HHsearch alignment for GI: 254780921 and conserved domain: COG1086
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=100.00 E-value=2.6e-33 Score=206.69 Aligned_cols=211 Identities=24% Similarity=0.294 Sum_probs=168.6
Q ss_pred EEEEECCCCHHHHHHHHHHHC-C-CEEEEECHHH-----------------------CCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 499997889788999999964-9-8599961367-----------------------08789999999997559989997
Q gi|254780921|r 2 KCLVIGNNGQIAQSLSSMCVQ-D-VEIIRVGRPD-----------------------IDLLKPKDFASFFLSFSPDVIIN 56 (290)
Q Consensus 2 kiLVtG~~G~iG~~l~~~l~~-~-~~v~~~~r~~-----------------------~D~~~~~~~~~~l~~~~pd~Vih 56 (290)
T Consensus 252 ~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~VfH 331 (588)
T COG1086 252 TVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFH 331 (588)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
T ss_conf 89996898736799999998549878999617637799999999862787516899635346899999986388866887
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8634454322332210242012221100011223333-334455321113575544211112222111012456666531
Q gi|254780921|r 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 (290)
Q Consensus 57 ~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v 135 (290)
T Consensus 332 AAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD--------------KAV~PtNvmGaTKr~aE~~~ 397 (588)
T COG1086 332 AAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD--------------KAVNPTNVMGATKRLAEKLF 397 (588)
T ss_pred HHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC--------------CCCCCCHHHHHHHHHHHHHH
T ss_conf 5555368631018899998721738999999998397789997058--------------66688417668899999999
Q ss_pred CCCCC-------CCCCCCCCCCEECCCCCCCCEEECCCCCCCCEEECC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 01222-------322355542000368632000201124665215304-5545445223689999999984420244334
Q gi|254780921|r 136 ASYTN-------NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC-DQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 (290)
Q Consensus 136 ~~~~~-------~~~IlR~~~vyG~~~~~~v~~~l~~~~~~~~i~~~~-d~~~~p~~v~D~a~~i~~~~~~~~~~~~~~~ 207 (290)
T Consensus 398 ~a~~~~~~~~~T~f~~VRFGNVlGSrGS-ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~---~~gG-- 471 (588)
T COG1086 398 QAANRNVSGTGTRFCVVRFGNVLGSRGS-VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI---AKGG-- 471 (588)
T ss_pred HHHHHCCCCCCCEEEEEEECCEECCCCC-CHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHH---CCCC--
T ss_conf 9974104888857999982545458877-778899999759984546867056788899999999998750---6898--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 431376238666788999999999999
Q gi|254780921|r 208 RGIFHMTADGGPVSWADFAEYIFWESA 234 (290)
Q Consensus 208 ~Giyn~~~~~~~~s~~e~a~~I~~~~~ 234 (290)
T Consensus 472 -eifvld-MGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 472 -EIFVLD-MGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred -CEEEEC-CCCCEEHHHHHHHHHHHHC
T ss_conf -589981-8997279999999999817