HHsearch alignment for GI: 254780921 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=99.87 E-value=1.8e-21 Score=140.10 Aligned_cols=199 Identities=19% Similarity=0.172 Sum_probs=133.0
Q ss_pred EEEECCCCHHHHHHHHHH-HCCCEEEEECHH-----------------HCCCCCHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 999978897889999999-649859996136-----------------70878999999999755998999786344543
Q gi|254780921|r 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRP-----------------DIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 (290)
Q Consensus 3 iLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~-----------------~~D~~~~~~~~~~l~~~~pd~Vih~Aa~~~~~ 64 (290)
T Consensus 1 IlV~GatG~iG~~vv~~L~~~g~~Vr~l~R~~~~~~~~~l~~~gve~v~gD~~d~~sl~~al~gv--d~v~~~~~~~~-- 76 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVEALKGV--DVVFSVTGFWL-- 76 (232)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCC--CEEEEECCCCC--
T ss_conf 09989682899999999985899389997187366566664179889990688878999996799--88999158874--
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 22332210242012221100011223333-33445532111357554421111222211101245666653101222322
Q gi|254780921|r 65 KAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 (290)
Q Consensus 65 ~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v~~~~~~~~ 143 (290)
T Consensus 77 ----------~~~~~~~~~~~~AA~~aGVk~~V~ss~~~~--------~~~~~~~~~~~~~~~~K~~~e~~l~~~g~~~t 138 (232)
T pfam05368 77 ----------SKEIEDGKKLADAAKEAGVKHFIPSEFGND--------VDRSNGVEPAVPHFDSKAEVERYIRALGIPYT 138 (232)
T ss_pred ----------CHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
T ss_conf ----------177999999999999739983455550125--------54567666552788989999999998199859
Q ss_pred CCCCCCCEECCCCCCCCEEECCCCCCCCEEECCC---CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
Q ss_conf 3555420003686320002011246652153045---5454452236899999999844202443344313762386667
Q gi|254780921|r 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD---QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 (290)
Q Consensus 144 IlR~~~vyG~~~~~~v~~~l~~~~~~~~i~~~~d---~~~~p~~v~D~a~~i~~~~~~~~~~~~~~~~Giyn~~~~~~~~ 220 (290)
T Consensus 139 ilrp~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~l~~p~~-----~~~~~~~~~~-~~l 211 (232)
T pfam05368 139 FVYAGFFMGNFLSNLAPPG-DLAPPRDKVTLLGPGNPKAVPLDDEEDIGTYVIKILDDPRK-----LKGKYIRPPG-NIL 211 (232)
T ss_pred EEECCCHHHHHHHHHHHHH-HCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCHHH-----CCCEEEEECC-CCC
T ss_conf 9968425430165654432-02576536999448987611265288999999999649121-----1999998289-867
Q ss_pred CHHHHHHHHH
Q ss_conf 8899999999
Q gi|254780921|r 221 SWADFAEYIF 230 (290)
Q Consensus 221 s~~e~a~~I~ 230 (290)
T Consensus 212 T~~Eia~~~~ 221 (232)
T pfam05368 212 SGNEIAELWS 221 (232)
T ss_pred CHHHHHHHHH
T ss_conf 9999999999