HHsearch alignment for GI: 254780921 and conserved domain: TIGR03325
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.14 E-value=5.8e-11 Score=80.94 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=86.1
Q ss_pred EEEECCCCHHHHHHHHHH-HCCCEEEEECHHH------------------CCCCCHHHHHHHHHH-----CCCCEEEECC
Q ss_conf 999978897889999999-6498599961367------------------087899999999975-----5998999786
Q gi|254780921|r 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD------------------IDLLKPKDFASFFLS-----FSPDVIINPA 58 (290)
Q Consensus 3 iLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~~------------------~D~~~~~~~~~~l~~-----~~pd~Vih~A 58 (290)
T Consensus 8 alITGgs~GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~~~~~v~~~~~~~G~iDiLVnNA 87 (262)
T TIGR03325 8 VLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNA 87 (262)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99906787899999999998799999998998999999986799679998457999999999999999849988899726
Q ss_pred CCCCCCC---------CCCCCCEEEEECCCCCCCCCCCCC----CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3445432---------233221024201222110001122----33-333344553211135755442111122221110
Q gi|254780921|r 59 AYTAVDK---------AEDEPEIAFSINAEGAGAIAKAAD----SI-GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 (290)
Q Consensus 59 a~~~~~~---------~e~~~~~~~~~Nv~~~~~l~~~~~----~~-~~~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Y 124 (290)
T Consensus 88 G~~~~~~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~------------~~~~~Y 155 (262)
T TIGR03325 88 GIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN------------GGGPLY 155 (262)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC------------CCCHHH
T ss_conf 51687764345862414999999999974999999999999999709818999871032488------------996689
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 124566665310122
Q gi|254780921|r 125 GKSKLAGEEKVASYT 139 (290)
Q Consensus 125 g~sK~~~E~~v~~~~ 139 (290)
T Consensus 156 ~asKaal~~ltr~lA 170 (262)
T TIGR03325 156 TAAKHAVVGLVKELA 170 (262)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999