HHsearch alignment for GI: 254780921 and conserved domain: PRK10217
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional.
Probab=100.00 E-value=0 Score=321.83 Aligned_cols=280 Identities=21% Similarity=0.259 Sum_probs=215.3
Q ss_pred CE-EEEECCCCHHHHHHHHHHH-CCCE-EEEECHH---------------------HCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 94-9999788978899999996-4985-9996136---------------------708789999999997559989997
Q gi|254780921|r 1 MK-CLVIGNNGQIAQSLSSMCV-QDVE-IIRVGRP---------------------DIDLLKPKDFASFFLSFSPDVIIN 56 (290)
Q Consensus 1 Mk-iLVtG~~G~iG~~l~~~l~-~~~~-v~~~~r~---------------------~~D~~~~~~~~~~l~~~~pd~Vih 56 (290)
T Consensus 1 MKkILVTGg~GFIGs~Lv~~Ll~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~pD~ViH 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEYQPDCVMH 80 (355)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 99699937875799999999997699889998289876525444454127871699800588999999998619988999
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC---------CC-CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCC
Q ss_conf 8634454322332210242012221100011223---------33-33344553211135--755442111122221110
Q gi|254780921|r 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS---------IG-IPCIYISTDYVFDG--LSRTPIDEFSPTNPLNIY 124 (290)
Q Consensus 57 ~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~---------~~-~~~I~iSS~~Vy~g--~~~~p~~E~d~~~P~~~Y 124 (290)
T Consensus 81 lAa~~~~~~s~~~p~~~~~~N~~gt~~lleaar~~~~~l~~~~~~~~~~~~~SS~~vYG~~~~~~~~~~E~~~~~P~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred ECCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 42422110121196775430307578999999997754433036614888655420036777888876778888999888
Q ss_pred HHHHHHHHHHHCCCCC----CCCCCCCCCCEECCCC--CCCCEEECCCCCCCCEEECCC--CCCCCCCHHHHHHHHHHHH
Q ss_conf 1245666653101222----3223555420003686--320002011246652153045--5454452236899999999
Q gi|254780921|r 125 GKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIA 196 (290)
Q Consensus 125 g~sK~~~E~~v~~~~~----~~~IlR~~~vyG~~~~--~~v~~~l~~~~~~~~i~~~~d--~~~~p~~v~D~a~~i~~~~ 196 (290)
T Consensus 161 g~sK~~~E~l~~~~~~~~gl~~~i~R~~nvYGP~~~~~~~i~~~i~~~~~g~~i~i~G~G~q~Rdf~yV~D~v~a~~~~~ 240 (355)
T PRK10217 161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVA 240 (355)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHH
T ss_conf 99987665543555541588769723575579199984049999999974998862799982897585899999999999
Q ss_pred HHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCH-HEEECCHHHHCCCCCCCC---CCCCCHHHHHHHH
Q ss_conf 844202443344313762386667889999999999997279800-057628588087689975---1100868999961
Q gi|254780921|r 197 HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS-KVYRIFTKQYPTKAHRPA---YSCLDCSKLANTH 272 (290)
Q Consensus 197 ~~~~~~~~~~~~Giyn~~~~~~~~s~~e~a~~I~~~~~~~~~~~~-~i~~~~~~~~~~~a~RP~---~~~Ld~~K~~~~l 272 (290)
T Consensus 241 ~~~~------~ge~yNiG~g-~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~-~~~i~~~~~rp~~~~~~~~D~ska~~~L 312 (355)
T PRK10217 241 TTGK------VGETYNIGGH-NERKNLDVVETICELLEELAPNKPHGVAHY-RDLITFVADRPGHDLRYAIDASKIAREL 312 (355)
T ss_pred HCCC------CCCEEEECCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-CCCEEECCCCCCCCCEEEECHHHHHHHH
T ss_conf 6699------9997997999-962079999999999997623566554443-4551567999999856322889999984
Q ss_pred CCCCC-CHHHHHHHHHH
Q ss_conf 78999-98999999997
Q gi|254780921|r 273 NIRIS-TWKEGVRNILV 288 (290)
Q Consensus 273 g~~~~-~~~e~i~~~i~ 288 (290)
T Consensus 313 Gw~P~~sleeGl~~ti~ 329 (355)
T PRK10217 313 GWLPQETFESGMRKTVQ 329 (355)
T ss_pred CCCCCCCHHHHHHHHHH
T ss_conf 99889999999999999