HHsearch alignment for GI: 254780921 and conserved domain: PRK12815
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=96.28 E-value=0.018 Score=33.10 Aligned_cols=139 Identities=17% Similarity=0.161 Sum_probs=76.5
Q ss_pred EEEEECCCC----------HHHHHHHHHH-HCCCEEEEECHHHC------CC--------CCHHHHHHHHHHCCCCEEEE
Q ss_conf 499997889----------7889999999-64985999613670------87--------89999999997559989997
Q gi|254780921|r 2 KCLVIGNNG----------QIAQSLSSMC-VQDVEIIRVGRPDI------DL--------LKPKDFASFFLSFSPDVIIN 56 (290)
Q Consensus 2 kiLVtG~~G----------~iG~~l~~~l-~~~~~v~~~~r~~~------D~--------~~~~~~~~~l~~~~pd~Vih 56 (290)
T Consensus 9 kvLiiGsGpi~IGqa~EfDysg~qA~~aLkeeG~~vvlvN~NPaTi~TD~~~ad~vY~ePlt~e~v~~Ii~~E~Pd~il~ 88 (1068)
T PRK12815 9 KILVIGSGPIIIGQAAEFDYSGTQACKALKEEGYQVVLVNPNPATIMTDPEPADTVYFEPLTLEFVKRIIRREKPDALLA 88 (1068)
T ss_pred EEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEE
T ss_conf 89998988153123446565699999999986998999889832620898744437885898999999999749998986
Q ss_pred -CCCCCCCCCCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHHH
Q ss_conf -8634454322332210242012221100011--2233333344553211135755442----11112222111012456
Q gi|254780921|r 57 -PAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYISTDYVFDGLSRTPI----DEFSPTNPLNIYGKSKL 129 (290)
Q Consensus 57 -~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~--~~~~~~~~I~iSS~~Vy~g~~~~p~----~E~d~~~P~~~Yg~sK~ 129 (290)
T Consensus 89 ~~GGqtaLnla---------------~~L~~~GiL~k~~v~llGt~~~~I~~aedR~~f~~~m~~ig~~~~~s~~~~s~~ 153 (1068)
T PRK12815 89 TLGGQTALNLA---------------VKLLEAGILEQYGVELLGTNVEAIQKGEDRERFRALMKELGEPVPESEIVDSEE 153 (1068)
T ss_pred CCCCHHHHHHH---------------HHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHH
T ss_conf 77784799999---------------999975977865964967999999864599999999997699999705219999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCEECCCC
Q ss_conf 666531012223223555420003686
Q gi|254780921|r 130 AGEEKVASYTNNYVILRTAWVYSIFGS 156 (290)
Q Consensus 130 ~~E~~v~~~~~~~~IlR~~~vyG~~~~ 156 (290)
T Consensus 154 ea~~~a~~ig-~PvivRps~~lGg~g~ 179 (1068)
T PRK12815 154 EALRFAEKIG-FPIIVRPAYTLGGDGG 179 (1068)
T ss_pred HHHHHHHHCC-CCEEEEECCCCCCCCC
T ss_conf 9999998669-9899983610668965