HHsearch alignment for GI: 254780921 and conserved domain: cd05292
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.90 E-value=0.0043 Score=36.61 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=58.1
Q ss_pred CEEEEECCCCHHHHHHHHHHHC---CCEEEEECHHH-------CCCCCHHHH----------HHHHHHCCCCEEEECCCC
Q ss_conf 9499997889788999999964---98599961367-------087899999----------999975599899978634
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPD-------IDLLKPKDF----------ASFFLSFSPDVIINPAAY 60 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~---~~~v~~~~r~~-------~D~~~~~~~----------~~~l~~~~pd~Vih~Aa~ 60 (290)
T Consensus 1 mKI~IIGa-G~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~DL~~a~~~~~~~~i~~~~~~~l~d--aDvVVitaG~ 77 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKG--ADVVVITAGA 77 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHCC--CCEEEECCCC
T ss_conf 97999994-88899999999867998879999188984512568766241036881684099999779--9999989999
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC--CCCCCC
Q ss_conf 454322332210242012221100011223333--334455
Q gi|254780921|r 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYIS 99 (290)
Q Consensus 61 ~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~I~iS 99 (290)
T Consensus 78 ~rk~--g~tR~dll~~Na~I~~~i~~~i~~~~p~~ivivvs 116 (308)
T cd05292 78 NQKP--GETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9998--99878999888999999999998419980899727