HHsearch alignment for GI: 254780920 and conserved domain: TIGR02622

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase; InterPro: IPR013445 This entry contains CDP-glucose 4,6-dehydratases from a variety of Gram-negative and Gram-positive bacteria. Members are typically encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate CDP-D-glucose. This is used by the proteins in this entry to produce CDP-4-keto-6-deoxyglucose..
Probab=100.00  E-value=0  Score=402.76  Aligned_cols=309  Identities=24%  Similarity=0.402  Sum_probs=257.2

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCE------EEEECCCCCHHHHHHHHHHCCCC
Q ss_conf             489976788277999999998689879999478876585677762037974------99976388999999998622787
Q gi|254780920|r    2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF------SFLQVDICDRECIRSALKEFQPD   75 (358)
Q Consensus         2 kILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~~~~~~v------~~i~~Di~d~~~l~~~~~~~~~d   75 (358)
T Consensus         6 kVl~TGHTGFKGSWL~lWL~-~lGA~V~GYS-L~P~t~PnlFe~l~l~~~~~~~Wyf~~~~gDIrD~~~L~~~~~~~~Pe   83 (361)
T TIGR02622         6 KVLITGHTGFKGSWLSLWLL-ELGAEVAGYS-LDPPTSPNLFELLNLAKKIKDSWYFSSIFGDIRDAAKLEKAIAEFKPE   83 (361)
T ss_pred             EEEEECCCCCCHHHHHHHHH-HCCCEEEEEE-CCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCC
T ss_conf             78984578642558999998-4796798971-688788405557525424323505542330323278999999972898


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf             17851234332222222222222222222024788865123221124784278630554311222222-22222222222
Q gi|254780920|r   76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPS  154 (358)
Q Consensus        76 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~-~~~E~~~~~p~  154 (358)
T Consensus        84 IvFHlAAQPLVr~SY~~P~~Tf~TNVmGT~~lLea~r~~--------~~~~a~v~vTsDK~Y~N~EW~wgYRE~D~LGGh  155 (361)
T TIGR02622        84 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI--------KSVKAVVLVTSDKVYENKEWVWGYRETDPLGGH  155 (361)
T ss_pred             EEEHHHHHHHHHHHHHCHHHHEEEHHHHHHHHHHHHHHC--------CCCEEEEEEECCEEECCCCCCCCCCCCCCCCCC
T ss_conf             983335427889867320202220032225778899746--------995699986167233078788752324788771


Q ss_pred             CCCCCCCCCCEEEECCCCC----------CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2223332210000001233----------32222222222222333222-222222222222222222222222332211
Q gi|254780920|r  155 SPYSATKASSDYLVLAWGH----------TYGIPVLLSNCSNNYGPYHF-PEKLIPLAITRMIEGSHVFLYGDGQNVRDW  223 (358)
Q Consensus       155 s~Yg~sK~~~E~~~~~~~~----------~~~l~~~ilR~~~vyGp~~~-~~~~i~~~i~~~~~g~~~~i~g~g~~~Rdf  223 (358)
T Consensus       156 DPYS~SKAcAELv~~syR~SF~~~~~f~~~h~~~iAsaRAGNVIGGGDWs~DRliPD~irA~~~n~~v~I-RnP~A~RPW  234 (361)
T TIGR02622       156 DPYSSSKACAELVIASYRSSFFGEANFQSTHGIKIASARAGNVIGGGDWSEDRLIPDVIRALSSNKIVTI-RNPDATRPW  234 (361)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCEEEE-ECCCCCCCC
T ss_conf             6775328999999999986068888755468636899860640476750010417899996426873774-377885897


Q ss_pred             CCCCCCCCCEEECCCC-----CCCCC-CCCCCCC--CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEC
Q ss_conf             3322220000000122-----22222-1113578--64202688999988603426555686430233488998653003
Q gi|254780920|r  224 LYVEDHVRALYLVLKK-----GRIGE-RYNIGGN--NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA  295 (358)
Q Consensus       224 i~v~D~a~~i~~~~~~-----~~~~~-~fNigs~--~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (358)
T Consensus       235 QHVLEPL~GYLlLAekL~~~~~~~~~eafNFGP~~~~~~~v~~~v~~~~~~~~g~~~-~~~~----~~~~~~PhEA~lL~  309 (361)
T TIGR02622       235 QHVLEPLSGYLLLAEKLFEGQAELAGEAFNFGPEASENARVVELVADALELWPGDDA-EWEK----QSDNNHPHEANLLK  309 (361)
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE-EEEC----CCCCCCCCCCCCCC
T ss_conf             430145110799999985287341245545588877765559999999996689831-6406----77898872356677


Q ss_pred             CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             1718999981896610899999999999988
Q gi|254780920|r  296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD  326 (358)
Q Consensus       296 ~d~~K~~~~Lgw~p~~~l~egi~~~i~w~~~  326 (358)
T Consensus       310 Ld~~KA~~~LgW~P~w~~~~~v~~T~~WYk~  340 (361)
T TIGR02622       310 LDSDKARALLGWQPRWGLEEAVSRTVEWYKN  340 (361)
T ss_pred             CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             5879998431886554588999999987326