIPFKW 144
>gi|148508210|gb|ABQ75998.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme [uncultured
haloarchaeon]
Length = 156
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 7/153 (4%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V + +K D RG ++ + S G + + ++ G IR H
Sbjct: 2 IHDVEVRSLQKNVDERGQLTEIWRSDWDFYAGDDEP--KMSYFSETHPGIIRAWHRHHR- 58
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
Q G+ D R SPT G + + N I +P HGF +
Sbjct: 59 -GQIDHFVVPRGKAKVGIYDDREESPTQGEVDTYIVGEGNANAIRVPGDCWHGFKAVGDE 117
Query: 123 -TEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
++ T+ Y + + + + +I + W
Sbjct: 118 RVLLLNFPTNLYDYDDPDEERIPYDTDTIPLDW 150
>gi|315926854|gb|EFV06226.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 109
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++ + L +L + + + + +RG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTDEYLSKLVPDGIKFKHDKFINSHFNVLRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEIS 99
KLV C+ G + + VD R++SP + + +
Sbjct: 70 VKTYKLVTCVYGEVHQVVVDCRKDSPNFILKMGRKFY 106
>gi|57790391|gb|AAW56125.1| Cj81-046 [Campylobacter jejuni subsp. jejuni 81-176]
Length = 106
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
+ V I+ KF D RG ++SK + +L + + IRG+H
Sbjct: 13 LKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGD--- 69
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEIS 99
KL C+ G I + VD R++SPTY + I+
Sbjct: 70 VKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIIN 106
>gi|154415789|ref|XP_001580918.1| dTDP-D-glucose 4,6-dehydratase [Trichomonas vaginalis G3]
gi|121915141|gb|EAY19932.1| dTDP-D-glucose 4,6-dehydratase, putative [Trichomonas vaginalis G3]
Length = 458
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 54/153 (35%), Gaps = 16/153 (10%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ I V + + + D RG + + L+ F + + ++
Sbjct: 12 LKIEGVDSIDSPVYPDHRGTLYEAF-------HCLKADFDCSVAAVNSFYPRRHVVYGLI 64
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++ I G++ + +D + + + A G I IP+G G++ LE
Sbjct: 65 SIDGD-EIFHVIRGKLIVVLIDPKDHKL------HEIVEAGPGKVIKIPSGVIRGYLALE 117
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWP 153
+ VIY + + + + D + WP
Sbjct: 118 ED--VIYNIVRTSGNGNKTCYKFDDPEFGVKWP 148
>gi|258593513|emb|CBE69852.1| Spore coat polysaccharide biosynthesis protein spsL [NC10 bacterium
'Dutch sediment']
Length = 153
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 15/155 (9%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I+ V+ R+ D RG+ ++ S + G + + G ++G H+
Sbjct: 4 IDGVQTRLLRRVPDERGFLTELLRSDWEEFERFG-------QAYITAAYPGVVKGWHYH- 55
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
Q + G + D R NSPT G I N + IP HG+ +
Sbjct: 56 --KKQTDHFAGVLGMSKVVLFDPRDNSPTKGLINEFFIGEQNPTLVKIPPLVIHGYKPVG 113
Query: 121 M-NTEVIYKVTDFYSVE--HDSGVAWQDKSIDITW 152
+ ++ T+ Y+ + + + I W
Sbjct: 114 DRMSAIVNFPTELYNYQEPDEFRIPHDSPDIPYDW 148
>gi|197118840|ref|YP_002139267.1| nucleoside diphosphate-sugar dehydratase [Geobacter bemidjiensis
Bem]
gi|197088200|gb|ACH39471.1| nucleoside diphosphate-sugar dehydratase, putative [Geobacter
bemidjiensis Bem]
Length = 162
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 22/144 (15%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V + KF D RGW + + S L++ L + G RG H
Sbjct: 12 IHDVVLKPLGKFLDERGWLCELFRSDELEQSVLPAMTYVSM----TQPGVTRGPH--EHV 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
D R +SP+ G + + L + +P G H
Sbjct: 66 DQTDYFCFMGPSNFKVYLWDTRPDSPSRGVRQVVYAGLDAPLAMIVPPGVVHA------- 118
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDK 146
+ +V ++G+ +
Sbjct: 119 ---------YRNVGTENGIVFNAP 133
>gi|253700377|ref|YP_003021566.1| dTDP-4-dehydrorhamnose 3 5-epimerase [Geobacter sp. M21]
gi|251775227|gb|ACT17808.1| dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like
protein [Geobacter sp. M21]
Length = 162
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 22/144 (15%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I+ V + KF D RGW + + S L+ L + G RG H
Sbjct: 12 IHDVVLKPLGKFLDERGWLCELFRSDELEPSVLPAMTYVSM----TQPGVTRGPH--EHV 65
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
D R +SP+ G + + + + +P G AH
Sbjct: 66 EQTDYFCFMGPSNFKVYLWDTRPDSPSRGVRQVVYAGLDAPMAMIVPPGVAHA------- 118
Query: 123 TEVIYKVTDFYSVEHDSGVAWQDK 146
