HHsearch alignment for GI: 254780921 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=93.28 E-value=0.27 Score=26.51 Aligned_cols=56 Identities=20% Similarity=0.364 Sum_probs=35.7
Q ss_pred CEEEEECCCCHHHHHHHHHHHC-CC-EEEEECHHH---------C-----CCCCHHHHHHHHHHCCCCEEEECCC
Q ss_conf 9499997889788999999964-98-599961367---------0-----8789999999997559989997863
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQ-DV-EIIRVGRPD---------I-----DLLKPKDFASFFLSFSPDVIINPAA 59 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~-~~-~v~~~~r~~---------~-----D~~~~~~~~~~l~~~~pd~Vih~Aa 59 (290)
T Consensus 13 ~~vlVIGa-G~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~~~~l~~~l~~~--DivI~aT~ 84 (134)
T pfam01488 13 KKVLLIGA-GEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALPLDELEELLAEA--DIVISATS 84 (134)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHC--CEEEEECC
T ss_conf 98999996-09999999999975998899954757899999998499725898513544136319--99999259