HHsearch alignment for GI: 254780921 and conserved domain: cd00704
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.86 E-value=0.00074 Score=40.94 Aligned_cols=95 Identities=19% Similarity=0.199 Sum_probs=54.1
Q ss_pred CEEEEECCCCHHHHHHHHHHHCC----C----EEEEECHHH---------CCCCCH-----------HHHHHHHHHCCCC
Q ss_conf 94999978897889999999649----8----599961367---------087899-----------9999999755998
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQD----V----EIIRVGRPD---------IDLLKP-----------KDFASFFLSFSPD 52 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~~----~----~v~~~~r~~---------~D~~~~-----------~~~~~~l~~~~pd 52 (290)
T Consensus 1 ~KV~IiGA~G~IG~~la~~l~~~~l~g~~~~i~l~L~Di~~~~~~~~G~~mdl~~~a~~~~~~v~~~~~~~~~~~~a--D 78 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDV--D 78 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHCCC--C
T ss_conf 98999899978999999999728636998600899975888655531487866534665558748428858983799--8
Q ss_pred EEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC---CCCCCCCC
Q ss_conf 999786344543223322102420122211000112233---33334455
Q gi|254780921|r 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---GIPCIYIS 99 (290)
Q Consensus 53 ~Vih~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~I~iS 99 (290)
T Consensus 79 vViitaG~prkpG--~tR~DLl~~N~~I~k~~~~~i~~~a~p~~~vivvs 126 (323)
T cd00704 79 VAILVGAFPRKPG--MERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred EEEECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 8998278788999--82799998748999999999985179983899957