+ +V ++G+ +
Sbjct: 119 ---------YRNVGCENGIVFNAP 133
>gi|222056562|ref|YP_002538924.1| dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like
protein [Geobacter sp. FRC-32]
gi|221565851|gb|ACM21823.1| dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like
protein [Geobacter sp. FRC-32]
Length = 158
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V + K+ D RGW ++ Y S + E + + G RG H
Sbjct: 7 KIHDVLVRPLTKYLDERGWLAELYRSDEIAEEIMPVMAYISM----TQPGVARGPH--EH 60
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
D R+NSPTYG + + + + +P G H +
Sbjct: 61 VDQTDYFCFIGPSNFKIYLWDNRKNSPTYGVKQVIFAGQDVPMMMTVPPGVVHAYKN 117
>gi|120555508|ref|YP_959859.1| dTDP-4-dehydrorhamnose 3,5-epimerase related [Marinobacter
aquaeolei VT8]
gi|120325357|gb|ABM19672.1| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Marinobacter
aquaeolei VT8]
Length = 115
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 69 VRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYK 128
+R GR+ D+ D NSP +G WV +S +++ G GF+ + + YK
Sbjct: 1 MRVTLGRVSDVFADQCTNSPIFGRWVGKYLSEVKKRMLWVSVGGGRGFLVISDTADFQYK 60
Query: 129 VTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
T+F+ H+ + W ++++ + + KD + L Q
Sbjct: 61 CTNFFGPMHECCICWCYPALNLNLSEATSEDVQLWGKDNEVQSLEQ 106
>gi|213585952|ref|ZP_03367778.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 72
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 3 INPVRILKTRKFEDSRGWFSQ 23
I V IL+ + F D RG+F +
Sbjct: 8 IPDVLILEPKVFGDERGFFLK 28
>gi|148264901|ref|YP_001231607.1| dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like
protein [Geobacter uraniireducens Rf4]
gi|146398401|gb|ABQ27034.1| dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like
protein [Geobacter uraniireducens Rf4]
Length = 162
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V + K+ D RGW ++ + + L + G+ V + + G RG H
Sbjct: 11 KIHDVIVKPLGKYLDERGWLAELFRADEL-DAGIMPVMAYISMT---QPGVARGPH--EH 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
D R++SPTYG + + + + +P G H +
Sbjct: 65 VEQTDYFCFIGPSNFKVYLWDRRKDSPTYGVKQVVYTGVDLPMMMVVPPGVVHAYKN 121
>gi|322419833|ref|YP_004199056.1| dTDP-4-dehydrorhamnose 35-epimerase-like protein [Geobacter sp.
M18]
gi|320126220|gb|ADW13780.1| dTDP-4-dehydrorhamnose 35-epimerase related protein [Geobacter sp.
M18]
Length = 162
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 38/127 (29%), Gaps = 8/127 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQRP 61
I+ V KF D RGW ++ + + L S RG H
Sbjct: 12 IHDVVCKPLTKFLDERGWLTELFRNDE-----LDPDIAPVMSYISMTQPGVARGPH--EH 64
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
D R SPT+G + + + +P G H + + M
Sbjct: 65 LDQTDYFCFLGPSNFKVYLWDARPGSPTFGVKQVVYAGVDAPTMMVVPPGVVHAYRNIGM 124
Query: 122 NTEVIYK 128
+++
Sbjct: 125 ENGIVFN 131
>gi|258591669|emb|CBE67970.1| dTDP-4-dehydrorhamnose 3,5-epimerase [NC10 bacterium 'Dutch
sediment']
Length = 174
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 57/160 (35%), Gaps = 19/160 (11%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL-LKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ VRI D RG + Y+S E V + + I+G
Sbjct: 23 IHDVRIRSAVTHPDERGTICEIYNSAWDFSEA-----PVVYVYQVTVRPQRIKGW---VV 74
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-E 120
Y Q V G + + D R+ SPT+G L IS +N ++IP G H +
Sbjct: 75 HYQQDDRVFVSQGVLKIVMYDPRKESPTHGMLNELCISEHNRGLLFIPRGVYHALQNVGT 134
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP 160
+ I T Y+ D PL + ++P
Sbjct: 135 TDALFINMPTRAYNHA--------DPD-KYRLPLNNDLIP 165
>gi|39997180|ref|NP_953131.1| hypothetical protein GSU2082 [Geobacter sulfurreducens PCA]
gi|39984070|gb|AAR35458.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506193|gb|ADI84916.1| nucleoside diphosphate-sugar dehydratase, putative [Geobacter
sulfurreducens KN400]
Length = 162
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 6/117 (5%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V + KF D RGW ++ + S + G RG H
Sbjct: 11 KIHDVVVKPLGKFLDERGWLAELFRSDE----TDPATMPVMAYVSMTRPGIARGPHEHVD 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
D R +SPT+G +L + + + +P G H +
Sbjct: 67 QTDW--FCFIGPSNFKVYLWDSRPDSPTHGVKQTLFAGIDAPMSVIVPPGVVHAYKN 121
>gi|50429172|gb|AAT77171.1| FdtA [Escherichia coli]
Length = 130
