HHsearch alignment for GI: 254780921 and conserved domain: COG0451
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=100.00 E-value=3.6e-40 Score=245.30 Aligned_cols=275 Identities=23% Similarity=0.272 Sum_probs=199.3
Q ss_pred CEEEEECCCCHHHHHHHHHHHC-CCEEEEECHH--------------HCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 9499997889788999999964-9859996136--------------708789999999997559989997863445432
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP--------------DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~-~~~v~~~~r~--------------~~D~~~~~~~~~~l~~~~pd~Vih~Aa~~~~~~ 65 (290)
T Consensus 1 ~~iLVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-d~vih~aa~~~~~~ 79 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVP-DAVIHLAAQSSVPD 79 (314)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCC-CEEEECCCCCCCCC
T ss_conf 96999928877799999999858997999917875431124676434225335678998854588-78998886467753
Q ss_pred CCC-CCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC-CCCCCCCC-CCCCCCCCCHHHHHHHHHHHCCCCC-
Q ss_conf 233-2210242012221100011223333-33445532111357-55442111-1222211101245666653101222-
Q gi|254780921|r 66 AED-EPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL-SRTPIDEF-SPTNPLNIYGKSKLAGEEKVASYTN- 140 (290)
Q Consensus 66 ~e~-~~~~~~~~Nv~~~~~l~~~~~~~~~-~~I~iSS~~Vy~g~-~~~p~~E~-d~~~P~~~Yg~sK~~~E~~v~~~~~- 140 (290)
T Consensus 80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~ 159 (314)
T COG0451 80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL 159 (314)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 33214788999999999999999986799879997875012788788887865578888767799999999999997663
Q ss_pred ---CCCCCCCCCCEECCCCC-----CCCEEECCCCCCCC-EEECC--CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf ---32235554200036863-----20002011246652-15304--554544522368999999998442024433443
Q gi|254780921|r 141 ---NYVILRTAWVYSIFGSN-----FLLSMLRLAKERRE-ISVVC--DQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 (290)
Q Consensus 141 ---~~~IlR~~~vyG~~~~~-----~v~~~l~~~~~~~~-i~~~~--d~~~~p~~v~D~a~~i~~~~~~~~~~~~~~~~G 209 (290)
T Consensus 160 ~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~~------- 232 (314)
T COG0451 160 YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG------- 232 (314)
T ss_pred CCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCC-------
T ss_conf 3995799984637888987774207899999998707885035078862242577999999999997388871-------
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHEEECCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCC-CHHHHHHHHHH
Q ss_conf 13762386667889999999999997279800057628588087689975110086899996178999-98999999997
Q gi|254780921|r 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS-TWKEGVRNILV 288 (290)
Q Consensus 210 iyn~~~~~~~~s~~e~a~~I~~~~~~~~~~~~~i~~~~~~~~~~~a~RP~~~~Ld~~K~~~~lg~~~~-~~~e~i~~~i~ 288 (290)
T Consensus 233 ~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~ 306 (314)
T COG0451 233 VFNIGSGTAEITVRELAEAVAEAVGSKAPL---IVYIPL---GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLE 306 (314)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHCCCCCC---CEECCC---CCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 899469877768999999999984887542---010343---22001013432687999997199788998999999999
Q ss_pred H
Q ss_conf 1
Q gi|254780921|r 289 N 289 (290)
Q Consensus 289 ~ 289 (290)
T Consensus 307 ~ 307 (314)
T COG0451 307 W 307 (314)
T ss_pred H
T ss_conf 9