HHsearch alignment for GI: 254780920 and conserved domain: TIGR02622
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase; InterPro: IPR013445 This entry contains CDP-glucose 4,6-dehydratases from a variety of Gram-negative and Gram-positive bacteria. Members are typically encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate CDP-D-glucose. This is used by the proteins in this entry to produce CDP-4-keto-6-deoxyglucose..
Probab=100.00 E-value=0 Score=402.76 Aligned_cols=309 Identities=24% Similarity=0.402 Sum_probs=257.2
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCE------EEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 489976788277999999998689879999478876585677762037974------99976388999999998622787
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF------SFLQVDICDRECIRSALKEFQPD 75 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~~~~~~v------~~i~~Di~d~~~l~~~~~~~~~d 75 (358)
T Consensus 6 kVl~TGHTGFKGSWL~lWL~-~lGA~V~GYS-L~P~t~PnlFe~l~l~~~~~~~Wyf~~~~gDIrD~~~L~~~~~~~~Pe 83 (361)
T TIGR02622 6 KVLITGHTGFKGSWLSLWLL-ELGAEVAGYS-LDPPTSPNLFELLNLAKKIKDSWYFSSIFGDIRDAAKLEKAIAEFKPE 83 (361)
T ss_pred EEEEECCCCCCHHHHHHHHH-HCCCEEEEEE-CCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 78984578642558999998-4796798971-688788405557525424323505542330323278999999972898
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 17851234332222222222222222222024788865123221124784278630554311222222-22222222222
Q gi|254780920|r 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPS 154 (358)
Q Consensus 76 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~-~~~E~~~~~p~ 154 (358)
T Consensus 84 IvFHlAAQPLVr~SY~~P~~Tf~TNVmGT~~lLea~r~~--------~~~~a~v~vTsDK~Y~N~EW~wgYRE~D~LGGh 155 (361)
T TIGR02622 84 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI--------KSVKAVVLVTSDKVYENKEWVWGYRETDPLGGH 155 (361)
T ss_pred EEEHHHHHHHHHHHHHCHHHHEEEHHHHHHHHHHHHHHC--------CCCEEEEEEECCEEECCCCCCCCCCCCCCCCCC
T ss_conf 983335427889867320202220032225778899746--------995699986167233078788752324788771
Q ss_pred CCCCCCCCCCEEEECCCCC----------CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2223332210000001233----------32222222222222333222-222222222222222222222222332211
Q gi|254780920|r 155 SPYSATKASSDYLVLAWGH----------TYGIPVLLSNCSNNYGPYHF-PEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 (358)
Q Consensus 155 s~Yg~sK~~~E~~~~~~~~----------~~~l~~~ilR~~~vyGp~~~-~~~~i~~~i~~~~~g~~~~i~g~g~~~Rdf 223 (358)
T Consensus 156 DPYS~SKAcAELv~~syR~SF~~~~~f~~~h~~~iAsaRAGNVIGGGDWs~DRliPD~irA~~~n~~v~I-RnP~A~RPW 234 (361)
T TIGR02622 156 DPYSSSKACAELVIASYRSSFFGEANFQSTHGIKIASARAGNVIGGGDWSEDRLIPDVIRALSSNKIVTI-RNPDATRPW 234 (361)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCEEEE-ECCCCCCCC
T ss_conf 6775328999999999986068888755468636899860640476750010417899996426873774-377885897
Q ss_pred CCCCCCCCCEEECCCC-----CCCCC-CCCCCCC--CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEC
Q ss_conf 3322220000000122-----22222-1113578--64202688999988603426555686430233488998653003
Q gi|254780920|r 224 LYVEDHVRALYLVLKK-----GRIGE-RYNIGGN--NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 (358)
Q Consensus 224 i~v~D~a~~i~~~~~~-----~~~~~-~fNigs~--~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
T Consensus 235 QHVLEPL~GYLlLAekL~~~~~~~~~eafNFGP~~~~~~~v~~~v~~~~~~~~g~~~-~~~~----~~~~~~PhEA~lL~ 309 (361)
T TIGR02622 235 QHVLEPLSGYLLLAEKLFEGQAELAGEAFNFGPEASENARVVELVADALELWPGDDA-EWEK----QSDNNHPHEANLLK 309 (361)
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE-EEEC----CCCCCCCCCCCCCC
T ss_conf 430145110799999985287341245545588877765559999999996689831-6406----77898872356677
Q ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1718999981896610899999999999988
Q gi|254780920|r 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 (358)
Q Consensus 296 ~d~~K~~~~Lgw~p~~~l~egi~~~i~w~~~ 326 (358)
T Consensus 310 Ld~~KA~~~LgW~P~w~~~~~v~~T~~WYk~ 340 (361)
T TIGR02622 310 LDSDKARALLGWQPRWGLEEAVSRTVEWYKN 340 (361)
T ss_pred CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 5879998431886554588999999987326