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 12/131 (9%), Positives = 33/131 (25%), Gaps = 20/131 (15%)
Query: 9 LKTRKFEDSRGWF--SQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQA 66
L + F D RG ++ + + + ++ RG H +
Sbjct: 4 LNLKVFGDERGSLISFES-------NKNIPFEIKRVYYIYATREKISRGFHAHKKLK--- 53
Query: 67 KLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI 126
++ G + + + I + + ++
Sbjct: 54 --------QVVVAVHGSCDFCVDNGLVRNTYHLNSPSQALLIDSLCWREMHNFSEDCVLM 105
Query: 127 YKVTDFYSVEH 137
+D+Y +
Sbjct: 106 VLASDYYDPDD 116
>gi|78222145|ref|YP_383892.1| hypothetical protein Gmet_0925 [Geobacter metallireducens GS-15]
gi|78193400|gb|ABB31167.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length = 162
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 6/127 (4%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRP 61
I+ V + KF D RGW ++ + S + + G RG H
Sbjct: 11 KIHDVAVRPLTKFLDERGWLAELFRSDETDAATMPA----MAYLSMTQPGVARGPHEHVD 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
D R S T+G ++ + L + +P G H + +
Sbjct: 67 QTDW--FCFIGPSNFKVYLWDARPTSATFGVKQTIYAGIDAPLAMIVPPGVVHAYKNVGG 124
Query: 122 NTEVIYK 128
+++
Sbjct: 125 ENGIVFN 131
>gi|282851769|ref|ZP_06261132.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus
gasseri 224-1]
gi|282557011|gb|EFB62610.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Lactobacillus
gasseri 224-1]
Length = 83
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 22 SQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAV 81
+T++ + + + G FVQDN S S G +RGLHFQ Y Q KLVR + G +FD+AV
Sbjct: 1 METFNQRDMMDAGFSINFVQDNQS-SSTKGVLRGLHFQ-KKYPQIKLVRAVRGSVFDVAV 58
Query: 82 DIRRNSPTYGCWVSLEISANNGLQI 106
D+R S TYG W +E++A N
Sbjct: 59 DLRSESKTYGKWYGVELTAENKNNS 83
>gi|238760639|ref|ZP_04621766.1| NDP-hexose isomerase [Yersinia aldovae ATCC 35236]
gi|238701150|gb|EEP93740.1| NDP-hexose isomerase [Yersinia aldovae ATCC 35236]
Length = 134
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 34/134 (25%), Gaps = 18/134 (13%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
V++++ +K D RG L+E + + + F RG H
Sbjct: 2 DVKLIQLQKHGDERGQLV------ALEETKNIPFSIKRVYYMFETINDVHRGFHAHYKLQ 55
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
++ R G N + I H +
Sbjct: 56 -----------QLAIPVRGACRIILDDGFEKIEVYLDNPAQGLAIEPMIWHEMYDFSDDC 104
Query: 124 EVIYKVTDFYSVEH 137
++ DFY
Sbjct: 105 VLMVLADDFYDEND 118
>gi|168701093|ref|ZP_02733370.1| hypothetical protein GobsU_16317 [Gemmata obscuriglobus UQM 2246]
Length = 164
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 8/120 (6%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCG-TIRGLHFQRP 61
I+ V + + F D RGW + + + L + F S RG H
Sbjct: 14 IHDVAWIPLKFFTDPRGWLVELFRNDL-----VPPAFHPVMAYVSMTKPGVARGPH--EH 66
Query: 62 PYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
D R+ SPT+G E+ + +P+G HG+ +
Sbjct: 67 VDQADYFCFTGPSTFRVCLWDARKTSPTFGQKEVREVGEGEPFALIVPSGVVHGYKNVGD 126
>gi|154413162|ref|XP_001579612.1| dTDP-D-glucose 4,6-dehydratase [Trichomonas vaginalis G3]
gi|121913820|gb|EAY18626.1| dTDP-D-glucose 4,6-dehydratase, putative [Trichomonas vaginalis G3]
Length = 450
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 18/165 (10%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + +I+K+ + D RG +++ L+ + + L+
Sbjct: 15 LEVPGAQIIKSPVYGDIRGNLYESF-------HILKVDYTTSIDEINGIYPGKNTLYGPV 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+ +L+ I G++ VD +S I G+ I IP H F +L+
Sbjct: 68 AHKGE-ELLYLIRGKLLVYLVDFNDHSKRAR------IEVEPGMIIRIPCMCIHAFYSLD 120
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEK 165
T T + E ++ + + + +P P + K
Sbjct: 121 ETTIFDLVKTTSHVEES----HFKPEELGLEFPGPVVQAPHIDNK 161
>gi|126741035|ref|ZP_01756717.1| hypothetical protein RSK20926_00952 [Roseobacter sp. SK209-2-6]
gi|126717799|gb|EBA14519.1| hypothetical protein RSK20926_00952 [Roseobacter sp. SK209-2-6]
Length = 48
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFV 40
+ + V + + ED+RG F + K+L E GL +V
Sbjct: 9 LPLPGVFHYQPQLHEDNRGSFGPSLLRKMLDEAGLNSTWV 48
>gi|238791478|ref|ZP_04635116.1| NDP-hexose isomerase [Yersinia intermedia ATCC 29909]
gi|238729094|gb|EEQ20610.1| NDP-hexose isomerase [Yersinia intermedia ATCC 29909]
Length = 134
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 34/134 (25%), Gaps = 18/134 (13%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIRGLHFQRPPY 63
