HHsearch alignment for GI: 254780920 and conserved domain: PRK13886

>PRK13886 conjugal transfer protein TraL; Provisional.
Probab=92.21  E-value=0.6  Score=25.05  Aligned_cols=85  Identities=18%  Similarity=0.234  Sum_probs=55.0

Q ss_pred             EEECCCCHHHHHHHHHHHH----HCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH---HCCCCE
Q ss_conf             9976788277999999998----689879999478876585677762037974999763889999999986---227871
Q gi|254780920|r    4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALK---EFQPDA   76 (358)
Q Consensus         4 LItG~tGfIGs~l~~~Ll~----~~~~~V~~~d~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~---~~~~d~   76 (358)
T Consensus         6 ~vlqgKGGVGKS~va~~LaQY~~~~~~~~~~iDTDpvN~tf~~ykal-~v~~i~I~e~~~i~~r~FD~l~E~i~~~~~~~   84 (241)
T PRK13886          6 MVLQGKGGVGKSMIAATIAQYKAGKGQKPLCIDTDPVNATFEGYKAL-NVRRLNIMDGDEINTRNFDALVEMIASTEGDV   84 (241)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCCC-CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf             98558886309999999999998359998556089997053421436-75577752388656666689999985689988


Q ss_pred             EEEECCCCCCCCC
Q ss_conf             7851234332222
Q gi|254780920|r   77 IVNFAAESHVDRS   89 (358)
Q Consensus        77 ViHlAa~~~~~~~   89 (358)
T Consensus        85 VID~GAstfvPL~   97 (241)
T PRK13886         85 IIDNGASSFVPLS   97 (241)
T ss_pred             EEECCHHHHHHHH
T ss_conf             9988517677899