HHsearch alignment for GI: 254780920 and conserved domain: PRK05447
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.
Probab=96.04 E-value=0.04 Score=32.25 Aligned_cols=76 Identities=16% Similarity=0.264 Sum_probs=44.0
Q ss_pred CE-EEEECCCCHHHHHHHHHHHHHC-CCEEEEEECCCCCCCHHHHHH---HHCCCCEEEEEC--------------CCCC
Q ss_conf 94-8997678827799999999868-987999947887658567776---203797499976--------------3889
Q gi|254780920|r 1 MR-LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKE---ISQSNLFSFLQV--------------DICD 61 (358)
Q Consensus 1 Mk-ILItG~tGfIGs~l~~~Ll~~~-~~~V~~~d~~~~~~~~~~~~~---~~~~~~v~~i~~--------------Di~d 61 (358)
T Consensus 1 mk~i~IlGsTGSIG~~tL~Vi~~~~~~f~v~~lsa---~~n~~~L~~q~~~f~p~-~v~i~~~~~~~~~~~~~~~~~~~g 76 (379)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRHPDRFRVVALSA---GSNVELLAEQIREFRPK-YVVVADEAAAKELKAALAGKVLAG 76 (379)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEE---CCCHHHHHHHHHHHCCC-EEEECCHHHHHHHHHHCCCCEEEC
T ss_conf 97899985695888999999995868758999992---89799999999994999-999928899999987558828868
Q ss_pred HHHHHHHHHHCCCCEEEEE
Q ss_conf 9999999862278717851
Q gi|254780920|r 62 RECIRSALKEFQPDAIVNF 80 (358)
Q Consensus 62 ~~~l~~~~~~~~~d~ViHl 80 (358)
T Consensus 77 ~~~l~~~~~~~~~D~vi~a 95 (379)
T PRK05447 77 EEGLCELAALPEADVVVAA 95 (379)
T ss_pred HHHHHHHHHCCCCCEEEEE
T ss_conf 8999999736789999981