V++++ +K D RG L+E + + + F RG H
Sbjct: 2 DVKLIQLQKHGDERGQLI------ALEETKNIPFSIKRVYYMFETINDVHRGFHAHYKLQ 55
Query: 64 AQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT 123
++ R G N + I H +
Sbjct: 56 -----------QLAIPVRGACRIILDDGFEKIEVYLDNPAQGLAIEPMIWHEMYDFSDDC 104
Query: 124 EVIYKVTDFYSVEH 137
++ DFY
Sbjct: 105 VLMVLADDFYDEAD 118
>gi|322412001|gb|EFY02909.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 55
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 13/38 (34%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF 39
I + D+RGWF + + + L F
Sbjct: 17 EIPGLLEFDIPVRGDNRGWFKENFQKEKNAANWLSRTF 54
>gi|23016868|ref|ZP_00056620.1| COG1898: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
[Magnetospirillum magnetotacticum MS-1]
Length = 161
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 13/158 (8%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
I V + R+ D RG E G + + S G ++ H
Sbjct: 14 IEGVTVTPMRRICDERGKIMHLMKKTDPQFTEFG-------EVYISSGYPGIVKAWHIH- 65
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
CI G + + D R SPT G + + +N +Q+ IP G ++G+
Sbjct: 66 --KEMTLNNTCIVGMMKLVLFDGRDGSPTKGNLMECFMGEDNYIQVKIPPGISNGYKAYG 123
Query: 121 MN-TEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDT 157
++ + + + + I W +
Sbjct: 124 DKLAMLVNCASMPHDPNELIYIDPFNNDIPYNWDVKHG 161
>gi|225025751|ref|ZP_03714943.1| hypothetical protein EIKCOROL_02655 [Eikenella corrodens ATCC
23834]
gi|224941532|gb|EEG22741.1| hypothetical protein EIKCOROL_02655 [Eikenella corrodens ATCC
23834]
Length = 74
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 10 KTRKFEDSRGWFSQTYSSK 28
+ + D RG+F +T+
Sbjct: 56 QPQVHGDERGFFMETFRDN 74
>gi|189092404|gb|ACD75804.1| putative dTDP-6-deoxy-3,4-keto-hexulose isomerase [Escherichia
coli]
gi|288816212|gb|ADC54935.1| FdtA [Escherichia coli]
gi|315285655|gb|EFU45097.1| WxcM-like protein [Escherichia coli MS 110-3]
gi|323956208|gb|EGB51959.1| WxcM protein [Escherichia coli H263]
Length = 137
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 17/141 (12%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++++ +K D RG L ++ + + + G RG H +
Sbjct: 3 DIKLISLQKHGDERGALI-----ALEEQRNIPFEVKRIYYILETLNGVRRGFHAHKVTRQ 57
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
A +V+ + G + + + I H +
Sbjct: 58 LAIVVK-----------GACKFHLDNGKETKQVELNDPTIALLIEPYIWHEMYDFSDDCV 106
Query: 125 VIYKVTDFYSVEHDSGVAWQD 145
++ DFY E D + D
Sbjct: 107 LLVIADDFY-KESDYIRNYDD 126
>gi|299134616|ref|ZP_07027808.1| polysaccharide biosynthesis protein [Afipia sp. 1NLS2]
gi|298590426|gb|EFI50629.1| polysaccharide biosynthesis protein [Afipia sp. 1NLS2]
Length = 185
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 11/149 (7%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V I + D+RG + +++ + + V + ++ +R
Sbjct: 39 IEGVTITPLARRTDNRGSLIELLTTRD----NIIEPIVHVYLVEAKAGSVRAWVYHRR-- 92
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EM 121
Q + G DIR SPT+ L + + IP HG + +
Sbjct: 93 --QHDRLAYTQGCFQVALYDIREKSPTFKKLSVLTFGKDRPAMLRIPPYVVHGVKNIGDE 150
Query: 122 NTEVIYKVTDFYSVEH-DSG-VAWQDKSI 148
++ + T+ Y ++ D ++ D I
Sbjct: 151 DSTFVNLPTNIYDPKNPDKSRISASDPRI 179
>gi|323968172|gb|EGB63581.1| WxcM protein [Escherichia coli M863]
Length = 137
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 17/141 (12%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++++ +K D RG L ++ + + + G RG H +
Sbjct: 3 DIKLISLQKHGDERGALI-----ALEEQRNIPFEVKRIYYILETLKGVRRGFHAHKVTRQ 57
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
A +V+ + G + + + I H +
Sbjct: 58 LAIVVK-----------GACKFHLDNGKETKQVELNDPTIALLIEPYIWHEMYDFSDDCV 106
Query: 125 VIYKVTDFYSVEHDSGVAWQD 145
++ DFY E D + D
Sbjct: 107 LLVIADDFY-KESDYIRNYDD 126
>gi|306814838|ref|ZP_07449000.1| WxcM domain protein [Escherichia coli NC101]
gi|305852232|gb|EFM52684.1| WxcM domain protein [Escherichia coli NC101]
Length = 136
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 17/141 (12%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++++ +K D RG L ++ + + + G RG H +
Sbjct: 2 DIKLISLQKHGDERGALI-----ALEEQRNIPFEVKRIYYILETLKGVRRGFHAHKVTRQ 56
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
A +V+ + G + + + I H +
Sbjct: 57 LAIVVK-----------GACKFHLDNGKETKQVELNDPTIALLIEPYIWHEMYDFSDDCV 105
