RPSBLAST alignment for GI: 254780921 and conserved domain: TIGR01214
>gnl|CDD|162255 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. Length = 287
Score = 270 bits (693), Expect = 2e-73
Identities = 113/290 (38%), Positives = 163/290 (56%), Gaps = 10/290 (3%)
Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60
+ L+ G NGQ+ + L + + ++ + +DL P+ + PD ++N AAY
Sbjct: 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAY 60
Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120
T VD AE +PE AF++NA +A+AA G ++ISTDYVFDG + P E TNP
Sbjct: 61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNP 120
Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179
LN+YG+SKLAGE+ + + N +I+RT+W+Y G NF+ +MLRLA E+ VV DQ
Sbjct: 121 LNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQI 180
Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239
G+PT A +AR I + L RG++H+ G SW +FA+ IF E+ G
Sbjct: 181 GSPTYAKDLARVIAALLQRLAR-----ARGVYHLANS-GQCSWYEFAQAIFEEAGADGLL 234
Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287
+V I +K+YP A RPAYS LD +KL T + W+E +R L
Sbjct: 235 LHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALRAYL 284