HHsearch alignment for GI: 254780921 and conserved domain: PRK00436

Probab=97.10  E-value=0.0016  Score=39.11  Aligned_cols=86  Identities=21%  Similarity=0.301  Sum_probs=50.3

Q ss_pred             CEEEEECCCCHHHHHHHHHHHC--CCEEEEECHHHC----------------CCCC-HHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             9499997889788999999964--985999613670----------------8789-99999999755998999786344
Q gi|254780921|r    1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDI----------------DLLK-PKDFASFFLSFSPDVIINPAAYT   61 (290)
Q Consensus         1 MkiLVtG~~G~iG~~l~~~l~~--~~~v~~~~r~~~----------------D~~~-~~~~~~~l~~~~pd~Vih~Aa~~   61 (290)
T Consensus         2 ~kVaIvGAtG~vG~eli~lL~~hp~~ei~~las~~saGk~i~~~~p~l~~~~~~~~~~~~~~~~~--~~~Divf~alp~~   79 (345)
T PRK00436          2 IKVAIVGASGYTGGELLRLLLNHPEVEIVYLTSRSSAGKPLSDLHPHLRGLVDLVLEPLDPEEIA--AGADVVFLALPHG   79 (345)
T ss_pred             CEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCEEEECCHHHHC--CCCCEEEECCCHH
T ss_conf             19999896618899999999809986799997578689737785811037778747649988942--6999999889838


Q ss_pred             CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             543223322102420122211000112233333344553211135
Q gi|254780921|r   62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG  106 (290)
Q Consensus        62 ~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~~~I~iSS~~Vy~g  106 (290)
T Consensus        80 ------------------~S~~~~~~~~~~g~~VID~SsdfR~~~  106 (345)
T PRK00436         80 ------------------VSMELAPQLLEAGVKVIDLSADFRLKD  106 (345)
T ss_pred             ------------------HHHHHHHHHHHCCCEEEECCHHHHCCC
T ss_conf             ------------------999999999866987998970120367