HHsearch alignment for GI: 254780920 and conserved domain: PRK13886
>PRK13886 conjugal transfer protein TraL; Provisional.
Probab=92.21 E-value=0.6 Score=25.05 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=55.0
Q ss_pred EEECCCCHHHHHHHHHHHH----HCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH---HCCCCE
Q ss_conf 9976788277999999998----689879999478876585677762037974999763889999999986---227871
Q gi|254780920|r 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALK---EFQPDA 76 (358)
Q Consensus 4 LItG~tGfIGs~l~~~Ll~----~~~~~V~~~d~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~---~~~~d~ 76 (358)
T Consensus 6 ~vlqgKGGVGKS~va~~LaQY~~~~~~~~~~iDTDpvN~tf~~ykal-~v~~i~I~e~~~i~~r~FD~l~E~i~~~~~~~ 84 (241)
T PRK13886 6 MVLQGKGGVGKSMIAATIAQYKAGKGQKPLCIDTDPVNATFEGYKAL-NVRRLNIMDGDEINTRNFDALVEMIASTEGDV 84 (241)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCCC-CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf 98558886309999999999998359998556089997053421436-75577752388656666689999985689988
Q ss_pred EEEECCCCCCCCC
Q ss_conf 7851234332222
Q gi|254780920|r 77 IVNFAAESHVDRS 89 (358)
Q Consensus 77 ViHlAa~~~~~~~ 89 (358)
T Consensus 85 VID~GAstfvPL~ 97 (241)
T PRK13886 85 IIDNGASSFVPLS 97 (241)
T ss_pred EEECCHHHHHHHH
T ss_conf 9988517677899