HHsearch alignment for GI: 254780920 and conserved domain: COG1086
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=100.00 E-value=4.2e-45 Score=295.13 Aligned_cols=258 Identities=26% Similarity=0.314 Sum_probs=222.5
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC--HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 48997678827799999999868987999947887658--5677762037974999763889999999986227871785
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVN 79 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~--~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~~~~~d~ViH 79 (358)
T Consensus 252 ~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~VfH 331 (588)
T COG1086 252 TVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFH 331 (588)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
T ss_conf 89996898736799999998549878999617637799999999862787516899635346899999986388866887
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12343322222222222222222220247888651232211247842786305543112222222222222222222233
Q gi|254780920|r 80 FAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSA 159 (358)
Q Consensus 80 lAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~~~~E~~~~~p~s~Yg~ 159 (358)
T Consensus 332 AAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~---------~~~V~~~V~iSTDK--------------AV~PtNvmGa 388 (588)
T COG1086 332 AAALKHVPLVEYNPEEAIKTNVLGTENVAEAAI---------KNGVKKFVLISTDK--------------AVNPTNVMGA 388 (588)
T ss_pred HHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHH---------HHCCCEEEEEECCC--------------CCCCCHHHHH
T ss_conf 555536863101889999872173899999999---------83977899970586--------------6688417668
Q ss_pred CCCCCEEEECCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 3221000000123332---2222222222223332222222222222222222222222223322113322220000000
Q gi|254780920|r 160 TKASSDYLVLAWGHTY---GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 (358)
Q Consensus 160 sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~i~g~g~~~Rdfi~v~D~a~~i~~~ 236 (358)
T Consensus 389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS---ViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA 464 (588)
T COG1086 389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS---VIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQA 464 (588)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEEECCEECCCCC---CHHHHHHHHHCCCCCCC-CCCCCEEEEEEHHHHHHHHHHH
T ss_conf 8999999999974104888857999982545458877---77889999975998454-6867056788899999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 122222221113578642026889999886034265556864302334889986
Q gi|254780920|r 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 (358)
Q Consensus 237 ~~~~~~~~~fNigs~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (358)
T Consensus 465 ~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~----~~~~dI~I~~~GlRpGE 514 (588)
T COG1086 465 GAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQ----TPPGDIAIKIIGLRPGE 514 (588)
T ss_pred HHHCCCCCEEEECCCCCEEHHHHHHHHHHHHCC----CCCCCCCEEEEECCCCH
T ss_conf 750689858998189972799999999998177----99888776998558753