HHsearch alignment for GI: 254780921 and conserved domain: cd06334
>cd06334 PBP1_ABC_ligand_binding_like_1 Type I periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in transport of amino acids, peptides, or inorganic ions. This subgroup includes the type I periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in transport of amino acids, peptides, or inorganic ions. Members of this group are sequence-similar to members of the family of ABC-type hydrophobic amino acid transporters, such as leucine-isoleucine-valine-binding protein (LIVBP); however their ligand specificity has not been determined experimentally.
Probab=90.37 E-value=1.2 Score=22.80 Aligned_cols=13 Identities=8% Similarity=0.123 Sum_probs=9.6
Q ss_pred EECCCCHHHHHHH
Q ss_conf 9978897889999
Q gi|254780921|r 5 VIGNNGQIAQSLS 17 (290)
Q Consensus 5 VtG~~G~iG~~l~ 17 (290)
T Consensus 8 lTG~~a~~G~~~~ 20 (351)
T cd06334 8 RTGPTAFVGIPYA 20 (351)
T ss_pred CCCCHHHCCHHHH
T ss_conf 8784022187799