HHsearch alignment for GI: 254780921 and conserved domain: cd01337
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.76 E-value=0.0015 Score=39.29 Aligned_cols=90 Identities=24% Similarity=0.258 Sum_probs=55.7
Q ss_pred CEEEEECCCCHHHHHHHHHHHC-C--CEEEEECHHH-----CCCCC------------HHHHHHHHHHCCCCEEEECCCC
Q ss_conf 9499997889788999999964-9--8599961367-----08789------------9999999975599899978634
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQ-D--VEIIRVGRPD-----IDLLK------------PKDFASFFLSFSPDVIINPAAY 60 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~-~--~~v~~~~r~~-----~D~~~------------~~~~~~~l~~~~pd~Vih~Aa~ 60 (290)
T Consensus 1 mKV~IIGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~g~a~DL~h~~~~~~v~~~~~~~~~~~~l~da--DiVVitAG~ 78 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGA--DVVVIPAGV 78 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCC--CEEEECCCC
T ss_conf 989999999818999999997299977699982774266755321656568512570887466774799--999987898
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 4543223322102420122211000112233333
Q gi|254780921|r 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 (290)
Q Consensus 61 ~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~~ 94 (290)
T Consensus 79 ~rkp--G~tR~dLl~~N~~I~k~i~~~i~~~~p~ 110 (310)
T cd01337 79 PRKP--GMTRDDLFNINAGIVRDLATAVAKACPK 110 (310)
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8997--9898999874078899999999820998