HHsearch alignment for GI: 254780921 and conserved domain: pfam02719
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=100.00 E-value=5.6e-45 Score=272.33 Aligned_cols=205 Identities=23% Similarity=0.259 Sum_probs=173.0
Q ss_pred EEEECCCCHHHHHHHHHH-HCC-CEEEEECHH-----------------------HCCCCCHHHHHHHHHHCCCCEEEEC
Q ss_conf 999978897889999999-649-859996136-----------------------7087899999999975599899978
Q gi|254780921|r 3 CLVIGNNGQIAQSLSSMC-VQD-VEIIRVGRP-----------------------DIDLLKPKDFASFFLSFSPDVIINP 57 (290)
Q Consensus 3 iLVtG~~G~iG~~l~~~l-~~~-~~v~~~~r~-----------------------~~D~~~~~~~~~~l~~~~pd~Vih~ 57 (290)
T Consensus 1 ILVTGGaGFIGS~Lv~~Ll~~g~~~v~v~d~~~~~~~~~~~~l~~~~~~~~~~~~~~DI~D~~~l~~~~~~~~~D~V~Hl 80 (280)
T pfam02719 1 VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIEQELREEYNDPKLRFFIGDVRDRERLERAMEEYGVDTVFHA 80 (280)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 79974886799999999996899889999088742778999988626789838998116898999999875499999981
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 634454322332210242012221100011223333-3344553211135755442111122221110124566665310
Q gi|254780921|r 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 (290)
Q Consensus 58 Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v~ 136 (290)
T Consensus 81 AA~~~V~~s~~~P~~~~~~Nv~gT~nlLe~a~~~~vk~~v~~STd~a--------------~~P~s~Yg~sK~~~E~l~~ 146 (280)
T pfam02719 81 AALKHVPLVEYNPMEAIKTNVLGTENVAEAAIENGVEKFVLISTDKA--------------VNPTNVMGATKRLAEKLFQ 146 (280)
T ss_pred HHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC--------------CCCCCCCCCCHHHHHHHHH
T ss_conf 03116532766999999887277799998888539624551476644--------------5699845423777899999
Q ss_pred CCCC-------CCCCCCCCCCEECCCCCCCCEEECCCCCCCCEEEC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 1222-------32235554200036863200020112466521530-455454452236899999999844202443344
Q gi|254780921|r 137 SYTN-------NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV-CDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 (290)
Q Consensus 137 ~~~~-------~~~IlR~~~vyG~~~~~~v~~~l~~~~~~~~i~~~-~d~~~~p~~v~D~a~~i~~~~~~~~~~~~~~~~ 208 (290)
T Consensus 147 ~y~~~~~~~~~~~~~lR~fNVyGprgs-VIp~Fi~~~~~~~pi~I~dg~qtRdf~~V~D~v~~~l~a~~~~~------~g 219 (280)
T pfam02719 147 AANRESGSGKTRFSAVRFGNVLGSRGS-VIPLFKKQIAEGGPVTVTHPDMTRFFMTIPEAVQLVLQAGAMGK------GG 219 (280)
T ss_pred HHHHHHCCCCCEEEEEEECCEECCCCC-CHHHHHHHHHCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHCC------CC
T ss_conf 999971999854898754450289977-09999999985998656599843855879999999999997287------78
Q ss_pred CCEEEECCCCCCCHHHHHHHH
Q ss_conf 313762386667889999999
Q gi|254780921|r 209 GIFHMTADGGPVSWADFAEYI 229 (290)
Q Consensus 209 Giyn~~~~~~~~s~~e~a~~I 229 (290)
T Consensus 220 eifnig~-g~~~sI~dLAk~i 239 (280)
T pfam02719 220 EIFVLDM-GEPVKIVDLAKAM 239 (280)
T ss_pred CEEECCC-CCCEEHHHHHHHH
T ss_conf 6788889-9866999999975