HHsearch alignment for GI: 254780921 and conserved domain: smart00859
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=92.12 E-value=0.13 Score=28.35 Aligned_cols=89 Identities=17% Similarity=0.283 Sum_probs=45.1
Q ss_pred EEEEECCCCHHHHHHHHHHHC--CCEEEEE--CHHHC--C-------CCC---HHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 499997889788999999964--9859996--13670--8-------789---999999997559989997863445432
Q gi|254780921|r 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRV--GRPDI--D-------LLK---PKDFASFFLSFSPDVIINPAAYTAVDK 65 (290)
Q Consensus 2 kiLVtG~~G~iG~~l~~~l~~--~~~v~~~--~r~~~--D-------~~~---~~~~~~~l~~~~pd~Vih~Aa~~~~~~ 65 (290)
T Consensus 1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~~~G~~i~~~~~~l~~~~~~~~~~~~~~~~~~Dvvf~a~p~~---~ 77 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHG---V 77 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCEEEECCCCH---H
T ss_conf 9899894519999999999858997457777404658975788596645773505653311001799999938827---8
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2332210242012221100011223333334455321113
Q gi|254780921|r 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 (290)
Q Consensus 66 ~e~~~~~~~~~Nv~~~~~l~~~~~~~~~~~I~iSS~~Vy~ 105 (290)
T Consensus 78 s~~------------~~~~~~~~~~~g~~VIDlSadfRl~ 105 (122)
T smart00859 78 SKE------------IAPLLPKAAEAGVKVIDLSSAFRMD 105 (122)
T ss_pred HHH------------HHHHHHHHHHCCCEEEECCHHHCCC
T ss_conf 899------------9998898875698798684775278