HHsearch alignment for GI: 254780921 and conserved domain: COG1087
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=307.32 Aligned_cols=269 Identities=23% Similarity=0.266 Sum_probs=216.1
Q ss_pred CEEEEECCCCHHHHHHHHHH-HCCCEEEEECH-----------H-----HCCCCCHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 94999978897889999999-64985999613-----------6-----7087899999999975599899978634454
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR-----------P-----DIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l-~~~~~v~~~~r-----------~-----~~D~~~~~~~~~~l~~~~pd~Vih~Aa~~~~ 63 (290)
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 92999658654689999999978984899956887888886020485688334319999999986499889987300432
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC--
Q ss_conf 322332210242012221100011223333-33445532111357554421111222211101245666653101222--
Q gi|254780921|r 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-- 140 (290)
Q Consensus 64 ~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v~~~~~-- 140 (290)
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~Pi~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~ 160 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN 160 (329)
T ss_pred CHHHHCHHHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 34441878888603086999999999829976999243010389987664788888998853157999999999998716
Q ss_pred --CCCCCCCCCCEECCC-----------CCCCCEEECC-CCCCCCEEECCCCCCCC--------CCHHHHHHHHHHHHHH
Q ss_conf --322355542000368-----------6320002011-24665215304554544--------5223689999999984
Q gi|254780921|r 141 --NYVILRTAWVYSIFG-----------SNFLLSMLRL-AKERREISVVCDQFGTP--------TSALQIARAIIQIAHN 198 (290)
Q Consensus 141 --~~~IlR~~~vyG~~~-----------~~~v~~~l~~-~~~~~~i~~~~d~~~~p--------~~v~D~a~~i~~~~~~ 198 (290)
T Consensus 161 ~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aHv~Al~~ 240 (329)
T COG1087 161 PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY 240 (329)
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH
T ss_conf 97289998513356798876677999933688999999846886557848989999987022343246679999999999
Q ss_pred HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHEEECCHHHHCCCCCCCC---CCCCCHHHHHHHHCCC
Q ss_conf 4202443344313762386667889999999999997279800057628588087689975---1100868999961789
Q gi|254780921|r 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSKLANTHNIR 275 (290)
Q Consensus 199 ~~~~~~~~~~Giyn~~~~~~~~s~~e~a~~I~~~~~~~~~~~~~i~~~~~~~~~~~a~RP~---~~~Ld~~K~~~~lg~~ 275 (290)
T Consensus 241 L~~~g~~---~~~NLG~G~G-~SV----~evi~a~~~vtg~~ip~~~--------~~RR~GDpa~l~Ad~~kA~~~LgW~ 304 (329)
T COG1087 241 LKEGGSN---NIFNLGSGNG-FSV----LEVIEAAKKVTGRDIPVEI--------APRRAGDPAILVADSSKARQILGWQ 304 (329)
T ss_pred HHHCCCE---EEEECCCCCC-EEH----HHHHHHHHHHHCCCCCEEE--------CCCCCCCCCEEEECHHHHHHHHCCC
T ss_conf 9818960---4897468975-249----9999999998699576265--------7889999611476789999883997
Q ss_pred CC--CHHHHHHH
Q ss_conf 99--98999999
Q gi|254780921|r 276 IS--TWKEGVRN 285 (290)
Q Consensus 276 ~~--~~~e~i~~ 285 (290)
T Consensus 305 p~~~~L~~ii~~ 316 (329)
T COG1087 305 PTYDDLEDIIKD 316 (329)
T ss_pred CCCCCHHHHHHH
T ss_conf 633789999998