Query: 125 VIYKVTDFYSVEHDSGVAWQD 145
++ DFY E D + D
Sbjct: 106 LLVIADDFY-KESDYIRNYDD 125
>gi|169841083|ref|ZP_02874196.1| hypothetical protein cdivTM_28288 [candidate division TM7
single-cell isolate TM7a]
Length = 83
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 125 VIYKVTDFYSVEHDSGVAWQDKSIDITWPLL----DTILPSVSE 164
+ ++ + Y+ E+DSG+ W D++I+I W + ++SE
Sbjct: 27 LHFQPSITYAPEYDSGILWNDETINIDWKFEEFGINPDELTISE 70
>gi|123464671|ref|XP_001317111.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121899837|gb|EAY04888.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 449
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
+ + +++K+ + D RG +++ L+ + + L+
Sbjct: 15 LEVPGAQVIKSPVYGDIRGNLYESF-------HILKVDYTTSIDEINGIYPGKNTLYGPV 67
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+ +L+ I G++ VD +S I G+ I IP H F +L+
Sbjct: 68 AHKGE-ELLYLIRGKLLVYLVDFNDHSKRAR------IEVVPGMIIRIPCMCIHAFYSLD 120
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEK 165
T T + E ++ + + + +P + P V K
Sbjct: 121 ETTIFDLVKTTSHVEES----HFKPEELGLEFPGPVVLAPHVDNK 161
>gi|169840911|ref|ZP_02874024.1| hypothetical protein cdivTM_27428 [candidate division TM7
single-cell isolate TM7a]
Length = 30
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 128 KVTDFYSVEHDSGVAWQDKSIDITWPL 154
TD Y+ E+DSG+ W D++I+I W L
Sbjct: 4 MNTDLYAPEYDSGILWNDETINIDWKL 30
>gi|94992306|ref|YP_600405.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS2096]
gi|94545814|gb|ABF35861.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus pyogenes
MGAS2096]
Length = 54
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 2 NINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVF 39
I + D+RGWF + + K + + F
Sbjct: 17 EIPGLLEFDIPVRGDNRGWFKENFQRKNVANWLSRTFF 54
>gi|153869078|ref|ZP_01998770.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152074362|gb|EDN71224.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 135
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 14/135 (10%)
Query: 1 MNINPVRILKTRKFEDSRG--WFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHF 58
M+I+ +I++ K D RG F +T E + + + + G R H
Sbjct: 1 MSISDCKIIELPKIHDPRGNLTFIET-------EQHVPFEIKRVYYLYDVPGGATRAGHA 53
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
+ + + D D + + I+
Sbjct: 54 HKQLHQLIIAMSGSFDITLDDGHDKQTYHLNRSYFGLYI-----CPMIWRDIDNFSSGSV 108
Query: 119 LEMNTEVIYKVTDFY 133
Y D+Y
Sbjct: 109 CMALASEHYDEADYY 123
>gi|171910149|ref|ZP_02925619.1| hypothetical protein VspiD_03235 [Verrucomicrobium spinosum DSM
4136]
Length = 245
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 55/174 (31%), Gaps = 38/174 (21%)
Query: 3 INPVRILKTRKFED-SRGWFSQTYSSKL--LKELGLQDVFVQDNHSFSFDCGTIRGLHFQ 59
I V + R F RG+FS+ L ++GL +S GT +G H
Sbjct: 55 IPGVEVFHRRVFHQRYRGYFSEFAREGEALLGKIGLWPKQWATAKMYS---GTSKGFHIH 111
Query: 60 RPPYA----------------------------QAKLVRCIAGRIFDIAVDIRRNSPTYG 91
P Q ++ I G +D R P
Sbjct: 112 PPAIPADATPEAWFKRLFVEEPTNYALRPYDKEQWDVMFFIQGICEMFLIDERAGMPRKK 171
Query: 92 CWVSLE---ISANNGLQIYIPTGFAHGFMT-LEMNTEVIYKVTDFYSVEHDSGV 141
+E + + + + IP G AH + + ++Y + + E++ +
Sbjct: 172 MRFIIEGDDLRGESNVGVVIPAGVAHAIRSASSQDLIMVYGTSTVFLPENEGRI 225
>gi|315926855|gb|EFV06227.1| dTDP-4-dehydrorhamnose 3,5-epimerase domain protein [Campylobacter
jejuni subsp. jejuni DFVF1099]
Length = 48
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 14/45 (31%), Gaps = 3/45 (6%)
Query: 112 FAHGFMTLEMNTEVIYKV---TDFYSVEHDSGVAWQDKSIDITWP 153
+ YK+ ++ AW D+ I I WP
Sbjct: 1 MGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIGIDWP 45
>gi|15678601|ref|NP_275716.1| hypothetical protein MTH573 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2621650|gb|AAB85079.1| unknown [Methanothermobacter thermautotrophicus str. Delta H]
Length = 83
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 15/45 (33%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFS 47
I+ V I + F D RG+ + K G + S
Sbjct: 29 IDGVVINDLKMFSDERGFLMELLRLDDKKLKGENIRQINCFIFLS 73
>gi|78222537|ref|YP_384284.1| WxcM-like protein [Geobacter metallireducens GS-15]
gi|78193792|gb|ABB31559.1| WxcM-like protein [Geobacter metallireducens GS-15]
Length = 309
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 37/135 (27%), Gaps = 16/135 (11%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+ ++ D RG S E G F+ F R + +
