HHsearch alignment for GI: 254780920 and conserved domain: TIGR01963

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=98.80  E-value=3.7e-08  Score=69.15  Aligned_cols=228  Identities=21%  Similarity=0.248  Sum_probs=145.0

Q ss_pred             CE-EEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH--HCCCCEEEEECCCCCHHHHHHHHHH----C-
Q ss_conf             94-89976788277999999998689879999478876585677762--0379749997638899999999862----2-
Q gi|254780920|r    1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQVDICDRECIRSALKE----F-   72 (358)
Q Consensus         1 Mk-ILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~--~~~~~v~~i~~Di~d~~~l~~~~~~----~-   72 (358)
T Consensus         1 ~ktalVTGaaSGIG~~iA~~LA~a-Ga~v~~~d~~~~~~~~~~~~~~~~~~G~~v~~~~~D~T~~~e~~~~~~~~~~~fG   79 (258)
T TIGR01963         1 GKTALVTGAASGIGLAIAKALAAA-GANVVVNDLGEADEGAEAAAKVATDAGGSVIYLVADVTKEEEIADMIQAVAAEFG   79 (258)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf             948999658716789999999872-9889984678878999999999996188357751478888999999999999856


Q ss_pred             CCCEEEEECCCCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCE-EEEECCCCCCCCCCCCCCCCC
Q ss_conf             787178512343322222----222222222222220247888651232211247842-786305543112222222222
Q gi|254780920|r   73 QPDAIVNFAAESHVDRSI----LGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQF-RFLQISTDEVYGSLDKGLFSE  147 (358)
Q Consensus        73 ~~d~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~-~~v~~SS~~vYg~~~~~~~~E  147 (358)
T Consensus        80 ~~DiLVNNAG~QhVaPiEeFP~~~w~~iiav~LtsaF~t~raA-----lP~Mk~~gwGGRIiNIAS~H--GLvAS-----  147 (258)
T TIGR01963        80 GLDILVNNAGIQHVAPIEEFPPEKWDRIIAVMLTSAFHTIRAA-----LPHMKKQGWGGRIINIASVH--GLVAS-----  147 (258)
T ss_pred             CCCEEEECCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHC-----CCCCCCCCCCCEEEEEEEEC--CCCCC-----
T ss_conf             8874884464014176547786678737302168889999750-----64321378553799710100--00035-----


Q ss_pred             CCCCCCCCCCCCCCCCCEEEECCCC---CCCCCCCCCCCCCCCCCC---CCCCCC----CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2222222222333221000000123---332222222222222333---222222----222222222222222222222
Q gi|254780920|r  148 DMPYNPSSPYSATKASSDYLVLAWG---HTYGIPVLLSNCSNNYGP---YHFPEK----LIPLAITRMIEGSHVFLYGDG  217 (358)
Q Consensus       148 ~~~~~p~s~Yg~sK~~~E~~~~~~~---~~~~l~~~ilR~~~vyGp---~~~~~~----~i~~~i~~~~~g~~~~i~g~g  217 (358)
T Consensus       148 --p~--KSAYVAAKHG~~GLTKv~ALE~A~~giT~NaiCPGYV~TPLV~~Qi~DqAk~rGi~e--E~V~--~~VmL--~~  217 (258)
T TIGR01963       148 --PF--KSAYVAAKHGLIGLTKVLALEVAAHGITANAICPGYVRTPLVEKQIADQAKTRGIPE--EQVI--REVML--KK  217 (258)
T ss_pred             --CC--HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCH--HHHH--HHHCC--CC
T ss_conf             --32--134567743021211555542047887586672875675546765899986518899--8888--98607--88


Q ss_pred             CCCCCCCCCCCCCCCEE-ECCCCC--CCCCCCCCCCC
Q ss_conf             33221133222200000-001222--22221113578
Q gi|254780920|r  218 QNVRDWLYVEDHVRALY-LVLKKG--RIGERYNIGGN  251 (358)
Q Consensus       218 ~~~Rdfi~v~D~a~~i~-~~~~~~--~~~~~fNigs~  251 (358)
T Consensus       218 ~P~k~F~~~~e~A~~a~fLaS~~A~~~TG~~~~~DGG  254 (258)
T TIGR01963       218 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  254 (258)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEECCC
T ss_conf             8984113799999999984173442366207886484