RPSBLAST alignment of GI: 254780919 and protein with PDBid: 2ixk
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A* Length = 184
Score = 123 bits (310), Expect = 2e-29
Identities = 78/182 (42%), Positives = 104/182 (57%), Gaps = 10/182 (5%)
Query: 1 MNINP-----VRILKTRKFEDSRGWFSQTYSSKLLKE-LGLQDVFVQDNHSFSFDCGTIR 54
M V + + R F D RG+F ++Y+ + +E G FVQDNHS S G +R
Sbjct: 4 MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSA-RGVLR 62
Query: 55 GLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAH 114
GLH+Q Q KLVR G +FD+AVD+RR SPT+G WV +SA N Q++IP GFAH
Sbjct: 63 GLHYQIRQA-QGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAH 121
Query: 115 GFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQ 174
GF+ L E +YK TDF++ EH+ + W D + I WPL D P +SEKD+
Sbjct: 122 GFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDA--PLLSEKDRQGKAFAD 179
Query: 175 ID 176
D
Sbjct: 180 AD 181