Sbjct: 177 IPGVQFVRLPIIPDLRGSLS-------FAEFGQYLPFI-PKRYFLVFDVQSREVRGEHAH 228
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ + C+ G + G I G ++IP +
Sbjct: 229 KELHQFLVCVKGACSVMV--------DDGNCREEYILNTPGAALHIPPLVWGVQYKYSPD 280
Query: 123 TEVIYKVTDFYSVEH 137
++ +D Y E
Sbjct: 281 AVLMVLASDVYKPED 295
>gi|160863307|gb|ABX51874.1| dTDP-6-deoxy-3,4-keto-hexulose isomerase [Cronobacter sakazakii]
Length = 133
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 34/133 (25%), Gaps = 16/133 (12%)
Query: 5 PVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYA 64
++++ + D RG L E + + + F+ RG H +
Sbjct: 2 DIKLIPLQTHGDERGSLV-----SLEDEKNIPFAIKRVYYLFNTKENVSRGFHAHQRLKQ 56
Query: 65 QAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTE 124
A ++ R G + + +YI + +
Sbjct: 57 VAIAIK-----------GSCRFKLDDGKERVEIVLDSPSQGLYIDSFMWREMSDFSPDCV 105
Query: 125 VIYKVTDFYSVEH 137
++ Y
Sbjct: 106 LLILADSHYDESD 118
>gi|301764861|ref|XP_002917858.1| PREDICTED: rho GTPase-activating protein 11A-like [Ailuropoda
melanoleuca]
Length = 1119
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 96 LEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITW 152
E + +H L+ + +++EH+ + D S+
Sbjct: 758 NEHQTTTDENSFSEQDISHQTQKLDREAIIT--CYSAHTIEHEKSIHSNIPRDHSVKPEL 815
Query: 153 PLLDTILPSVSEKDQNLPFLNQIDS 177
P + I S +D+ P L + ++
Sbjct: 816 PSDEHIKKPQSPRDKLNPLLKESEN 840
>gi|281342409|gb|EFB17993.1| hypothetical protein PANDA_006213 [Ailuropoda melanoleuca]
Length = 1016
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 96 LEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQ---DKSIDITW 152
E + +H L+ + +++EH+ + D S+
Sbjct: 655 NEHQTTTDENSFSEQDISHQTQKLDREAIIT--CYSAHTIEHEKSIHSNIPRDHSVKPEL 712
Query: 153 PLLDTILPSVSEKDQNLPFLNQIDS 177
P + I S +D+ P L + ++
Sbjct: 713 PSDEHIKKPQSPRDKLNPLLKESEN 737
>gi|209981004|gb|ACJ05180.1| putative dTDP-6-deoxy-3,4-keto-hexulose isomerase [Salmonella
enterica subsp. enterica serovar Pomona]
Length = 131
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 14/132 (10%), Positives = 34/132 (25%), Gaps = 16/132 (12%)
Query: 6 VRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQ 65
V+++ + D RG K + + + F G +RG H +
Sbjct: 3 VQLIPLQVHGDERGTLISLERDK-----NIDFEIRRVYYIFDTKQGVVRGFHAHKNLK-- 55
Query: 66 AKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEV 125
++ R G + N + + + + +
Sbjct: 56 ---------QLIIPVRGSCRFILDDGYERVSILLDNPSQGLLVNSLIWREMSDFSDDCVL 106
Query: 126 IYKVTDFYSVEH 137
+ ++ Y
Sbjct: 107 MILASNEYDESD 118
>gi|153003637|ref|YP_001377962.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Anaeromyxobacter sp. Fw109-5]
gi|152027210|gb|ABS24978.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Anaeromyxobacter sp. Fw109-5]
Length = 460
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 5/17 (29%), Positives = 9/17 (52%)
Query: 3 INPVRILKTRKFEDSRG 19
I + ++ +F D RG
Sbjct: 61 IEDLVVITPERFRDERG 77
>gi|298353051|gb|ADI77029.1| QdtA [Escherichia coli]
Length = 132
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 36/135 (26%), Gaps = 22/135 (16%)
Query: 6 VRILKTRKFEDSRGWFS---QTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
V+++ + D RG + Y+ + + + F+ G +RG H +
Sbjct: 4 VKLIPLQTHGDDRGSLVALEEGYN--------IPFQIKRVYYIFNTKKGVMRGFHAHKNL 55
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
A VR + G + + + I + +
Sbjct: 56 KQVAIAVR-----------GSCKFKLDNGTDSVEVLLNDPAQGLLIESFIWREMYDFSED 104
Query: 123 TEVIYKVTDFYSVEH 137
++ Y
Sbjct: 105 CVLMVLADSHYDEND 119
>gi|24527250|gb|AAK60451.1| unknown [Escherichia coli]
Length = 134
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 37/134 (27%), Gaps = 19/134 (14%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
MNIN +++ ++ D RG +K + + + ++ + +RG H R
Sbjct: 1 MNIN---LIELQQHGDERGALVSLECNK-----NIPFDIRRVYYIYNTNKNVVRGYHAHR 52
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
++ + G N + I +
Sbjct: 53 KLK-----------QMAICVKGYCTFTLDDGFERISIKLDNPAQGLLIESCLWREMSDFS 101
Query: 121 MNTEVIYKVTDFYS 134
+ ++ Y
Sbjct: 102 EDCVLLVLADADYD 115
>gi|89070575|ref|ZP_01157859.1| Cytochrome c oxidase, aa3 type, subunit I [Oceanicola granulosus
HTCC2516]
gi|89043792|gb|EAR49993.1| Cytochrome c oxidase, aa3 type, subunit I [Oceanicola granulosus
