HHsearch alignment for GI: 254780922 and conserved domain: COG0448

>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism].
Probab=100.00  E-value=0  Score=316.70  Aligned_cols=238  Identities=27%  Similarity=0.452  Sum_probs=198.7

Q ss_pred             EEEECCCCCCCCCHHHCCCCCCEEEECCE-EHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC----C
Q ss_conf             79924888745533443898222247837-479999999997898689999777656431112222222211112----2
Q gi|254780922|r    3 GIVLAGGSGTRLRPLTDLLSKQMLPIYNK-PMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFS----Y   77 (292)
Q Consensus         3 aiIlAaG~GtRl~P~T~~~pK~Llpi~gk-plI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~----y   77 (292)
T Consensus         8 aiILaGg~G~rL~~LT~~RakpAVpFgGkYRiIDF~LSN~vNSGi~~I~VltQy~~~-SL~~Hi~~G~~w~l~~~~~~v~   86 (393)
T COG0448           8 AIILAGGRGSRLSPLTKDRAKPAVPFGGKYRIIDFALSNCVNSGIRRIGVLTQYKSH-SLNDHIGRGWPWDLDRKNGGVF   86 (393)
T ss_pred             EEEECCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCHH-HHHHHHHCCCCCCCCCCCCCEE
T ss_conf             999758987755224547503444427646898677000010388769999435536-7999862898656655558479


Q ss_pred             CC--C---CC---CCCCCCCCCCCCCCCCC--CCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCC--CCCCCCCC
Q ss_conf             23--3---33---22446852101112335--67521321443211110000111000001110012222--10001222
Q gi|254780922|r   78 IE--Q---LV---PAGLAQSYILGAEFIGD--SSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHV--QNPQRYGV  145 (292)
Q Consensus        78 ~~--q---~~---p~Gta~Ai~~a~~~i~~--~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v--~~p~~yGv  145 (292)
T Consensus        87 ilp~~~~~~~~~wy~Gtadai~Qnl~~i~~~~~eyvlIlsgDhIYkmDy~~ml~~H~~~gadiTv~~~~Vp~~eas~fGi  166 (393)
T COG0448          87 ILPAQQREGGERWYEGTADAIYQNLLIIRRSDPEYVLILSGDHIYKMDYSDMLDFHIESGADVTVAVKEVPREEASRFGV  166 (393)
T ss_pred             EECCHHCCCCCCCEECCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCC
T ss_conf             95711125787312044799997689997439888999528778944899999999981998799999879676002481


Q ss_pred             CCCCCCCCHHHCCCCCCC-CCCC-CCHHHHHHHHHHHH-HHHHHCCCCCCCCCCC-CCCCCHHCCCCCEEEEECCCCEEE
Q ss_conf             122221000100133333-2222-22024554100022-4322004675333333-343200000132046313541256
Q gi|254780922|r  146 VEVDSSNQAISIEEKPNN-PKSS-FAVTGIYFYDQEVV-NIARNIRPSARGELEI-TDVNSYYLDKGLLAVEFLREGSAW  221 (292)
Q Consensus       146 v~~d~~~~i~~i~EKP~~-~~sn-~a~~GiY~f~~~i~-~~~~~l~~s~rgE~ei-tD~~~~~l~~~~~~~~~~~~g~~W  221 (292)
T Consensus       167 m~~D~~~~i~~F~eKp~~~~~~~~laSMgiYIf~~~~L~~~L~~~~~~~~~~~DfgkdiIp~~~~~~~-v~AY~f~g-Yw  244 (393)
T COG0448         167 MNVDENGRIIEFVEKPADGPPSNSLASMGIYIFNTDLLKELLEEDAKDPNSSHDFGKDIIPKLLERGK-VYAYEFSG-YW  244 (393)
T ss_pred             EEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC-EEEEECCC-HH
T ss_conf             58879997887352667688665313556699829999999998741667733106778898875087-77874256-66


Q ss_pred             ECCCCHHHHHHHHHHHHHHHHH
Q ss_conf             3278457799999999998888
Q gi|254780922|r  222 FDAGTPESLLDTAVFVRNIENR  243 (292)
Q Consensus       222 ~D~Gt~e~l~~As~~i~~~e~~  243 (292)
T Consensus       245 ~dVgTi~syy~aNmdLl~~~~~  266 (393)
T COG0448         245 RDVGTIDSYYEANMDLLSPQPE  266 (393)
T ss_pred             HHCCCHHHHHHHHHHHCCCCCC
T ss_conf             5266399999843876289975