HHsearch alignment for GI: 254780922 and conserved domain: COG0448
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism].
Probab=100.00 E-value=0 Score=316.70 Aligned_cols=238 Identities=27% Similarity=0.452 Sum_probs=198.7
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCE-EHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC----C
Q ss_conf 79924888745533443898222247837-479999999997898689999777656431112222222211112----2
Q gi|254780922|r 3 GIVLAGGSGTRLRPLTDLLSKQMLPIYNK-PMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFS----Y 77 (292)
Q Consensus 3 aiIlAaG~GtRl~P~T~~~pK~Llpi~gk-plI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~----y 77 (292)
T Consensus 8 aiILaGg~G~rL~~LT~~RakpAVpFgGkYRiIDF~LSN~vNSGi~~I~VltQy~~~-SL~~Hi~~G~~w~l~~~~~~v~ 86 (393)
T COG0448 8 AIILAGGRGSRLSPLTKDRAKPAVPFGGKYRIIDFALSNCVNSGIRRIGVLTQYKSH-SLNDHIGRGWPWDLDRKNGGVF 86 (393)
T ss_pred EEEECCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCHH-HHHHHHHCCCCCCCCCCCCCEE
T ss_conf 999758987755224547503444427646898677000010388769999435536-7999862898656655558479
Q ss_pred CC--C---CC---CCCCCCCCCCCCCCCCC--CCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCC--CCCCCCCC
Q ss_conf 23--3---33---22446852101112335--67521321443211110000111000001110012222--10001222
Q gi|254780922|r 78 IE--Q---LV---PAGLAQSYILGAEFIGD--SSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHV--QNPQRYGV 145 (292)
Q Consensus 78 ~~--q---~~---p~Gta~Ai~~a~~~i~~--~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v--~~p~~yGv 145 (292)
T Consensus 87 ilp~~~~~~~~~wy~Gtadai~Qnl~~i~~~~~eyvlIlsgDhIYkmDy~~ml~~H~~~gadiTv~~~~Vp~~eas~fGi 166 (393)
T COG0448 87 ILPAQQREGGERWYEGTADAIYQNLLIIRRSDPEYVLILSGDHIYKMDYSDMLDFHIESGADVTVAVKEVPREEASRFGV 166 (393)
T ss_pred EECCHHCCCCCCCEECCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCC
T ss_conf 95711125787312044799997689997439888999528778944899999999981998799999879676002481
Q ss_pred CCCCCCCCHHHCCCCCCC-CCCC-CCHHHHHHHHHHHH-HHHHHCCCCCCCCCCC-CCCCCHHCCCCCEEEEECCCCEEE
Q ss_conf 122221000100133333-2222-22024554100022-4322004675333333-343200000132046313541256
Q gi|254780922|r 146 VEVDSSNQAISIEEKPNN-PKSS-FAVTGIYFYDQEVV-NIARNIRPSARGELEI-TDVNSYYLDKGLLAVEFLREGSAW 221 (292)
Q Consensus 146 v~~d~~~~i~~i~EKP~~-~~sn-~a~~GiY~f~~~i~-~~~~~l~~s~rgE~ei-tD~~~~~l~~~~~~~~~~~~g~~W 221 (292)
T Consensus 167 m~~D~~~~i~~F~eKp~~~~~~~~laSMgiYIf~~~~L~~~L~~~~~~~~~~~DfgkdiIp~~~~~~~-v~AY~f~g-Yw 244 (393)
T COG0448 167 MNVDENGRIIEFVEKPADGPPSNSLASMGIYIFNTDLLKELLEEDAKDPNSSHDFGKDIIPKLLERGK-VYAYEFSG-YW 244 (393)
T ss_pred EEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC-EEEEECCC-HH
T ss_conf 58879997887352667688665313556699829999999998741667733106778898875087-77874256-66
Q ss_pred ECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 3278457799999999998888
Q gi|254780922|r 222 FDAGTPESLLDTAVFVRNIENR 243 (292)
Q Consensus 222 ~D~Gt~e~l~~As~~i~~~e~~ 243 (292)
T Consensus 245 ~dVgTi~syy~aNmdLl~~~~~ 266 (393)
T COG0448 245 RDVGTIDSYYEANMDLLSPQPE 266 (393)
T ss_pred HHCCCHHHHHHHHHHHCCCCCC
T ss_conf 5266399999843876289975