HHsearch alignment for GI: 254780920 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=94.44 E-value=0.12 Score=29.25 Aligned_cols=69 Identities=16% Similarity=0.330 Sum_probs=40.9
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHCCC-EEEEEECCCCCCCHHHHHHHH---CCCCEEEEECCCCCHHHHHHHHHHCCCCE
Q ss_conf 94899767882779999999986898-799994788765856777620---37974999763889999999986227871
Q gi|254780920|r 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEIS---QSNLFSFLQVDICDRECIRSALKEFQPDA 76 (358)
Q Consensus 1 MkILItG~tGfIGs~l~~~Ll~~~~~-~V~~~d~~~~~~~~~~~~~~~---~~~~v~~i~~Di~d~~~l~~~~~~~~~d~ 76 (358)
T Consensus 13 ~~vlVIGa-G~~~~~~~~~L~~~-g~~~i~v~nR-t----~~ka~~la~~~~~~~~~~~~-----~~~l~~~l~~--~Di 78 (134)
T pfam01488 13 KKVLLIGA-GEMARLAAKHLLSK-GAKKITIANR-T----LEKAKELAEEFGGEEVEALP-----LDELEELLAE--ADI 78 (134)
T ss_pred CEEEEECC-CHHHHHHHHHHHHC-CCCEEEEECC-C----HHHHHHHHHHCCCCCEEEEE-----CHHHHHHHHH--CCE
T ss_conf 98999996-09999999999975-9988999547-5----78999999984997258985-----1354413631--999
Q ss_pred EEEECCC
Q ss_conf 7851234
Q gi|254780920|r 77 IVNFAAE 83 (358)
Q Consensus 77 ViHlAa~ 83 (358)
T Consensus 79 vI~aT~s 85 (134)
T pfam01488 79 VISATSA 85 (134)
T ss_pred EEEECCC
T ss_conf 9992599