HHsearch alignment for GI: 254780921 and conserved domain: COG1090
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].
Probab=99.90 E-value=1.9e-23 Score=151.17 Aligned_cols=270 Identities=19% Similarity=0.163 Sum_probs=168.1
Q ss_pred EEEECCCCHHHHHHHHHH-HCCCEEEEECHHHC----C----CCCHHHHHHHHHHCCCCEEEECCCCCCCCC--CCCCCC
Q ss_conf 999978897889999999-64985999613670----8----789999999997559989997863445432--233221
Q gi|254780921|r 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDI----D----LLKPKDFASFFLSFSPDVIINPAAYTAVDK--AEDEPE 71 (290)
Q Consensus 3 iLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~~~----D----~~~~~~~~~~l~~~~pd~Vih~Aa~~~~~~--~e~~~~ 71 (290)
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~-~~DavINLAG~~I~~rrWt~~~K~ 79 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTL-GIDAVINLAGEPIAERRWTEKQKE 79 (297)
T ss_pred CEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCHHHHCCCC-CCCEEEECCCCCCCCCCCCHHHHH
T ss_conf 9573566501689999998489869999747850233247653343012440367-877899888981544657889999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCC-CCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCCCC
Q ss_conf 02420122211000112233333-3445532--111357554421111222211101245666653101---22232235
Q gi|254780921|r 72 IAFSINAEGAGAIAKAADSIGIP-CIYISTD--YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS---YTNNYVIL 145 (290)
Q Consensus 72 ~~~~~Nv~~~~~l~~~~~~~~~~-~I~iSS~--~Vy~g~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v~~---~~~~~~Il 145 (290)
T Consensus 80 ~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g-~~Fla~lc~~WE~~a~~a~~~gtRvvll 158 (297)
T COG1090 80 EIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG-DDFLAQLCQDWEEEALQAQQLGTRVVLL 158 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCEEEECCCCCC-CCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 999977689999999998526798089852457775588864641578887-7759999999999986664068469999
Q ss_pred CCCCCEECCCCCCCCEEECCCCC--CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHH
Q ss_conf 55420003686320002011246--6521530455454452236899999999844202443344313762386667889
Q gi|254780921|r 146 RTAWVYSIFGSNFLLSMLRLAKE--RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 (290)
Q Consensus 146 R~~~vyG~~~~~~v~~~l~~~~~--~~~i~~~~d~~~~p~~v~D~a~~i~~~~~~~~~~~~~~~~Giyn~~~~~~~~s~~ 223 (290)
T Consensus 159 RtGvVLs~~GG-aL~~m~~~fk~glGG~~-GsGrQ~~SWIhieD~v~~I~fll~~------~~lsGp~N~taP-~PV~~~ 229 (297)
T COG1090 159 RTGVVLSPDGG-ALGKMLPLFKLGLGGKL-GSGRQWFSWIHIEDLVNAILFLLEN------EQLSGPFNLTAP-NPVRNK 229 (297)
T ss_pred EEEEEECCCCC-CHHHHCCHHHHCCCCCC-CCCCCEEEEEEHHHHHHHHHHHHHC------CCCCCCCCCCCC-CCCCHH
T ss_conf 88778617886-03431013552257715-8987303433299999999999847------577775103589-867289
Q ss_pred HHHHHHHHHHHHHCCCCHHEEECCHHHHCCCCCCCCCCCCC-----HHHHHHHHCCCC--CCHHHHHHHHHHH
Q ss_conf 99999999999727980005762858808768997511008-----689999617899--9989999999971
Q gi|254780921|r 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD-----CSKLANTHNIRI--STWKEGVRNILVN 289 (290)
Q Consensus 224 e~a~~I~~~~~~~~~~~~~i~~~~~~~~~~~a~RP~~~~Ld-----~~K~~~~lg~~~--~~~~e~i~~~i~~ 289 (290)
T Consensus 230 ~F~~al~r~l~-----RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~a-GF~F~y~dl~~AL~~il~~ 296 (297)
T COG1090 230 EFAHALGRALH-----RPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAA-GFQFQYPDLEEALADILKR 296 (297)
T ss_pred HHHHHHHHHHC-----CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHC-CCEEECCCHHHHHHHHHHC
T ss_conf 99999999867-----9953569389999985225898863603447999877-9816657799999999726