HTCC2516]
Length = 557
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 3/106 (2%)
Query: 14 FEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIA 73
ED RG+F++ + S K++G+ +FV F ++ + C
Sbjct: 11 HEDQRGFFTRWFMSTNHKDIGILYLFVSGFVGF---IAVAFTVYMRMELMTPGVQYMCEE 67
Query: 74 GRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
G F A + + V + + + GF
Sbjct: 68 GARFWPAAESECTPNGHLWNVMITYHGVLMMFFVVIPALFGGFGNY 113
>gi|254455190|ref|ZP_05068625.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198263600|gb|EDY87872.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 1507
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 16/157 (10%)
Query: 25 YSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIR 84
+S + L+E F + T R K + G+ + R
Sbjct: 1113 FSREFLREGLDHSQFECVDVQKCRLWITRRAY-----ELGWTKELFPNDGQGTYGS---R 1164
Query: 85 RNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQ 144
+ + A + + + F H E Y ++Y + + +
Sbjct: 1165 HENDLERIGKKYQWIALDEIAARLSDNFWHLNEWPETPVRYRYTHQNYYR-DIEPTILPT 1223
Query: 145 DKSI------DITWPLLDTI-LPSVSEKDQNLPFLNQ 174
+ D W + + LP VSE D +
Sbjct: 1224 NSRFVTTSGGDEDWMIEPIVRLPEVSEADLKAWPFEE 1260
>gi|330997514|ref|ZP_08321362.1| hypothetical protein HMPREF9442_02462 [Paraprevotella xylaniphila
YIT 11841]
gi|329570459|gb|EGG52186.1| hypothetical protein HMPREF9442_02462 [Paraprevotella xylaniphila
YIT 11841]
Length = 136
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 43/143 (30%), Gaps = 15/143 (10%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPP 62
I V+I+ R D RGWF + G ++ Q G
Sbjct: 6 IEQVKIIPRRLISDERGWFLK-------AITGTEEGIPQHTGEVYLTMGKPGQAKGGHYH 58
Query: 63 YAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMN 122
+ I G +R +E+S + +++P AH +
Sbjct: 59 PKAVEWFTIIEGNAI-----LRLEDVVTHKRKDIEMSLEKAITVFVPNNVAHVVINNSDR 113
Query: 123 TEVIYKVTD-FYSVEHDSGVAWQ 144
++ TD Y + +A+
Sbjct: 114 DFILLAYTDLLYDPKD--TIAYN 134
>gi|227115121|ref|ZP_03828777.1| WxcM domain-containing protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 134
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 40/150 (26%), Gaps = 21/150 (14%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M IN +L+ + D RG L K+ + + + F+ RG H R
Sbjct: 1 MKIN---LLQLQTHGDERGSLI-----ALEKDKNIPFEIKRVYYMFNTKEEVRRGFHAHR 52
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
VR R G + N + I +
Sbjct: 53 QLKQVVIAVR-----------GSCRFLLDDGIEKISILLDNPAQGLLIESFMWREMYNFS 101
Query: 121 MNTEVIYKVTDFYSVEHDSGVAWQDKSIDI 150
+ ++ Y + D+ I I
Sbjct: 102 DDCVLMVLADSLYDESDY--IRNYDEFIRI 129
>gi|115903754|ref|XP_787052.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
gi|115960936|ref|XP_001177730.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 462
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 3 INPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQ 41
I V ++K RG+ +T+S K GL+D F
Sbjct: 8 IQGVYVIKP------RGFLQKTFSEMRFK--GLKDEFKF 38
>gi|302669720|ref|YP_003829680.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus
B316]
gi|302394193|gb|ADL33098.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus
B316]
Length = 412
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 11/114 (9%)
Query: 8 ILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAK 67
I ED RG F++ Y S Q + + S G I+G H+ +
Sbjct: 283 IFDIPTHEDDRGSFTEIYKS---------LNCGQISINVS-KPGVIKGQHWHNSKWEIFI 332
Query: 68 LVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEM 121
+V I + + I + ++ E+S + + + G+ H + L
Sbjct: 333 VV-SGRALIQERKLGIDPETGKEYPVINFEVSGDKLQAVQMLPGYTHNIINLSD 385
>gi|169841370|ref|ZP_02874483.1| hypothetical protein cdivTM_29733 [candidate division TM7
single-cell isolate TM7a]
Length = 39
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 122 NTEVIYKVTDFYSVEHDSGVAWQDK 146
TE YK TD Y+ E+DSG+ W D+
Sbjct: 14 ETEFTYKCTDLYAPEYDSGILWNDE 38
>gi|256819948|ref|YP_003141227.1| NAD-dependent epimerase/dehydratase [Capnocytophaga ochracea DSM
7271]
gi|256581531|gb|ACU92666.1| NAD-dependent epimerase/dehydratase [Capnocytophaga ochracea DSM
7271]
Length = 372
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 14/134 (10%), Positives = 35/134 (26%), Gaps = 19/134 (14%)
Query: 9 LKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKL 68
+K + D RG F + LG+ + H
