HHsearch alignment for GI: 254780921 and conserved domain: COG0002
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism].
Probab=96.18 E-value=0.0092 Score=34.78 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=61.9
Q ss_pred CEEEEECCCCHHHHHHHHHHHC--CCEEEEECHHH-CC---------CC-----CHH--HHHHHHHHCCCCEEEECCCCC
Q ss_conf 9499997889788999999964--98599961367-08---------78-----999--999999755998999786344
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-ID---------LL-----KPK--DFASFFLSFSPDVIINPAAYT 61 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~--~~~v~~~~r~~-~D---------~~-----~~~--~~~~~l~~~~pd~Vih~Aa~~ 61 (290)
T Consensus 3 ~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~-~~~~~DvvFlalP-- 79 (349)
T COG0002 3 IKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI-ELDECDVVFLALP-- 79 (349)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHH-HCCCCCEEEEECC--
T ss_conf 1599977887748999999865997379996316645870687582423534554335774553-0156888999068--
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCC---CCCCCCHHHHHHHHHH
Q ss_conf 54322332210242012221100011223333334455321113575--5442111122---2211101245666653
Q gi|254780921|r 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT---NPLNIYGKSKLAGEEK 134 (290)
Q Consensus 62 ~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~~~I~iSS~~Vy~g~~--~~p~~E~d~~---~P~~~Yg~sK~~~E~~ 134 (290)
T Consensus 80 --hg~--------------s~~~v~~l~~~g~~VIDLSadfR~~d~~~ye~~Yg~~h~~~~~l~~avYGLpEl~~e~i 141 (349)
T COG0002 80 --HGV--------------SAELVPELLEAGCKVIDLSADFRLKDPEVYEKWYGFTHAGPELLEDAVYGLPELHREKI 141 (349)
T ss_pred --CHH--------------HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHH
T ss_conf --636--------------88989999747994998873200577777788627777780133154334731298888