HHsearch alignment for GI: 254780921 and conserved domain: TIGR03206
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.27 E-value=6e-12 Score=86.49 Aligned_cols=129 Identities=16% Similarity=0.147 Sum_probs=95.7
Q ss_pred EEEEECCCCHHHHHHHHHH-HCCCEEEEECHHH---------------------CCCCCHHHHHHHHHHC-----CCCEE
Q ss_conf 4999978897889999999-6498599961367---------------------0878999999999755-----99899
Q gi|254780921|r 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD---------------------IDLLKPKDFASFFLSF-----SPDVI 54 (290)
Q Consensus 2 kiLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~~---------------------~D~~~~~~~~~~l~~~-----~pd~V 54 (290)
T Consensus 5 valITG~s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~~~v~~~v~~~~~~~G~iDil 84 (250)
T TIGR03206 5 TAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVL 84 (250)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 99996857689999999999879999999798899999999999539928999944899999999999999975999799
Q ss_pred EECCCCCCCCC----CCCCCCEEEEECCCCCCCCCCCCC----CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 97863445432----233221024201222110001122----333-333445532111357554421111222211101
Q gi|254780921|r 55 INPAAYTAVDK----AEDEPEIAFSINAEGAGAIAKAAD----SIG-IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 (290)
Q Consensus 55 ih~Aa~~~~~~----~e~~~~~~~~~Nv~~~~~l~~~~~----~~~-~~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg 125 (290)
T Consensus 85 vnnAg~~~~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~~~~~---~--------~~~~~Y~ 153 (250)
T TIGR03206 85 VNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG---S--------SGEAVYA 153 (250)
T ss_pred EECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC---C--------CCCHHHH
T ss_conf 9898889998903499999999999982999999999999999749917999655775768---9--------9858899
Q ss_pred HHHHHHHHHHCCCCCC
Q ss_conf 2456666531012223
Q gi|254780921|r 126 KSKLAGEEKVASYTNN 141 (290)
Q Consensus 126 ~sK~~~E~~v~~~~~~ 141 (290)
T Consensus 154 asKaav~~ltk~lA~e 169 (250)
T TIGR03206 154 ACKGGLVAFSKTMARE 169 (250)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999