Sbjct: 253 VKLTQHTDDRGAFVEVIR------LGI------------GGQCSFSTTHPHITRGNHFHT 294
Query: 69 VRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EMNTEVIY 127
+ + I+ + + N + +P + H + + I+
Sbjct: 295 CKIERFTVIKGKALIQLRKIDTQEVLDFYLEGNEPAYVDMPIWYTHNITNIGNDDLYTIF 354
Query: 128 KVTDFYSVEHDSGV 141
+ + Y+ ++
Sbjct: 355 WIDEPYNPDNADTY 368
>gi|257092965|ref|YP_003166606.1| WxcM domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045489|gb|ACV34677.1| WxcM domain protein [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 138
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 13/146 (8%)
Query: 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR 60
M++ RI++ K D RG + E G F + G
Sbjct: 1 MSLQDCRIIELPKIHDPRGNLT-------FIEGGHHVPFDIRRVYY--LYDVPGGADRGA 51
Query: 61 PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE 120
+ FD+ +D R+ + S + F+ G + L
Sbjct: 52 HAHKNLHQFIVAMSGSFDVMLDDGRDKYRFHLNRSYFGLYVCPMMWRYLDNFSSGAVCLV 111
Query: 121 MNTEVIYKVTDF---YSVEHDSGVAW 143
+Y D+ Y ++ +
Sbjct: 112 -LASSMYDQLDYIRDYDKFLEAALKP 136
>gi|237757213|ref|ZP_04585626.1| bifunctional acetyl transferase/isomerase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690626|gb|EEP59821.1| bifunctional acetyl transferase/isomerase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 137
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 20/139 (14%)
Query: 1 MNINPVRILKTRKFEDSRG--WFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHF 58
M+I +I+ K D RG F ++ + + + + G RG H
Sbjct: 1 MSIERCKIINLPKISDPRGNLTFIES-------NKHIPFEIKRVYYLYDVPGGETRGGHA 53
Query: 59 QRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMT 118
+ V + D + RR +YIPT
Sbjct: 54 HKNLQQLLIAVSGSFDVVVDDGYEKRRYHLNRS-----------YYGLYIPTMIWREMDN 102
Query: 119 LEMNTEVIYKVTDFYSVEH 137
+ + +DFY+ +
Sbjct: 103 FSSGSVCLVLASDFYNEDD 121
>gi|153009545|ref|YP_001370760.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum anthropi ATCC
49188]
gi|151561433|gb|ABS14931.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ochrobactrum anthropi ATCC
49188]
Length = 181
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 10 KTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLV 69
++ + D RG ++ Y + + ++ F+ G ++G
Sbjct: 37 ESIRHSDDRGSVTEIYDPRW----NWHPDPMVFSYMFTIRPGMVKGW---GLHKEHEDRY 89
Query: 70 RCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL 119
I+G + + D R S TY + +S + + +P H +
Sbjct: 90 FVISGELELVLFDPRPESSTYNKICKVYLSGSQPRLVNVPKFVWHADHNI 139
>gi|315225357|ref|ZP_07867171.1| capsular polysaccharide biosynthesis protein Cap5F [Capnocytophaga
ochracea F0287]
gi|314944630|gb|EFS96665.1| capsular polysaccharide biosynthesis protein Cap5F [Capnocytophaga
ochracea F0287]
Length = 372
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 39/134 (29%), Gaps = 19/134 (14%)
Query: 9 LKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKL 68
+K + D RG F + LG+ + RG H+ + +
Sbjct: 253 VKLTQHTDDRGAFVEVIR------LGIGGQCSFS----TTHPHITRGNHYHTRKIERFTV 302
Query: 69 VRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTL-EMNTEVIY 127
+ I+ + + N + +P + H + + I+
Sbjct: 303 I--------KGKALIQLRKIDTQEVLDFYLDGNEPAYVDMPIWYTHNITNIGNDDLYTIF 354
Query: 128 KVTDFYSVEHDSGV 141
+ + Y+ ++
Sbjct: 355 WIDEPYNPDNADTY 368
>gi|282851770|ref|ZP_06261133.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282557012|gb|EFB62611.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 54
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 16/49 (32%)
Query: 142 AWQDKSIDITWP----------------LLDTILPSVSEKDQNLPFLNQ 174
AW D I I WP L D +++E+DQ L
Sbjct: 2 AWNDPKIGIEWPHLKGDYPGSPDASGYTLDDGTKLNMAERDQEWKGLKD 50
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.135 0.437
Lambda K H
0.267 0.0414 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,908,643,732
Number of Sequences: 14124377
Number of extensions: 92694754
Number of successful extensions: 183419
Number of sequences better than 10.0: 2281
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 177915
Number of HSP's gapped (non-prelim): 2376
length of query: 198
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 66
effective length of database: 2,978,375,866
effective search space: 196572807156
effective search space used: 196572807156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 77 (34.3 bits)