HHsearch alignment for GI: 254780920 and conserved domain: TIGR01832
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase; InterPro: IPR011286 This entry describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (IPR002198 from INTERPRO). This protein has been characterised in Erwinia chrysanthemi as an enzyme of pectin degradation .; GO: 0008678 2-deoxy-D-gluconate 3-dehydrogenase activity, 0051287 NAD binding.
Probab=96.72 E-value=0.0024 Score=39.76 Aligned_cols=168 Identities=19% Similarity=0.188 Sum_probs=108.5
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCEEEEEE-CCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH----HC-CCC
Q ss_conf 4899767882779999999986898799994-78876585677762037974999763889999999986----22-787
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVID-KLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALK----EF-QPD 75 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~~~~V~~~d-~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~----~~-~~d 75 (358)
T Consensus 7 ~alvTGa~tGlGQG~a~gLA-~AGadi~g~~~~~~~~ET~~~v~~~--Gr~f~~~~~Dl~~~~~~~~~~~~~~~~~g~~D 83 (249)
T TIGR01832 7 VALVTGANTGLGQGIAVGLA-EAGADIVGVGHISEPSETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEEFGKID 83 (249)
T ss_pred EEEEECCCCCHHHHHHHHHH-HCCCEEEEECCCCCHHHHHHHHHHH--CCCEEHHHHHHHCHHHHHHHHHHHHHHHCCCC
T ss_conf 68882598873689999998-5774178514312638889999982--52100021212232137899999998618865
Q ss_pred EEEEECCCC----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 178512343----3222222222222222222202478886512322112478-42786305543112222222222222
Q gi|254780920|r 76 AIVNFAAES----HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD-QFRFLQISTDEVYGSLDKGLFSEDMP 150 (358)
Q Consensus 76 ~ViHlAa~~----~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~-~~~~v~~SS~~vYg~~~~~~~~E~~~ 150 (358)
T Consensus 84 iLVNNAGIIrR~da~~f~e~dWd~V~nvNlk~vF~l~q~~-----a~~~l~~G~~GkiiNIAS~LSFQGGirV------- 151 (249)
T TIGR01832 84 ILVNNAGIIRREDAVEFSEKDWDDVMNVNLKSVFFLTQAA-----AKQFLKQGRGGKIINIASLLSFQGGIRV------- 151 (249)
T ss_pred EEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH-----HHHHHHCCCCCCEEEEHHHHHHCCCCCC-------
T ss_conf 6760742210457751561445799986689999999999-----9999964899505751423442267551-------
Q ss_pred CCCCCCCCCCCCCCEEEECCCCC---CCCCCCCCCCCCCCC
Q ss_conf 22222223332210000001233---322222222222223
Q gi|254780920|r 151 YNPSSPYSATKASSDYLVLAWGH---TYGIPVLLSNCSNNY 188 (358)
Q Consensus 151 ~~p~s~Yg~sK~~~E~~~~~~~~---~~~l~~~ilR~~~vy 188 (358)
T Consensus 152 ----PsYTASK~~v~GlTk~lAnEWa~~ginVNAIAPGY~~ 188 (249)
T TIGR01832 152 ----PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYME 188 (249)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf ----2466667777778999998998738815311588766