HHsearch alignment for GI: 254780920 and conserved domain: cd05290
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.12 E-value=0.0009 Score=42.33 Aligned_cols=188 Identities=16% Similarity=0.111 Sum_probs=93.5
Q ss_pred EEEEECCCCHHHHHHHHHHHHHC-CCEEEEEECCCCC--CCHHHHHHH---HCCCCEEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 48997678827799999999868-9879999478876--585677762---03797499976388999999998622787
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYA--GNLNSLKEI---SQSNLFSFLQVDICDRECIRSALKEFQPD 75 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~-~~~V~~~d~~~~~--~~~~~~~~~---~~~~~v~~i~~Di~d~~~l~~~~~~~~~d 75 (358)
T Consensus 1 KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~~~~~~~~~---~y~~~~----~--aD 70 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYDDCA----D--AD 70 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCC---CHHHHC----C--CC
T ss_conf 9899996-989999999998569988799992889823799998761203589986586679---989946----9--99
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEE-EEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1785123433222222222222222222202478886512322112478427-863055431122222222222222222
Q gi|254780920|r 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPS 154 (358)
Q Consensus 76 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~-~v~~SS~~vYg~~~~~~~~E~~~~~p~ 154 (358)
T Consensus 71 iVVitaG~~~kpg~t~~R~dL~~~N~~I~~~i~~~i~~~---------~p~~i~ivvsN-Pv--Dvmt~~~~k~sg~p~~ 138 (307)
T cd05290 71 IIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV---------TKEAVIILITN-PL--DIAVYIAATEFDYPAN 138 (307)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC---------CCCEEEEECCC-CH--HHHHHHHHHHHCCCCC
T ss_conf 999867776589998358888885789999999998613---------99749998479-38--8999999998489935
Q ss_pred CCCCC-CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22233-3221000000123332222222222222333222222222222222222222222
Q gi|254780920|r 155 SPYSA-TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 (358)
Q Consensus 155 s~Yg~-sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~i~ 214 (358)
T Consensus 139 rViG~Gt~LDsaR~r~~la~~l~v~~~~V~-a~VlGeHG--ds~vp~wS~~~v~G~pl~~~ 196 (307)
T cd05290 139 KVIGTGTMLDTARLRRIVADKYGVDPKNVT-GYVLGEHG--SHAFPVWSLVNIAGLPLDEL 196 (307)
T ss_pred CEEECCCHHHHHHHHHHHHHHHCCCCCCCE-EEEEECCC--CCEEEEEECCEECCEEHHHH
T ss_conf 787202217789999999998499934332-05874479--95787410132888988998